View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10365_high_43 (Length: 306)
Name: NF10365_high_43
Description: NF10365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10365_high_43 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 2 - 282
Target Start/End: Original strand, 17734720 - 17735002
Alignment:
| Q |
2 |
tcaactgtacggaaacaagtacaacttctcgcaaccgttctttgttatgtgggacaaaatcttgggtacctacatgccatactcgttagagaagagagct |
101 |
Q |
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| T |
17734720 |
tcaactgtacggaaacaagtacaacttctcgcaaccgttctttgttatgtgggacaaaatcttgggtacccacatgccatactcgttagagaagagagct |
17734819 |
T |
|
| Q |
102 |
aatggtggttttgaatctagaccttgtaaagcttacaaggatgaatgagtaattaatatgagtaattaatctttttgcttgatgagtatttttaatgtgt |
201 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17734820 |
agtggtggttttgaatctagaccttgtaaagcttacaaggatgaatgagtaattaatatgagtaattaatctttttgcttgatgagtatttttaatgtgt |
17734919 |
T |
|
| Q |
202 |
accagtattg-nnnnnnnnncttcccacgttatgatgacgagcaccgagagtgatcgtg-ctgtatatacattacatatgatg |
282 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
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| T |
17734920 |
accagtattgttttttttttcttcccacgttatgatgacgagcaccgagagtgatcatgcctgtatatacattacatatgatg |
17735002 |
T |
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