View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10365_high_8 (Length: 389)

Name: NF10365_high_8
Description: NF10365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10365_high_8
NF10365_high_8
[»] scaffold0066 (1 HSPs)
scaffold0066 (22-389)||(1807-2175)
[»] chr8 (3 HSPs)
chr8 (15-378)||(23745926-23746289)
chr8 (205-380)||(14887355-14887530)
chr8 (205-380)||(21208636-21208811)
[»] scaffold0163 (1 HSPs)
scaffold0163 (15-386)||(19803-20165)
[»] chr3 (5 HSPs)
chr3 (27-386)||(40089382-40089732)
chr3 (102-386)||(2159231-2159515)
chr3 (205-380)||(6426807-6426982)
chr3 (205-380)||(16406109-16406284)
chr3 (205-380)||(8977346-8977521)
[»] chr1 (1 HSPs)
chr1 (15-386)||(20175248-20175610)
[»] chr5 (8 HSPs)
chr5 (15-171)||(21081583-21081737)
chr5 (278-389)||(21081471-21081582)
chr5 (205-377)||(20952361-20952533)
chr5 (205-386)||(27416631-27416812)
chr5 (205-380)||(18384240-18384415)
chr5 (205-380)||(26197991-26198166)
chr5 (314-386)||(24416794-24416866)
chr5 (314-386)||(30450342-30450414)
[»] scaffold0313 (2 HSPs)
scaffold0313 (205-380)||(14057-14232)
scaffold0313 (306-380)||(1-75)
[»] chr2 (5 HSPs)
chr2 (205-377)||(27165649-27165821)
chr2 (205-386)||(45018850-45019031)
chr2 (205-380)||(9509430-9509605)
chr2 (265-329)||(22906705-22906769)
chr2 (351-383)||(22103160-22103192)
[»] scaffold0611 (1 HSPs)
scaffold0611 (268-380)||(2509-2621)
[»] scaffold0145 (1 HSPs)
scaffold0145 (268-380)||(33567-33679)
[»] chr4 (5 HSPs)
chr4 (268-380)||(16269619-16269731)
chr4 (205-380)||(6696718-6696893)
chr4 (268-329)||(17155979-17156040)
chr4 (314-386)||(26816455-26816527)
chr4 (314-386)||(54695526-54695598)
[»] chr7 (6 HSPs)
chr7 (205-386)||(9540900-9541081)
chr7 (205-380)||(6538977-6539152)
chr7 (205-380)||(8505549-8505724)
chr7 (205-380)||(32102880-32103055)
chr7 (205-380)||(46501614-46501789)
chr7 (314-386)||(15179700-15179772)
[»] scaffold0003 (1 HSPs)
scaffold0003 (268-380)||(153135-153247)
[»] chr6 (4 HSPs)
chr6 (205-380)||(24927831-24928006)
chr6 (205-380)||(16902446-16902621)
chr6 (205-380)||(18164565-18164740)
chr6 (205-380)||(31361319-31361494)
[»] scaffold0141 (1 HSPs)
scaffold0141 (303-380)||(30481-30558)
[»] scaffold0049 (1 HSPs)
scaffold0049 (303-380)||(84254-84331)
[»] scaffold0764 (1 HSPs)
scaffold0764 (308-380)||(6545-6617)
[»] scaffold0254 (1 HSPs)
scaffold0254 (205-380)||(13644-13819)
[»] scaffold0028 (1 HSPs)
scaffold0028 (314-386)||(100040-100112)


Alignment Details
Target: scaffold0066 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 22 - 389
Target Start/End: Complemental strand, 2175 - 1807
Alignment:
Q  22 catcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaactgaaaat 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||| ||||    
T  2175 catcatcattctagtcatcaacaaacttctgatatatcaaaacaaaaggatgaagacgaaccaaattcatcttctctatccattcctccaagctggaaat 2076  T
Q  122 cagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaatgatttc 221  Q
    |||||| |||||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||  ||||||||  |||| ||| |  |||||||    
T  2075 cagttgttgatcatcctaaagagttaatcattggtgacactgctgataaagtaagaacaagatcatcataacaagacaaatcaaatatggctttgatttc 1976  T
Q  222 tctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttgg 321  Q
    || |||||||||||||||||| |||||||  |||| | |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||    
T  1975 tcaaatagagccaaaatccataaatgaagttatcattaatcaatcatggattgaagccatgactgaagagctttctcaatttgagagaaacaaagtatgg 1876  T
Q  322 aatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgt-tcagaaataaactgga 389  Q
    ||||| || ||| ||| |||| || ||| |||||||||||||| ||| |||| ||||||||| ||||||    
T  1875 aatttggtacctaaacatcaagacgaaaccatcattggaacaaaatgcgtgtgtcagaaatatactgga 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 378
Target Start/End: Complemental strand, 23746289 - 23745926
Alignment:
Q  15 agatggacatcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaac 114  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| | |    
T  23746289 agatgaacatcattattctagtcatcaacaaacttctgatatatcaaaacaaaaggatgaagacgaaccaaattcatcttctctatccattcgtccaagc 23746190  T
Q  115 tgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaa 214  Q
    || |||||||||| ||||||||||||||||||||||||| |||||  |||||| ||||| ||||||| ||||||||  ||| ||||  ||||||||   |    
T  23746189 tggaaatcagttgttgatcatcctaaagagttaatcatttgtgactctgctgataaagtaagaacaagatcatcataacaacacaaatcaaacatggtta 23746090  T
Q  215 tgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaa 314  Q
    ||||||||| |||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||    
T  23746089 tgatttctcaaatagagccaaaatccataaatgaagttatcactaatcaatcatggattgaagccatgacttaagagctttctcaatttgagagaaacaa 23745990  T
Q  315 agtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcaga 378  Q
    ||| |||||||  || |||||||||||| || ||| ||||||||||||||||||||||||||||    
T  23745989 agtctggaattcggtacctgaacctcaagacgaaaccatcattggaacaagatgggtgttcaga 23745926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 205 - 380
Target Start/End: Complemental strand, 14887530 - 14887355
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| ||   |||| | || |||||||| |||||||  || || |||||| | | ||    
T  14887530 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattcttgatgactcttggattgaggccatgaaggaggaactttctcagtttg 14887431  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| ||||| ||  |   |||| |||||| |||||||||||||||||||||||| |||||    
T  14887430 aaagaaacaaagtttggaacttagttccaaataatcaagacaaaagcatcattggaacaagatgggtgtttagaaa 14887355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Complemental strand, 21208811 - 21208636
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  21208811 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 21208712  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  21208711 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 21208636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 15 - 386
Target Start/End: Original strand, 19803 - 20165
Alignment:
Q  15 agatggacatcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaac 114  Q
    ||||| || ||||||||||| |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||          ||||||||| | |    
T  19803 agatgaacctcatcattctagtcatcaacaaacctctgatatatcaaaacaaaaggatgaagatgaaccagattcatt---------cattcctccaagc 19893  T
Q  115 tgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaa 214  Q
    || |||||||||| ||||||||| ||||| |||||||||||||||| |||||| ||||| ||||||| ||||||||  |||||||| ||||||||| | |    
T  19894 tggaaatcagttgttgatcatccaaaagaattaatcattggtgacactgctgataaagtaagaacaagatcatcattccaagacaaaacaaacatggcta 19993  T
Q  215 tgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaa 314  Q
    ||||||||| ||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  19994 tgatttctcaaatggagccaaaatccataaatgaagctatcattgatcaatcatggattgaagccatgactgaagagctttctcagtttgaaagaaacaa 20093  T
Q  315 agtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    ||| ||||||||||| |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  20094 agtctggaatttagtacctgaacctcgagacaaaaccatcattggaacaagatgggtgttcagaaataaact 20165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 184; Significance: 2e-99; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 27 - 386
Target Start/End: Complemental strand, 40089732 - 40089382
Alignment:
Q  27 tcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaactgaaaatcagtt 126  Q
    ||||||||  ||||||||||| |||||| |||||||||| ||| |||||||  ||||| ||||||          ||||||||| ||||| |||||||||    
T  40089732 tcattctagacatcaacaaacctctgatgtatcaaaacagaagaatgaagatgaaccaaattcatt---------cattcctccaaactggaaatcagtt 40089642  T
Q  127 gctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaatgatttctctaa 226  Q
    | ||||||||||||||| |||||||||||||||| |||||| ||||| ||||||| ||||||||  |||||||| ||||||||| | |||||||||| ||    
T  40089641 gttgatcatcctaaagaattaatcattggtgacactgctgataaagtaagaacaagatcatcattccaagacaaaacaaacatggctatgatttctcaaa 40089542  T
Q  227 tagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaattt 326  Q
    | |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||    
T  40089541 tggagccaaaatccataaatgaagctatcattgatcaatcatggattgaagccatgactgaagaactttctcaatttgaaagaaacaaagtctggaattt 40089442  T
Q  327 agtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    ||| |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  40089441 agtacctgaacctcaagacaaaactatcattggaacaagatgggtgttcagaaataaact 40089382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 102 - 386
Target Start/End: Original strand, 2159231 - 2159515
Alignment:
Q  102 cattcctccgaactgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaag 201  Q
    ||||||||| | ||| |||||||||| ||||||||||||||| |||||||||||||||| |||||| ||||| ||||||| ||||||||  ||||||||     
T  2159231 cattcctccaagctggaaatcagttgttgatcatcctaaagaattaatcattggtgacactgctgataaagtaagaacaagatcatcattccaagacaaa 2159330  T
Q  202 acaaacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaat 301  Q
    ||||||||| | ||||| |||| ||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| |||||| |||    
T  2159331 acaaacatggctatgatctctcaaatggagccaaaatccataaatgaagctatcattgatcaatcatggattgaagccatgaatgaagaactttctcaat 2159430  T
Q  302 atgaaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
     ||||||||||||||| ||||||||||| |||||||| | | |||||| ||||||||||||||||||||||||||||||||||||    
T  2159431 ttgaaagaaacaaagtctggaatttagtacctgaaccacgagacaaaaccatcattggaacaagatgggtgttcagaaataaact 2159515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 6426807 - 6426982
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  6426807 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 6426906  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| ||||||||    
T  6426907 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggttttcagaaa 6426982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 16406109 - 16406284
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  16406109 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 16406208  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| ||||||||    
T  16406209 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggttttcagaaa 16406284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 8977346 - 8977521
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  8977346 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 8977445  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  8977446 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 8977521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 4e-85; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 15 - 386
Target Start/End: Original strand, 20175248 - 20175610
Alignment:
Q  15 agatggacatcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaac 114  Q
    ||||| || |||||||||||  ||||||||||| ||||||||||||||||||||  |||||||  || || ||||||          ||||||||| | |    
T  20175248 agatgaacctcatcattctagacatcaacaaacatctgatatatcaaaacaaaaaaatgaagatgaaacaaattcata---------cattcctccaagc 20175338  T
Q  115 tgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaa 214  Q
    || |||||||||| ||||||||| ||| | |||||||||||||||| |||||| ||||| ||||||| ||||||||  |||||||| ||||||||| | |    
T  20175339 tggaaatcagttgttgatcatccaaaaaaattaatcattggtgacactgctgataaagtaagaacaagatcatcattccaagacaaaacaaacatggcta 20175438  T
Q  215 tgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaa 314  Q
    |||| |||| ||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||    
T  20175439 tgatatctcaaatggagccaaaatccataaatgaagctatcattgatcaatcatggattgaagccatgaatgaagaactttctcaatttgaaagaaacaa 20175538  T
Q  315 agtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    ||| ||||||||||| ||| |||| | | |||||| ||||||||||||||||||||||||||||||||||||    
T  20175539 agtctggaatttagtacctaaaccacgagacaaaaccatcattggaacaagatgggtgttcagaaataaact 20175610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 9e-46; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 21081737 - 21081583
Alignment:
Q  15 agatggacatcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaac 114  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||  | ||| | |    
T  21081737 agatgaacatcatcattctagtcatcaacaaacttctgatatatcaaaacaaaatgttgaagacgaaccagattcatcttctctatcca--cgtccaagc 21081640  T
Q  115 tgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaa 171  Q
    || |||| ||||| ||||||||||||||||||||||||| |||||| ||||||||||    
T  21081639 tggaaattagttgttgatcatcctaaagagttaatcatttgtgacactgctgacaaa 21081583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 278 - 389
Target Start/End: Complemental strand, 21081582 - 21081471
Alignment:
Q  278 ccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcag 377  Q
    ||||||||||| |||||||| ||| ||| || |||||||| |||||||| ||  ||||||||||| |||||| |||||||||||||||||||||||||||    
T  21081582 ccatgactgaatagctttctcaatttgagaggaacaaagtctggaatttggtatctgaacctcaagacaaaaccatcattggaacaagatgggtgttcag 21081483  T
Q  378 aaataaactgga 389  Q
    ||||||||||||    
T  21081482 aaataaactgga 21081471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 377
Target Start/End: Original strand, 20952361 - 20952533
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| | | || || || || || |||||||| |||| |||| | |||||||||||||||||||  ||||| |||||| | | ||    
T  20952361 aacatggcaatgatttctcaattggaacctaagtcaatcaatgaagccatcattgatgactcatggattgaagccatgaaggaagaactttctcagtttg 20952460  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcag 377  Q
    ||||||| ||||||||||||||||| ||  |   ||||| ||||| ||||||||||||||||||||| |||||    
T  20952461 aaagaaataaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcag 20952533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 205 - 386
Target Start/End: Original strand, 27416631 - 27416812
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||||||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  27416631 aacatgacaatgatctctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 27416730  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| |||||||||||||| |||||| |||||||| |||||    
T  27416731 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaacatgggttttcagaaacaaact 27416812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 18384240 - 18384415
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  18384240 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 18384339  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  18384340 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 18384415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Complemental strand, 26198166 - 26197991
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  26198166 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 26198067  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  26198066 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 26197991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 24416794 - 24416866
Alignment:
Q  314 aagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||    
T  24416794 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaact 24416866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 30450414 - 30450342
Alignment:
Q  314 aagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||    
T  30450414 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaact 30450342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 14057 - 14232
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| | | || || || || || |||||||| || | |||| | |||||||||||||||||||  ||||| |||||| ||| ||    
T  14057 aacatggcaatgatttctcaattggaacccaagtcaatcaatgaagccattattgatgactcatggattgaagccatgaaggaagaactttctcaatttg 14156  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||||||||| ||  |   ||||| ||||| ||||||||||||||||||||| ||||||||    
T  14157 aaagaaacaaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaa 14232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 1 - 75
Alignment:
Q  306 aagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    |||||||||||||||||||||||| ||  |   ||||| ||||| ||||||||||||||||||||| ||||||||    
T  1 aagaaacaaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaa 75  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 205 - 377
Target Start/End: Complemental strand, 27165821 - 27165649
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| | | || || || || || |||||||| |||| |||| | |||||||||||||||||||  ||||| |||||| | | ||    
T  27165821 aacatggcaatgatttctcaattggaacctaagtcaatcaatgaagccatcattgatgactcatggattgaagccatgaaggaagaactttctcagtttg 27165722  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcag 377  Q
    ||||||||||||||||||||||||| ||  |   ||||| ||||| ||||||||||||||||||||| |||||    
T  27165721 aaagaaacaaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcag 27165649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 205 - 386
Target Start/End: Original strand, 45018850 - 45019031
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  45018850 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagctattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 45018949  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    ||||||| |||||||||||  |||| ||  |   |||| |||||| ||||||||||||||||||||| |||||||| |||||    
T  45018950 aaagaaaaaaagtttggaacctagttccaaataatcaagacaaaaccatcattggaacaagatgggttttcagaaacaaact 45019031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Complemental strand, 9509605 - 9509430
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  9509605 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 9509506  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  9509505 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 9509430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 22906705 - 22906769
Alignment:
Q  265 tcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttagt 329  Q
    ||||||||||| |||||||  ||||| |||||| | |  ||||||||||||||||||||||||||    
T  22906705 tcatggattgaggccatgaaggaagaactttcttagttagaaagaaacaaagtttggaatttagt 22906769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 383
Target Start/End: Original strand, 22103160 - 22103192
Alignment:
Q  351 catcattggaacaagatgggtgttcagaaataa 383  Q
    |||||||||||||||||||||||| ||||||||    
T  22103160 catcattggaacaagatgggtgtttagaaataa 22103192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 380
Target Start/End: Original strand, 2509 - 2621
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||||| |||||| | | ||||||||||||||||||||| ||||| ||  ||  |||| |||||| |||||||||||||||||    
T  2509 tggattgaggccatgaaagaagaactttctcagtttgaaagaaacaaagtttggaacttagttccaaaaaatcaagacaaaaccatcattggaacaagat 2608  T
Q  368 gggtgttcagaaa 380  Q
    |||| ||||||||    
T  2609 gggttttcagaaa 2621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 380
Target Start/End: Complemental strand, 33679 - 33567
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||||| |||||| | | ||||||||||||||||||||| ||||| ||  ||  |||| |||||| |||||||||||||||||    
T  33679 tggattgaggccatgaaagaagaactttctcagtttgaaagaaacaaagtttggaacttagttccaaaaaatcaagacaaaaccatcattggaacaagat 33580  T
Q  368 gggtgttcagaaa 380  Q
    |||| ||||||||    
T  33579 gggttttcagaaa 33567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 380
Target Start/End: Original strand, 16269619 - 16269731
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||||| |||||| | | ||||||||||||||||||||| ||||| ||  ||  |||| |||||| |||||||||||||||||    
T  16269619 tggattgaggccatgaaagaagaactttctcagtttgaaagaaacaaagtttggaacttagttccaaaaaatcaagacaaaaccatcattggaacaagat 16269718  T
Q  368 gggtgttcagaaa 380  Q
    |||| ||||||||    
T  16269719 gggttttcagaaa 16269731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 6696718 - 6696893
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  6696718 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 6696817  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  6696818 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 6696893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 17155979 - 17156040
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttagt 329  Q
    |||||||| |||||||  ||||| |||||| | | ||||||||||||||||||||| |||||    
T  17155979 tggattgaggccatgaaagaagaactttctcagtttgaaagaaacaaagtttggaacttagt 17156040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 26816455 - 26816527
Alignment:
Q  314 aagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||    
T  26816455 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaact 26816527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 54695598 - 54695526
Alignment:
Q  314 aagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||    
T  54695598 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaact 54695526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 205 - 386
Target Start/End: Complemental strand, 9541081 - 9540900
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | ||||    
T  9541081 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagctattattgatgactcttggattgaggccatgaaggaagaactttctcagtatg 9540982  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    |||||||||||||||||||  |||| ||  |   | || |||||| ||||||||||||||||||| | |||||||| |||||    
T  9540981 aaagaaacaaagtttggaacctagttccaaataattaagacaaaaccatcattggaacaagatggattttcagaaacaaact 9540900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 6538977 - 6539152
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  6538977 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 6539076  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  6539077 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 6539152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 8505549 - 8505724
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| |||| |||||| | |||||||  ||||| |||||| | | ||    
T  8505549 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgaatcttggattaaggccatgaaggaagaactttctcagtttg 8505648  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||| ||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  8505649 aaagaaacagagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 8505724  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 32102880 - 32103055
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  32102880 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 32102979  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  32102980 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 32103055  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 46501614 - 46501789
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  46501614 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 46501713  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  46501714 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 46501789  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 15179700 - 15179772
Alignment:
Q  314 aagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||    
T  15179700 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaact 15179772  T

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Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 380
Target Start/End: Original strand, 153135 - 153247
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||||| |||||| ||| |||| ||||||||||||||||||||||  |  |   ||||| ||||| |||||||||||||||||    
T  153135 tggattgaggccatgaaggaagaactttctcaatttgaacgaaacaaagtttggaatttagttacaaataatcaaagcaaaaccatcattggaacaagat 153234  T
Q  368 gggtgttcagaaa 380  Q
    |||| || |||||    
T  153235 gggttttaagaaa 153247  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 380
Target Start/End: Complemental strand, 24928006 - 24927831
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  24928006 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 24927907  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| ||||||||    
T  24927906 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggttttcagaaa 24927831  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 16902446 - 16902621
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  16902446 aacatggcaatgatctctcaaatggaacccaagtcaataaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 16902545  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  16902546 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 16902621  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 18164565 - 18164740
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  18164565 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 18164664  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  18164665 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 18164740  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 31361319 - 31361494
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  31361319 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 31361418  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  31361419 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 31361494  T

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Target: scaffold0141 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 380
Target Start/End: Original strand, 30481 - 30558
Alignment:
Q  303 tgaaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||||| ||||| ||  |   ||||| ||||| ||||||||||||||||||||| ||||||||    
T  30481 tgaaagaaacaaagtttggaacttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaa 30558  T

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Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 380
Target Start/End: Complemental strand, 84331 - 84254
Alignment:
Q  303 tgaaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||||| ||||| ||  |   ||||| ||||| ||||||||||||||||||||| ||||||||    
T  84331 tgaaagaaacaaagtttggaacttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaa 84254  T

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Target: scaffold0764 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 6617 - 6545
Alignment:
Q  308 gaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    |||||||||||||||||||||| ||  |   ||||| ||||| ||||||||||||||||||||| ||||||||    
T  6617 gaaacaaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaa 6545  T

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Target: scaffold0254 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 380
Target Start/End: Complemental strand, 13819 - 13644
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  13819 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 13720  T
Q  305 aaagaaacaaagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaa 380  Q
    ||||||||||||||||||| || || ||  |   |||| | |||| ||||||||||||||||||||| || |||||    
T  13719 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaa 13644  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 100112 - 100040
Alignment:
Q  314 aagtttggaatttagtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaact 386  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||    
T  100112 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaact 100040  T

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