View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10367_high_1 (Length: 925)

Name: NF10367_high_1
Description: NF10367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10367_high_1
NF10367_high_1
[»] chr5 (34 HSPs)
chr5 (161-922)||(38816178-38816932)
chr5 (351-500)||(38821782-38821928)
chr5 (712-787)||(19820428-19820503)
chr5 (632-761)||(22423764-22423895)
chr5 (720-787)||(22013364-22013431)
chr5 (713-787)||(42469171-42469245)
chr5 (713-762)||(15410483-15410532)
chr5 (713-765)||(6326332-6326384)
chr5 (664-789)||(37328829-37328955)
chr5 (664-748)||(3966492-3966577)
chr5 (714-772)||(15382442-15382500)
chr5 (715-748)||(6035472-6035505)
chr5 (630-679)||(8420075-8420124)
chr5 (712-765)||(21191090-21191143)
chr5 (632-684)||(9929668-9929720)
chr5 (712-748)||(17123037-17123073)
chr5 (721-765)||(21522722-21522766)
chr5 (721-765)||(21533288-21533332)
chr5 (712-748)||(27144452-27144488)
chr5 (712-787)||(6247572-6247647)
chr5 (664-748)||(11685928-11686012)
chr5 (712-755)||(14674251-14674294)
chr5 (712-755)||(19579683-19579726)
chr5 (713-772)||(21137654-21137713)
chr5 (712-755)||(34879332-34879375)
chr5 (713-755)||(5873548-5873590)
chr5 (630-660)||(24906250-24906280)
chr5 (713-743)||(27932229-27932259)
chr5 (712-746)||(28588708-28588742)
chr5 (571-609)||(35665559-35665597)
chr5 (719-765)||(36642803-36642849)
chr5 (712-761)||(19552577-19552626)
chr5 (714-787)||(30135264-30135336)
chr5 (710-739)||(32766975-32767004)
[»] chr6 (34 HSPs)
chr6 (1-69)||(3175557-3175625)
chr6 (664-765)||(10294079-10294181)
chr6 (712-772)||(9027143-9027203)
chr6 (712-787)||(853893-853968)
chr6 (664-772)||(16766662-16766771)
chr6 (712-772)||(5000660-5000720)
chr6 (632-772)||(5732474-5732604)
chr6 (719-787)||(8365560-8365628)
chr6 (713-785)||(12696277-12696348)
chr6 (664-772)||(9107355-9107464)
chr6 (712-763)||(9629357-9629408)
chr6 (712-787)||(30866178-30866253)
chr6 (713-787)||(6389693-6389767)
chr6 (712-762)||(9658854-9658904)
chr6 (712-750)||(19040339-19040377)
chr6 (719-787)||(3398569-3398637)
chr6 (712-772)||(7938081-7938141)
chr6 (713-761)||(13851712-13851760)
chr6 (713-772)||(7977865-7977924)
chr6 (712-755)||(20371144-20371187)
chr6 (669-772)||(34073337-34073441)
chr6 (712-765)||(426548-426601)
chr6 (712-753)||(7265627-7265668)
chr6 (712-764)||(8777007-8777059)
chr6 (712-772)||(34595099-34595159)
chr6 (632-679)||(426478-426525)
chr6 (712-755)||(17841623-17841666)
chr6 (681-764)||(31579229-31579311)
chr6 (713-787)||(25038106-25038180)
chr6 (712-786)||(31959111-31959184)
chr6 (630-660)||(34073276-34073306)
chr6 (632-673)||(2117134-2117175)
chr6 (712-745)||(10842524-10842557)
chr6 (668-762)||(26562664-26562759)
[»] chr7 (34 HSPs)
chr7 (713-787)||(27944991-27945065)
chr7 (713-787)||(24105629-24105702)
chr7 (662-744)||(29787354-29787435)
chr7 (712-765)||(11722132-11722185)
chr7 (664-774)||(24339605-24339716)
chr7 (681-762)||(19206025-19206107)
chr7 (664-748)||(32308109-32308194)
chr7 (632-742)||(11700798-11700909)
chr7 (712-772)||(1433419-1433479)
chr7 (632-792)||(7328639-7328805)
chr7 (716-787)||(2034392-2034462)
chr7 (712-763)||(2425767-2425818)
chr7 (712-787)||(43027503-43027578)
chr7 (713-772)||(43249958-43250017)
chr7 (712-754)||(8046061-8046103)
chr7 (681-748)||(22484014-22484082)
chr7 (712-754)||(23191879-23191921)
chr7 (712-762)||(26733279-26733329)
chr7 (669-743)||(30731031-30731104)
chr7 (672-745)||(11072290-11072362)
chr7 (714-763)||(49107795-49107844)
chr7 (712-748)||(20549780-20549816)
chr7 (712-751)||(2948669-2948708)
chr7 (664-748)||(6630897-6630982)
chr7 (712-755)||(21828439-21828482)
chr7 (713-744)||(28155563-28155594)
chr7 (712-786)||(598160-598233)
chr7 (713-763)||(5235960-5236010)
chr7 (664-730)||(9933282-9933347)
chr7 (712-754)||(20545270-20545312)
chr7 (714-772)||(26329418-26329476)
chr7 (714-763)||(4017830-4017879)
chr7 (631-660)||(17852091-17852120)
chr7 (715-748)||(25791642-25791675)
[»] chr8 (19 HSPs)
chr8 (664-765)||(22651948-22652050)
chr8 (664-770)||(29510289-29510396)
chr8 (719-787)||(25192388-25192456)
chr8 (712-778)||(926822-926888)
chr8 (712-765)||(27213519-27213572)
chr8 (719-787)||(126390-126457)
chr8 (712-787)||(13436998-13437073)
chr8 (712-755)||(31109552-31109595)
chr8 (712-774)||(24362236-24362298)
chr8 (712-745)||(39954313-39954346)
chr8 (712-752)||(31236611-31236651)
chr8 (679-755)||(37283812-37283887)
chr8 (712-787)||(4298920-4298994)
chr8 (712-787)||(11944615-11944690)
chr8 (712-774)||(4673459-4673521)
chr8 (712-746)||(27101506-27101540)
chr8 (712-754)||(34897068-34897110)
chr8 (669-787)||(11927076-11927195)
chr8 (712-745)||(13844630-13844663)
[»] chr2 (27 HSPs)
chr2 (676-787)||(21782817-21782927)
chr2 (723-787)||(33519736-33519800)
chr2 (712-787)||(20539708-20539783)
chr2 (681-772)||(4332891-4332981)
chr2 (712-762)||(21616737-21616787)
chr2 (714-787)||(19536434-19536507)
chr2 (715-788)||(23717976-23718048)
chr2 (715-788)||(24105648-24105720)
chr2 (681-739)||(1327976-1328033)
chr2 (664-762)||(36409614-36409711)
chr2 (687-772)||(18276486-18276570)
chr2 (721-786)||(21624217-21624282)
chr2 (632-745)||(19573970-19574078)
chr2 (664-737)||(44860320-44860394)
chr2 (662-750)||(18420417-18420506)
chr2 (632-679)||(19536361-19536408)
chr2 (712-747)||(37411278-37411313)
chr2 (714-788)||(14996260-14996333)
chr2 (633-679)||(18255945-18255991)
chr2 (713-788)||(21374734-21374810)
chr2 (682-772)||(28412315-28412404)
chr2 (712-770)||(31018557-31018615)
chr2 (633-679)||(34691770-34691816)
chr2 (633-679)||(34714182-34714228)
chr2 (667-788)||(2331743-2331863)
chr2 (713-774)||(4142875-4142936)
chr2 (713-754)||(21091706-21091747)
[»] scaffold0306 (1 HSPs)
scaffold0306 (712-788)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (632-787)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (712-788)||(21902-21978)
[»] chr1 (32 HSPs)
chr1 (712-764)||(6427323-6427375)
chr1 (712-772)||(40917716-40917776)
chr1 (712-771)||(398799-398858)
chr1 (712-764)||(2896155-2896207)
chr1 (633-779)||(10572535-10572690)
chr1 (713-788)||(5376535-5376609)
chr1 (712-787)||(5927374-5927449)
chr1 (632-685)||(48547938-48547991)
chr1 (712-756)||(12443494-12443538)
chr1 (712-748)||(17831565-17831601)
chr1 (712-748)||(36878450-36878486)
chr1 (673-765)||(1486703-1486796)
chr1 (672-772)||(38503285-38503386)
chr1 (719-774)||(48040503-48040558)
chr1 (687-765)||(1262856-1262933)
chr1 (712-762)||(9709795-9709845)
chr1 (712-762)||(34298411-34298461)
chr1 (713-787)||(39130802-39130876)
chr1 (712-748)||(19562655-19562691)
chr1 (713-748)||(609493-609528)
chr1 (712-755)||(6415035-6415078)
chr1 (712-787)||(31014993-31015068)
chr1 (712-755)||(46348417-46348460)
chr1 (713-764)||(48450622-48450673)
chr1 (714-748)||(3490426-3490460)
chr1 (712-746)||(10475011-10475045)
chr1 (712-778)||(15641064-15641130)
chr1 (710-748)||(40285686-40285724)
chr1 (712-765)||(20157384-20157437)
chr1 (712-745)||(21530681-21530714)
chr1 (664-742)||(25361881-25361960)
chr1 (713-742)||(41877505-41877534)
[»] chr3 (26 HSPs)
chr3 (712-787)||(8383207-8383282)
chr3 (675-774)||(5441029-5441128)
chr3 (662-751)||(8039818-8039908)
chr3 (713-772)||(24205076-24205135)
chr3 (721-787)||(8842280-8842346)
chr3 (691-756)||(5407261-5407325)
chr3 (712-772)||(28917966-28918026)
chr3 (713-772)||(4991002-4991061)
chr3 (719-778)||(10335327-10335386)
chr3 (664-787)||(25064859-25064981)
chr3 (712-787)||(55401025-55401100)
chr3 (712-786)||(8587055-8587129)
chr3 (713-763)||(9800014-9800064)
chr3 (712-786)||(32429414-32429488)
chr3 (712-764)||(2620087-2620139)
chr3 (712-772)||(15796328-15796388)
chr3 (712-764)||(26492239-26492291)
chr3 (716-755)||(21720746-21720785)
chr3 (630-668)||(4466538-4466576)
chr3 (630-660)||(5440965-5440995)
chr3 (712-762)||(12674535-12674585)
chr3 (630-668)||(13807237-13807275)
chr3 (714-788)||(14223889-14223962)
chr3 (714-755)||(3865592-3865633)
chr3 (714-755)||(12703989-12704030)
chr3 (691-744)||(34307794-34307846)
[»] scaffold0168 (3 HSPs)
scaffold0168 (632-778)||(21002-21149)
scaffold0168 (632-693)||(21217-21278)
scaffold0168 (632-693)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (712-772)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (713-772)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (664-772)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (713-754)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (662-747)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (712-784)||(178853-178925)
scaffold0018 (713-754)||(192284-192325)
[»] chr4 (15 HSPs)
chr4 (712-772)||(23293020-23293080)
chr4 (713-748)||(35723420-35723455)
chr4 (714-748)||(17345451-17345485)
chr4 (713-770)||(847918-847975)
chr4 (712-765)||(36635296-36635349)
chr4 (713-772)||(24343472-24343531)
chr4 (664-770)||(30982863-30982967)
chr4 (713-755)||(7012048-7012090)
chr4 (712-793)||(7670625-7670709)
chr4 (712-762)||(20521883-20521933)
chr4 (714-772)||(20633450-20633508)
chr4 (632-755)||(30298928-30299048)
chr4 (632-755)||(30327796-30327916)
chr4 (712-746)||(40613441-40613475)
chr4 (714-783)||(28084475-28084544)
[»] scaffold0652 (1 HSPs)
scaffold0652 (712-772)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (711-787)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (713-772)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (712-755)||(51793-51836)
[»] scaffold0697 (1 HSPs)
scaffold0697 (712-745)||(1636-1669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (675-757)||(28830-28913)


Alignment Details
Target: chr5 (Bit Score: 716; Significance: 0; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 716; E-Value: 0
Query Start/End: Original strand, 161 - 922
Target Start/End: Original strand, 38816178 - 38816932
Alignment:
Q  161 tcagtgaaagaaaatgcaagaaaaggtatattgtatcctttgaacctcaatttctcacctacccaaagaaacctcatacaactatatacccttctctaac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816178 tcagtgaaagaaaatgcaagaaaaggtatattgtatcctttgaacctcaatttctcacctacccaaagaaacctcatacaactatatacccttctctaac 38816277  T
Q  261 agacaaagtcagtttaatttacataaggccgtgatgtataccaactgtaaccacaaaaagtagccaactgcaaaatctagacaaaatgtaaaaccctaag 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816278 agacaaagtcagtttaatttacataaggccgtgatgtataccaactgtaaccacaaaaagtagccaactgcaaaatctagacaaaatgtaaaaccctaag 38816377  T
Q  361 aacaaggtttaattaaacctaaacaacagcataccatttgtccctttctcacccacccaagcattcctccttcatctttagaagggcaaattgaatgttc 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816378 aacaaggtttaattaaacctaaacaacagcataccatttgtccctttctcacccacccaagcattcctccttcatctttagaagggcaaattgaatgttc 38816477  T
Q  461 cacagcaagatcactcaaatcttcacctgaacacacaacaagaaagccttagaaagaaacttcacaaataaatatctcccataaatatctagcaccgaga 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816478 cacagcaagatcactcaaatcttcacctgaacacacaacaagaaagccttagaaagaaacttcacaaataaatatctcccataaatatctagcaccgaga 38816577  T
Q  561 cttcatattaaaggtgtgtccagtgtccaacagatgtcagtctccaacactatcacgattcacgaatataactatgaagcacggacactcctcgaattag 660  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38816578 cttcatattaaaggtgtgtgcagtgtccaacagatgtcagtctccaacactatcacgattcacgaatataactatgaatcacggacactcctcgaattag 38816677  T
Q  661 ccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtg 760  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  38816678 ccatgtccgacaccgacaccacaccgacacataattatactgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg----- 38816772  T
Q  761 tccggagtccgtattcgtgcttcatagtatatggttaccgttcaattattctattttctcaaattattgcttcaattcaagcaatgatacaaacaatata 860  Q
      ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38816773 --cggagtccgtattagtgcttcatagtatatggttaccgttcaattattctattttctcaaattattgcttcaattcaaacaatgatacaaacaatata 38816870  T
Q  861 ccatattacattaattgaattgtaaaacccaactatttttaacctgcagcgactctctgttg 922  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816871 ccatattacattaattgaattgtaaaacccaactatttttaacctgcagcgactctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 351 - 500
Target Start/End: Original strand, 38821782 - 38821928
Alignment:
Q  351 aaaccctaagaacaaggtttaattaaacctaaacaacagcataccatttgtccctttctcacccacccaagcattcctccttcatctttagaagggcaaa 450  Q
    |||||||||||||||| |||||  ||| ||||||| ||   ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |    
T  38821782 aaaccctaagaacaagatttaagcaaatctaaacatca---taccatttgtccctttctcacccacccaagccttcctccttcttctttagatgggcaca 38821878  T
Q  451 ttgaatgttccacagcaagatcactcaaatcttcacctgaacacacaaca 500  Q
      ||||  |||||||||||||| |||||||||||||||| ||||||||||    
T  38821879 ccgaatagtccacagcaagatcgctcaaatcttcacctggacacacaaca 38821928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 712 - 787
Target Start/End: Original strand, 19820428 - 19820503
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  19820428 gattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 632 - 761
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatt 728  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | |||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  729 agcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    ||  ||||| | ||||||||||||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 720 - 787
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  720 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 713 - 787
Target Start/End: Complemental strand, 42469245 - 42469171
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||||||| | |||||||||||||| |||||||| ||||| ||| |||||| | ||||||||||||    
T  42469245 attttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 713 - 762
Target Start/End: Original strand, 15410483 - 15410532
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  15410483 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 713 - 765
Target Start/End: Original strand, 6326332 - 6326384
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    |||||||||||||| ||||| ||||||||||||||| |||||| |||||||||    
T  6326332 attttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 789
Target Start/End: Original strand, 37328829 - 37328955
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    |||||||||||||||| ||||||||||||  ||||| | |||| | | | ||||||  ||||||||| || ||||||| || ||||| |||||| |||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaatttt-gtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T
Q  762 ccggagtccgtattcgtgcttcatagta 789  Q
     ||| |||||| | ||||||||||||||    
T  37328928 tcggtgtccgtgtccgtgcttcatagta 37328955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 664 - 748
Target Start/End: Complemental strand, 3966577 - 3966492
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | ||||||||||||||||||||||||||||| |||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 714 - 772
Target Start/End: Complemental strand, 15382500 - 15382442
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 748
Target Start/End: Complemental strand, 6035505 - 6035472
Alignment:
Q  715 tttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    ||||||||||||||||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 630 - 679
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  630 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 679  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 765
Target Start/End: Original strand, 21191090 - 21191143
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  21191090 gattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccgg 21191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 632 - 684
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 684  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 748
Target Start/End: Complemental strand, 17123073 - 17123037
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17123073 gattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 765
Target Start/End: Complemental strand, 21522766 - 21522722
Alignment:
Q  721 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 765
Target Start/End: Complemental strand, 21533332 - 21533288
Alignment:
Q  721 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 748
Target Start/End: Complemental strand, 27144488 - 27144452
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    ||||| |||||||||||||||||||||||||||||||    
T  27144488 gatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 787
Target Start/End: Complemental strand, 6247647 - 6247572
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||| ||||||||||||  |||||||||||||||| | |||  ||||||||| ||||| || |||| |||||||    
T  6247647 gattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcatag 6247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 748
Target Start/End: Complemental strand, 11686012 - 11685928
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    ||||||||||||| || |||||||||||||  |||| | | || ||| |||| |||||||||||||||||||||||||| |||||||    
T  11686012 tgtccgacaccga-acgacaccgacacatataattacactaaattat-gcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 755
Target Start/End: Complemental strand, 14674294 - 14674251
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  14674294 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 755
Target Start/End: Complemental strand, 19579726 - 19579683
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||    
T  19579726 gattttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 772
Target Start/End: Complemental strand, 21137713 - 21137654
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||| ||||||| || ||||||||||||||| ||||||  |||||||| ||||||    
T  21137713 attttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 755
Target Start/End: Complemental strand, 34879375 - 34879332
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||    
T  34879375 gattttctcaaatttttagcggtgccggcgtgtccgtatccgtg 34879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 713 - 755
Target Start/End: Original strand, 5873548 - 5873590
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtg 5873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 660
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  630 aactatgaagcacggacactcctcgaattag 660  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 713 - 743
Target Start/End: Complemental strand, 27932259 - 27932229
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtg 743  Q
    |||||||||||||||||||||||||||||||    
T  27932259 attttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 746
Target Start/End: Original strand, 28588708 - 28588742
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtca 746  Q
    |||||||||||||||||| ||||||||||||||||    
T  28588708 gattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 571 - 609
Target Start/End: Original strand, 35665559 - 35665597
Alignment:
Q  571 aaggtgtgtccagtgtccaacagatgtcagtctccaaca 609  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  35665559 aaggtgtgtccagtgtccaacacatgtcagtttccaaca 35665597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 719 - 765
Target Start/End: Original strand, 36642803 - 36642849
Alignment:
Q  719 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 36642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 761
Target Start/End: Original strand, 19552577 - 19552626
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||    
T  19552577 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 787
Target Start/End: Complemental strand, 30135336 - 30135264
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||| ||||||||||||  ||||||||||||| ||||| ||| ||||||| | ||||||||  |||||||||||    
T  30135336 ttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc-gtgtccgtatatgtgcttcatag 30135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 739
Target Start/End: Original strand, 32766975 - 32767004
Alignment:
Q  710 gcgattttctcaaattattagcggtgtcgg 739  Q
    ||||||||||||||||||||||||||||||    
T  32766975 gcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 4e-28; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3175557 - 3175625
Alignment:
Q  1 ttaatcactaccacacaatccattatcaccctttctccaaccgcttggtctttaacctagtccttttgt 69  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3175557 ttaatcactgccacacaatccattatcaccctttctccaaccgcttggtctttaacctagtccttttgt 3175625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 664 - 765
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  762 ccgg 765  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 712 - 772
Target Start/End: Complemental strand, 9027203 - 9027143
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9027203 gattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 712 - 787
Target Start/End: Original strand, 853893 - 853968
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||    
T  853893 gattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 664 - 772
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||||| ||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  762 ccggagtccgt 772  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 712 - 772
Target Start/End: Original strand, 5000660 - 5000720
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  5000660 gattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 632 - 772
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 731  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | |||||||||||||||||| |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  732 ggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||||||||||| ||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 719 - 787
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  719 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||  |||||||||||||||| |||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 713 - 785
Target Start/End: Complemental strand, 12696348 - 12696277
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcat 785  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| ||||||| | |||||||| ||||||||||    
T  12696348 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 664 - 772
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | |||||| ||||||||||||| |||||||||||| ||| |||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  762 ccggagtccgt 772  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 712 - 763
Target Start/End: Complemental strand, 9629408 - 9629357
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 763  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  9629408 gattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 712 - 787
Target Start/End: Original strand, 30866178 - 30866253
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||||||||||||||| || ||||| || || ||| | ||||||| |||||||||||| ||||||||    
T  30866178 gattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 713 - 787
Target Start/End: Complemental strand, 6389767 - 6389693
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||||||| | |||||||||||| ||| |||||| ||||||||| ||| || | ||||||||||||    
T  6389767 attttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 712 - 762
Target Start/End: Complemental strand, 9658904 - 9658854
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  9658904 gattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 712 - 750
Target Start/End: Complemental strand, 19040377 - 19040339
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtat 750  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040377 gattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 719 - 787
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  719 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||| |||||||||||||||| |||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 772
Target Start/End: Complemental strand, 7938141 - 7938081
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || ||||||||| ||||||    
T  7938141 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 713 - 761
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 713 - 772
Target Start/End: Original strand, 7977865 - 7977924
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||| | ||||||    
T  7977865 attttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 712 - 755
Target Start/End: Original strand, 20371144 - 20371187
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  20371144 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 772
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  669 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 766  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | ||||||||||||||||||||| ||| ||| ||||||| |||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  767 gtccgt 772  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 765
Target Start/End: Original strand, 426548 - 426601
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  426548 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 753
Target Start/End: Original strand, 7265627 - 7265668
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccg 753  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  7265627 gattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 764
Target Start/End: Original strand, 8777007 - 8777059
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 764  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||    
T  8777007 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 772
Target Start/End: Complemental strand, 34595159 - 34595099
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||    
T  34595159 gattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 679
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 679  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 755
Target Start/End: Original strand, 17841623 - 17841666
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  17841623 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 764
Target Start/End: Original strand, 31579229 - 31579311
Alignment:
Q  681 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 764  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||| |||||| || ||| |||| ||| || ||||||||    
T  31579229 acaccgacacataattacactgaattat-gtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 713 - 787
Target Start/End: Original strand, 25038106 - 25038180
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||||||| |||||||  |||||||||||| ||| ||| | |   |||||||| ||||||||||||    
T  25038106 attttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgtgcttcatag 25038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 786
Target Start/End: Complemental strand, 31959184 - 31959111
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 786  Q
    |||||| ||||||||||||| ||| |||||||||||| | |||| | ||||| | |||||||| |||||||||||    
T  31959184 gattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtcc-gtgtccgtatccgtgcttcata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 660
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  630 aactatgaagcacggacactcctcgaattag 660  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 673
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacac 673  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 745
Target Start/End: Complemental strand, 10842557 - 10842524
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtc 745  Q
    |||||| |||||||||||||||||||||||||||    
T  10842557 gattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 762
Target Start/End: Complemental strand, 26562759 - 26562664
Alignment:
Q  668 cgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    |||||||||||| ||| |||||||||  |||| | |||| ||| | |||||||||||||| ||||| ||||||||||||| || | ||||| |||||    
T  26562759 cgacaccgacacgacatcgacacatataattacactgaattat-gtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtgcggtgtc 26562664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 4e-22; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 713 - 787
Target Start/End: Complemental strand, 27945065 - 27944991
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27945065 attttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 713 - 787
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 662 - 744
Target Start/End: Original strand, 29787354 - 29787435
Alignment:
Q  662 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 744  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | |||||||||||||||||||||||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 712 - 765
Target Start/End: Original strand, 11722132 - 11722185
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  11722132 gattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 664 - 774
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||| | ||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  762 ccggagtccgtat 774  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 681 - 762
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  681 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    |||||||||||||  ||||||||||| ||| | |||||||||||||||||||||||||||||||||  || |||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 664 - 748
Target Start/End: Complemental strand, 32308194 - 32308109
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||||||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 632 - 742
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatta 729  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | |||||| |||||||||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  730 gcggtgtcggcgt 742  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 772
Target Start/End: Complemental strand, 1433479 - 1433419
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||||||||||||||| |||||||||||||||| | |||||| ||||| ||| ||||||    
T  1433479 gattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 792
Target Start/End: Original strand, 7328639 - 7328805
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attataatgaaatatagcgattttctcaaat 724  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||| | | || ||| |  ||||||||||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattat-gttattttctcaaat 7328737  T
Q  725 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 792  Q
    ||||||| || ||| ||||| | | || ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328738 tattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 716 - 787
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  716 ttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 712 - 763
Target Start/End: Original strand, 2425767 - 2425818
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 763  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  2425767 gattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 712 - 787
Target Start/End: Original strand, 43027503 - 43027578
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||| ||||||||||||| | |||| ||||||||| |||||| ||||||| | ||||| || ||||||||||||    
T  43027503 gattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 713 - 772
Target Start/End: Complemental strand, 43250017 - 43249958
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||||||||||| | |||||||||||||||| |||||| | ||||||| ||||||    
T  43250017 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 754
Target Start/End: Original strand, 8046061 - 8046103
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 754  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  8046061 gattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 681 - 748
Target Start/End: Complemental strand, 22484082 - 22484014
Alignment:
Q  681 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||||||  |||||| |||| ||| || ||||||| ||||||||||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 754
Target Start/End: Complemental strand, 23191921 - 23191879
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 754  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  23191921 gattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 762
Target Start/End: Complemental strand, 26733329 - 26733279
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    |||||| |||||||||||||||||||| ||||||||| |||||| ||||||    
T  26733329 gattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 743
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  669 gacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtg 743  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | ||||||||||||||||| ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 745
Target Start/End: Complemental strand, 11072362 - 11072290
Alignment:
Q  672 accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 745  Q
    |||||||| ||||||||||||||||||| |||| ||||    |||| ||||||||||| |||||||||||||||    
T  11072362 accgacacgacaccgacacataattatattgaattata-tatttttttcaaattattatcggtgtcggcgtgtc 11072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 763
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 763  Q
    |||||||||||||||||||||||||| |||||||  |||||| |||||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 748
Target Start/End: Complemental strand, 20549816 - 20549780
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20549816 gattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 751
Target Start/End: Complemental strand, 2948708 - 2948669
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatc 751  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  2948708 gattttctaaaattatcagcggtgtcggcgtgtcagtatc 2948669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 748
Target Start/End: Original strand, 6630897 - 6630982
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    ||||||||||| |||| ||| |||||||||  |||| | |||| || || || |||||||||||||||| |||||||||||||||||    
T  6630897 tgtccgacaccaacacgacatcgacacatataattacactgaatta-agtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 755
Target Start/End: Original strand, 21828439 - 21828482
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  21828439 gattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 744
Target Start/End: Complemental strand, 28155594 - 28155563
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgt 744  Q
    ||||||||||||||||||||||||||||||||    
T  28155594 attttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 786
Target Start/End: Complemental strand, 598233 - 598160
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 786  Q
    |||||||| ||||||||||||||||||  |||||||| |||||| | |||| || ||||||  ||||||||||||    
T  598233 gattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgt-gtcgtgcttcata 598160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 713 - 763
Target Start/End: Complemental strand, 5236010 - 5235960
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 763  Q
    ||||||| |||||||||||||||||| ||||||||| || ||| |||||||    
T  5236010 attttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 664 - 730
Target Start/End: Complemental strand, 9933347 - 9933282
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattag 730  Q
    |||||||||||||||| |||| ||||||||| | || |||||||| | |||||| ||||||||||||    
T  9933347 tgtccgacaccgacacgacactgacacataagtttactgaaatat-gtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 754
Target Start/End: Original strand, 20545270 - 20545312
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 754  Q
    |||||| |||||||||||||||||| |||||||| ||||||||    
T  20545270 gattttttcaaattattagcggtgttggcgtgtccgtatccgt 20545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 772
Target Start/End: Original strand, 26329418 - 26329476
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||||||||||||| || ||||||||||||||| || ||| ||||||| | ||||||    
T  26329418 ttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgt 26329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 763
Target Start/End: Original strand, 4017830 - 4017879
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 763  Q
    |||||||||||||||| | ||||||||||||| || |||||| |||||||    
T  4017830 ttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtcc 4017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 660
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  631 actatgaagcacggacactcctcgaattag 660  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 748
Target Start/End: Complemental strand, 25791675 - 25791642
Alignment:
Q  715 tttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||| |||||||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagt 25791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 2e-18; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 664 - 765
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  762 ccgg 765  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 664 - 770
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  762 ccggagtcc 770  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 719 - 787
Target Start/End: Original strand, 25192388 - 25192456
Alignment:
Q  719 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 712 - 778
Target Start/End: Original strand, 926822 - 926888
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 778  Q
    |||||||||||||||||||  |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 712 - 765
Target Start/End: Complemental strand, 27213572 - 27213519
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  27213572 gattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 719 - 787
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  719 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||||||||||||||| |||||||||||||||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 712 - 787
Target Start/End: Original strand, 13436998 - 13437073
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || | ||||||| |||| | | ||||||||||||    
T  13436998 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 712 - 755
Target Start/End: Original strand, 31109552 - 31109595
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  31109552 gattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 774
Target Start/End: Original strand, 24362236 - 24362298
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 774  Q
    |||| ||||||||||||||||||||||||||||| || || ||| ||| ||||| ||||||||    
T  24362236 gattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 745
Target Start/End: Original strand, 39954313 - 39954346
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtc 745  Q
    ||||||||||||||||||||||||||||||||||    
T  39954313 gattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 752
Target Start/End: Original strand, 31236611 - 31236651
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatcc 752  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  31236611 gattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 679 - 755
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  679 ccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    ||||||||||||||||||| | |||| ||| | |||||||||| ||||||||||||| | || ||||||| ||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 787
Target Start/End: Original strand, 4298920 - 4298994
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||| ||||||||||| | |||||||||||| |||||| ||| ||||||| | |||| ||| ||||||||||||    
T  4298920 gattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc-gtgtccatatccgtgcttcatag 4298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 787
Target Start/End: Complemental strand, 11944690 - 11944615
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||| ||||||||||| | |||||||||||| || ||||||| |||||  || ||||||||  |||||||||||    
T  11944690 gattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtatctgtgcttcatag 11944615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 774
Target Start/End: Original strand, 4673459 - 4673521
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 774  Q
    |||||| ||||||||||| | |||||||||||||||| || ||| ||||||||  ||||||||    
T  4673459 gattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtat 4673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 746
Target Start/End: Complemental strand, 27101540 - 27101506
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtca 746  Q
    |||||| ||||||||||||||||||||||||||||    
T  27101540 gattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 754
Target Start/End: Complemental strand, 34897110 - 34897068
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 754  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  34897110 gattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 787
Target Start/End: Original strand, 11927076 - 11927195
Alignment:
Q  669 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 766  Q
    |||||| |||| |||||||||||||  |||| | |||| ||| | |||||| ||||||||||| | |||||||||| | || ||||||| |||||  ||     
T  11927076 gacaccaacacgacaccgacacatataattacactgaattat-gtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggt 11927174  T
Q  767 gtccgtattcgtgcttcatag 787  Q
    ||||||||  |||||||||||    
T  11927175 gtccgtatctgtgcttcatag 11927195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 745
Target Start/End: Original strand, 13844630 - 13844663
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtc 745  Q
    |||||||||||||||||||| |||||||||||||    
T  13844630 gattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 6e-18; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 676 - 787
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  676 acaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtatt 775  Q
    |||| |||||| |||||||||| | |||| ||| | |||||||||||||||||||| |||||||||||||||| |  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  776 cgtgcttcatag 787  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 723 - 787
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  723 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 712 - 787
Target Start/End: Original strand, 20539708 - 20539783
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||| ||||||||||||| |||||| ||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  20539708 gattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 681 - 772
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  681 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||||||||||| | |||| ||| | ||||||| |||||||||| | |||||||| ||| |||||| ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 712 - 762
Target Start/End: Complemental strand, 21616787 - 21616737
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  21616787 gattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 787
Target Start/End: Original strand, 19536434 - 19536507
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  19536434 ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 788
Target Start/End: Complemental strand, 23718048 - 23717976
Alignment:
Q  715 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 788  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 788
Target Start/End: Complemental strand, 24105720 - 24105648
Alignment:
Q  715 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 788  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 681 - 739
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  681 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcgg 739  Q
    ||||||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 664 - 762
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | |||||| ||||||||| |||||||||||| ||| |||||||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 687 - 772
Target Start/End: Complemental strand, 18276570 - 18276486
Alignment:
Q  687 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||||| | |||| || || ||||||||||||||||||||||||||||| | ||||| || ||  ||||||||| ||||||    
T  18276570 acacataattacactgaatta-agtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 786
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  721 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 786  Q
    ||||||||||| |||||||||||||||| || ||| ||||| ||| |||||||| || ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 632 - 745
Target Start/End: Complemental strand, 19574078 - 19573970
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 731  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||  ||||     ||||||| | |||| ||| |  ||||||| ||||||||| |    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacacgccacc----tataattacactgaattat-gttattttcttaaattattatc 19573984  T
Q  732 ggtgtcggcgtgtc 745  Q
    ||||||||||||||    
T  19573983 ggtgtcggcgtgtc 19573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 664 - 737
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtc 737  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| ||||||||||||||||||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 750
Target Start/End: Original strand, 18420417 - 18420506
Alignment:
Q  662 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtat 750  Q
    |||||||||||  ||||| ||||||||||  ||||||  | |||| ||| | |||||||||||||||||||| |||| |||||||||||||    
T  18420417 catgtccgacatggacacaacaccgacacttataattgcattgaattat-gtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 679
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 679  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 747
Target Start/End: Original strand, 37411278 - 37411313
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcag 747  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37411278 gattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 788
Target Start/End: Original strand, 14996260 - 14996333
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 788  Q
    |||| ||||||||||||| |||||||| ||||||| |||||| | ||| | | |||||||| |||||||||||||    
T  14996260 ttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgtatccgtgcttcatagt 14996333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 633 - 679
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  633 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 679  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 713 - 788
Target Start/End: Original strand, 21374734 - 21374810
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg--ccgtgtccggagtccgtattcgtgcttcatagt 788  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||  | |||||| | |||||||| |||||||||||||    
T  21374734 attttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgcttcatagt 21374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 682 - 772
Target Start/End: Complemental strand, 28412404 - 28412315
Alignment:
Q  682 caccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||||||||||||| | |||| ||| | |||||| ||||||||||| |||||| | ||||| ||| |||||| |||||| || ||||||    
T  28412404 caccgacacataattacactgaattat-gtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgt 28412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 770
Target Start/End: Complemental strand, 31018615 - 31018557
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 770  Q
    |||||||| |||||||||||||||| ||||||||||| ||| || ||| ||||| ||||    
T  31018615 gattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 633 - 679
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  633 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 679  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 633 - 679
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  633 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 679  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 788
Target Start/End: Complemental strand, 2331863 - 2331743
Alignment:
Q  667 ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 766  Q
    ||||||| ||||| |||||||||||||| || | |||| ||| | ||||||||||||||||||  |||||  |||||||| | |||||| || || ||      
T  2331863 ccgacactgacacgacaccgacacataaatacactgaattat-gtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcgcgttcgat 2331765  T
Q  767 gtccgtattcgtgcttcatagt 788  Q
    ||| || | |||||||||||||    
T  2331764 gtctgtgtccgtgcttcatagt 2331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 713 - 774
Target Start/End: Original strand, 4142875 - 4142936
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 774  Q
    ||||||| ||||| |||| ||||||||||||||||| |||| | ||||| ||| ||||||||    
T  4142875 attttcttaaattgttagtggtgtcggcgtgtcagtgtccgggtcgtgttcggtgtccgtat 4142936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 713 - 754
Target Start/End: Complemental strand, 21091747 - 21091706
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 754  Q
    ||||||| ||||||||||||||||||| |||||||| |||||    
T  21091747 attttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 712 - 788
Target Start/End: Complemental strand, 13425 - 13349
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 788  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 632 - 787
Target Start/End: Complemental strand, 20279 - 20122
Alignment:
Q  632 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaatta 726  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||||||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaatta 20183  T
Q  727 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||| |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  20182 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 712 - 788
Target Start/End: Original strand, 21902 - 21978
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 788  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 4e-16; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 712 - 764
Target Start/End: Complemental strand, 6427375 - 6427323
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 764  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  6427375 gattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 712 - 772
Target Start/End: Complemental strand, 40917776 - 40917716
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  40917776 gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 712 - 771
Target Start/End: Original strand, 398799 - 398858
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccg 771  Q
    |||||| |||||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  398799 gattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 712 - 764
Target Start/End: Original strand, 2896155 - 2896207
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 764  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  2896155 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 633 - 779
Target Start/End: Original strand, 10572535 - 10572690
Alignment:
Q  633 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaa 722  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  ||||| |  ||| ||| | |||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattat-gtgattttctcaa 10572633  T
Q  723 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtg 779  Q
    |||||||| ||||||||||||||||| | | || ||||||||| |||||||| ||||    
T  10572634 attattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 713 - 788
Target Start/End: Original strand, 5376535 - 5376609
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 788  Q
    ||||||| |||||||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||| |||||||    
T  5376535 attttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 712 - 787
Target Start/End: Original strand, 5927374 - 5927449
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||| ||||||||||||| ||||  |||||||||| |||||| ||||||||| |||||||| ||||||| ||||    
T  5927374 gattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatag 5927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 632 - 685
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 685  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 756
Target Start/End: Original strand, 12443494 - 12443538
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 756  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12443494 gattttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 748
Target Start/End: Original strand, 17831565 - 17831601
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831565 gattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 748
Target Start/End: Complemental strand, 36878486 - 36878450
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878486 gattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 673 - 765
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  673 ccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | |||||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 672 - 772
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  672 accgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtc 769  Q
    |||||||  |||||||||||||  |||| | |||||||||  |||||||||||||||||||||||||||| |||| ||| |||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  770 cgt 772  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 719 - 774
Target Start/End: Original strand, 48040503 - 48040558
Alignment:
Q  719 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 774  Q
    ||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 687 - 765
Target Start/End: Complemental strand, 1262933 - 1262856
Alignment:
Q  687 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    |||| |||||||| |||| ||| | |||||||||||||||||||| ||||||||||||| || | |||| |||||||||    
T  1262933 acacttaattatattgaattat-gtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 762
Target Start/End: Complemental strand, 9709845 - 9709795
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  9709845 gattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 762
Target Start/End: Complemental strand, 34298461 - 34298411
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| ||||||    
T  34298461 gattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 713 - 787
Target Start/End: Original strand, 39130802 - 39130876
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||| |||||||||   ||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  39130802 attttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 748
Target Start/End: Original strand, 19562655 - 19562691
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 748
Target Start/End: Original strand, 609493 - 609528
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||||||||||| |||||||||||||||||    
T  609493 attttctcaaattattagtggtgtcggcgtgtcagt 609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 755
Target Start/End: Original strand, 6415035 - 6415078
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  6415035 gattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 787
Target Start/End: Complemental strand, 31015068 - 31014993
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||||||||||||||||| |||| |||| ||||||  ||||| |||| |||| ||| || | ||||||||||||    
T  31015068 gattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgcttcatag 31014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 755
Target Start/End: Original strand, 46348417 - 46348460
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  46348417 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 764
Target Start/End: Original strand, 48450622 - 48450673
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 764  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||| ||||||||    
T  48450622 attttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 748
Target Start/End: Original strand, 3490426 - 3490460
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||||||||||| ||||||||||||||||    
T  3490426 ttttctcaaattattagcagtgtcggcgtgtcagt 3490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 746
Target Start/End: Original strand, 10475011 - 10475045
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtca 746  Q
    ||||||||||| |||||||||||||||||||||||    
T  10475011 gattttctcaagttattagcggtgtcggcgtgtca 10475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 778
Target Start/End: Original strand, 15641064 - 15641130
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 778  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||| | ||||||  |||||| |||||    
T  15641064 gattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgttcgt 15641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 748
Target Start/End: Original strand, 40285686 - 40285724
Alignment:
Q  710 gcgattttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  40285686 gcgattttctcaaattattagcggtgttggtgtgtcagt 40285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 765
Target Start/End: Original strand, 20157384 - 20157437
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    |||||||||| ||||||||||||||||  ||||||||  ||||| |||||||||    
T  20157384 gattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccgg 20157437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 745
Target Start/End: Complemental strand, 21530714 - 21530681
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtc 745  Q
    |||||||||||||||||| |||||||||||||||    
T  21530714 gattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 742
Target Start/End: Complemental strand, 25361960 - 25361881
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgt 742  Q
    |||||||||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||| || |||||||||||    
T  25361960 tgtccgacaccgacacgacactgacacatataattacactgaattat-gtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 713 - 742
Target Start/End: Original strand, 41877505 - 41877534
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgt 742  Q
    ||||||||||||||||||||||||||||||    
T  41877505 attttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 712 - 787
Target Start/End: Complemental strand, 8383282 - 8383207
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||| | |||||| | |||||| |||||    
T  8383282 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 675 - 774
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  675 gacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga-gtccgta 773  Q
    ||||| ||||||||||||||||  | |||| ||| | |||||||||||||| ||||||||| |||||||||||| || ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 662 - 751
Target Start/End: Original strand, 8039818 - 8039908
Alignment:
Q  662 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatc 751  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   |||||||||||||||||||||||| ||||||||| ||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 713 - 772
Target Start/End: Original strand, 24205076 - 24205135
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  24205076 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 721 - 787
Target Start/End: Complemental strand, 8842346 - 8842280
Alignment:
Q  721 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||||||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842346 aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 691 - 756
Target Start/End: Original strand, 5407261 - 5407325
Alignment:
Q  691 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 756  Q
    ||||||| |||||| ||| | |||||||||||||| ||||||||||||||||||| ||||||||||    
T  5407261 ataattacaatgaattat-gtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 772
Target Start/End: Complemental strand, 28918026 - 28917966
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918026 gattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 713 - 772
Target Start/End: Original strand, 4991002 - 4991061
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991002 attttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 719 - 778
Target Start/End: Original strand, 10335327 - 10335386
Alignment:
Q  719 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 778  Q
    ||||||||||||  |||||||||||||||| |||||| ||||||||| |||||| |||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 664 - 787
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  664 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 763  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | |||||| |||||| ||||||||||||||||||||| | || ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  764 ggagtccgtattcgtgcttcatag 787  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 712 - 787
Target Start/End: Complemental strand, 55401100 - 55401025
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||| ||||||||||||  |||||||||| ||||| |||||| ||| ||||| ||||||||  |||||||||||    
T  55401100 gattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 786
Target Start/End: Original strand, 8587055 - 8587129
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 786  Q
    |||||| |||||||| |||  |||||||||||||||| |||||| | ||||||| ||||||||  ||||||||||    
T  8587055 gattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 713 - 763
Target Start/End: Complemental strand, 9800064 - 9800014
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 763  Q
    |||||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  9800064 attttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 786
Target Start/End: Original strand, 32429414 - 32429488
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 786  Q
    |||||||| |||||||||||| |||||| |||||| | | ||||  |||||||| |||||||| |||||||||||    
T  32429414 gattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 764
Target Start/End: Original strand, 2620087 - 2620139
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 764  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| | ||||||||    
T  2620087 gattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 772
Target Start/End: Original strand, 15796328 - 15796388
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||| ||||||    
T  15796328 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 764
Target Start/End: Original strand, 26492239 - 26492291
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 764  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||    
T  26492239 gattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 755
Target Start/End: Complemental strand, 21720785 - 21720746
Alignment:
Q  716 ttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 668
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  630 aactatgaagcacggacactcctcgaattagccatgtcc 668  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 660
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  630 aactatgaagcacggacactcctcgaattag 660  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 762
Target Start/End: Original strand, 12674535 - 12674585
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    |||||||||||||||||||| ||||||| |||||| | |||||| ||||||    
T  12674535 gattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtc 12674585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 668
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  630 aactatgaagcacggacactcctcgaattagccatgtcc 668  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 788
Target Start/End: Original strand, 14223889 - 14223962
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 788  Q
    |||||||||||||||| | ||||||||||||| || || ||| ||||||| | ||| || |||||||||||||||    
T  14223889 ttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtcc-gtgtctgtgttcgtgcttcatagt 14223962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 755
Target Start/End: Original strand, 3865592 - 3865633
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||| ||||||||||||| |||||||||||||||| ||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 3865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 755
Target Start/End: Complemental strand, 12704030 - 12703989
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    ||||||||||||||||| ||||||||||||||  ||||||||    
T  12704030 ttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 691 - 744
Target Start/End: Original strand, 34307794 - 34307846
Alignment:
Q  691 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 744  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||| ||||||    
T  34307794 ataattacactgaaatat-gtgattttctcaaattattagcggtgtcagcgtgt 34307846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 778
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatta 729  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | |||||||||||  ||||||  ||  ||| | ||||||||||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  730 gcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 778  Q
     | ||||| || ||||||| |||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 693
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 693  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 693
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 693  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 712 - 772
Target Start/End: Complemental strand, 8823 - 8763
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||| ||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  8823 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 713 - 772
Target Start/End: Original strand, 225303 - 225362
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  225303 attttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 664 - 772
Target Start/End: Complemental strand, 241668 - 241559
Alignment:
Q  664 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | ||||||  |||||||||||| |||||||||||||||| |||||| |||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattat-gtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 241570  T
Q  762 ccggagtccgt 772  Q
    |||| ||||||    
T  241569 ccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 713 - 754
Target Start/End: Complemental strand, 92831 - 92790
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 754  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  92831 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 662 - 747
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  662 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcag 747  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | ||||||||||||||||| ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 784
Target Start/End: Original strand, 178853 - 178925
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 784  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||| |||  ||| |||||||||    
T  178853 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 713 - 754
Target Start/End: Original strand, 192284 - 192325
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 754  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000002; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 772
Target Start/End: Original strand, 23293020 - 23293080
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  23293020 gattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 713 - 748
Target Start/End: Original strand, 35723420 - 35723455
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 714 - 748
Target Start/End: Original strand, 17345451 - 17345485
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagt 748  Q
    |||||||||||||||||||||||||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagt 17345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 713 - 770
Target Start/End: Complemental strand, 847975 - 847918
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 770  Q
    |||||||||||||||||||||  ||||||||||||| || ||| ||||||||| ||||    
T  847975 attttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 765
Target Start/End: Complemental strand, 36635349 - 36635296
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 765  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| | |||||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 772
Target Start/End: Complemental strand, 24343531 - 24343472
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||||||||||||| | ||||||||||||| |  |||||| ||||||||| ||||||    
T  24343531 attttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 770
Target Start/End: Original strand, 30982863 - 30982967
Alignment:
Q  664 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 761  Q
    |||| ||||||||||| ||||||||||  ||||||| | |||||||| | ||||||||||||| |||||||||   |||||||| || |||||| ||| |    
T  30982863 tgtctgacaccgacacgacaccgacacttataattacactgaaatat-gtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtat 30982958  T
Q  762 ccggagtcc 770  Q
    |||| ||||    
T  30982959 ccggtgtcc 30982967  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 713 - 755
Target Start/End: Complemental strand, 7012090 - 7012048
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    ||||||||||||||||| ||||||||||||||| || ||||||    
T  7012090 attttctcaaattattatcggtgtcggcgtgtcggtgtccgtg 7012048  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 793
Target Start/End: Complemental strand, 7670709 - 7670625
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcg---tgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatg 793  Q
    |||||||||||| |||||||  ||||||||   ||||||| |||| | |||||||||  ||| ||||||||||||||| ||||||    
T  7670709 gattttctcaaactattagcaatgtcggcgacgtgtcagtttccgcgtcgtgtccggtatccatattcgtgcttcatactatatg 7670625  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 762
Target Start/End: Original strand, 20521883 - 20521933
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 762  Q
    |||||| ||||||||||| |||| ||||||||||||| |||||| ||||||    
T  20521883 gattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 772
Target Start/End: Complemental strand, 20633508 - 20633450
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||| |||||||||||||||||||| ||||||||| |||||  |||||| || ||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgt 20633450  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 632 - 755
Target Start/End: Complemental strand, 30299048 - 30298928
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 729  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30298954  T
Q  730 gcggtgtcggcgtgtcagtatccgtg 755  Q
    || |||||||||||||||| ||||||    
T  30298953 gctgtgtcggcgtgtcagtgtccgtg 30298928  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 632 - 755
Target Start/End: Complemental strand, 30327916 - 30327796
Alignment:
Q  632 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 729  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30327822  T
Q  730 gcggtgtcggcgtgtcagtatccgtg 755  Q
    || |||||||||||||||| ||||||    
T  30327821 gctgtgtcggcgtgtcagtgtccgtg 30327796  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 712 - 746
Target Start/End: Complemental strand, 40613475 - 40613441
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtca 746  Q
    |||||||||||| ||||||||||||||||||||||    
T  40613475 gattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 783
Target Start/End: Complemental strand, 28084544 - 28084475
Alignment:
Q  714 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttc 783  Q
    |||| ||||||| ||||| |||||||||||||||  || ||| ||||||||| ||||||||  |||||||    
T  28084544 ttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatctgtgcttc 28084475  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 772
Target Start/End: Original strand, 496 - 556
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    |||||| ||||||||||||| |||||||||| ||||| |||||| ||||| ||| ||||||    
T  496 gattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 711 - 787
Target Start/End: Original strand, 17903 - 17979
Alignment:
Q  711 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 787  Q
    |||||||||||||||||||||||||| |||||||  || |  ||  ||||||| | |||||||| ||||||||||||    
T  17903 cgattttctcaaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgtgcttcatag 17979  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 772
Target Start/End: Complemental strand, 3340 - 3281
Alignment:
Q  713 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 772  Q
    ||||||| ||||| |||||  ||||| |||||||||||||||| ||||||||| ||||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgt 3281  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 755
Target Start/End: Complemental strand, 51836 - 51793
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 755  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  51836 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

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Target: scaffold0697 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 745
Target Start/End: Complemental strand, 1669 - 1636
Alignment:
Q  712 gattttctcaaattattagcggtgtcggcgtgtc 745  Q
    |||||||||||||||||| |||||||||||||||    
T  1669 gattttctcaaattattaacggtgtcggcgtgtc 1636  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 757
Target Start/End: Complemental strand, 28913 - 28830
Alignment:
Q  675 gacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgcc 757  Q
    ||||| |||||||||||||  |||| | |||| ||| |||||||||| ||||||||| |||||||||||||| ||| | ||||||    
T  28913 gacacaacaccgacacatataattacattgaattat-gcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtgcc 28830  T

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