View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10368_low_2 (Length: 241)
Name: NF10368_low_2
Description: NF10368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10368_low_2 |
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Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 23452798 - 23453019
Alignment:
| Q |
4 |
acagacagatagaaattttcaaagttctaatattaagaaataaaaatttgtccatccaactcaacaattgttaggcaattaaaggttaattcttataact |
103 |
Q |
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| T |
23452798 |
acagacagatagaaattttcaaagttctaatattaagaaataaaaatttgtccatcaaactcaacaattgttaggcaattaaaggttaattcttataaca |
23452897 |
T |
|
| Q |
104 |
caatatgaacaattataaatctttacaatatacacagattctgtaaaatttattcatagattacaatcaattacaaccagctggttttcaaacnnnnnnn |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23452898 |
caatatgaacaattataaatctttacaatatacacagattctgtaaaatttattcatagattacaatcaattacaaccagctggttttcaaacaaaaaat |
23452997 |
T |
|
| Q |
204 |
tacaacctaattgtcttgcttc |
225 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
23452998 |
tacaacctaattgtcttgcttc |
23453019 |
T |
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