View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10369_high_4 (Length: 256)
Name: NF10369_high_4
Description: NF10369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10369_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 30289383 - 30289624
Alignment:
| Q |
1 |
ttggagaataagatttcattttgtgttaaa--tttgaaactgaggttggtcattaataaaggacgatggaattttcaatctataacacagtaacaaaaaa |
98 |
Q |
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| T |
30289383 |
ttggagaa-aagatttcattttgtgttaaaagtttgaaactgaggttggtcattaataaaggacgatggaattttcaatctataacacagtaacaaaaaa |
30289481 |
T |
|
| Q |
99 |
catgttagaacatgataatatcatcatcatgttagaagagtaatatgtttcaaaagattacataaacaatgtaaacaaataacaagggaatgggtagccc |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
30289482 |
catgttagaacatgataatatcatcatcatgttagaagagtaatatgtttcaaaagattacataaacaatgtaaacaaataacaagggaatgagtagccc |
30289581 |
T |
|
| Q |
199 |
ccgttttctatacattcttcttcaagagcacatcagacttcat |
241 |
Q |
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||||||||||||||| ||||||||||||||||||| ||||||| |
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| T |
30289582 |
ccgttttctatacatccttcttcaagagcacatcaaacttcat |
30289624 |
T |
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