View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10369_low_4 (Length: 258)

Name: NF10369_low_4
Description: NF10369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10369_low_4
NF10369_low_4
[»] chr3 (38 HSPs)
chr3 (137-207)||(30289250-30289319)
chr3 (1-44)||(11751216-11751259)
chr3 (1-44)||(28171060-28171103)
chr3 (1-44)||(40840173-40840216)
chr3 (4-44)||(8792813-8792853)
chr3 (1-44)||(46838808-46838850)
chr3 (1-44)||(47069011-47069054)
chr3 (1-38)||(3440736-3440773)
chr3 (1-38)||(9583504-9583541)
chr3 (3-44)||(41921511-41921551)
chr3 (4-44)||(11029668-11029708)
chr3 (4-44)||(39948530-39948570)
chr3 (1-44)||(2687564-2687606)
chr3 (1-44)||(3917771-3917813)
chr3 (1-44)||(4232258-4232300)
chr3 (1-44)||(4833190-4833232)
chr3 (1-44)||(6583316-6583358)
chr3 (1-44)||(8381084-8381126)
chr3 (1-44)||(8507937-8507979)
chr3 (1-44)||(11312595-11312637)
chr3 (1-44)||(12948815-12948857)
chr3 (1-44)||(13525174-13525216)
chr3 (1-44)||(17500932-17500974)
chr3 (1-44)||(24751758-24751800)
chr3 (1-44)||(29212146-29212188)
chr3 (1-44)||(32590977-32591019)
chr3 (1-44)||(37312533-37312575)
chr3 (1-44)||(46311524-46311566)
chr3 (1-44)||(48191099-48191141)
chr3 (1-44)||(50238921-50238963)
chr3 (5-44)||(54923490-54923529)
chr3 (2-44)||(33095982-33096024)
chr3 (1-38)||(1218452-1218488)
chr3 (3-44)||(23878951-23878991)
chr3 (3-44)||(31828404-31828445)
chr3 (3-44)||(32961061-32961101)
chr3 (4-44)||(7251623-7251663)
chr3 (4-44)||(24910372-24910411)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-44)||(160452-160495)
[»] chr7 (34 HSPs)
chr7 (1-44)||(46021512-46021555)
chr7 (8-44)||(12964581-12964617)
chr7 (1-44)||(964354-964397)
chr7 (1-44)||(1573922-1573964)
chr7 (1-44)||(1869820-1869863)
chr7 (1-44)||(4106559-4106601)
chr7 (1-44)||(31717302-31717344)
chr7 (1-44)||(33228704-33228747)
chr7 (1-44)||(40013268-40013311)
chr7 (1-44)||(9234328-9234372)
chr7 (4-44)||(34708678-34708718)
chr7 (1-44)||(2354878-2354920)
chr7 (1-44)||(3497598-3497640)
chr7 (1-44)||(4887594-4887636)
chr7 (1-44)||(6384599-6384641)
chr7 (1-44)||(10061097-10061139)
chr7 (1-44)||(10166875-10166917)
chr7 (1-44)||(23789494-23789537)
chr7 (1-44)||(27396395-27396437)
chr7 (1-44)||(33512802-33512844)
chr7 (1-44)||(35157165-35157207)
chr7 (1-44)||(38504604-38504647)
chr7 (1-44)||(45236935-45236977)
chr7 (5-44)||(46274952-46274991)
chr7 (1-44)||(47086381-47086424)
chr7 (1-44)||(48612522-48612564)
chr7 (1-44)||(48729765-48729807)
chr7 (2-44)||(43188534-43188576)
chr7 (1-45)||(6369532-6369575)
chr7 (1-45)||(6377997-6378040)
chr7 (1-45)||(21226069-21226112)
chr7 (1-44)||(40656189-40656233)
chr7 (4-44)||(43133187-43133227)
chr7 (1-45)||(47459420-47459463)
[»] chr6 (29 HSPs)
chr6 (1-44)||(16496733-16496776)
chr6 (1-38)||(9949232-9949269)
chr6 (1-44)||(1266823-1266866)
chr6 (5-44)||(2018847-2018886)
chr6 (1-44)||(31444371-31444414)
chr6 (3-44)||(10330809-10330850)
chr6 (1-41)||(7098971-7099010)
chr6 (1-44)||(1241600-1241642)
chr6 (1-44)||(2314680-2314722)
chr6 (1-44)||(4128950-4128992)
chr6 (1-44)||(7098811-7098853)
chr6 (1-44)||(8448223-8448265)
chr6 (1-44)||(8457027-8457069)
chr6 (1-44)||(8977159-8977202)
chr6 (1-44)||(12795100-12795142)
chr6 (1-44)||(17534604-17534646)
chr6 (1-44)||(18861848-18861890)
chr6 (1-44)||(31205264-31205306)
chr6 (1-44)||(32643809-32643851)
chr6 (2-44)||(8487635-8487676)
chr6 (6-44)||(15953239-15953276)
chr6 (3-44)||(4891013-4891053)
chr6 (1-38)||(8795490-8795526)
chr6 (1-38)||(31747067-31747103)
chr6 (5-41)||(5626145-5626180)
chr6 (1-45)||(8329639-8329682)
chr6 (4-44)||(13507394-13507433)
chr6 (4-44)||(28533445-28533485)
chr6 (4-44)||(32107919-32107958)
[»] chr5 (40 HSPs)
chr5 (1-44)||(8595568-8595611)
chr5 (1-44)||(21728665-21728708)
chr5 (1-44)||(23074725-23074768)
chr5 (1-44)||(1833400-1833443)
chr5 (5-44)||(22792195-22792234)
chr5 (1-44)||(30527986-30528029)
chr5 (1-44)||(30568326-30568369)
chr5 (1-44)||(40318866-40318909)
chr5 (1-44)||(41408631-41408674)
chr5 (5-45)||(12769210-12769249)
chr5 (1-37)||(34856592-34856628)
chr5 (1-44)||(1244262-1244304)
chr5 (1-44)||(1277442-1277485)
chr5 (1-44)||(2103031-2103073)
chr5 (1-44)||(4164964-4165006)
chr5 (1-44)||(4617847-4617889)
chr5 (1-44)||(6672246-6672288)
chr5 (1-44)||(9902582-9902624)
chr5 (1-44)||(10393583-10393625)
chr5 (1-44)||(12878199-12878241)
chr5 (1-44)||(17869205-17869247)
chr5 (1-44)||(18473919-18473961)
chr5 (1-44)||(23311254-23311296)
chr5 (1-44)||(25328385-25328427)
chr5 (1-44)||(28143313-28143355)
chr5 (1-44)||(29119611-29119653)
chr5 (1-44)||(33617101-33617143)
chr5 (1-44)||(36569284-36569326)
chr5 (1-44)||(36726994-36727036)
chr5 (1-44)||(36790396-36790439)
chr5 (1-44)||(39151007-39151049)
chr5 (1-44)||(41562463-41562505)
chr5 (2-44)||(26526517-26526559)
chr5 (6-44)||(27004051-27004088)
chr5 (2-44)||(40595962-40596003)
chr5 (7-44)||(41215322-41215359)
chr5 (5-45)||(12262874-12262914)
chr5 (1-41)||(15067221-15067261)
chr5 (1-41)||(29806575-29806614)
chr5 (4-44)||(39527937-39527976)
[»] chr4 (31 HSPs)
chr4 (1-44)||(24870601-24870644)
chr4 (1-45)||(28033196-28033239)
chr4 (1-44)||(13632094-13632137)
chr4 (2-44)||(35273388-35273430)
chr4 (4-44)||(21156039-21156079)
chr4 (1-44)||(1033530-1033572)
chr4 (1-44)||(5397021-5397063)
chr4 (1-44)||(9569480-9569522)
chr4 (1-44)||(9749163-9749206)
chr4 (1-44)||(12821170-12821212)
chr4 (1-44)||(23974723-23974765)
chr4 (1-44)||(30044665-30044707)
chr4 (1-44)||(31435999-31436041)
chr4 (1-44)||(33840624-33840667)
chr4 (1-44)||(35828279-35828321)
chr4 (1-44)||(37166143-37166185)
chr4 (1-44)||(42154219-42154261)
chr4 (1-44)||(42856568-42856610)
chr4 (1-44)||(46343333-46343376)
chr4 (1-44)||(46488198-46488240)
chr4 (1-44)||(47462117-47462159)
chr4 (1-44)||(49535890-49535932)
chr4 (1-44)||(49882790-49882832)
chr4 (1-44)||(54907973-54908015)
chr4 (5-44)||(55853399-55853438)
chr4 (2-44)||(1982566-1982607)
chr4 (2-44)||(37340189-37340231)
chr4 (3-44)||(26186220-26186261)
chr4 (3-44)||(50981781-50981822)
chr4 (1-41)||(26440975-26441014)
chr4 (4-44)||(31010029-31010068)
[»] chr1 (37 HSPs)
chr1 (1-44)||(270402-270445)
chr1 (2-44)||(7204590-7204632)
chr1 (3-44)||(17540159-17540200)
chr1 (4-44)||(49632559-49632599)
chr1 (1-44)||(10430420-10430463)
chr1 (1-44)||(17068157-17068199)
chr1 (1-44)||(26261374-26261416)
chr1 (1-44)||(37186898-37186941)
chr1 (1-44)||(39606409-39606452)
chr1 (4-44)||(3628659-3628699)
chr1 (5-44)||(5598306-5598344)
chr1 (1-44)||(10635494-10635536)
chr1 (5-44)||(15331147-15331185)
chr1 (5-44)||(19279937-19279975)
chr1 (1-44)||(19338259-19338301)
chr1 (5-44)||(23225375-23225414)
chr1 (1-44)||(24119661-24119703)
chr1 (1-44)||(28999379-28999421)
chr1 (1-44)||(29005095-29005137)
chr1 (1-44)||(40809294-40809336)
chr1 (1-44)||(40958655-40958697)
chr1 (5-44)||(41651078-41651116)
chr1 (1-44)||(42631066-42631108)
chr1 (1-44)||(43086552-43086594)
chr1 (1-44)||(43676105-43676147)
chr1 (1-44)||(45611542-45611585)
chr1 (1-44)||(48314172-48314214)
chr1 (1-44)||(48391961-48392003)
chr1 (1-44)||(49500866-49500908)
chr1 (2-44)||(34271102-34271144)
chr1 (3-44)||(4628047-4628088)
chr1 (3-44)||(16867475-16867516)
chr1 (3-44)||(38886472-38886512)
chr1 (1-41)||(20164154-20164193)
chr1 (1-44)||(21938948-21938989)
chr1 (1-41)||(27868285-27868325)
chr1 (1-41)||(43837095-43837135)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-44)||(39394-39436)
[»] chr8 (31 HSPs)
chr8 (1-44)||(1522697-1522740)
chr8 (1-44)||(7772131-7772173)
chr8 (1-44)||(11100369-11100411)
chr8 (1-44)||(25063344-25063387)
chr8 (1-44)||(25199051-25199093)
chr8 (1-44)||(26675562-26675604)
chr8 (1-44)||(26737976-26738018)
chr8 (1-44)||(36442768-36442811)
chr8 (3-44)||(11637635-11637676)
chr8 (3-44)||(40418132-40418173)
chr8 (7-44)||(42158563-42158600)
chr8 (4-44)||(14243704-14243743)
chr8 (1-45)||(37953787-37953830)
chr8 (1-44)||(40216783-40216827)
chr8 (1-44)||(2733621-2733663)
chr8 (1-44)||(4430816-4430858)
chr8 (1-44)||(4977115-4977157)
chr8 (1-44)||(6317305-6317347)
chr8 (2-41)||(16816833-16816872)
chr8 (1-44)||(24242666-24242709)
chr8 (1-44)||(26690699-26690741)
chr8 (1-44)||(27849823-27849866)
chr8 (1-44)||(33067469-33067511)
chr8 (1-44)||(37295131-37295173)
chr8 (1-44)||(38070562-38070604)
chr8 (1-44)||(41562447-41562489)
chr8 (1-44)||(44814868-44814910)
chr8 (5-41)||(3673928-3673964)
chr8 (1-41)||(11565007-11565047)
chr8 (4-44)||(16501653-16501693)
chr8 (1-41)||(25899263-25899303)
[»] chr2 (29 HSPs)
chr2 (5-44)||(11543884-11543923)
chr2 (1-44)||(12236126-12236168)
chr2 (1-44)||(39070024-39070066)
chr2 (3-44)||(19134599-19134640)
chr2 (1-44)||(2287390-2287432)
chr2 (1-44)||(7975095-7975137)
chr2 (1-44)||(10392650-10392692)
chr2 (1-44)||(15897219-15897261)
chr2 (1-44)||(20251566-20251608)
chr2 (1-44)||(22999079-22999122)
chr2 (1-44)||(23080179-23080221)
chr2 (1-44)||(23497593-23497635)
chr2 (1-44)||(25510383-25510425)
chr2 (1-44)||(31516286-31516328)
chr2 (1-44)||(32023257-32023299)
chr2 (1-44)||(34242532-34242574)
chr2 (1-44)||(34667049-34667091)
chr2 (1-44)||(35687867-35687909)
chr2 (1-44)||(36754822-36754864)
chr2 (1-44)||(38490481-38490523)
chr2 (1-44)||(42007296-42007338)
chr2 (1-44)||(42160338-42160380)
chr2 (1-44)||(43461415-43461457)
chr2 (1-43)||(12221225-12221267)
chr2 (3-44)||(33607048-33607088)
chr2 (1-42)||(39417449-39417490)
chr2 (4-44)||(32517902-32517942)
chr2 (4-44)||(34481755-34481794)
chr2 (1-45)||(38140695-38140738)
[»] scaffold0633 (1 HSPs)
scaffold0633 (5-44)||(3880-3918)
[»] scaffold0457 (1 HSPs)
scaffold0457 (1-44)||(6784-6826)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-44)||(9372-9414)
[»] scaffold0402 (1 HSPs)
scaffold0402 (1-44)||(1322-1364)
[»] scaffold0287 (1 HSPs)
scaffold0287 (1-44)||(1139-1181)
[»] scaffold0013 (1 HSPs)
scaffold0013 (3-44)||(90574-90614)
[»] scaffold0595 (1 HSPs)
scaffold0595 (1-45)||(349-392)


Alignment Details
Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 30289319 - 30289250
Alignment:
Q  137 ttataaaaatcgacaatatgatgaataacaaaatactgatttgttcacaaataaaagtagagtataatcta 207  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||||||    
T  30289319 ttataaaaatcgacaatatgatgaataaccaa-tacttatttgttcacaaacaaaagtagagtataatcta 30289250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11751259 - 11751216
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  11751259 ccggcctaacaatttcggcatttttgccagttgagctaggactt 11751216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28171060 - 28171103
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  28171060 ccggcctaacaatttcggcatttttgccagttgagctaggactt 28171103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40840216 - 40840173
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  40840216 ccggcctaacaatttcggcatttttgccagttgagctaggactt 40840173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 8792813 - 8792853
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  8792813 gcctaacaatttcggcatttttaccggttgagctaggactt 8792853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46838808 - 46838850
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  46838808 ccggcctaacaatttcggcattttt-ccagttgagctaggactt 46838850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47069054 - 47069011
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  47069054 ccggcctaacaatttcggcatttttgccagttgagctaagactt 47069011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3440773 - 3440736
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagcta 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  3440773 ccggcctaacaatttcggcatttttgccagttgagcta 3440736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9583504 - 9583541
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagcta 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9583504 ccggcctaacaatttcggcatttttgccagttgagcta 9583541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 41921551 - 41921511
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  41921551 ggcctaacaatttcggcatttt-accagttgagctaggactt 41921511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 11029708 - 11029668
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  11029708 gcctaacaatttcgacatttttgccagttgagctaggactt 11029668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 39948570 - 39948530
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  39948570 gcctaacaatttcgatatttttaccagttgagctaggactt 39948530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2687606 - 2687564
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  2687606 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 2687564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3917813 - 3917771
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  3917813 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 3917771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4232258 - 4232300
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  4232258 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 4232300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4833190 - 4833232
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  4833190 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 4833232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6583316 - 6583358
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  6583316 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 6583358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8381126 - 8381084
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  8381126 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 8381084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8507979 - 8507937
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  8507979 ccggcctaacaatttcggcattttt-ccagttgagctaagactt 8507937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11312637 - 11312595
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  11312637 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 11312595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12948857 - 12948815
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  12948857 ccggcctaacaatttcgtcatttt-accagttgagctaggactt 12948815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13525216 - 13525174
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  13525216 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 13525174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17500974 - 17500932
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||    
T  17500974 ccggcctaacaatttcggcattttt-ccagttgagttaggactt 17500932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24751800 - 24751758
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  24751800 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 24751758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29212146 - 29212188
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  29212146 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 29212188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32591019 - 32590977
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  32591019 ccggcctaacaatttcgacatttt-accagttgagctaggactt 32590977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37312575 - 37312533
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  37312575 ccggcctaacaatttcggtatttt-accagttgagctaggactt 37312533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46311524 - 46311566
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  46311524 ccggcctaacaatttcgacatttt-accagttgagctaggactt 46311566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48191141 - 48191099
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  48191141 ccggcctaacaatttcggca-ttttagcagttgagctaggactt 48191099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50238921 - 50238963
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  50238921 ccggcctaacaatttcgacatttt-accagttgagctaggactt 50238963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 54923529 - 54923490
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  54923529 cctaacaatttcgacatttttaccagttgagttaggactt 54923490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 33096024 - 33095982
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||    
T  33096024 cggcctaacaatttcgtcatttttgccagttgagttaggactt 33095982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1218452 - 1218488
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagcta 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  1218452 ccggcctaacaatttcggca-ttttaccagttgagcta 1218488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 23878991 - 23878951
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  23878991 ggcctaacaatttaggcattttt-ccagttgagctaggactt 23878951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 31828445 - 31828404
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||  ||||||| ||||||||    
T  31828445 ggcctaacaatttcggcatttttataagttgagttaggactt 31828404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 32961061 - 32961101
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  32961061 ggcctaacaatttcggca-ttttgccagttgagctaggactt 32961101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 7251623 - 7251663
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||  |||||||| ||||||||    
T  7251623 gcctaacaatttcggcatttttgtcagttgagttaggactt 7251663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 24910372 - 24910411
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  24910372 gcctaacaatttcggca-ttttgccagttgagctaggactt 24910411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 160495 - 160452
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  160495 ccggcctaacaatttcggcatttttaccagttgagctaggactt 160452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46021512 - 46021555
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  46021512 ccggcctaacaatttcggcatttttatcagttgagctaggactt 46021555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 12964581 - 12964617
Alignment:
Q  8 aacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||||||||||||||||    
T  12964581 aacaatttcggcatttttaccagttgagctaggactt 12964617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 964354 - 964397
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  964354 ccggcctaataatttcggcatttttaccaattgagctaggactt 964397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1573922 - 1573964
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  1573922 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 1573964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1869863 - 1869820
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||    
T  1869863 ccggcctaacaatatcggcatttttgccagttgagctaggactt 1869820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4106601 - 4106559
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  4106601 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 4106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31717344 - 31717302
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  31717344 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 31717302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33228747 - 33228704
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||    
T  33228747 ccggcctaacaatttcgacatttttgccagttgagctaggactt 33228704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40013311 - 40013268
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||||  |||||||||||||||||    
T  40013311 ccggcctaacaatttcggcatttttgtcagttgagctaggactt 40013268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9234328 - 9234372
Alignment:
Q  1 ccggcctaacaatttcggca-tttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  9234328 ccggcctaacaatttcggcatttttttccagttgagctaggactt 9234372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 34708718 - 34708678
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  34708718 gcctaacaatatcggcatttttgccagttgagctaggactt 34708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2354878 - 2354920
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  2354878 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 2354920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3497598 - 3497640
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  3497598 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 3497640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4887594 - 4887636
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  4887594 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 4887636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6384599 - 6384641
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  6384599 ccggcctaacaatttcggtatttt-accagttgagctaggactt 6384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10061097 - 10061139
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  10061097 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 10061139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10166917 - 10166875
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  10166917 ccggcctaacaatttcggca-ttttatcagttgagctaggactt 10166875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23789494 - 23789537
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||    
T  23789494 ccggcctaacaatatcggcatttttgccagttgaactaggactt 23789537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27396395 - 27396437
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  27396395 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 27396437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33512844 - 33512802
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  33512844 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 33512802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35157165 - 35157207
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  35157165 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 35157207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38504604 - 38504647
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  38504604 ccggcctaaaaatttcggcatttttgccaattgagctaggactt 38504647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45236977 - 45236935
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  45236977 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 45236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 46274991 - 46274952
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  46274991 cctaacaatttcggcatttttaccggttgagctagaactt 46274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47086381 - 47086424
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||||  |||||||||||||||||    
T  47086381 ccggcctaacaatttcgacatttttgtcagttgagctaggactt 47086424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48612564 - 48612522
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  48612564 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 48612522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48729765 - 48729807
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  48729765 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 48729807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 43188576 - 43188534
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  43188576 cggcctaacaatttcggcatttttgccacttgagctagtactt 43188534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6369575 - 6369532
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||    
T  6369575 ccggcctaacaatttcggca-ttttaccagttgagttagaacttt 6369532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6378040 - 6377997
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||    
T  6378040 ccggcctaacaatttcggca-ttttaccagttgagttagaacttt 6377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21226112 - 21226069
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||    
T  21226112 ccggcctaacaatttcggca-ttttgccagttgagataggacttt 21226069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40656189 - 40656233
Alignment:
Q  1 ccggcctaacaatttcggca-tttttaccagttgagctaggactt 44  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||    
T  40656189 ccggcctaacaatatcggcattttttgccagttgagctaggactt 40656233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 43133187 - 43133227
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||| |||||| ||| ||||||||||||||    
T  43133187 gcctaacaatttcggtatttttgccatttgagctaggactt 43133227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47459463 - 47459420
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||    
T  47459463 ccggcctaacaatttcgacatttt-accagttgagctatgacttt 47459420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16496733 - 16496776
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  16496733 ccggcctaacaatttcggcatttttgccagttgagctaggactt 16496776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9949232 - 9949269
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagcta 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9949232 ccggcctaacaatttcggcatttttaccagttgagcta 9949269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1266823 - 1266866
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||||||| |||||| ||||||||    
T  1266823 ccggcctaacaatttcggcatttttaccggttgagttaggactt 1266866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 2018847 - 2018886
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  2018847 cctaacaatttcgacatttttaccagttgagctaggactt 2018886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31444371 - 31444414
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| || |||||||||||||||    
T  31444371 ccggcctaacaatttcggcatttttgccggttgagctaggactt 31444414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 10330850 - 10330809
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  10330850 ggcctaacaattttggcatttttgccagttgagctaggactt 10330809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7099010 - 7098971
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  7099010 ccggcctaacaatttcggcattttt-ccagttgagctagga 7098971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1241642 - 1241600
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  1241642 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 1241600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2314680 - 2314722
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  2314680 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 2314722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4128992 - 4128950
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  4128992 ccggcctaacaatttcggtatttt-accagttgagctaggactt 4128950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7098853 - 7098811
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  7098853 ccggcctaacaatttcgacatttt-accagttgagctaggactt 7098811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8448223 - 8448265
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  8448223 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 8448265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8457027 - 8457069
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  8457027 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 8457069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8977202 - 8977159
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||    
T  8977202 ccggcctaacaatttgggcatttttgccagttgagctaagactt 8977159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12795100 - 12795142
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||| ||||||||||||||||    
T  12795100 ccggcctaacaatttcggca-ttttactagttgagctaggactt 12795142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17534604 - 17534646
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  17534604 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 17534646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18861848 - 18861890
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  18861848 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 18861890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31205264 - 31205306
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  31205264 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 31205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32643809 - 32643851
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||| ||||||||    
T  32643809 ccggcctaacaatttcggca-ttttaccagttgagttaggactt 32643851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 8487635 - 8487676
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  8487635 cggcctaacaatttcggca-ttttaccagttgagctaagactt 8487676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 15953276 - 15953239
Alignment:
Q  6 ctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  15953276 ctaacaatttcggcatttt-accagttgagctaggactt 15953239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 4891053 - 4891013
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  4891053 ggcctaacaatttcggcattttt-ccagttgagctaagactt 4891013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8795490 - 8795526
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagcta 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  8795490 ccggcctaacaatttcggcattttt-ccagttgagcta 8795526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31747067 - 31747103
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagcta 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  31747067 ccggcctaacaatttcggca-ttttaccagttgagcta 31747103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 5626145 - 5626180
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctagga 41  Q
    ||||||||||||||||||||| |||||||||||||||    
T  5626145 cctaacaatttcggcattttt-ccagttgagctagga 5626180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8329639 - 8329682
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    |||||||||||||||||||| | || |||||||||||||||||||    
T  8329639 ccggcctaacaatttcggca-tattgccagttgagctaggacttt 8329682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 13507394 - 13507433
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  13507394 gcctaacaatttcggca-ttttcccagttgagctaggactt 13507433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 28533485 - 28533445
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||| ||| |||| |||||||||    
T  28533485 gcctaacaatttcggcatttttgccaattgaactaggactt 28533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 32107919 - 32107958
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  32107919 gcctaacaatttcggca-ttttgccagttgagctaggactt 32107958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8595568 - 8595611
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  8595568 ccggcctaacaatttcggcatttttgccagttgagctaggactt 8595611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21728708 - 21728665
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  21728708 ccggcctaacaatttcggcatttttgccagttgagctaggactt 21728665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23074725 - 23074768
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  23074725 ccggcctaacaatttcggcatttttgccagttgagctaggactt 23074768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1833400 - 1833443
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  1833400 ccggcctaacaatttcggcatttttgccagttgagctatgactt 1833443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 22792195 - 22792234
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  22792195 cctaacaatttcggcatttttgccagttgagctaggactt 22792234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30528029 - 30527986
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  30528029 ccggcctaacaatttcggcattttcaccggttgagctaggactt 30527986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30568369 - 30568326
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  30568369 ccggcctaacaatttcggcattttcaccggttgagctaggactt 30568326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40318866 - 40318909
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  40318866 ccggcctaacaatttcggcatttttgccagttgagctatgactt 40318909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41408674 - 41408631
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  41408674 ccggcctaacaatttcggcatttttgccagttgagctatgactt 41408631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 12769210 - 12769249
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  12769210 cctaacaatttcggcatttt-accagttgagctaggacttt 12769249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34856628 - 34856592
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagct 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34856628 ccggcctaacaatttcggcatttttgccagttgagct 34856592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1244262 - 1244304
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  1244262 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 1244304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1277485 - 1277442
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||||  ||| |||||||||||||    
T  1277485 ccggcctaacaatttcggcatttttggcagctgagctaggactt 1277442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2103073 - 2103031
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  2103073 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 2103031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4165006 - 4164964
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  4165006 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 4164964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4617847 - 4617889
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  4617847 ccggcctaacaatttcgacatttt-accagttgagctaggactt 4617889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6672288 - 6672246
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  6672288 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 6672246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9902582 - 9902624
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  9902582 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 9902624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10393583 - 10393625
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  10393583 ccggcctaataatttcggcattttt-ccagttgagctaggactt 10393625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12878199 - 12878241
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  12878199 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 12878241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17869205 - 17869247
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  17869205 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 17869247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18473961 - 18473919
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  18473961 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 18473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23311254 - 23311296
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  23311254 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 23311296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25328385 - 25328427
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  25328385 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 25328427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28143313 - 28143355
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  28143313 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 28143355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29119653 - 29119611
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  29119653 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 29119611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33617143 - 33617101
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  33617143 ccggcctaacaatgtcggcatttt-accagttgagctaggactt 33617101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36569326 - 36569284
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  36569326 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 36569284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36727036 - 36726994
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  36727036 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 36726994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36790396 - 36790439
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||    
T  36790396 ccggcctaataatttcggcatttttgccagttaagctaggactt 36790439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39151007 - 39151049
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  39151007 ccggcctaacaatttcgacatttt-accagttgagctaggactt 39151049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41562505 - 41562463
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  41562505 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 41562463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 26526559 - 26526517
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||| |||||    
T  26526559 cggcctaacaatttcggtatttttgccagttgagctaagactt 26526517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 27004051 - 27004088
Alignment:
Q  6 ctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  27004051 ctaacaatttcggcatttt-accagttgagctaggactt 27004088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 40596003 - 40595962
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  40596003 cggcctaacaatttcggca-ttttgccagttgagctaggactt 40595962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 41215322 - 41215359
Alignment:
Q  7 taacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  41215322 taacaatttcagcatttttacctgttgagctaggactt 41215359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 12262914 - 12262874
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    ||||||||||||||||||||| || ||||| ||||||||||    
T  12262914 cctaacaatttcggcatttttgccggttgaactaggacttt 12262874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15067221 - 15067261
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    ||||||||||||||||| ||||||| ||| |||||||||||    
T  15067221 ccggcctaacaatttcgacattttttccaattgagctagga 15067261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29806614 - 29806575
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  29806614 ccggcctaacaattttggcatttt-accagttgagctagga 29806575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 39527976 - 39527937
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  39527976 gcctaacaatttcggca-ttttaccagttgaactaggactt 39527937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24870644 - 24870601
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  24870644 ccggcctaacaatttcggcatttttgccagttgagctaggactt 24870601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28033239 - 28033196
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  28033239 ccggcctaacaatttcggcatttt-accagttgagctaggacttt 28033196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13632137 - 13632094
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||    
T  13632137 ccggcctaacaatttcgacatttttgccagttgagctaggactt 13632094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 35273388 - 35273430
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  35273388 cggcctaacaatttcgacatttttgccagttgagctaggactt 35273430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 21156039 - 21156079
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  21156039 gcctagcaatttcggcatttttgccagttgagctaggactt 21156079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1033530 - 1033572
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  1033530 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 1033572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5397021 - 5397063
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  5397021 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 5397063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9569522 - 9569480
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  9569522 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 9569480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9749163 - 9749206
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||    
T  9749163 ccggcataacaatttcggcatttttaccaattgaactaggactt 9749206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12821212 - 12821170
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  12821212 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 12821170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23974723 - 23974765
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  23974723 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 23974765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30044665 - 30044707
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  30044665 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 30044707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31435999 - 31436041
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  31435999 ccggcctaacaatttcggca-ttttaccagttgaactaggactt 31436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33840667 - 33840624
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||    
T  33840667 ccggcctaataatttcggcatttttgctagttgagctaggactt 33840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35828321 - 35828279
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  35828321 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 35828279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37166185 - 37166143
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  37166185 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 37166143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42154219 - 42154261
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  42154219 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 42154261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42856610 - 42856568
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  42856610 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 42856568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46343376 - 46343333
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| ||||  |||||||||||||||||    
T  46343376 ccggcctaacaatttcggcacttttgtcagttgagctaggactt 46343333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46488198 - 46488240
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  46488198 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 46488240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47462117 - 47462159
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  47462117 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 47462159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49535932 - 49535890
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  49535932 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 49535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 49882790 - 49882832
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  49882790 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 49882832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54907973 - 54908015
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  54907973 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 54908015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 55853399 - 55853438
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  55853399 cctaacaattttggcatttttgccagttgagctaggactt 55853438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 1982607 - 1982566
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1982607 cggcctaacaatttcggca-ttttgccagttgagctaggactt 1982566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 37340189 - 37340231
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||| |||||||| ||||||| |||||||||    
T  37340189 cggcctaacaatttcgacatttttatcagttgaactaggactt 37340231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 26186220 - 26186261
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||    
T  26186220 ggcctaacaatttcgacatttttactagttgagctagaactt 26186261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 50981781 - 50981822
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||  |||||||| ||||||||    
T  50981781 ggcctaacaatttcggcatttttgtcagttgagttaggactt 50981822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26441014 - 26440975
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  26441014 ccggcctaacaatttcggca-ttttgccagttgagctagga 26440975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 31010029 - 31010068
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  31010029 gcctaacaatttcggca-ttttaccagttgagctaagactt 31010068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 270402 - 270445
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  270402 ccggcctaacaatttcggcatttttgccagttgagctaggactt 270445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 7204590 - 7204632
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  7204590 cggcctaacaatttcggcatttttgccagttgagctaggactt 7204632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 17540159 - 17540200
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  17540159 ggcctaacaatttcggcatttttactagttgagctaggactt 17540200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 49632599 - 49632559
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  49632599 gcctaacaatttcggcatttttaccagttgaactaggactt 49632559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10430420 - 10430463
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||||  |||||||||||||||||    
T  10430420 ccggcctaacaatttcggcatttttgtcagttgagctaggactt 10430463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17068199 - 17068157
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  17068199 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 17068157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26261374 - 26261416
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  26261374 ccggcctaacaatttcggcattttt-ccagttgagctaggactt 26261416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37186898 - 37186941
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  37186898 ccggcttaacaatttcggcatttttaccagttgagctagaactt 37186941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39606452 - 39606409
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||    
T  39606452 ccggcctaacaatatcggcatttttgccagttgagctaggactt 39606409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 3628699 - 3628659
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  3628699 gcctaacaatttcggcatttttatcagttgagttaggactt 3628659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 5598344 - 5598306
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  5598344 cctaacaatttcggcattttt-ccagttgagctaggactt 5598306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10635536 - 10635494
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  10635536 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 10635494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 15331147 - 15331185
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  15331147 cctaacaatttcggcattttt-ccagttgagctaggactt 15331185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 19279937 - 19279975
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  19279937 cctaacaatttcggcatttt-accagttgagctaggactt 19279975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19338259 - 19338301
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  19338259 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 19338301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 23225375 - 23225414
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  23225375 cctaacaattttgacatttttaccagttgagctaggactt 23225414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24119703 - 24119661
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  24119703 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 24119661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28999421 - 28999379
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  28999421 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 28999379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29005137 - 29005095
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  29005137 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 29005095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40809294 - 40809336
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  40809294 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 40809336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40958655 - 40958697
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  40958655 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 40958697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 41651116 - 41651078
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  41651116 cctaacaatttcggcatttt-accagttgagctaggactt 41651078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42631066 - 42631108
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  42631066 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 42631108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43086552 - 43086594
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  43086552 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 43086594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43676105 - 43676147
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  43676105 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 43676147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45611542 - 45611585
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||||  |||||||||||| ||||    
T  45611542 ccggcctaacaatttcggcatttttgtcagttgagctagaactt 45611585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48314214 - 48314172
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  48314214 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 48314172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48392003 - 48391961
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  48392003 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 48391961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49500908 - 49500866
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  49500908 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 49500866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 34271102 - 34271144
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||    
T  34271102 cggcctaacaatttcgtcatttttactagttgagctagtactt 34271144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 4628047 - 4628088
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||| ||||||||  |||||||||||||||||    
T  4628047 ggcctaacaatttcagcatttttgtcagttgagctaggactt 4628088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 16867475 - 16867516
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||| |||||||||||||| ||||||||| ||||||||    
T  16867475 ggcctaacgatttcggcatttttgccagttgagttaggactt 16867516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 38886472 - 38886512
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  38886472 ggcctaacaatttcggtatttt-accagttgagctaggactt 38886512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20164154 - 20164193
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  20164154 ccggcctaacaatttcggca-ttttgccagttgagctagga 20164193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21938989 - 21938948
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||| |||||||||||||||  |||||||||||||||||||    
T  21938989 ccggccttacaatttcggcattt--accagttgagctaggactt 21938948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27868325 - 27868285
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    |||||||||||||||||| ||||||  ||||||||||||||    
T  27868325 ccggcctaacaatttcggtatttttgtcagttgagctagga 27868285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43837135 - 43837095
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    |||||||||||||| || ||||||| |||||||||||||||    
T  43837135 ccggcctaacaattccgacatttttgccagttgagctagga 43837095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39394 - 39436
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  39394 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 39436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1522740 - 1522697
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  1522740 ccggcctaacaatttcggtatttttgccagttgagctaggactt 1522697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7772131 - 7772173
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  7772131 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 7772173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11100369 - 11100411
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  11100369 ccggcctaacaatttcggcattttt-ccagttgagctaggactt 11100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25063387 - 25063344
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  25063387 ccggcctaacaatttcggcatttttgccagttgaactaggactt 25063344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25199093 - 25199051
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  25199093 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 25199051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26675604 - 26675562
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  26675604 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 26675562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26738018 - 26737976
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  26738018 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 26737976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36442768 - 36442811
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||||| |||||||| ||||||||    
T  36442768 ccggcctaacaatttcggcatttttatcagttgagttaggactt 36442811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 11637635 - 11637676
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  11637635 ggcctaacaatttcgacattttttccagttgagctaggactt 11637676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 40418173 - 40418132
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  40418173 ggcctaacaatttcagcatttttaccagttgagctagaactt 40418132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 42158600 - 42158563
Alignment:
Q  7 taacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  42158600 taacaatttcggcatttttaccaattgagctaggactt 42158563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 14243743 - 14243704
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  14243743 gcctaacaatttcggcatttt-accagttgagctaggactt 14243704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37953830 - 37953787
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  37953830 ccggcctaacaatttcgacattttt-ccagttgagctaggacttt 37953787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40216827 - 40216783
Alignment:
Q  1 ccggcctaacaattt-cggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    
T  40216827 ccggcctaacaattttcggcatttttgccagttgagctaggactt 40216783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2733663 - 2733621
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  2733663 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 2733621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4430816 - 4430858
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  4430816 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 4430858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4977115 - 4977157
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  4977115 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 4977157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6317347 - 6317305
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  6317347 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 6317305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 16816872 - 16816833
Alignment:
Q  2 cggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  16816872 cggcctaacaatttcgacatttttgccagttgagctagga 16816833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24242666 - 24242709
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| || |||||| ||||||||    
T  24242666 ccggcctaacaatttcggcatttttgccggttgagttaggactt 24242709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26690741 - 26690699
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  26690741 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 26690699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27849823 - 27849866
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||||||||  |||||||| ||||||||    
T  27849823 ccggcctaacaatttcggcatttttgtcagttgagttaggactt 27849866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33067469 - 33067511
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  33067469 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 33067511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37295173 - 37295131
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  37295173 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 37295131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38070562 - 38070604
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  38070562 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 38070604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41562489 - 41562447
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  41562489 ccggcctaacaatttcgacatttt-accagttgagctaggactt 41562447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44814910 - 44814868
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  44814910 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 44814868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 3673928 - 3673964
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctagga 41  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  3673928 cctaacaatttcgacatttttgccagttgagctagga 3673964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11565047 - 11565007
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    |||||||||||||||| |||||||| ||||||||| |||||    
T  11565047 ccggcctaacaatttcagcatttttgccagttgagttagga 11565007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 16501693 - 16501653
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  16501693 gcctaacaatatcagcatttttgccagttgagctaggactt 16501653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25899263 - 25899303
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctagga 41  Q
    |||||||||||||||||||||||||  |||||||| |||||    
T  25899263 ccggcctaacaatttcggcatttttgtcagttgagttagga 25899303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 11543884 - 11543923
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  11543884 cctaacaatttcggcatttttgccagttgagctaggactt 11543923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12236168 - 12236126
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  12236168 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 12236126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39070066 - 39070024
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  39070066 ccggcctaacaatttcggca-ttttaccagttgagctaggactt 39070024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 19134599 - 19134640
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  19134599 ggcctaacaatttcgacattttttccagttgagctaggactt 19134640  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2287390 - 2287432
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  2287390 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 2287432  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7975095 - 7975137
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  7975095 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 7975137  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10392692 - 10392650
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  10392692 ccggcctaacaatgtcggcatttt-accagttgagctaggactt 10392650  T

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Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15897261 - 15897219
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  15897261 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 15897219  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20251566 - 20251608
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  20251566 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 20251608  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22999122 - 22999079
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||| |||||||||| |||||||||||| |||||||||||||||    
T  22999122 ccggactaacaattttggcatttttacccgttgagctaggactt 22999079  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23080179 - 23080221
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  23080179 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 23080221  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23497593 - 23497635
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  23497593 ccggcctaacaatttcggca-ttttaccagttgaactaggactt 23497635  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25510383 - 25510425
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  25510383 ccggcctaacaatttcggtatttt-accagttgagctaggactt 25510425  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31516286 - 31516328
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||    
T  31516286 ccggcctaacaatttcggcattttt-ccagttgagttaggactt 31516328  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32023299 - 32023257
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  32023299 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 32023257  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34242532 - 34242574
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  34242532 ccggcctaacaatttcggca-ttttatcagttgagctaggactt 34242574  T

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Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34667091 - 34667049
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  34667091 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 34667049  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35687867 - 35687909
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  35687867 ccggcctaacaatttcggca-ttttatcagttgagctaggactt 35687909  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36754822 - 36754864
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  36754822 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 36754864  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38490481 - 38490523
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  38490481 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 38490523  T

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Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42007296 - 42007338
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  42007296 ccggcctaacaatttcgacatttt-accagttgagctaggactt 42007338  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42160338 - 42160380
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  42160338 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 42160380  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43461415 - 43461457
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  43461415 ccggcctaacaatttcgacatttt-accagttgagctaggactt 43461457  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12221225 - 12221267
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggact 43  Q
    ||||||||||||||||  ||||||| |||||||||||||||||    
T  12221225 ccggcctaacaatttcatcatttttgccagttgagctaggact 12221267  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 33607088 - 33607048
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  33607088 ggcctaacaatttcggca-ttttgccagttgagctaggactt 33607048  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39417490 - 39417449
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggac 42  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  39417490 ccggcctaacaatttcggtatttttgtcagttgagctaggac 39417449  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 32517902 - 32517942
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||| |||||||| ||||||| |||||||||    
T  32517902 gcctaacaatttcgacatttttatcagttgaactaggactt 32517942  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 34481755 - 34481794
Alignment:
Q  4 gcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  34481755 gcctaacaatttcggca-ttttgccagttgagctaggactt 34481794  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38140738 - 38140695
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||    
T  38140738 ccggcttaacaatttcggcatttt-accagttgagttaggacttt 38140695  T

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Target: scaffold0633 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 3880 - 3918
Alignment:
Q  5 cctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3880 cctaacaatttcggcatttt-accagttgagctaggactt 3918  T

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Target: scaffold0457 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6826 - 6784
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  6826 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 6784  T

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Target: scaffold0432 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9414 - 9372
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  9414 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 9372  T

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Target: scaffold0402 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1322 - 1364
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  1322 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 1364  T

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Target: scaffold0287 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1139 - 1181
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  1139 ccggcctaacaatttcggca-ttttgccagttgagctaggactt 1181  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 90614 - 90574
Alignment:
Q  3 ggcctaacaatttcggcatttttaccagttgagctaggactt 44  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  90614 ggcctaacaatttcggca-ttttgccagttgagctaggactt 90574  T

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Target: scaffold0595 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 392 - 349
Alignment:
Q  1 ccggcctaacaatttcggcatttttaccagttgagctaggacttt 45  Q
    |||||||||||||||||||| | || |||||||||||||||||||    
T  392 ccggcctaacaatttcggca-tattgccagttgagctaggacttt 349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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