View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1036_low_12 (Length: 312)
Name: NF1036_low_12
Description: NF1036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1036_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 126 - 285
Target Start/End: Original strand, 38930149 - 38930309
Alignment:
| Q |
126 |
aacgtaccaagctaagttggttgctaaaaaagtttggttgtgagaagtttgtactattgagaaataaagtttccactcatt-gtgagtgggtaattgagc |
224 |
Q |
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| T |
38930149 |
aacgtaccaagctaagttggttgctaaaaagttttggttgtgagaagtttgtactattgagaaataaagtttccactcatttgcgagtgggtaattgagc |
38930248 |
T |
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| Q |
225 |
ctctatcatttttggtcctcaaaatatggatgattgatccagttacgtctcatactaatta |
285 |
Q |
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| T |
38930249 |
ctctatcatttttggtcctcaaaatatggatgattgatccagttacgtctcatactaatta |
38930309 |
T |
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