View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10371_low_14 (Length: 322)
Name: NF10371_low_14
Description: NF10371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10371_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 44542771 - 44542460
Alignment:
| Q |
1 |
cttgaggaggatgccacatcgtattatataacaattaattaatatacacatatcacacatagttgattggtaaatgtgtatctttttaaattgcggtcgt |
100 |
Q |
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| T |
44542771 |
cttgaggaggatgccacatcgtatgatataacaattaattaatatacacatatcacacatagttgattagtaaatgtgtatctttttaaattgcggtcgt |
44542672 |
T |
|
| Q |
101 |
aattgcagttatgatcgccattgcagttatgctgcaaacctttacgccgtgattgcggttgcagacagcgatttaaaacattcttttattaataattatg |
200 |
Q |
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| T |
44542671 |
aattgcagttatgatcgccattgcagttatgctgcaaacctttatgccgtgattgcggttgcagacagcgatttaaaacattcttttattaataattatg |
44542572 |
T |
|
| Q |
201 |
tccttccttttgtcatgttcaattacataaaatttcattacatcgttaacttgtgtcaattgttgcagttgtttgacatccaatgagtgcaccaagacaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44542571 |
tccttccttttgtcatgttcaattacataaaatttcattacatcgttaacttgtgtcaattgttgcagttgtttgacatccaatgagtgcaccaagacaa |
44542472 |
T |
|
| Q |
301 |
ttagttcctttg |
312 |
Q |
| |
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|||||||||||| |
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| T |
44542471 |
ttagttcctttg |
44542460 |
T |
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