View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10374_low_14 (Length: 249)

Name: NF10374_low_14
Description: NF10374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10374_low_14
NF10374_low_14
[»] scaffold0098 (1 HSPs)
scaffold0098 (93-238)||(44502-44647)
[»] chr6 (31 HSPs)
chr6 (93-238)||(26138390-26138535)
chr6 (93-238)||(26017635-26017781)
chr6 (93-238)||(26157008-26157154)
chr6 (93-238)||(25507320-25507465)
chr6 (94-211)||(23574910-23575027)
chr6 (134-238)||(5398996-5399099)
chr6 (93-196)||(18234089-18234192)
chr6 (94-211)||(23517585-23517702)
chr6 (102-211)||(17739358-17739467)
chr6 (94-227)||(17284281-17284414)
chr6 (135-227)||(5949867-5949959)
chr6 (135-225)||(29253753-29253842)
chr6 (151-227)||(25949102-25949177)
chr6 (93-185)||(29253662-29253754)
chr6 (93-196)||(12660733-12660836)
chr6 (101-196)||(18399903-18399998)
chr6 (151-224)||(25963702-25963774)
chr6 (151-224)||(25968349-25968421)
chr6 (93-185)||(5949958-5950050)
chr6 (151-211)||(32543037-32543097)
chr6 (93-182)||(5398905-5398995)
chr6 (102-196)||(13217570-13217664)
chr6 (94-182)||(25948995-25949084)
chr6 (94-182)||(25963595-25963684)
chr6 (94-182)||(25968242-25968331)
chr6 (93-177)||(12658260-12658344)
chr6 (93-148)||(20222194-20222249)
chr6 (93-148)||(22116178-22116233)
chr6 (94-139)||(3923381-3923426)
chr6 (102-182)||(32542938-32543019)
chr6 (94-158)||(20464003-20464067)
[»] chr7 (49 HSPs)
chr7 (93-238)||(6257736-6257881)
chr7 (135-238)||(9194213-9194316)
chr7 (135-225)||(21005695-21005785)
chr7 (135-227)||(1462334-1462426)
chr7 (93-182)||(1462243-1462332)
chr7 (93-182)||(21005787-21005876)
chr7 (135-227)||(9004395-9004486)
chr7 (135-238)||(48713238-48713342)
chr7 (94-196)||(4461012-4461114)
chr7 (93-185)||(19515686-19515778)
chr7 (93-182)||(48713147-48713236)
chr7 (151-227)||(10204468-10204543)
chr7 (151-227)||(14941945-14942020)
chr7 (151-227)||(15369538-15369613)
chr7 (151-232)||(33609492-33609573)
chr7 (151-226)||(15707457-15707531)
chr7 (151-226)||(25181186-25181260)
chr7 (135-224)||(19515599-19515687)
chr7 (151-211)||(4313017-4313077)
chr7 (93-185)||(9004304-9004396)
chr7 (151-226)||(35964459-35964533)
chr7 (152-210)||(649018-649076)
chr7 (141-238)||(9264608-9264705)
chr7 (151-211)||(4307647-4307707)
chr7 (151-211)||(8880187-8880247)
chr7 (151-227)||(13434661-13434736)
chr7 (93-196)||(11484131-11484234)
chr7 (94-175)||(9192494-9192576)
chr7 (94-182)||(4307540-4307629)
chr7 (94-182)||(4312910-4312999)
chr7 (93-182)||(9194318-9194407)
chr7 (94-182)||(13434554-13434643)
chr7 (151-232)||(16897496-16897577)
chr7 (94-182)||(25181278-25181367)
chr7 (94-182)||(33612577-33612666)
chr7 (94-173)||(14942047-14942126)
chr7 (94-173)||(15369640-15369719)
chr7 (151-210)||(33612501-33612559)
chr7 (94-182)||(649095-649184)
chr7 (94-182)||(16463534-16463623)
chr7 (102-182)||(33609393-33609474)
chr7 (94-182)||(48355898-48355987)
chr7 (102-178)||(9264717-9264793)
chr7 (151-211)||(16463456-16463516)
chr7 (94-148)||(8880349-8880403)
chr7 (94-148)||(15707584-15707638)
chr7 (151-204)||(48355827-48355880)
chr7 (94-181)||(35964552-35964640)
chr7 (94-182)||(10204361-10204450)
[»] chr3 (22 HSPs)
chr3 (93-227)||(22038605-22038738)
chr3 (93-196)||(34053879-34053982)
chr3 (162-238)||(13601521-13601597)
chr3 (151-227)||(14495032-14495107)
chr3 (94-202)||(17022964-17023072)
chr3 (107-202)||(20225520-20225615)
chr3 (151-227)||(11398668-11398743)
chr3 (93-185)||(19567325-19567416)
chr3 (93-185)||(25766018-25766110)
chr3 (151-226)||(36075974-36076048)
chr3 (135-225)||(19567237-19567326)
chr3 (93-182)||(13601414-13601503)
chr3 (151-227)||(14661000-14661075)
chr3 (151-227)||(25054814-25054889)
chr3 (94-182)||(14495125-14495214)
chr3 (151-210)||(3245284-3245343)
chr3 (94-182)||(14661093-14661182)
chr3 (94-182)||(3250385-3250474)
chr3 (164-210)||(3250329-3250375)
chr3 (96-182)||(11398564-11398651)
chr3 (94-148)||(3245396-3245450)
chr3 (94-148)||(25054705-25054759)
[»] scaffold0264 (1 HSPs)
scaffold0264 (93-238)||(22626-22775)
[»] scaffold0012 (2 HSPs)
scaffold0012 (135-238)||(49652-49755)
scaffold0012 (93-182)||(49561-49650)
[»] chr5 (14 HSPs)
chr5 (137-227)||(20104161-20104251)
chr5 (102-211)||(2953786-2953895)
chr5 (93-182)||(20104255-20104344)
chr5 (151-227)||(15059232-15059307)
chr5 (151-226)||(23343759-23343833)
chr5 (141-211)||(20738119-20738189)
chr5 (162-227)||(20967558-20967622)
chr5 (135-227)||(21273407-21273498)
chr5 (93-196)||(16676806-16676909)
chr5 (93-182)||(25486009-25486098)
chr5 (94-182)||(20967440-20967529)
chr5 (94-182)||(15059125-15059214)
chr5 (94-182)||(23343851-23343940)
chr5 (93-174)||(24164708-24164789)
[»] chr1 (22 HSPs)
chr1 (134-238)||(8648624-8648728)
chr1 (102-233)||(39286843-39286973)
chr1 (93-231)||(30819301-30819438)
chr1 (135-238)||(20412019-20412122)
chr1 (151-227)||(44538041-44538116)
chr1 (93-182)||(20411928-20412017)
chr1 (94-198)||(16382344-16382448)
chr1 (151-227)||(17716529-17716604)
chr1 (151-226)||(52236088-52236162)
chr1 (94-198)||(25405274-25405378)
chr1 (151-226)||(16431345-16431419)
chr1 (104-182)||(8648545-8648623)
chr1 (102-238)||(43998192-43998313)
chr1 (151-227)||(48256089-48256164)
chr1 (151-210)||(26134756-26134815)
chr1 (94-182)||(48255982-48256071)
chr1 (94-182)||(16431238-16431327)
chr1 (94-182)||(17716422-17716511)
chr1 (94-182)||(44537934-44538023)
chr1 (102-182)||(52236180-52236261)
chr1 (94-148)||(26134868-26134922)
chr1 (94-158)||(20861115-20861179)
[»] chr4 (22 HSPs)
chr4 (135-241)||(10730915-10731021)
chr4 (135-241)||(10944684-10944790)
chr4 (94-211)||(38651866-38651983)
chr4 (151-227)||(24125437-24125512)
chr4 (151-225)||(45233914-45233987)
chr4 (101-185)||(11889309-11889393)
chr4 (151-211)||(11902856-11902916)
chr4 (151-227)||(15409830-15409905)
chr4 (151-227)||(31593671-31593746)
chr4 (151-209)||(45244498-45244556)
chr4 (151-212)||(21275031-21275092)
chr4 (94-182)||(13622011-13622099)
chr4 (164-227)||(13622109-13622171)
chr4 (151-209)||(3772439-3772497)
chr4 (94-182)||(11902934-11903023)
chr4 (151-196)||(11889249-11889294)
chr4 (94-182)||(15409723-15409812)
chr4 (94-182)||(45234005-45234094)
chr4 (94-173)||(24125538-24125618)
chr4 (93-148)||(5513962-5514017)
chr4 (93-170)||(10730825-10730902)
chr4 (93-170)||(10944594-10944671)
[»] scaffold0334 (1 HSPs)
scaffold0334 (102-202)||(6936-7036)
[»] scaffold0092 (2 HSPs)
scaffold0092 (135-223)||(19751-19839)
scaffold0092 (93-173)||(19850-19930)
[»] chr8 (11 HSPs)
chr8 (151-236)||(9973-10058)
chr8 (135-227)||(14351853-14351944)
chr8 (135-227)||(24967045-24967136)
chr8 (151-226)||(18161799-18161873)
chr8 (94-211)||(21319158-21319275)
chr8 (93-196)||(24341774-24341877)
chr8 (93-185)||(24966954-24967046)
chr8 (102-183)||(10060-10141)
chr8 (94-185)||(14351943-14352033)
chr8 (94-182)||(18161692-18161781)
chr8 (93-174)||(24221905-24221986)
[»] scaffold0168 (2 HSPs)
scaffold0168 (135-238)||(9079-9182)
scaffold0168 (102-173)||(9193-9264)
[»] chr2 (27 HSPs)
chr2 (93-185)||(23140287-23140379)
chr2 (93-185)||(23552077-23552169)
chr2 (151-227)||(24507110-24507185)
chr2 (136-212)||(44997996-44998072)
chr2 (151-225)||(25481177-25481250)
chr2 (151-225)||(25488783-25488856)
chr2 (104-196)||(15583502-15583594)
chr2 (135-227)||(23140197-23140288)
chr2 (135-227)||(23551987-23552078)
chr2 (93-182)||(29568801-29568890)
chr2 (136-196)||(29568738-29568798)
chr2 (93-176)||(25858962-25859045)
chr2 (157-211)||(32441634-32441688)
chr2 (157-227)||(16134407-16134476)
chr2 (93-183)||(44997904-44997994)
chr2 (151-211)||(20281829-20281889)
chr2 (94-196)||(25337421-25337523)
chr2 (157-210)||(19927200-19927253)
chr2 (192-238)||(25858861-25858907)
chr2 (94-182)||(19927087-19927176)
chr2 (101-182)||(20281730-20281811)
chr2 (94-182)||(32441712-32441801)
chr2 (94-175)||(24507003-24507085)
chr2 (94-182)||(11390846-11390935)
chr2 (94-182)||(11407507-11407596)
chr2 (94-182)||(16134500-16134589)
chr2 (93-173)||(24371795-24371875)
[»] scaffold0471 (2 HSPs)
scaffold0471 (151-227)||(10025-10100)
scaffold0471 (94-173)||(10126-10206)
[»] scaffold0371 (2 HSPs)
scaffold0371 (151-227)||(9306-9381)
scaffold0371 (94-182)||(9399-9488)
[»] scaffold0251 (2 HSPs)
scaffold0251 (151-227)||(19159-19234)
scaffold0251 (94-182)||(19252-19341)
[»] scaffold0713 (2 HSPs)
scaffold0713 (93-183)||(6950-7040)
scaffold0713 (194-233)||(6922-6961)
[»] scaffold0064 (2 HSPs)
scaffold0064 (151-225)||(48589-48662)
scaffold0064 (94-172)||(48482-48561)
[»] scaffold0058 (2 HSPs)
scaffold0058 (162-227)||(61654-61718)
scaffold0058 (95-182)||(61542-61630)
[»] scaffold0057 (2 HSPs)
scaffold0057 (151-211)||(20958-21018)
scaffold0057 (94-182)||(20851-20940)
[»] scaffold0031 (4 HSPs)
scaffold0031 (151-205)||(23063-23117)
scaffold0031 (151-212)||(100168-100229)
scaffold0031 (94-182)||(22956-23045)
scaffold0031 (94-182)||(100061-100150)
[»] scaffold0916 (2 HSPs)
scaffold0916 (151-227)||(3289-3364)
scaffold0916 (94-182)||(3182-3271)
[»] scaffold0360 (1 HSPs)
scaffold0360 (94-175)||(39-121)
[»] scaffold0096 (2 HSPs)
scaffold0096 (169-227)||(38167-38224)
scaffold0096 (151-205)||(38210-38264)
[»] scaffold0197 (2 HSPs)
scaffold0197 (151-211)||(9109-9169)
scaffold0197 (94-182)||(9187-9276)
[»] scaffold0447 (4 HSPs)
scaffold0447 (151-210)||(6217-6276)
scaffold0447 (151-210)||(10831-10890)
scaffold0447 (94-148)||(6132-6186)
scaffold0447 (94-148)||(10746-10800)
[»] scaffold0383 (2 HSPs)
scaffold0383 (151-210)||(8826-8885)
scaffold0383 (94-148)||(8741-8795)
[»] scaffold0213 (2 HSPs)
scaffold0213 (94-182)||(26667-26756)
scaffold0213 (94-181)||(21370-21456)
[»] scaffold0014 (1 HSPs)
scaffold0014 (93-174)||(167827-167908)


Alignment Details
Target: scaffold0098 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 44647 - 44502
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||| || |||||||||| ||||||||| ||||||||||||||||||    
T  44647 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaattataaagatctcatgcaaaaatatattgtgcaaagaatttgaa 44548  T
Q  193 gatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||    
T  44547 gatcttgtgcaaaaatataacaagtggcgcgccccttttacccttt 44502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 26138390 - 26138535
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||| ||||||||  |||||||||| |||||||||||||||||||||| ||||||||    
T  26138390 gaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaataatttgaa 26138489  T
Q  193 gatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||    
T  26138490 gatcttgtgcaaaaatataacaagtggcgggccccttttacccttt 26138535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 26017635 - 26017781
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaata-agaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttga 191  Q
    |||||||||||||||||||||||| |||   |||||| ||||| |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  26017635 gaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaagaatttga 26017734  T
Q  192 agatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  26017735 agatcttgtgcaaaaatataacaagtggcgcaccccttttacccttt 26017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 26157008 - 26157154
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaata-agaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttga 191  Q
    |||||||||||||||||||||||| |||   |||||| ||||| |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  26157008 gaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaagaatttga 26157107  T
Q  192 agatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  26157108 agatcttgtgcaaaaatataacaagtggcgcaccccttttacccttt 26157154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 25507320 - 25507465
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||||||||||||||| ||||||||  |||||| |||||||||| ||||||||  |||||||| ||||| |||||||| ||||||||||||||||||    
T  25507320 gaaagatggagtcttggagaaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagatatcatagaaaaatatattgtgcaaagaatttgaa 25507419  T
Q  193 gatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    |||||||| ||||||||||||||||||| |||| ||||| ||||||    
T  25507420 gatcttgtgcaaaaatataacaagtggcacgcctcttttacccttt 25507465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 23575027 - 23574910
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 193  Q
    |||||| ||||||||||||| ||||||  |||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  23575027 aaagattgagtcttggagcagaagaaaggagaattggagctgattcatgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaagaatttgaag 23574928  T
Q  194 atcttgtacaaaaatata 211  Q
    ||||||||| ||||||||    
T  23574927 atcttgtaccaaaatata 23574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 5398996 - 5399099
Alignment:
Q  134 tgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgc 233  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  5398996 tgattcatgccaaaaatatgaagatctcatgcaaaaatatcttgtgcaaataatttgaagatcttgtacaaaaatataacaagtgg-gtgccccttttgc 5399094  T
Q  234 ccttt 238  Q
    |||||    
T  5399095 ccttt 5399099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 18234192 - 18234089
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||||||||||||||||||| ||||  |||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||    
T  18234192 gaaagatggagtcttggagcaaaggaaaagagaattggagctgattcatgccaaaaatacgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 18234093  T
Q  193 gatc 196  Q
    ||||    
T  18234092 gatc 18234089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 23517702 - 23517585
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 193  Q
    |||||| ||||||||||||||||||||  | |||| ||||||||||||| |||||  |||||||||| |||||||||||| |||||||||||||||||||    
T  23517702 aaagattgagtcttggagcaaaagaaaggataattggagctgattcatgtcaaaaatatgaagatcttatacaaaaatattttgtgcaaagaatttgaag 23517603  T
Q  194 atcttgtacaaaaatata 211  Q
    ||||||||| ||||||||    
T  23517602 atcttgtaccaaaatata 23517585  T

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Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 17739358 - 17739467
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 201  Q
    |||||||||||||||||||  |||||| ||| | |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17739358 agtcttggagcaaaagaaaggagaattggagttaattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgta 17739457  T
Q  202 caaaaatata 211  Q
    |  |||||||    
T  17739458 ccgaaatata 17739467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 17284414 - 17284281
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaa-gatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    |||||| ||||||| ||||||||||||| |||||| |||||||||| ||| ||||  || || ||||| |||||||||||||| ||||||||||||||||    
T  17284414 aaagattgagtcttagagcaaaagaaatgagaattggagctgattcgtgcaaaaaatataaaagatcttatacaaaaatatctggtgcaaagaatttgaa 17284315  T
Q  193 gatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    |||||||||||  ||||| | ||||||||||||||    
T  17284314 gatcttgtacattaatatca-aagtggcgcgcccc 17284281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 5949959 - 5949867
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaa-atatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  5949959 gattcatgccaaaaatatgaagatctcataccaaatatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 5949867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 29253753 - 29253842
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 225  Q
    |||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  29253753 gattcatgtcaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatatga-aagtggcgcgcc 29253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 25949102 - 25949177
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  25949102 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 25949177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 29253662 - 29253754
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    ||||||||||||||||||||||||||||  | |||| |||||||||| ||||||||  ||||||||||| ||||||||||| | |||||||||    
T  29253662 gaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagatctcgtacaaaaatatatggtgcaaaga 29253754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 12660836 - 12660733
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||| ||||||||||||||||||||  ||| || |||||||||  ||||||||  || ||||||| ||| |||||||||||| ||||||||||||||    
T  12660836 gaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagatcttatataaaaatatcttgggcaaagaatttgaa 12660737  T
Q  193 gatc 196  Q
    ||||    
T  12660736 gatc 12660733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 18399998 - 18399903
Alignment:
Q  101 gagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 196  Q
    ||||||||||| ||||||||  | |||||||||||||||  |||||||  |||||||||| ||||||||||||||||||||||||| ||| |||||    
T  18399998 gagtcttggagaaaaagaaaggataattagagctgattccggccaaaaatatgaagatctaatacaaaaatatcttgtgcaaagaaattgtagatc 18399903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 25963702 - 25963774
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgc 224  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||    
T  25963702 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatat-acaagaggcgcgc 25963774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 25968349 - 25968421
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgc 224  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||    
T  25968349 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatat-acaagaggcgcgc 25968421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 5950050 - 5949958
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    |||||||||||||||| |||||||||||  |||||| ||||| |||||||||||||  || |||||||||| |||||| || |||||||||||    
T  5950050 gaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaaaatattgtgcaaaga 5949958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 32543037 - 32543097
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  32543037 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 32543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 5398905 - 5398995
Alignment:
Q  93 gaaagatggagtctt-ggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||| |||||||||||||  |||| |   ||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  5398905 gaaagatggagtctttggagcaaaagaaaggagaaatgttgcttattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 5398995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 13217664 - 13217570
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 196  Q
    |||||||||||||||||||  ||| ||| ||||||||  ||||||||  |||||||||| |||||||||||||||||| ||| | ||||||||||    
T  13217664 agtcttggagcaaaagaaaggagatttacagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgtaaaaagtttgaagatc 13217570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 25948995 - 25949084
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  25948995 aaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25949084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 25963595 - 25963684
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  25963595 aaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25963684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 25968242 - 25968331
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  25968242 aaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25968331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 12658344 - 12658260
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttg 177  Q
    ||||||| ||||||||||||||||||||  ||| || |||||||||  ||||||||  || ||||||| ||| ||||||||||||    
T  12658344 gaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagatcttatataaaaatatcttg 12658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 20222194 - 20222249
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    ||||||| ||||||||||||||||||||| ||| || ||||||||| | |||||||    
T  20222194 gaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaa 20222249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 22116178 - 22116233
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    ||||||| ||||||||||||||||||||| ||| || ||||||||| | |||||||    
T  22116178 gaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaa 22116233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 3923381 - 3923426
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattc 139  Q
    |||||| ||||||||||||||||||||| ||| || ||||||||||    
T  3923381 aaagattgagtcttggagcaaaagaaatgagatttggagctgattc 3923426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 32542938 - 32543019
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| | |||||||||||| ||||||    
T  32542938 agtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 32543019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 20464003 - 20464067
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagat 158  Q
    |||||| ||||||||||||||||||||  ||| || ||||||||||  |||||||  ||||||||    
T  20464003 aaagattgagtcttggagcaaaagaaaggagatttggagctgattcgggccaaaaatatgaagat 20464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 6257881 - 6257736
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    |||||||||| ||||| ||||| |||||  ||| || |||||||||||||  ||||  |||||||||| |||||||||||||||||||||||||||||||    
T  6257881 gaaagatggaatcttgcagcaatagaaaggagacttggagctgattcatgtaaaaaatatgaagatctaatacaaaaatatcttgtgcaaagaatttgaa 6257782  T
Q  193 gatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  6257781 gatcttgtacaaaaatataacaagtggcgcaccccttttgcccttt 6257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 9194316 - 9194213
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 234  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||    
T  9194316 gattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgtaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttacc 9194217  T
Q  235 cttt 238  Q
    ||||    
T  9194216 cttt 9194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 21005785 - 21005695
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 225  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21005785 gattcatgcaaaaattatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatctcgtacaaaaatataacaagtggcgcgcc 21005695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 1462334 - 1462426
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    |||||||| |||||  ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1462334 gattcatgtcaaaaatatgaagatcccatacaaaaaaatcttgtgcaaagaattagaagatcttgtacaaaaatataacaagtggcgcgcccc 1462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 1462243 - 1462332
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  1462243 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaagtatgaagatctcatacaaaaatatcttgtgcaa 1462332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 21005876 - 21005787
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  21005876 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 21005787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 9004395 - 9004486
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  9004395 gattcatgccaaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 9004486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 48713238 - 48713342
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaa-tatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgc 233  Q
    ||||||||||||||  |||||||||||||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |    
T  48713238 gattcatgccaaaaatatgaagatctcatacaaaaaatatattgttcaaagaatttgaagatcttgtgcaaaaatataacaagtgccgcaccccttttac 48713337  T
Q  234 ccttt 238  Q
    |||||    
T  48713338 ccttt 48713342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 4461114 - 4461012
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 193  Q
    |||||| | ||||||||||||||||||  |||||| |||||||| | ||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  4461114 aaagattgcgtcttggagcaaaagaaaggagaattggagctgatccgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaagaatttgaag 4461015  T
Q  194 atc 196  Q
    |||    
T  4461014 atc 4461012  T

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Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 19515778 - 19515686
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    ||||||||||||||||||||||||||||  | |||| |||||||||| ||||||||  ||||||||||||||||||||||||| |||||||||    
T  19515778 gaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagatctcatacaaaaatatctggtgcaaaga 19515686  T

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Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 48713147 - 48713236
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||  || |||||||||| ||||||||| ||||||||    
T  48713147 gaaagatggagtcttggagcaaaagaaaagagaattagagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaa 48713236  T

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Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 10204468 - 10204543
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  10204468 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 10204543  T

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Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 14942020 - 14941945
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  14942020 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 14941945  T

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Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 15369613 - 15369538
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  15369613 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 15369538  T

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Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 33609492 - 33609573
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttg 232  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||  ||||| |||||||||| ||||    
T  33609492 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatacgacaagaggcgcgccccctttg 33609573  T

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Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 15707531 - 15707457
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 226  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  15707531 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgccc 15707457  T

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Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 25181260 - 25181186
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 226  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||    
T  25181260 atgaatatctcatacaaaaatatcttgtgaaaagaatttgaagatcttgtacaataatataa-aagtggtgcgccc 25181186  T

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Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 19515687 - 19515599
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgc 224  Q
    |||||||| |||||  ||||||||||||||| |||||||||| |||||||||||||||||||| |||||| ||||| | |||||||||||    
T  19515687 gattcatgtcaaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatctcgtacaataatatga-aagtggcgcgc 19515599  T

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Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 4313017 - 4313077
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  4313017 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 4313077  T

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Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 9004304 - 9004396
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    ||||||| ||||||||| |||||||||| ||||||| ||||| ||||||| |||||  || |||||||||| ||||||||| |||||||||||    
T  9004304 gaaagattgagtcttggggcaaaagaaagaagaattggagcttattcatggcaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 9004396  T

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Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 35964533 - 35964459
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 226  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| |||| ||||| |||||||||    
T  35964533 atgaatatctcatacaaaaatatcctgtgcaaagaatttaaagatcttgtacaaatatat-acaagaggcgcgccc 35964459  T

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Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 649076 - 649018
Alignment:
Q  152 tgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 210  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  649076 tgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaacatat 649018  T

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Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 9264705 - 9264608
Alignment:
Q  141 tgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    ||||||||  |||||||||| |  ||||||||| |||||| ||||||||||| ||||||| |||||||||||||||||| ||  ||||||| ||||||    
T  9264705 tgccaaaaatatgaagatctaaagcaaaaatatattgtgcgaagaatttgaatatcttgtgcaaaaatataacaagtggtgcaacccttttacccttt 9264608  T

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Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 4307647 - 4307707
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  4307647 atgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatata 4307707  T

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Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 8880247 - 8880187
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  8880247 atgaatatctcatacaaaaatatcctgtgcaaaaaatttgaagatcttgtacaaacatata 8880187  T

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Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 13434661 - 13434736
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||   ||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  13434661 atgaatatctcatacaaaaatattccgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 13434736  T

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Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 11484234 - 11484131
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||| ||||||  ||||||||||||  ||| || ||||||||| |||||||||  |||||||||| |||||||| ||||||||||||| | | ||||    
T  11484234 gaaagattgagtctcagagcaaaagaaaggagatttggagctgatttatgccaaaagtatgaagatcttatacaaaagtatcttgtgcaaaaagtgtgaa 11484135  T
Q  193 gatc 196  Q
    ||||    
T  11484134 gatc 11484131  T

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Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 9192494 - 9192576
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatct 175  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||||    
T  9192494 aaagattgagtcttggagcaaaagaaagaagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatct 9192576  T

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Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 4307540 - 4307629
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  4307540 aaagattgagtcttggaacaaaagaaaggagaattagagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 4307629  T

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Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 4312910 - 4312999
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatg-aagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  | |||| |||||||||| ||||||||  ||| |||||||||||||||| ||||| ||||||    
T  4312910 aaagattgagtcttggagcaaaagaaaggaaaattggagctgattcgtgccaaaaatatgaaagatctcatacaaaattatctggtgcaa 4312999  T

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Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 9194407 - 9194318
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||||||||||||||||  ||||||  |||| |||||||||||||  || ||||| |||| ||||||||| || |||||    
T  9194407 gaaagatggagtcttggagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagatttcatgcaaaaatatattctgcaa 9194318  T

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Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 13434554 - 13434643
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| |||||||||||||||||||| ||||||| |||| ||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  13434554 aaagattgagtcttggagcaaaagaaagaagaatttgagcggattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 13434643  T

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Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 16897577 - 16897496
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttg 232  Q
    ||||| ||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||  ||||| |||| ||||| ||||    
T  16897577 atgaatatctcatacaaaaatatattgtgcaaggaatttgaaaatcttgtacaataatacgacaagaggcgtgccccctttg 16897496  T

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Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 25181367 - 25181278
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| |||| |||||||||||||||| |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  25181367 aaagattgagttttggagcaaaagaaatgagaattggagctgattcgtgccaaaactataaaagatcttatacaaaaatatctggtgcaa 25181278  T

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Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 33612666 - 33612577
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||| |||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  33612666 aaagattgagtcttggagcaaaagaaatgagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 33612577  T

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Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 14942126 - 14942047
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 173  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||    ||||||| ||||||||||||    
T  14942126 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatataaaagatcttatacaaaaatat 14942047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 15369719 - 15369640
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 173  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||    ||||||| ||||||||||||    
T  15369719 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatataaaagatcttatacaaaaatat 15369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 33612559 - 33612501
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 210  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  33612559 atgaatatctcatacaaaa-tatcatgtgcaaagaatttgaagatcttgtacaaatatat 33612501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 649184 - 649095
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  |||||||  ||||||||||||| ||||||    
T  649184 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttgtacaaaaatatctggtgcaa 649095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 16463623 - 16463534
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  16463623 aaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 16463534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 33609393 - 33609474
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||  ||  ||||||| | |||||||||||| ||||||    
T  33609393 agtcttggagcaaaagaaaggagaatttgagctgattcatgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 33609474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 48355987 - 48355898
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  | |||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  48355987 aaagattgagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 48355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 9264793 - 9264717
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgt 178  Q
    |||||||||||||||||||  |||||| || || |||||||||||||  ||||||||||||| ||||| ||| ||||    
T  9264793 agtcttggagcaaaagaaaggagaattggaacttattcatgccaaaaatatgaagatctcatgcaaaagtatattgt 9264717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 16463516 - 16463456
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||| ||||||| |||||||||| | ||||||||||||||||||||| |||||| |||||    
T  16463516 atgaatatctcatgcaaaaatatcctatgcaaagaatttgaagatcttctacaaatatata 16463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 8880403 - 8880349
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  8880403 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtgccaaaa 8880349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 15707638 - 15707584
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  15707638 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 15707584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 48355880 - 48355827
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaa 204  Q
    ||||| |||||||||||||||||  | ||||||| |||||||||||||||||||    
T  48355880 atgaatatctcatacaaaaatattctatgcaaaggatttgaagatcttgtacaa 48355827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 35964640 - 35964552
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgca 181  Q
    |||||| ||||||||||||||||||||  |||| | |||||||||  ||||||||  ||  ||||||| |||||||||||||| |||||    
T  35964640 aaagattgagtcttggagcaaaagaaaggagaactggagctgatttgtgccaaaaatataaaagatcttatacaaaaatatctggtgca 35964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 10204361 - 10204450
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| ||| ||| || ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  10204361 aaagattgagtcttggagcaaaagaaaggagaattggagatgaatcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 10204450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 22038605 - 22038738
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||||||||||||||||||||||||  |||||| |||||  ||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |    
T  22038605 gaaagatggagtcttggagcaaaagaaaggagaattggagcttgttcatgccaaaaatatgaa-atctcatacaaaaatatcttgtgcaaagaatttgga 22038703  T
Q  193 gatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    |||||||||||||||||||||||||| ||||||||    
T  22038704 gatcttgtacaaaaatataacaagtgacgcgcccc 22038738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 34053982 - 34053879
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||||||||||||||| ||| ||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  34053982 gaaagatggagtcttggagaaaaggaaatgagaattggagctgattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 34053883  T
Q  193 gatc 196  Q
    ||||    
T  34053882 gatc 34053879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 13601521 - 13601597
Alignment:
Q  162 atacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  13601521 atacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgccccttttacccttt 13601597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 14495107 - 14495032
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14495107 atgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcgcgcccc 14495032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 17022964 - 17023072
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 193  Q
    |||||| |||| || ||||||||||||| |||||| |||||||||  ||||||||  | |||||||||| ||||||||||||||||||||||||| ||||    
T  17022964 aaagattgagtattagagcaaaagaaatgagaattggagctgatttgtgccaaaaataagaagatctcacacaaaaatatcttgtgcaaagaattagaag 17023063  T
Q  194 atcttgtac 202  Q
    |||||||||    
T  17023064 atcttgtac 17023072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 20225615 - 20225520
Alignment:
Q  107 tggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtac 202  Q
    ||||||||||||||  |||||| |||||||||| ||||||||  |||||||||||| |||||||||||||||  |||||||| |||||||||||||    
T  20225615 tggagcaaaagaaaggagaattggagctgattcttgccaaaaatatgaagatctcacacaaaaatatcttgtataaagaattagaagatcttgtac 20225520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 11398668 - 11398743
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  11398668 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 11398743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 19567416 - 19567325
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  19567416 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaa-aataaagatctcatgcaaaaatatattgtgcaaaga 19567325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 25766110 - 25766018
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    |||||||||||||||| |||||||||||  |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  25766110 gaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 25766018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 36075974 - 36076048
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 226  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  36075974 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccc 36076048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 19567326 - 19567237
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 225  Q
    ||||||||||||||  || ||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||||    
T  19567326 gattcatgccaaaaatattaagatctgataccaaaatatcttgtgcaaagaattcgaagatcttgtacaataatataa-aagtggtgcgcc 19567237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 13601414 - 13601503
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  || ||||||| || ||||||||| ||||||||    
T  13601414 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatcttatgcaaaaatatattgtgcaa 13601503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 14661075 - 14661000
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  14661075 atgaatatctcatacaaaaatatcatgtacgaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 14661000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 25054814 - 25054889
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  25054814 atgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 25054889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 14495214 - 14495125
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||||||||||||  ||  ||||||| |||||||||||||| ||||||    
T  14495214 aaagattgagtcttggagcaaaagaaacgagaattggagctgattcatgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 14495125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 3245343 - 3245284
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 210  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  3245343 atgaatatctcatacaaaaatatcatatgcaaagaatttgaagatcttgtacaaatatat 3245284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 14661182 - 14661093
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  14661182 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 14661093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 3250474 - 3250385
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  3250474 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 3250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 3250375 - 3250329
Alignment:
Q  164 acaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 210  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||    
T  3250375 acaaaaatatcatatgcaaagaatttgaagatcttgtacaaatatat 3250329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 11398564 - 11398651
Alignment:
Q  96 agatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| ||||||||||| || ||||||    
T  11398564 agattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatacaaaaatacctggtgcaa 11398651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 3245450 - 3245396
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    |||||| ||||||||||| ||||||||  |||||| |||||||||| ||||||||    
T  3245450 aaagattgagtcttggagtaaaagaaaggagaattggagctgattcgtgccaaaa 3245396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 25054705 - 25054759
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    |||||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||    
T  25054705 aaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaa 25054759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 22775 - 22626
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcata----caaaaatatcttgtgcaaagaatt 188  Q
    ||||||||||||||| ||||||||||||  ||| || ||||||||||||| |||||  ||||||||||||||    ||||||||||||||||||||||||    
T  22775 gaaagatggagtctttgagcaaaagaaaggagatttggagctgattcatgtcaaaaatatgaagatctcatatatacaaaaatatcttgtgcaaagaatt 22676  T
Q  189 tgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  22675 tgaagatattgtacaaaaatataacaagtgacgcgcccattttgcccttt 22626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 49652 - 49755
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 234  Q
    |||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49652 gattcatgtcaaaaatatgaagatctcatacgaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccctttttgcc 49751  T
Q  235 cttt 238  Q
    ||||    
T  49752 cttt 49755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 49561 - 49650
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||||| ||||||||| ||||||||    
T  49561 gaaagatggagtcttggagcaaaagaaataagaattggagcttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaa 49650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 20104251 - 20104161
Alignment:
Q  137 ttcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20104251 ttcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttatacaaaaatataacaagtggcgcgcccc 20104161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 2953895 - 2953786
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 201  Q
    ||||||||| |||||||||  |||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2953895 agtcttggaacaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgta 2953796  T
Q  202 caaaaatata 211  Q
    | | ||||||    
T  2953795 ccagaatata 2953786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 20104344 - 20104255
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||||||||||||||||  ||||||| |||| ||| |||||||||  ||||||||||||||||||||||||||||||||    
T  20104344 gaaagatggagtcttggagcaaaagaaaggagaattatagcttattgatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 20104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 15059232 - 15059307
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  15059232 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgcccc 15059307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 23343833 - 23343759
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 226  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  23343833 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgccc 23343759  T

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Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 20738119 - 20738189
Alignment:
Q  141 tgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||||||  || ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  20738119 tgccaaaaatataaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgtacaagaatata 20738189  T

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Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 20967558 - 20967622
Alignment:
Q  162 atacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  20967558 atacaaaaatatcttatgcaaagaatttgaagatcttgtacaaaaacataa-aagtggcgcgcccc 20967622  T

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Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 21273407 - 21273498
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||||||||  ||||||||||||||| || |||| ||||| |||||||||||| |||||| |||| ||||||| ||||||||||||||    
T  21273407 gattcatgccaaaaatatgaagatctcataccaatatatgttgtgtaaagaatttgaatatcttgcacaataatataa-aagtggcgcgcccc 21273498  T

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Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 16676806 - 16676909
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||| ||||||||||||||||||||   || ||  ||||||||  ||||||||  |||||||||| |||||||||||||||||||||| | ||||||    
T  16676806 gaaagattgagtcttggagcaaaagaaaagggatttgaagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaaaagtttgaa 16676905  T
Q  193 gatc 196  Q
    ||||    
T  16676906 gatc 16676909  T

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Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 25486098 - 25486009
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||| ||||||||||||  |||||| ||||| |||||| ||||||  || |||||||||| ||||||||| ||||||||    
T  25486098 gaaagatggagtctttgagcaaaagaaaggagaattggagcttattcataccaaaaatataaagatctcatgcaaaaatatattgtgcaa 25486009  T

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Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 20967440 - 20967529
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  20967440 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 20967529  T

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Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 15059125 - 15059214
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| || |||||  ||  ||||||| | |||||||||||| ||||||    
T  15059125 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgtcaaaaatataaaagatcttacacaaaaatatctggtgcaa 15059214  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 23343940 - 23343851
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||| | ||||||||  ||  ||||| | | |||||||||||||||||||    
T  23343940 aaagattgagtcttggagcaaaagaaaggagaattggagctgatgcgtgccaaaaatataaaagattttacacaaaaatatcttgtgcaa 23343851  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 24164708 - 24164789
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatc 174  Q
    ||||||| ||||||||||||||||||||  ||| || ||| ||||| | |||||||  ||||||||||  | ||||||||||    
T  24164708 gaaagattgagtcttggagcaaaagaaaggagatttggagatgattgaagccaaaaatatgaagatcttgtgcaaaaatatc 24164789  T

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Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 8648624 - 8648728
Alignment:
Q  134 tgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgc 233  Q
    |||||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |    
T  8648624 tgattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttac 8648723  T
Q  234 ccttt 238  Q
    |||||    
T  8648724 ccttt 8648728  T

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Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 39286973 - 39286843
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 201  Q
    |||||||||||||||||||  ||| || ||||| |||||||||||||  ||||||||||||| |||||| || |||||||||||||||| |||||||||     
T  39286973 agtcttggagcaaaagaaaggagatttggagcttattcatgccaaaaatatgaagatctcatgcaaaaa-atattgtgcaaagaatttggagatcttgtg 39286875  T
Q  202 caaaaatataacaagtggcgcgccccttttgc 233  Q
    |||||||||||||||||||||  |||||||||    
T  39286874 caaaaatataacaagtggcgcaacccttttgc 39286843  T

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Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 93 - 231
Target Start/End: Complemental strand, 30819438 - 30819301
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||  |||||||||| |||||||||||| |||||||||||| |||||    
T  30819438 gaaagattgagtcttagagcaaaagaaatgagaattggagctgattcatgccaaaaatatgaagatcttatacaaaaatatattgtgcaaagaaattgaa 30819339  T
Q  193 gatcttgtacaaaaatataacaagtggcgcgcccctttt 231  Q
    |||| |  || ||||||||| |  |||||||||||||||    
T  30819338 gatccttcaccaaaatataa-agatggcgcgcccctttt 30819301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 20412019 - 20412122
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 234  Q
    ||||||||| ||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||| |||||| ||    
T  20412019 gattcatgcaaaaaatatgaagatctcatacaaaaatatctggtgcaaagaaattgaagatcttgtgcaaaaatataacaagtggtgcgctccttttacc 20412118  T
Q  235 cttt 238  Q
    ||||    
T  20412119 cttt 20412122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 44538041 - 44538116
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  44538041 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 44538116  T

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Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 20411928 - 20412017
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  || |||||||||| ||||||||| ||||||||    
T  20411928 gaaagatggagtcttggagcaaaagaaacgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaa 20412017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 16382448 - 16382344
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 193  Q
    |||||| ||||||||||||||||||||| ||| || |||||||||  ||||||||  ||||||||||  | ||||||||||||||||||| | |||||||    
T  16382448 aaagattgagtcttggagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagatcttgtgcaaaaatatcttgtgcaaaaagtttgaag 16382349  T
Q  194 atctt 198  Q
    |||||    
T  16382348 atctt 16382344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 17716529 - 17716604
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  17716529 atgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 17716604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 52236162 - 52236088
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 226  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  52236162 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccc 52236088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 25405378 - 25405274
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 193  Q
    |||||| ||||||||||||||||||||  ||| || |||||||||  ||||||||  |||||||||| ||||| |||||||||||||||| | || ||||    
T  25405378 aaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatatgaagatcttatacagaaatatcttgtgcaaaaagttagaag 25405279  T
Q  194 atctt 198  Q
    |||||    
T  25405278 atctt 25405274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 16431345 - 16431419
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 226  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  16431345 atgaatatttcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccc 16431419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 8648545 - 8648623
Alignment:
Q  104 tcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||| ||||||||| ||||||||    
T  8648545 tcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaa 8648623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 43998192 - 43998313
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 201  Q
    |||||||||||||||||||  |||||||||||| || ||||||||||  |||||||||||||               ||||||||||||||||||||||     
T  43998192 agtcttggagcaaaagaaaggagaattagagcttatccatgccaaaagtatgaagatctcat---------------gcaaagaatttgaagatcttgtg 43998276  T
Q  202 caaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    |||||||||| ||||||||||| ||||||| ||||||    
T  43998277 caaaaatatatcaagtggcgcgacccttttacccttt 43998313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 48256089 - 48256164
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||| ||||||||||    
T  48256089 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagaacttgtacaaatata-cacaagaggcgcgcccc 48256164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 26134815 - 26134756
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 210  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  26134815 atgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatat 26134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 48255982 - 48256071
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||||||| |||||| ||| ||||  ||  ||||||| |||||||||||||| ||||||    
T  48255982 aaagattgagtcttggagcaaaagaaaggagaattagagttgattcgtgcaaaaaatataaaagatcttatacaaaaatatctggtgcaa 48256071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 16431238 - 16431327
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| | ||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  16431238 aaagattgggtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 16431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 17716422 - 17716511
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||   ||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  17716422 aaagattgagtcttggagcaaaagaaaggcgaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 17716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 44537934 - 44538023
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| ||| ||| || ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  44537934 aaagattgagtcttggagcaaaagaaaggagaattggagttgaatcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 44538023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 52236261 - 52236180
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  52236261 agtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatttggtgcaa 52236180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 26134922 - 26134868
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||    
T  26134922 aaagattgagtcttagagcaaaagaaaggagaatttgagctgattcgtgccaaaa 26134868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 20861179 - 20861115
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagat 158  Q
    |||||| ||||||||||||||||||||| | | || ||||||||||  |||||||  ||||||||    
T  20861179 aaagattgagtcttggagcaaaagaaatgatattttgagctgattcgggccaaaaatatgaagat 20861115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 10730915 - 10731021
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 234  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||    
T  10730915 gattcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgccccttttacc 10731014  T
Q  235 ctttgct 241  Q
     ||||||    
T  10731015 ttttgct 10731021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 10944684 - 10944790
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 234  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||    
T  10944684 gattcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgccccttttacc 10944783  T
Q  235 ctttgct 241  Q
     ||||||    
T  10944784 ttttgct 10944790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 38651866 - 38651983
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 193  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||    
T  38651866 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcatgccaaaaatattaagatcttatacaaaaatatcttgtgcaaagaattggaag 38651965  T
Q  194 atcttgtacaaaaatata 211  Q
    ||||||| | ||||||||    
T  38651966 atcttgtgccaaaatata 38651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 24125512 - 24125437
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  24125512 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24125437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 45233987 - 45233914
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 225  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  45233987 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgcc 45233914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 11889393 - 11889309
Alignment:
Q  101 gagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    ||||||||||||||||||||  |||||| ||||| |||||||||||||  |||||||||||||| |||||||| || ||||||||    
T  11889393 gagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatataaaaatatattatgcaaaga 11889309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 11902916 - 11902856
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  11902916 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtaccaatatata 11902856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 15409830 - 15409905
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||    
T  15409830 atgaatatctcatacaaaaatatcatgtgcaaagagtttgaagatcttgtacaataatataa-aagtggcacgcccc 15409905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 31593671 - 31593746
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  31593671 atgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 31593746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 45244556 - 45244498
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaata 209  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  45244556 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataata 45244498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 21275031 - 21275092
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa 212  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  21275031 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgttcaataatataa 21275092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 13622011 - 13622099
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||    ||||||| |||||||||||||| ||||||    
T  13622011 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatgtaaaagatcttatacaaaaatatctggtgcaa 13622099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 13622109 - 13622171
Alignment:
Q  164 acaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  13622109 acaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 13622171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 3772497 - 3772439
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaata 209  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  3772497 atgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataata 3772439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 11903023 - 11902934
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  11903023 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 11902934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 11889294 - 11889249
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 196  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||    
T  11889294 atgaagatctcataccaaaatatcttctgcaaagaatttgaagatc 11889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 15409723 - 15409812
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| | |||||||||||| ||||||    
T  15409723 aaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 15409812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 45234094 - 45234005
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| |||||||||||||||| |||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  45234094 aaagattgagtcttggagcaaaaaaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 45234005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 24125618 - 24125538
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatat 173  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||    
T  24125618 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatat 24125538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 5514017 - 5513962
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||  |||||||    
T  5514017 gaaagattgagtcttggagcaaaagaaatgagatttagagctgattcgggccaaaa 5513962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 10730825 - 10730902
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaa 170  Q
    |||||||||||| |||| ||||||||||  |||||| ||||| |||||| ||||||  || |||||||||| ||||||    
T  10730825 gaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagatctcatgcaaaaa 10730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 10944594 - 10944671
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaa 170  Q
    |||||||||||| |||| ||||||||||  |||||| ||||| |||||| ||||||  || |||||||||| ||||||    
T  10944594 gaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagatctcatgcaaaaa 10944671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 6936 - 7036
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 201  Q
    |||||||||||||||||||   ||||| |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  6936 agtcttggagcaaaagaaaggggaattggagctgattcatgccaaaaatatgaagatctcatataaaaatatcttgtgcaaagaattagaagatcttgta 7035  T
Q  202 c 202  Q
    |    
T  7036 c 7036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 19839 - 19751
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcg 223  Q
    ||||| ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19839 gattcgtgccaaaaatatgaagatctcatacaaaaatttcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcg 19751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 19930 - 19850
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 173  Q
    ||||||||||||||||||| ||||||||  |||||| ||||| |||||||||||||  || |||||||||| |||||||||    
T  19930 gaaagatggagtcttggagaaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatat 19850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 10058 - 9973
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgccct 236  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  10058 atgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttaccct 9973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 14351944 - 14351853
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    |||||| |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  14351944 gattcaagccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 14351853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 24967045 - 24967136
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||| ||||  |||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  24967045 gattcatgcaaaaaatatgaagatatcatactaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24967136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 18161799 - 18161873
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  18161799 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccc 18161873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 21319158 - 21319275
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 193  Q
    |||||| || ||||||||||||| |||  ||||||  ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||| || |||    
T  21319158 aaagattgaatcttggagcaaaaaaaaggagaattgaagctgattcgtgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattaaag 21319257  T
Q  194 atcttgtacaaaaatata 211  Q
    || |||||| | ||||||    
T  21319258 atgttgtactagaatata 21319275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 24341774 - 24341877
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 192  Q
    ||||||| ||||||| ||||||||||||| ||| || |||||||||  ||||||||  |||||||||| |||||||||||||||||||||| | ||||||    
T  24341774 gaaagattgagtcttagagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaaaagtttgaa 24341873  T
Q  193 gatc 196  Q
    ||||    
T  24341874 gatc 24341877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 24966954 - 24967046
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||| | ||||  || |||||||||| ||||||||| || ||||||||    
T  24966954 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatacaaaaaatataaagatctcatgcaaaaatatattttgcaaaga 24967046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 10141 - 10060
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaa 183  Q
    |||||||||||||||||||  | |||| ||| | |||||||||||||  ||||||||||||| ||||||||| |||||||||    
T  10141 agtcttggagcaaaagaaaggaaaattggagtttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaaa 10060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 14352033 - 14351943
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    |||||| |||||||||||||||||||   |||||| ||||| |||||||||||||| || ||||||| || |||||| || |||||||||||    
T  14352033 aaagattgagtcttggagcaaaagaagggagaattggagcttattcatgccaaaattataaagatcttatgcaaaaa-atattgtgcaaaga 14351943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 18161692 - 18161781
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaa-aatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||| |||    ||||||| |||||||||||||| ||||||    
T  18161692 aaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaacaatataaaagatcttatacaaaaatatctggtgcaa 18161781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 24221986 - 24221905
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatc 174  Q
    ||||||| ||||||||||||||||||||  ||| |||||||| ||| | |||||||  ||||||||||  | ||||||||||    
T  24221986 gaaagatcgagtcttggagcaaaagaaaggagatttagagctaattgaggccaaaaatatgaagatcttgtgcaaaaatatc 24221905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 9182 - 9079
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 234  Q
    ||||||||||||||  ||||||||||||| ||||||| | |||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||| ||    
T  9182 gattcatgccaaaaatatgaagatctcatgcaaaaatctattgtgcaaagaatttgaacatcttgtcaaaaaatataacaagtggcgcgacccttttacc 9083  T
Q  235 cttt 238  Q
    ||||    
T  9082 cttt 9079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 9264 - 9193
Alignment:
Q  102 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 173  Q
    |||||||||||||||||||  |||||| ||||| |||||||||| ||  ||||||||||||| |||||||||    
T  9264 agtcttggagcaaaagaaaggagaattggagcttattcatgccataaatatgaagatctcatgcaaaaatat 9193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 23140379 - 23140287
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  23140379 gaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 23140287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 23552169 - 23552077
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 185  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  23552169 gaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 23552077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 24507110 - 24507185
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  24507110 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24507185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 44997996 - 44998072
Alignment:
Q  136 attcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa 212  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  44997996 attcatgccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa 44998072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 25481177 - 25481250
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 225  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  25481177 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcc 25481250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 25488783 - 25488856
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 225  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  25488783 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcc 25488856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 15583502 - 15583594
Alignment:
Q  104 tcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 196  Q
    ||||||||||||| |||  |||||| |||||||||| ||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||    
T  15583502 tcttggagcaaaataaaggagaattggagctgattcgtgccaaaaatatgaagatcttatacaaaaatatcttgcgcaaagaatttgaagatc 15583594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 23140288 - 23140197
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||||||||  ||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||    
T  23140288 gattcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgcccc 23140197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 23552078 - 23551987
Alignment:
Q  135 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||||||||  ||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||    
T  23552078 gattcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgcccc 23551987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 29568890 - 29568801
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||| ||||||| ||||  |||||| ||||| |||||||||||||  |||||||||||||| |||||||||||||||||    
T  29568890 gaaagatggagtcttcgagcaaaggaaaggagaattggagctaattcatgccaaaaatatgaagatctcatataaaaatatcttgtgcaa 29568801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 29568798 - 29568738
Alignment:
Q  136 attcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 196  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29568798 attcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 29568738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 25859045 - 25858962
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatctt 176  Q
    ||||||||||||||||||||||||||||  ||||||  |||||||||||| |||||  ||||||||||||||||||| ||||||    
T  25859045 gaaagatggagtcttggagcaaaagaaaggagaattgaagctgattcatgtcaaaaatatgaagatctcatacaaaactatctt 25858962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 32441688 - 32441634
Alignment:
Q  157 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32441688 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaatatata 32441634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 16134476 - 16134407
Alignment:
Q  157 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||| ||||||    
T  16134476 atctcatacaaaaatatcatgtgcaaagaatttgaagatattgtacaataatataa-aagtggcacgcccc 16134407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 44997904 - 44997994
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaa 183  Q
    ||||||||||||||| ||||||||||||  ||||||  |||| |||||||||||||  || |||||||||| ||||||||| |||||||||    
T  44997904 gaaagatggagtctttgagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaa 44997994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 20281829 - 20281889
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  20281829 atgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttttacaaatatata 20281889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 25337523 - 25337421
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 193  Q
    |||||| |||||||||||||||||||   ||| || |||||||||  ||||||||  |||||||||| |||||||||||| ||||||| | | |||||||    
T  25337523 aaagattgagtcttggagcaaaagaatggagatttggagctgatttgtgccaaaaatatgaagatcttatacaaaaatatattgtgcataaagtttgaag 25337424  T
Q  194 atc 196  Q
    |||    
T  25337423 atc 25337421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 19927200 - 19927253
Alignment:
Q  157 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 210  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  19927200 atctcatacaaaaatatcctgcgcaaagaatttgaagatcttgtacaaatatat 19927253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 25858907 - 25858861
Alignment:
Q  192 agatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 238  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  25858907 agatcttgtacaaaaatataacaagtggcgcgcccctattgtccttt 25858861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 19927087 - 19927176
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| |||||||||||||||||||||  ||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  19927087 aaagattgagtcttggagcaaaagaaatttgaatttgagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 19927176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 20281730 - 20281811
Alignment:
Q  101 gagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||||||||||||||||||  |||||| |||||||||| |||||||||    || |||| |||||||||||||| ||||||    
T  20281730 gagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatataaaacatcttatacaaaaatatctggtgcaa 20281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 32441801 - 32441712
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||| |||||||||| ||||||    
T  32441801 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatagaaaaatatctggtgcaa 32441712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 24507003 - 24507085
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatct 175  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||||    
T  24507003 aaagattgagtctttgagcaaaagaaaagagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatct 24507085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 11390846 - 11390935
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| | ||||||  ||  ||||||| |||||||||||| | ||||||    
T  11390846 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaagatcttatacaaaaatatttggtgcaa 11390935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 11407507 - 11407596
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| | ||||||  ||  ||||||| |||||||||||| | ||||||    
T  11407507 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaagatcttatacaaaaatatttggtgcaa 11407596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 16134589 - 16134500
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| |||||||||||||||||||  || |||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  16134589 aaagattgagtcttggagcaaaagaaggaaaaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 16134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 24371875 - 24371795
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 173  Q
    ||||||| ||||||||||| ||||||||  ||| || ||||||||| | |||||||  ||||||||||  | |||||||||    
T  24371875 gaaagattgagtcttggagaaaaagaaaggagatttggagctgattgaggccaaaactatgaagatcttgtgcaaaaatat 24371795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 10100 - 10025
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  10100 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 10206 - 10126
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatat 173  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||    
T  10206 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatat 10126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 9381 - 9306
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  9381 atgaatatctcatacaaaaatatcatgtgaaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 9488 - 9399
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaa-gatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| |||||||| || ||||||||  |||||| ||| |||||| ||||||||  ||||| ||||| |||||||||||||| ||||||    
T  9488 aaagattgagtcttgcagaaaaagaaaggagaattggagttgattcgtgccaaaaatatgaaagatcttatacaaaaatatctggtgcaa 9399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 19234 - 19159
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  19234 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgaacaataatataa-aagtggcgcgcccc 19159  T

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Target: scaffold0251; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 19341 - 19252
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||| ||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  19341 aaagattgagtcttggagcaaatgaaaagagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 19252  T

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Target: scaffold0713 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 7040 - 6950
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaa 183  Q
    ||||||||||||||| ||||||||||||  |||||| ||||| |||| ||| ||||  |||||||||| ||||||||||||||||||||||    
T  7040 gaaagatggagtcttagagcaaaagaaaggagaattggagctaattcgtgcaaaaaatatgaagatctgatacaaaaatatcttgtgcaaa 6950  T

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Target: scaffold0713; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 6961 - 6922
Alignment:
Q  194 atcttgtacaaaaatataacaagtggcgcgccccttttgc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  6961 atcttgtgcaaaaatataacaagtggcgcgccccttttgc 6922  T

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Target: scaffold0064 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 48589 - 48662
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 225  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  48589 atgaatatcccatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcc 48662  T

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Target: scaffold0064; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 48482 - 48561
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatg-aagatctcatacaaaaata 172  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||| ||||||| |||||||||||    
T  48482 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaaagatcttatacaaaaata 48561  T

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Target: scaffold0058 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 61654 - 61718
Alignment:
Q  162 atacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  61654 atacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgcccc 61718  T

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Target: scaffold0058; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 182
Target Start/End: Original strand, 61542 - 61630
Alignment:
Q  95 aagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    ||||| ||||||||||||||||||||  |||||| |||||||||| | ||||||  ||  ||||||| |||||||||||||| ||||||    
T  61542 aagattgagtcttggagcaaaagaaaggagaattggagctgattcgttccaaaaatataaaagatcttatacaaaaatatctggtgcaa 61630  T

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Target: scaffold0057 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 20958 - 21018
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  20958 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 21018  T

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Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 20851 - 20940
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||  ||||| |||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  20851 aaagattgagtcttggagcaaaagaaaggagaatcggagctaattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 20940  T

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Target: scaffold0031 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 23063 - 23117
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaa 205  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23063 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaa 23117  T

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Target: scaffold0031; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 100168 - 100229
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa 212  Q
    ||||| || ||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  100168 atgaatatgtcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataatataa 100229  T

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Target: scaffold0031; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 22956 - 23045
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  ||||||  ||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  22956 aaagattgagtcttggagcaaaagaaaggagaattgcagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 23045  T

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Target: scaffold0031; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 100061 - 100150
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| | |||||||||||| ||||||    
T  100061 aaagattgagtcttggagcaaaagaaaggagaattggagcttattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 100150  T

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Target: scaffold0916 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 3289 - 3364
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| || ||| ||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  3289 atgaatatatcacacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 3364  T

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Target: scaffold0916; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 3182 - 3271
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||  |||||||||||||| ||||||    
T  3182 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcatatacaaaaatatctggtgcaa 3271  T

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Target: scaffold0360 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 121 - 39
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatg-aagatctcatacaaaaatatct 175  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||| ||||||| ||||||||||||||    
T  121 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaaagatcttatacaaaaatatct 39  T

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Target: scaffold0096 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 38224 - 38167
Alignment:
Q  169 aatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 227  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  38224 aatattttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgcccc 38167  T

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Target: scaffold0096; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 38264 - 38210
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaa 205  Q
    ||||| ||||||||||||||||| |||||||||||||||||| || |||| ||||    
T  38264 atgaatatctcatacaaaaatattttgtgcaaagaatttgaatattttgtgcaaa 38210  T

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Target: scaffold0197 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 9169 - 9109
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 211  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  9169 atgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgttcaaatatata 9109  T

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Target: scaffold0197; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 9276 - 9187
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||| ||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  9276 aaagattgagtcttggagcaaatgaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 9187  T

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Target: scaffold0447 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 6217 - 6276
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 210  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  6217 atgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 6276  T

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Target: scaffold0447; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 10831 - 10890
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 210  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  10831 atgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 10890  T

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Target: scaffold0447; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 6132 - 6186
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  6132 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 6186  T

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Target: scaffold0447; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 10746 - 10800
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  10746 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 10800  T

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Target: scaffold0383 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 8826 - 8885
Alignment:
Q  151 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 210  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  8826 atgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 8885  T

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Target: scaffold0383; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 8741 - 8795
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 148  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  8741 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 8795  T

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Target: scaffold0213 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 26667 - 26756
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 182  Q
    |||||| ||||||||||||||||||||  |||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  26667 aaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 26756  T

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Target: scaffold0213; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 21370 - 21456
Alignment:
Q  94 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgca 181  Q
    |||||| ||||||||||||||||||||  ||| || ||| |||||  ||||||||  |||||||||  ||||||||||||||||||||    
T  21370 aaagattgagtcttggagcaaaagaaaggaga-ttggagttgatttgtgccaaaaatatgaagatcatatacaaaaatatcttgtgca 21456  T

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Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 167827 - 167908
Alignment:
Q  93 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatc 174  Q
    ||||||| |||||||||||||||||||||| || || ||||||||| | |||||||  ||||||||||  | ||||||||||    
T  167827 gaaagattgagtcttggagcaaaagaaataggatttggagctgattgaggccaaaaatatgaagatcttgtgcaaaaatatc 167908  T

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