View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10374_low_16 (Length: 245)
Name: NF10374_low_16
Description: NF10374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10374_low_16 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 37379789 - 37379548
Alignment:
| Q |
4 |
ctcttccatcagcctccgcgtggtggaaaaccacagaaaaatacaaggttggatcctctgctcttaccgtagggaaacagttcctacaccctgcttatac |
103 |
Q |
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| T |
37379789 |
ctcttccatcagcctccgcgtggtggaaaaccacagaaaaatacaaggttggatcctctgctcttaccgtagggaaacagttcctacaccctgcttatac |
37379690 |
T |
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| Q |
104 |
acttggaaagaatctaaaaggaaaagatcttctcgctttagctacgaaatttaatgaactctcttctataactgttgtgctaacggcgaaagatgttaac |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37379689 |
acttggaaagaatctaaaaggaaaagatcttctcgctttagctacgaaatttaatgaactctcttctataactgttgtgctaacggcgaaagatgttaac |
37379590 |
T |
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| Q |
204 |
gttgaaggattctgtatgagtcgttgtgggacctatgcttct |
245 |
Q |
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| T |
37379589 |
gttgaaggattctgtatgagtcgttgtgggacccatggttct |
37379548 |
T |
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