View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10374_low_4 (Length: 498)
Name: NF10374_low_4
Description: NF10374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10374_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 1 - 477
Target Start/End: Complemental strand, 15724241 - 15723765
Alignment:
| Q |
1 |
atgtgtacctgtttttgccgtgagggtactctactatagattgttgagcatgtcatgtaagcaaaactggttgtgcccctctcagcgcaaaggccaaacg |
100 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
15724241 |
atgtgtacctgttttttccgtgagggtactctactatagattgttgagcatgtcatgtaagaaaaactggttgtgcccctctcagcgcaaaggccaaacg |
15724142 |
T |
|
| Q |
101 |
attgttcgatcgttttgatggcccgacttggctctgagcgccttattgtctgaagtctgaaccacaactctttgccaacgtaggtggtctgtaatggact |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15724141 |
attgttcgatcgttttgatggcccatcttggctctgagcgccttattgtctgaagtctgaaccacaactctttgccaacgtaggtggtctgtaatggact |
15724042 |
T |
|
| Q |
201 |
tgcctcccttgttgggcctttgattccggggctgagtcatctgactccaggatcgggcattgacctagtccggaaatacagttgaagttgtgaggggtag |
300 |
Q |
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||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
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| T |
15724041 |
tgcctcccttgttgggcctttcattccggggctgaatcatctgactccaggatcgggcattgaccgagtccggaaatacagttgaagttgttaggggtag |
15723942 |
T |
|
| Q |
301 |
aggaaatatgaaagaaagaagatgatttctattctttaacacacatttggttattttatccggattattgtctgaattattttattttggaataattact |
400 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15723941 |
aggaaatatgaaagaaagaagatgattcctattctttaacacacatttggttattttatccggattattgtctgaattattttattttggaataattact |
15723842 |
T |
|
| Q |
401 |
taactttaagtcttcgcttctttttattcttgctaaaccaatgcatttgaaatatttgaactttcctgtatattcat |
477 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15723841 |
taactttaagtcttcgcttctttttattcttgctaaaccaatgcatttgaaatatttgaactttcctgtatattcat |
15723765 |
T |
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