View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10376_high_1 (Length: 412)
Name: NF10376_high_1
Description: NF10376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10376_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 7 - 399
Target Start/End: Original strand, 40807210 - 40807607
Alignment:
| Q |
7 |
atgtgtgcttattagaacttttatgtgtttgatgtatttggactatagtccaattatcttgtgtgttgttgtatgtta----aggttatgtaggatgcta |
102 |
Q |
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| T |
40807210 |
atgtgtgcttattagaacttttatgtgtttgatgtatttggactatagtccaattatcttgtgtgttgttgtatgttagttaaggttatgtaggatgcta |
40807309 |
T |
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| Q |
103 |
tgaacatcccagtgctttatggtttggtgcttaagactaaa-taaacaaccattgttgttgtggtttgctagtaaaatatgtgtggattgtttgaggaag |
201 |
Q |
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| T |
40807310 |
tgaacatcccagtgctttatggtttggtgcttaagactaaaataaacaaccattgttgttgtggtttgctagtaaaatatgtgtggattgtttgaggaag |
40807409 |
T |
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| Q |
202 |
ttgtttagttattttaattggtgattggtttgagttgttgacatttaaaaattggtttgatcttgacagacaaatagaaagccatagaaaattagtaaaa |
301 |
Q |
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| T |
40807410 |
ttgttaagttattttaattggtgattggtttgagttgttgacatttaaaaattggcttgatcttgacagacaaatagaaagccatagaaaattagtaata |
40807509 |
T |
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| Q |
302 |
gaaaagaaggagccaatttgggattggacctataatcattgcaatacttgaatcatattgttgccacgccactaaaattaacaaaaagtatagttcat |
399 |
Q |
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| T |
40807510 |
gaaaagaatgatccaatttgtgattggatctataatcattgccatacttgaatcatattgttgccacgccactaaaattaacaaaaagtatagttcat |
40807607 |
T |
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