View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10376_low_12 (Length: 251)
Name: NF10376_low_12
Description: NF10376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10376_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 12064249 - 12064490
Alignment:
| Q |
1 |
attggttaaatttgcaagttcttctggtatttcgcccgtcaaattgttcgaaaacaactcaattttggaaacatttttcaacttcgaaatcgatctagag |
100 |
Q |
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| T |
12064249 |
attggttaaatttgcaagttcttctggtatttcgcccgtcaaattgttcgaaaacaactcaattttggaaacatttttcaacttcaaaatcgatctagag |
12064348 |
T |
|
| Q |
101 |
attttgccagataacttgtttcttgacaaatccaaagtcttcaatgcttccatttcatatattgattctggaatctctcctatcaaatgtgaaccaccaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
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| T |
12064349 |
attttgccagataacttgtttcttgacaaatccaaagtcttcaatgcttccatttcatatattgattctggaatctctcctttcaaatgagaaccaccaa |
12064448 |
T |
|
| Q |
201 |
gataaagccaagtcaaattcttcaaatctccaagactctctg |
242 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
12064449 |
gataaagccaagtcaaattcttcaaatctccaagactctctg |
12064490 |
T |
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