View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10376_low_19 (Length: 227)
Name: NF10376_low_19
Description: NF10376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10376_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 1496576 - 1496366
Alignment:
| Q |
1 |
agattcataaaacccatcaacactcccaattaacttcaccacttgcaaattcttacacgccgctacaccacgtaaaacatcgtcgttacacttctgcaac |
100 |
Q |
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| T |
1496576 |
agattcataaaacccatcaacactcccaattaacttcaccacttgcaaattcttacacgccgctacaccacgtaaaacatcgtcgttacacttctgcaac |
1496477 |
T |
|
| Q |
101 |
tccaattccatcaatgtaacacactcttccccaatactaaccaacccctcttcactcccacctgttaccttcaacttccgtaaattcggacacccttttg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
1496476 |
tccaattccatcaatgtaacacactcttccccaatactaaccaacccctcttcactcccacctgttaccttcaacttccgtaaatttggacacccttttg |
1496377 |
T |
|
| Q |
201 |
ctacttctttc |
211 |
Q |
| |
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||||||||||| |
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| T |
1496376 |
ctacttctttc |
1496366 |
T |
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