View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10378_high_14 (Length: 216)
Name: NF10378_high_14
Description: NF10378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10378_high_14 |
 |  |
|
| [»] scaffold0010 (1 HSPs) |
 |  |  |
|
| [»] scaffold0151 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 26951699 - 26951882
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26951699 |
tgtgtagtccaacagcttcccccacctctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
26951798 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26951799 |
gcccaacccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccggtttcttccaaac |
26951882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 21276654 - 21276829
Alignment:
| Q |
25 |
ccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaac |
124 |
Q |
| |
|
|||||| | |||||||||||||||||||||| |||| |||||||||||||||||||||| |||||| ||||||| |||||||||||| |||||||||| | |
|
|
| T |
21276654 |
ccaacaacctcccccacatctatatcacaaagagggtcaaaccattctgttcttgcaagaacaaaaccaccatcctcatccctaagatacatgcccaagc |
21276753 |
T |
 |
| Q |
125 |
caaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
21276754 |
caacccagttaagagaagtggaaaaggatgcatcaatattgcatttgtacctgccaggtgccggtttcttccaaac |
21276829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 18178974 - 18178792
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||| ||||||||||| ||||| |||||||||||||||| || |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
18178974 |
tgtgcagtccaacagcctcccc-acatctatatcacaaagtggagcaaaccattttgttcttgcaagaacaaaagcaccatcaacatccctaagacacat |
18178876 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
||| |||||||||||||||||| |||| ||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||| |
|
|
| T |
18178875 |
gcctaaaccaaccctgttaagaaaagtggaaaaggatgcatcaatattgcatttgtaccttccaggtgccggtttcttccaaac |
18178792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 33324554 - 33324422
Alignment:
| Q |
24 |
tccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaa |
123 |
Q |
| |
|
|||||| || || ||||| |||| |||||||| |||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| || | |
|
|
| T |
33324554 |
tccaaccgcctctcccacctctacatcacaaagagggt-aaaccattccgttcttgcaagaacaaatgcaccatcatcatccctaagacacataccgagt |
33324456 |
T |
 |
| Q |
124 |
ccaaccctgttaagagaagtagaaaaggatgcat |
157 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||| |
|
|
| T |
33324455 |
ccaaccctgttatgagaagtggaaaaggatgcat |
33324422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 9809043 - 9809155
Alignment:
| Q |
85 |
acaaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtg |
184 |
Q |
| |
|
|||||| |||| ||||||| |||||| |||| |||||||| | | | |||||||| ||||||||||| || ||||| || ||||||||||| |||| || |
|
|
| T |
9809043 |
acaaaatcacctgcatcatctctaagatacattcccaaacctatcatattaagagaggtagaaaaggacgcgtcaatattacatttatacctaccagatg |
9809142 |
T |
 |
| Q |
185 |
ccgatttcttcca |
197 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
9809143 |
ccggtttcttcca |
9809155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 11911668 - 11911794
Alignment:
| Q |
61 |
gcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaa |
160 |
Q |
| |
|
|||||||| |||||| |||||| |||||| ||||| || ||| ||||||||||| | ||| || ||| | ||||| |||| |||||||| ||||||| |
|
|
| T |
11911668 |
gcaaaccaatctgtttgtgcaaggacaaaatcaccagtattatctctaagacacattctcaacccgaccttattaagtgaagaggaaaaggaggcatcaa |
11911767 |
T |
 |
| Q |
161 |
tgttgcatttatacctgccaggtgccg |
187 |
Q |
| |
|
||||| ||||| ||| |||||||||| |
|
|
| T |
11911768 |
tgttgtatttactcctaccaggtgccg |
11911794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 255624 - 255807
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
255624 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattacgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
255723 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
255724 |
gcccaaaccaaccctgttaaaagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccggtttcttccaaac |
255807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 168; Significance: 3e-90; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 23059600 - 23059783
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23059600 |
tgtgtagcccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
23059699 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
23059700 |
gcccaacccaaccttgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccggtttcttccaaac |
23059783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 9631963 - 9632062
Alignment:
| Q |
98 |
catcatccctaagacacatgcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttcca |
197 |
Q |
| |
|
||||||| ||||||||||| || |||| ||||| |||||||| |||||||||||||||||||| || ||||||||||| |||| ||||| ||||||||| |
|
|
| T |
9631963 |
catcatctctaagacacattccaaaacataccctattaagagaggtagaaaaggatgcatcaatattacatttataccttccagatgccggtttcttcca |
9632062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 37836680 - 37836836
Alignment:
| Q |
28 |
acagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaa |
127 |
Q |
| |
|
||||| |||||| ||||||||||||| ||| |||||||| |||| ||||||| |||||| || || ||||||| | ||||||||| |||||||| | |
|
|
| T |
37836680 |
acagcctcccccgcatctatatcacacgaaggagcaaaccagattgtttttgcaagaacaaaatcatcagcatcatctccaagacacattcccaaaccga |
37836779 |
T |
 |
| Q |
128 |
ccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtg |
184 |
Q |
| |
|
|| | |||||||| || |||||||||| |||||||| ||||||||| || |||||| |
|
|
| T |
37836780 |
ccttattaagagatgtgaaaaaggatgcgtcaatgttacatttatacatgtcaggtg |
37836836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 35096794 - 35096687
Alignment:
| Q |
34 |
tcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgt |
133 |
Q |
| |
|
||||| |||||||||||||| | ||| ||||||||||| || ||||||| |||||| ||||| ||||||| ||||||||||| ||||| ||||| || | |
|
|
| T |
35096794 |
tcccctacatctatatcacacaaaggagcaaaccattccgtctttgcaagaacaaaaacaccaacatcatctctaagacacatacccaatccaactctat |
35096695 |
T |
 |
| Q |
134 |
taagagaa |
141 |
Q |
| |
|
|||||||| |
|
|
| T |
35096694 |
taagagaa |
35096687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 17283824 - 17283959
Alignment:
| Q |
61 |
gcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaa |
160 |
Q |
| |
|
|||||| | |||||| | ||||| |||||| |||| ||||||| |||||||||| ||||||| || || || ||||| |||||||||||||| | || |
|
|
| T |
17283824 |
gcaaacgaatctgttttggcaagaacaaaatcacctgcatcatctctaagacacaataccaaacctactctattgagagaggtagaaaaggatgcgtaaa |
17283923 |
T |
 |
| Q |
161 |
tgttgcatttatacctgccaggtgccgatttcttcca |
197 |
Q |
| |
|
| || |||||||| ||||||| ||| | ||||||||| |
|
|
| T |
17283924 |
tattacatttata-ctgccagatgctggtttcttcca |
17283959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 12129361 - 12129178
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12129361 |
tgtgtagtccaacagcttcccccacatctataacacaaatagggacaaaccattatgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
12129262 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||| |
|
|
| T |
12129261 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgtcggtttctttcaaac |
12129178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 10325370 - 10325505
Alignment:
| Q |
62 |
caaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaat |
161 |
Q |
| |
|
||||||| ||| || ||||||| ||||| ||||| |||||| ||||| ||||| ||||||| |||||| |||||||| || ||||||||||||||||| |
|
|
| T |
10325370 |
caaaccagtctttttttgcaagagcaaaatcaccagaatcatctctaaggcacattcccaaacgaaccctattaagagaggtggaaaaggatgcatcaat |
10325469 |
T |
 |
| Q |
162 |
gttgcatttatacctgccaggtgccgatttcttcca |
197 |
Q |
| |
|
||| ||||| ||||||||| ||||||||||||||| |
|
|
| T |
10325470 |
gttacatttgtacctgccatttgccgatttcttcca |
10325505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 20492253 - 20492156
Alignment:
| Q |
98 |
catcatccctaagacacatgcccaaaccaaccctgttaagagaagtag-aaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttctt |
194 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||| |||||||| |||| |||| |||| ||||| || ||||||||||| || | ||||| |||||| |
|
|
| T |
20492253 |
catcatctctaagacacattcccaaacctaccctattaagagaggtagaaaaaaaatgcgtcaatattacatttatacctccctgatgccggtttctt |
20492156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 9451312 - 9451244
Alignment:
| Q |
17 |
tgtgtagtccaacagcttccc-ccacatctatatcacaaataggggcaaaccattctgttcttgcaagt |
84 |
Q |
| |
|
|||||| || |||||| |||| |||||||||||||| ||| |||||||||||||| |||||||||||| |
|
|
| T |
9451312 |
tgtgtaatcgaacagcctccctccacatctatatcataaagaggggcaaaccatttcgttcttgcaagt |
9451244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 36677349 - 36677297
Alignment:
| Q |
145 |
gaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttcca |
197 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||| || ||||||||| |
|
|
| T |
36677349 |
gaaaaggagacatcaatgttgcatttatacctgccatgtgtcggtttcttcca |
36677297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 31957330 - 31957413
Alignment:
| Q |
92 |
caccatcatcatccctaagacacatgcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacc |
175 |
Q |
| |
|
||||| |||||| ||||| |||||| ||||| || ||| ||||||| || | ||| ||||| ||||||||||| |||||||||| |
|
|
| T |
31957330 |
caccagcatcattcctaatacacattcccaagcctaccttgttaagtgatggagagaaggaggcatcaatgttacatttatacc |
31957413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 26731130 - 26731313
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
26731130 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattatgttcttgcaagtacaaaaacaccatcatcatccctaagacacat |
26731229 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26731230 |
gcccaaaccaaccctgttaggagaaatagaaaatgatgcatcaatgttgcatttatacctgccaggtgccggtttcttccaaac |
26731313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 47703994 - 47704177
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
47703994 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgctcttgcaagtacaaaagcaccattatcatccctaagacacat |
47704093 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
|||||| |||||| |||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
47704094 |
gcccaacccaaccatgttaagagaagtaaagaaggatgcatctatgttgcatttatacctgccaggtgccggtttcttccaaac |
47704177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 1017885 - 1018041
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
1017885 |
tgtgtagtcccacagcttcccccacatctatatcacaaataggggcaaactattttgttcttgcaagtacaaaagcaccatcatcatccctaagacgcat |
1017984 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttata |
173 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1017985 |
gcccaaaccaaccttgttaagagaagtagaaaaggatgcatcaatgttgcatttata |
1018041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 10346753 - 10346923
Alignment:
| Q |
28 |
acagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaa |
127 |
Q |
| |
|
||||| ||||| |||||||||||||| | ||| ||||||||||| || ||||||| |||||| ||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
10346753 |
acagcctcccctacatctatatcacagagaggagcaaaccattccgtctttgcaagaacaaaaacaccaacatcatctctaagacacatgcccaaaccag |
10346852 |
T |
 |
| Q |
128 |
ccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaa |
198 |
Q |
| |
|
|| | |||||| |||| ||||| |||||||| |||||||||||||||||||| |||||| ||| |||||| |
|
|
| T |
10346853 |
ccatattaagataagtggaaaaagatgcatctatgttgcatttatacctgccttgtgccggttttttccaa |
10346923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 20916142 - 20916090
Alignment:
| Q |
145 |
gaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttcca |
197 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||| | |||| ||||||||| |
|
|
| T |
20916142 |
gaaaaggatgcatcaatgttacatttgtacctgccaagcgccggtttcttcca |
20916090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 20925104 - 20925052
Alignment:
| Q |
145 |
gaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttcca |
197 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||| | |||| ||||||||| |
|
|
| T |
20925104 |
gaaaaggatgcatcaatgttacatttgtacctgccaagcgccggtttcttcca |
20925052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 156; Significance: 5e-83; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 28590211 - 28590394
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28590211 |
tgtgtagtccaacagcttcccccgcatctatatcacaaatatgggcaaaccattttgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
28590310 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
28590311 |
gcccaacccaaccctgttaagagaagtagagaaggatgcatctatgttgcatttatacctgccaggtgccggtttcttccaaac |
28590394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 41316124 - 41316233
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41316124 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
41316223 |
T |
 |
| Q |
117 |
gcccaaacca |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
41316224 |
gcccaaacca |
41316233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 10977602 - 10977428
Alignment:
| Q |
24 |
tccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaa |
123 |
Q |
| |
|
|||||| || || |||||||||| |||||||| ||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||| || | |
|
|
| T |
10977602 |
tccaaccgcctctcccacatctacatcacaaagaggggaaaaccatcatgttcttgcaagaacaaacgcaccatcatcatccctaagacacataccgagt |
10977503 |
T |
 |
| Q |
124 |
ccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaa |
198 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
10977502 |
ccaaccctgttaagagaagtggaaaatgatgcatcaatgttgcatttatacctgccagatgccggcttcttccaa |
10977428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 24275094 - 24274911
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
24275094 |
tgtgtagtccaacagcttcccccacacctatatcacaaataggggcaaaccattatgttcttgcaagtacagaagcaccatcatcatccctaagacacat |
24274995 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
24274994 |
gtccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgctgcatttatatctgccagatgccggtttcttccaaac |
24274911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 24387119 - 24387302
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
24387119 |
tgtgtagtccaacagcttcccccacacctatatcacaaataggggcaaaccattatgttcttgcaagtacagaagcaccatcatcatccctaagacacat |
24387218 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
24387219 |
gtccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgctgcatttatatctgccagatgccggtttcttccaaac |
24387302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 30304673 - 30304532
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30304673 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcgccatcatcatccctaagacacat |
30304574 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatc |
158 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
30304573 |
gcccaacccaaccctgttaagagaagtagaaaaggatgcatc |
30304532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 24870282 - 24870101
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||| |
|
|
| T |
24870282 |
tgtgtagtccaacagcctcccccaaatctatatcacaaagaggggcaaaccattctgttcttacaagaacaaaaataccatcatcatccctataacacat |
24870183 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaa |
198 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
24870182 |
gcccaaaccaaccttgttaagagaagtggaaaatgatgcatcaatgttgcatttatacctgccaagtgccggtttcttccaa |
24870101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 8703810 - 8703919
Alignment:
| Q |
86 |
caaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgc |
185 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| ||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8703810 |
caaaagcaccatcgtcatccctaaggcacatgcccagaccaaccctctgaagagaagcagaaaaagatgcatcaatgttgcatttatacctgccaggtgc |
8703909 |
T |
 |
| Q |
186 |
cgatttcttc |
195 |
Q |
| |
|
|| ||||||| |
|
|
| T |
8703910 |
cggtttcttc |
8703919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 7211851 - 7211883
Alignment:
| Q |
141 |
agtagaaaaggatgcatcaatgttgcatttata |
173 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |
|
|
| T |
7211851 |
agtagaaaaggatgcatcaatattgcatttata |
7211883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 120; Significance: 1e-61; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 27877553 - 27877370
Alignment:
| Q |
17 |
tgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacat |
116 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| |
|
|
| T |
27877553 |
tgtgtagaccaacagcctcccccacatctatatcacaaagaggggcaaaccattctgttcttgcaagcacaaaagcatcatcctcatccctaagacacat |
27877454 |
T |
 |
| Q |
117 |
gcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
|||||| ||||| |||||| |||||| ||||||||||||||||| |||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
27877453 |
gcccaagccaactatgttaaaagaagttgaaaaggatgcatcaatattgcatttgtatctgccaggtgctggtttcttccaaac |
27877370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 10395618 - 10395801
Alignment:
| Q |
19 |
tgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgc |
118 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10395618 |
tgtagcccaacagtttcccccacatctatatcacaaagaggggcaaactattttgttcttacaagaacaaaagcaccatcatcatccctaagacacatgc |
10395717 |
T |
 |
| Q |
119 |
ccaaacc--aaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
||||| | |||||||||||||||||| |||||||| |||||||||||||||||||||| | |||||||| |||||||||||| |
|
|
| T |
10395718 |
ccaaagcaaaaccctgttaagagaagtggaaaaggaagcatcaatgttgcatttatacccgttaggtgccggtttcttccaaac |
10395801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 195
Target Start/End: Complemental strand, 17321704 - 17321549
Alignment:
| Q |
40 |
acatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgttaagag |
139 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
17321704 |
acatctatatcacaaagaggggcaaaccattttgttcttgtaagaacaaaagcaccatcatcatccctaagacacatgcccagaccaaccctattaagag |
17321605 |
T |
 |
| Q |
140 |
aagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttc |
195 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||| ||| || ||||||| |
|
|
| T |
17321604 |
aagcggaaaatgatgcatcaatgttgcatttatacctgccatgtgtcggtttcttc |
17321549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 198
Target Start/End: Complemental strand, 12538937 - 12538768
Alignment:
| Q |
29 |
cagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaac |
128 |
Q |
| |
|
|||| |||||||| ||||||| |||| ||| |||||| ||| |||||| |||| |||||||||| ||| ||||||||||| |||||||||| |||||| |
|
|
| T |
12538937 |
cagcctcccccacgtctatattgcaaagaggagcaaacaatttcgttcttacaagaacaaaagcacaatcgtcatccctaaggcacatgcccagaccaac |
12538838 |
T |
 |
| Q |
129 |
cctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaa |
198 |
Q |
| |
|
|| ||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12538837 |
ccagttaagagaagaggaaaatgatgcatcagtgttgcatttatacctatcaggtgccgatttcttccaa |
12538768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 39287444 - 39287359
Alignment:
| Q |
92 |
caccatcatcatccctaagacacatgcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctg |
177 |
Q |
| |
|
|||||||||||| | ||||||||| |||||||||||||| |||||||| || ||||||||||||| ||| || ||||| |||||| |
|
|
| T |
39287444 |
caccatcatcatttccaagacacattcccaaaccaaccctattaagagaggtggaaaaggatgcataaattttacatttgtacctg |
39287359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 3601582 - 3601659
Alignment:
| Q |
120 |
caaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttcca |
197 |
Q |
| |
|
|||||| ||||| |||||||| ||||| || |||| ||||| || |||||||||||||||| ||||| ||||||||| |
|
|
| T |
3601582 |
caaacctaccctattaagagaggtagagaaagatgtgtcaatattacatttatacctgccagatgccggtttcttcca |
3601659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 32544613 - 32544735
Alignment:
| Q |
38 |
ccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgttaag |
137 |
Q |
| |
|
|||||||||| ||||| | || |||||||| |||||| | ||||| |||||| || | ||| || ||| | ||||| || ||||| ||||| ||||| |
|
|
| T |
32544613 |
ccacatctatgtcacacaagggagcaaaccagtctgttttggcaagaacaaaatcatctgcatagtctctagggcacattcctaaacctaccctattaag |
32544712 |
T |
 |
| Q |
138 |
agaagtagaaaaggatgcatcaa |
160 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
32544713 |
agaggtagaaaaggatgcatcaa |
32544735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 2114127 - 2114071
Alignment:
| Q |
98 |
catcatccctaagacacatgcccaaaccaaccctgttaagagaagtagaaaaggatg |
154 |
Q |
| |
|
||||||| |||||||||| |||||||| ||| | |||||||| ||||||||||||| |
|
|
| T |
2114127 |
catcatctttaagacacattcccaaacctaccatattaagagaggtagaaaaggatg |
2114071 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 13104626 - 13104808
Alignment:
| Q |
16 |
ctgtgtagtccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacaca |
115 |
Q |
| |
|
|||||||||||| || | ||||| |||||||||||||||| | ||| ||| |||| |||||||||||| ||||||||||||||||| ||| ||| ||||| |
|
|
| T |
13104626 |
ctgtgtagtccatcaacgtccccgacatctatatcacaaagacgggtaaatcattatgttcttgcaagaacaaaagcaccatcatcttccgtaatacaca |
13104725 |
T |
 |
| Q |
116 |
tgcccaaaccaaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaa |
198 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
13104726 |
tgcccaaaccaaccttgttaagagaagtgaaaaaggatgcatcaatgttgcatttatacctgctaggtgccggtttcttccaa |
13104808 |
T |
 |
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Target: chr6; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 32895846 - 32895688
Alignment:
| Q |
40 |
acatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgttaagag |
139 |
Q |
| |
|
|||||||||||||| | ||| ||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
32895846 |
acatctatatcacaga--gggacaaaccattatgttattgcaagcacaaaagcaccatcctcatccctaagacacatgcccaagccaactctgttaagag |
32895749 |
T |
 |
| Q |
140 |
aagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaaac |
200 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
32895748 |
aagttgaaaaggatgcatcaatattgcatttgtaactgccaggtgctggtttcttccaaac |
32895688 |
T |
 |
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Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 27862351 - 27862511
Alignment:
| Q |
37 |
cccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaaccaaccctgttaa |
136 |
Q |
| |
|
||||| |||| ||| |||| |||||||||| |||| ||||||||||| ||||| | |||| ||||||||||| | ||||| |||| |||||| || ||| |
|
|
| T |
27862351 |
cccacctctacatcgcaaagaggggcaaactattccgttcttgcaagaacaaatgtaccaccatcatccctagg-cacatacccagtccaaccatgctaa |
27862449 |
T |
 |
| Q |
137 |
gagaagtagaaaaggatgcatcaatgttgcatttatacctgccaggtgccgatttcttccaa |
198 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||||||||| ||| | ||||||||| |
|
|
| T |
27862450 |
gagaagtggaaaaagatgcatcaatgttgcatttatacctgccaggcgccaacttcttccaa |
27862511 |
T |
 |
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Target: scaffold0151 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0151
Description:
Target: scaffold0151; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 21557 - 21714
Alignment:
| Q |
25 |
ccaacagcttcccccacatctatatcacaaataggggcaaaccattctgttcttgcaagtacaaaagcaccatcatcatccctaagacacatgcccaaac |
124 |
Q |
| |
|
|||||||| ||||| || ||||| ||||||| |||||| |||||||| ||| ||||||| ||||| ||||| ||||||| | ||||||||| ||||||| |
|
|
| T |
21557 |
ccaacagcctcccctacgtctatgtcacaaagaggggcgaaccattccgtttttgcaagaacaaagacaccagcatcatctcgaagacacatacccaaac |
21656 |
T |
 |
| Q |
125 |
caaccctgttaagagaagtagaaaaggatgcatcaatgttgcatttatacctgccagg |
182 |
Q |
| |
|
|| ||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
21657 |
cacccctgttaagattagtggaaaaagatgcatcaatgttgcatttatacctgtcagg |
21714 |
T |
 |
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