View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10378_low_11 (Length: 307)
Name: NF10378_low_11
Description: NF10378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10378_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 7 - 294
Target Start/End: Original strand, 41171110 - 41171398
Alignment:
| Q |
7 |
caaagtatttaatgcacataatttaatattgtctttgacattttttacacaaaaaccaaactatgaaaactttttggatttcatagatctttgaagggtt |
106 |
Q |
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| T |
41171110 |
caaagtatttaatgcacataatttaatattgtctttgacattttttacacaaaaaccaatctatgaaaactttttggatttcatagatctttgaagggtt |
41171209 |
T |
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| Q |
107 |
ggaaccaatttgggataatatagaacgaatttatgtttaaaattatcagatgataatgtagaaactaa-ttagggtgctatgattgatttatttttggcc |
205 |
Q |
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| T |
41171210 |
ggaaccaatttgggataatatagaacgaatttatgtttaaaattatcagatgataatgtagaaactaatttagggtgctatgattgatttatttttggcc |
41171309 |
T |
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| Q |
206 |
tgaggttgggtttgcctaataactataaccattttaattgagggactggtaatatatcgtcaaattcttcagctcttgttttcttttgc |
294 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
41171310 |
tgaggttgggtttgcctaataactataaccattttaattgagggactggtaatatatcgtcaaattcttcagctctttttttcttttgc |
41171398 |
T |
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