View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10379_high_24 (Length: 204)
Name: NF10379_high_24
Description: NF10379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10379_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 45328745 - 45328561
Alignment:
| Q |
5 |
accaccaccacaatcatctgagatacaatccatcaacttcactccacaacaacaattattttctcatcacaaacnnnnnnnnctcagccgctgcaaaaca |
104 |
Q |
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| T |
45328745 |
accaccaccacaatcatctgagatacaatccatcaacttcactccacaacaacaatcattttctcatcacaaacaaaaaaaactcagccgctgcaaaaca |
45328646 |
T |
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| Q |
105 |
gcaccagctatgttcattctcccacaccttaaacccatcaatgaccaacctcaacttcccaaacctcaaaccaattccatcattc |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328645 |
gcaccagctatgttcattctcccacaccttaaacccatcaatgaccaacctcaacttcccaaacctcaaaccaattccatcattc |
45328561 |
T |
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