View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10379_low_10 (Length: 394)

Name: NF10379_low_10
Description: NF10379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10379_low_10
NF10379_low_10
[»] chr4 (8 HSPs)
chr4 (18-390)||(26187521-26187893)
chr4 (201-336)||(13520868-13521005)
chr4 (202-381)||(3992653-3992836)
chr4 (202-337)||(7899838-7899971)
chr4 (202-385)||(39320591-39320768)
chr4 (276-381)||(41817816-41817922)
chr4 (276-349)||(34561471-34561544)
chr4 (203-286)||(31297409-31297493)
[»] chr5 (13 HSPs)
chr5 (202-349)||(562530-562677)
chr5 (202-349)||(557758-557907)
chr5 (202-337)||(12044014-12044152)
chr5 (202-346)||(42002498-42002645)
chr5 (202-349)||(36941147-36941296)
chr5 (202-381)||(21322921-21323104)
chr5 (201-349)||(32460426-32460577)
chr5 (202-334)||(41997719-41997854)
chr5 (239-381)||(13300406-13300553)
chr5 (201-381)||(3666905-3667084)
chr5 (202-284)||(36936393-36936476)
chr5 (202-349)||(31732615-31732760)
chr5 (305-349)||(23976422-23976466)
[»] scaffold0182 (1 HSPs)
scaffold0182 (202-349)||(8764-8914)
[»] chr8 (8 HSPs)
chr8 (202-349)||(31448747-31448897)
chr8 (202-349)||(4237224-4237373)
chr8 (202-349)||(4241963-4242112)
chr8 (276-349)||(8330335-8330408)
chr8 (201-272)||(42973235-42973306)
chr8 (214-349)||(43301638-43301776)
chr8 (276-348)||(25361679-25361750)
chr8 (305-349)||(37772780-37772824)
[»] chr3 (8 HSPs)
chr3 (202-349)||(8888978-8889128)
chr3 (202-349)||(8070741-8070888)
chr3 (202-349)||(3673628-3673777)
chr3 (202-349)||(3693682-3693831)
chr3 (202-349)||(3034706-3034855)
chr3 (202-349)||(8884232-8884382)
chr3 (239-349)||(10585102-10585211)
chr3 (202-234)||(28126365-28126397)
[»] chr2 (6 HSPs)
chr2 (202-349)||(10159601-10159749)
chr2 (202-349)||(6296796-6296942)
chr2 (276-349)||(28856150-28856223)
chr2 (319-381)||(17452512-17452573)
chr2 (202-251)||(35602754-35602804)
chr2 (202-286)||(30659283-30659368)
[»] scaffold0008 (1 HSPs)
scaffold0008 (205-347)||(257703-257844)
[»] chr7 (9 HSPs)
chr7 (201-336)||(9649843-9649980)
chr7 (201-381)||(27257246-27257430)
chr7 (203-286)||(10531748-10531831)
chr7 (202-286)||(13343311-13343395)
chr7 (211-349)||(23866787-23866924)
chr7 (202-349)||(10499011-10499158)
chr7 (202-349)||(10504040-10504187)
chr7 (208-286)||(13346253-13346331)
chr7 (204-318)||(1044346-1044462)
[»] scaffold0628 (1 HSPs)
scaffold0628 (202-319)||(5760-5877)
[»] chr1 (5 HSPs)
chr1 (202-348)||(3095152-3095300)
chr1 (202-263)||(8273059-8273120)
chr1 (276-377)||(33055812-33055918)
chr1 (201-299)||(14204446-14204546)
chr1 (276-348)||(40232345-40232418)
[»] scaffold0041 (1 HSPs)
scaffold0041 (202-381)||(34605-34788)
[»] scaffold0070 (2 HSPs)
scaffold0070 (202-349)||(59472-59617)
scaffold0070 (202-349)||(63674-63819)
[»] scaffold0484 (1 HSPs)
scaffold0484 (276-348)||(7980-8051)
[»] scaffold0060 (1 HSPs)
scaffold0060 (202-381)||(51796-51979)
[»] chr6 (6 HSPs)
chr6 (202-286)||(2862426-2862510)
chr6 (202-248)||(24588522-24588568)
chr6 (202-248)||(28963740-28963786)
chr6 (312-381)||(15645702-15645771)
chr6 (202-286)||(2881729-2881813)
chr6 (202-234)||(2886402-2886434)
[»] scaffold0061 (1 HSPs)
scaffold0061 (256-331)||(48895-48970)
[»] scaffold0017 (1 HSPs)
scaffold0017 (256-331)||(149664-149739)
[»] scaffold0131 (1 HSPs)
scaffold0131 (202-247)||(8718-8763)


Alignment Details
Target: chr4 (Bit Score: 328; Significance: 0; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 18 - 390
Target Start/End: Original strand, 26187521 - 26187893
Alignment:
Q  18 atgatgtacataggacaaccaataacctcctaagtccaatgatcatgaatcacgcttttacaatcttcatgagcagtccacctattttgaaatttgatag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26187521 atgatgtacataggacaaccaataacctcctaagtccaatgatcatgaatcacccttttacaatcttcatgagcagtccacctattttgaaatttgatag 26187620  T
Q  118 atgaggggnnnnnnntgacctcagtaaatttgcatgttcaacatggttggatgatagtcatgaatgagatttaggaagagtggatgttgaaacatgtgtg 217  Q
    ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26187621 atgaggggaaaaaaatgacctcagtaaatttgcatgttcaacatggttggatgatagtcatgaatgagatttaggaagagtggatgttgaaacatgtgtg 26187720  T
Q  218 gaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacaca 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26187721 gaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtcagaattgaaaaatgtgaaattcccacatgagatggatcacaca 26187820  T
Q  318 ctagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaagtaaacacgaaaa 390  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26187821 ctagtagtatttatatagtggggttgtacctcaaatgggatgcataattaagtgaacgaagtaagcacgaaaa 26187893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 336
Target Start/End: Original strand, 13520868 - 13521005
Alignment:
Q  201 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | ||||    
T  13520868 atgttggaacatgtgtggaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagttccac 13520967  T
Q  301 atgagatgga--tcacacactagtggtgtttatatagt 336  Q
    ||  |||| |   |||||| |||| |||||||||||||    
T  13520968 atcggatgaaatacacacattagtagtgtttatatagt 13521005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 202 - 381
Target Start/End: Original strand, 3992653 - 3992836
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||| || ||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  3992653 tgttggaacatatgcggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaggtggaagtcccaca 3992751  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 381  Q
    |  ||||||||||||| |||| |||||||||||||| || |||||||| |||     ||| | |||||||| |||||||||||||    
T  3992752 tcggatggatcacacattagtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 3992836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 337
Target Start/End: Original strand, 7899838 - 7899971
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  7899838 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaagtggaagtcccaca 7899936  T
Q  302 tgagatggatcacacactagtggtgtttatatagtg 337  Q
    | | |||||||||||| |||| ||||||||||||||    
T  7899937 tca-atggatcacacattagtagtgtttatatagtg 7899971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 385
Target Start/End: Complemental strand, 39320768 - 39320591
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||||||||||||||||||||||||| |  | |||||||| || || ||| |||| ||||       ||||||||||| ||| || | | |||    
T  39320768 tgttggaacatgtgtggaaattgagttaaaagattaaatacaaattcgcatgttgggtagaactagt-------gaattgaaaaaagtggaagttctaca 39320676  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaacgaagtaaacac 385  Q
    |  ||| ||||||||| ||||  ||||||||||||| || |||||||| |||  ||   |||||||| |||||||||||||||||    
T  39320675 ttggatagatcacacattagtaatgtttatatagtgggggtgtacctctaatatgggcacataattatgtgaacgaagtaaacac 39320591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 381
Target Start/End: Complemental strand, 41817922 - 41817816
Alignment:
Q  276 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaac 374  Q
    ||||||||||| ||| || | ||||||  ||||||||||| | |||| |||||||||||||| || |||| ||| ||| ||| | |||||||| ||||||    
T  41817922 gaattgaaaaaagtggaagttccacatcggatggatcacatattagtagtgtttatatagtgggggtgtatctctaataggggtacataattatgtgaac 41817823  T
Q  375 gaagtaa 381  Q
    |||||||    
T  41817822 gaagtaa 41817816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 349
Target Start/End: Complemental strand, 34561544 - 34561471
Alignment:
Q  276 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||||||||||| ||| || |||||| |  ||||||||||||| |||| || ||||||||||| || ||||||||    
T  34561544 gaattgaaaaaagtggaagtcccacgtcggatggatcacacattagtagtatttatatagtgggggtgtacctc 34561471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 31297409 - 31297493
Alignment:
Q  203 gttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 286  Q
    |||| |||||| ||||||||||||| |||| | ||  ||||||||||||| || ||| |||| |||||||||  |||||||||||    
T  31297409 gttggaacatgcgtggaaattgagtaaaaaaggctaaacacaaattctcatgttgggtagaactagtgttgtgtgaattgaaaaa 31297493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 562677 - 562530
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  562677 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 562579  T
Q  301 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||| |||| |||||||||||||| || ||||||||    
T  562578 atcggatggaacacacattagtagtgtttatatagtgggggtgtacctc 562530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 557907 - 557758
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| ||||||||||||||||||||| ||||||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  557907 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 557809  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  557808 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 557758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 337
Target Start/End: Original strand, 12044014 - 12044152
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| |||||| |||| |    
T  12044014 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtgaaagtccctc 12044113  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtg 337  Q
    ||  |||||| |||||||  |||| ||||||||||||||    
T  12044114 atcggatggaacacacacattagtagtgtttatatagtg 12044152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 346
Target Start/End: Complemental strand, 42002645 - 42002498
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| ||||||||||||||||||||| ||||||||  ||||||||||  | || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  42002645 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcatatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 42002546  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtac 346  Q
    ||  |||||| |||||||  |||| ||||||||||| ||||| |||||    
T  42002545 atcggatggaacacacacattagtagtgtttatatattgagggtgtac 42002498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 36941147 - 36941296
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| ||||||| |  ||||||||||| ||| || ||||||    
T  36941147 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttctgtgaattgaaaaa-gtggaagtcccac 36941245  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  36941246 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 36941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 381
Target Start/End: Original strand, 21322921 - 21323104
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  21322921 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccaca 21323019  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 381  Q
    |  ||||||||||||| |||| |||||||||||||| || |||||||| |||     ||| | |||||||| |||||||||||||    
T  21323020 tcggatggatcacacattagtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 21323104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 349
Target Start/End: Original strand, 32460426 - 32460577
Alignment:
Q  201 atgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattccca 299  Q
    |||||| ||||||||| ||||||||||| ||||||||   ||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | |||    
T  32460426 atgttggaacatgtgttgaaattgagttaaaaagactaatcacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtacca 32460525  T
Q  300 catgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    |||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  32460526 catcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 32460577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 334
Target Start/End: Complemental strand, 41997854 - 41997719
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||| |||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  41997854 tgttggaacatgtgtgaaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 41997755  T
Q  301 atgagatggatcacacac--tagtggtgtttatata 334  Q
    ||  |||||| |||||||  |||| |||||||||||    
T  41997754 atcggatggaacacacacattagtagtgtttatata 41997719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 381
Target Start/End: Original strand, 13300406 - 13300553
Alignment:
Q  239 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 338  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||| |||||||||||||| |||| ||||||||||||||     
T  13300406 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcagatggatcacacattagtagtgtttatatagtgg 13300505  T
Q  339 ggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 381  Q
    || |||||||| |||     ||| | |||||||| |||||||||||||    
T  13300506 gggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 13300553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 381
Target Start/End: Complemental strand, 3667084 - 3666905
Alignment:
Q  201 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    |||||| |||||||||||||||||||| ||||||||  ||||||||| ||| || | | |||| |||||||||   |||||||||| ||| || ||||||    
T  3667084 atgttggaacatgtgtggaaattgagtaaaaagactaaacacaaattttcatgttgtgtagaaatagtgttgtgtaaattgaaaaaggtggaagtcccac 3666985  T
Q  301 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaacgaagtaa 381  Q
    ||  |||||| ||  || |||| |||||  ||||||| || |||||||| ||| ||| | |||||||| |||||||| ||||    
T  3666984 atcggatggaacaagcattagtagtgtt--tatagtgggggtgtacctctaataggggtacataattatgtgaacgatgtaa 3666905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 36936393 - 36936476
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaa 284  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  |||||||||    
T  36936393 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaa 36936476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 31732760 - 31732615
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||  |||| |||||| ||  |||||||||||  || || |||||||    
T  31732760 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatggatagaactagtgtagtgtgaattgaaaaaaatggaagtcccaca 31732662  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    |  ||||||||||||| |||| |||||||||||||| || ||||||||    
T  31732661 tc-gatggatcacacattagtagtgtttatatagtgggggtgtacctc 31732615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 23976422 - 23976466
Alignment:
Q  305 gatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||||||||||||| ||||  |||||||||||||||| ||||||||    
T  23976422 gatggatcacacattagtaatgtttatatagtgagggtgtacctc 23976466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 8764 - 8914
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  8764 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaaatcccac 8863  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  8864 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 8914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 31448747 - 31448897
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  31448747 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 31448846  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  31448847 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 31448897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 4237224 - 4237373
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  4237224 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 4237322  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  4237323 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 4237373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 4241963 - 4242112
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  4241963 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 4242061  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  4242062 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 4242112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 349
Target Start/End: Original strand, 8330335 - 8330408
Alignment:
Q  276 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||||||||||| |||||| ||||||||  ||||||||||||| |||| |||||||||||||  || ||||||||    
T  8330335 gaattgaaaaaagtgaaagtcccacatcggatggatcacacattagtagtgtttatatagtaggggtgtacctc 8330408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 42973306 - 42973235
Alignment:
Q  201 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttg 272  Q
    |||||| ||||||||   |||||||||||||||||| ||||||||||| |||||  | ||||||||||||||    
T  42973306 atgttggaacatgtgcaaaaattgagttaaaagactatacacaaattcccacgttagaaagaattagtgttg 42973235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 349
Target Start/End: Original strand, 43301638 - 43301776
Alignment:
Q  214 tgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatc 312  Q
    ||||||||||||||| ||||||||  |||||||||  ||  | ||| |||| |||||||||  ||||||||||| ||| || ||| ||||  |||||| |    
T  43301638 tgtggaaattgagttaaaaagactaaacacaaatttccatcttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcctacatcggatggaac 43301737  T
Q  313 ac--acactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  ||| |||| |||||||||||||| || ||||||||    
T  43301738 acatacattagtagtgtttatatagtgggggtgtacctc 43301776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 25361679 - 25361750
Alignment:
Q  276 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacct 348  Q
    ||||||||||| ||| || ||||||||  ||||||||||||| |||| || ||||||||||| || |||||||    
T  25361679 gaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtagtatttatatagtggggatgtacct 25361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 37772824 - 37772780
Alignment:
Q  305 gatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||||||||||||| |||| |||||||||||||| || ||||||||    
T  37772824 gatggatcacacattagtagtgtttatatagtgggggtgtacctc 37772780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 8889128 - 8888978
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||||||| |||||||||| ||||  |||||||||| || || ||| ||||||||||||||  ||||||||||| ||| || ||||||    
T  8889128 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattcccatgttgggtagaattagtgttgtgtgaattgaaaaaagtggaagtcccac 8889029  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  8889028 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 8888978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 8070888 - 8070741
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  |||||||||||  || || ||||||    
T  8070888 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaa-tggaagtcccac 8070790  T
Q  301 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||| |||| |||||||||||||| || ||||||||    
T  8070789 atcggatggaacacacattagtagtgtttatatagtgggggtgtacctc 8070741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 3673777 - 3673628
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  3673777 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 3673679  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  3673678 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 3673628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 3693831 - 3693682
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||||||||||||||||| |||||  ||||||||||||| || ||| |||| || ||||||  ||||||||||| ||| || ||||||    
T  3693831 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattctcatgttgggtagaactaatgttgtgtgaattgaaaaa-gtggaagtcccac 3693733  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  3693732 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 3693682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 3034855 - 3034706
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  3034855 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 3034757  T
Q  301 atgagatgga--tcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  ||||||   |||||| |||| |||||||||||||| || ||||||||    
T  3034756 atcggatggaatacacacattagtagtgtttatatagtgggggtgtacctc 3034706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 8884382 - 8884232
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||||||| |||||||||| ||||  |||||||||| || || ||| |||| |||||||||  |||||||||||  || || ||||||    
T  8884382 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaaatggaagtcccac 8884283  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  8884282 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 8884232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 349
Target Start/End: Original strand, 10585102 - 10585211
Alignment:
Q  239 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 338  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||||||||     
T  10585102 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtagtgtttatatagtgg 10585200  T
Q  339 ggttgtacctc 349  Q
    || ||||||||    
T  10585201 gggtgtacctc 10585211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 28126397 - 28126365
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaaga 234  Q
    |||||||||||||||| ||||||||||||||||    
T  28126397 tgttgaaacatgtgtgaaaattgagttaaaaga 28126365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 10159601 - 10159749
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| ||||| ||||||||||||||||||| ||||  |||||||||| || ||  || |||| |||||||||  ||||||||||| ||| || ||||||    
T  10159601 tgttggaacatctgtggaaattgagttaaaaagactaaacacaaattcccatgttaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 10159700  T
Q  301 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||  |||||| |||| | |||| |||||||||||||| || ||||||||    
T  10159701 atcggatggaacacatattagtagtgtttatatagtgggggtgtacctc 10159749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 6296796 - 6296942
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| ||  ||||||    
T  6296796 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagacccaca 6296894  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    |  ||||||||||||| |||| |||||||||||||| || ||||||||    
T  6296895 tcggatggatcacacattagtagtgtttatatagtgggggtgtacctc 6296942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 349
Target Start/End: Complemental strand, 28856223 - 28856150
Alignment:
Q  276 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    ||||||||||| ||| || |||||||| |||||||||||||| |||| |||||||||| ||| || ||||||||    
T  28856223 gaattgaaaaaagtggaagtcccacatcagatggatcacacattagtagtgtttatatggtggggatgtacctc 28856150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 17452512 - 17452573
Alignment:
Q  319 tagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaagtaa 381  Q
    |||| |||||||||||||| ||||||||||  || ||||| |||||||| |||||||||||||    
T  17452512 tagtagtgtttatatagtg-ggttgtacctttaaagggatacataattatgtgaacgaagtaa 17452573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 35602804 - 35602754
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctca 251  Q
    ||||| ||||||||||||||||||||| ||||||||  |||||||||||||    
T  35602804 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattctca 35602754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 30659368 - 30659283
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 286  Q
    ||||| ||||||||||||||||||||| ||||||||  ||| ||| || || || ||| |||| |||||||||  |||||||||||    
T  30659368 tgttggaacatgtgtggaaattgagttaaaaagactaaacaaaaactcccatgttgggtagaactagtgttgtgtgaattgaaaaa 30659283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 347
Target Start/End: Complemental strand, 257844 - 257703
Alignment:
Q  205 tgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatga 304  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||| | || | | |||| || ||||||  ||||||||||| |||||| || |||| ||    
T  257844 tgaaatatgtgtggaaattgagttaaaagactaaacacaaattcttatgttgagtagaactaatgttgtgtgaattgaaaaaagtgaaagtctcacacga 257745  T
Q  305 gatggatcacacactagtggtgtttatatagtgaggttgtacc 347  Q
     ||| | |||||| ||||  ||||||||||||| |||||||||    
T  257744 -atgaaacacacattagtattgtttatatagtggggttgtacc 257703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 336
Target Start/End: Original strand, 9649843 - 9649980
Alignment:
Q  201 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | ||||    
T  9649843 atgttggaacatgtgtggaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagttccac 9649942  T
Q  301 atgagatgga--tcacacactagtggtgtttatatagt 336  Q
    ||  |||| |   |||||| |||| |||||||||||||    
T  9649943 atcggatgaaatacacacattagtagtgtttatatagt 9649980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 381
Target Start/End: Complemental strand, 27257430 - 27257246
Alignment:
Q  201 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    |||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||    
T  27257430 atgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 27257332  T
Q  301 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 381  Q
    || |||||||||||||| |||| |||||||||||||| || |||| ||| |||     ||| | |||||||| |||||||||||||    
T  27257331 atcagatggatcacacattagtagtgtttatatagtgggggtgtatctctaattaatgggggtacataattatgtgaacgaagtaa 27257246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 10531748 - 10531831
Alignment:
Q  203 gttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 286  Q
    |||||||| |||||| ||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||| ||||||||||||    
T  10531748 gttgaaacttgtgtgaaaattgaattaaaagactaaacacaaattttcacgtagggtagaactagttttgtgcgaattgaaaaa 10531831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 13343311 - 13343395
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 286  Q
    ||||| |||||||||||||||||| |||||||||   ||||||||| |||||| ||| |||| |||||||||  |||||||||||    
T  13343311 tgttggaacatgtgtggaaattgaattaaaagacaaaacacaaattttcacgttgggtagaactagtgttgtgtgaattgaaaaa 13343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 211 - 349
Target Start/End: Complemental strand, 23866924 - 23866787
Alignment:
Q  211 atgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattga-aaaatgtgaaattcccacatgagatgg 309  Q
    ||||||| ||||||||||||||||||  |||||||||| || || ||| |||| |||||||||  ||||||| |||| ||| || ||||||||  |||||    
T  23866924 atgtgtgaaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaaagtggaagtcccacattggatgg 23866825  T
Q  310 atcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    |  ||||| |||| ||||||||||| || || ||||||||    
T  23866824 a--acacattagtagtgtttatataatgggggtgtacctc 23866787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 10499011 - 10499158
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| |||||||||||||||||| ||||||||||  ||| |||||   ||||| || |||| |||||||||  ||||||||||| ||| || ||||  |    
T  10499011 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatttcaacgtaaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccgaa 10499110  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    |  |||||| |||||| ||||  |||||||||| | ||| ||||||||    
T  10499111 ttggatggaacacacattagtattgtttatataattagggtgtacctc 10499158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 10504040 - 10504187
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| |||||||||||||||||| ||||||||||  ||| |||||   ||||| || |||| |||||||||  ||||||||||| ||| || ||||  |    
T  10504040 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatttcaacgtaaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccgaa 10504139  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    |  |||||| |||||| ||||  |||||||||| | ||| ||||||||    
T  10504140 ttggatggaacacacattagtattgtttatataattagggtgtacctc 10504187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 13346253 - 13346331
Alignment:
Q  208 aacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 286  Q
    |||||||||||||||||| |||||||||   ||| ||||| ||||||  || |||| |||||||||  |||||||||||    
T  13346253 aacatgtgtggaaattgaattaaaagacaaaacataaattttcacgtttggtagaactagtgttgtgtgaattgaaaaa 13346331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 1044462 - 1044346
Alignment:
Q  204 ttgaaacatgtgtggaaatt--gagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||||||||||||||||||  |||||||||||||  ||||||  |||||| | |   |||| |||||| ||  ||||||||||| |||||| ||| |||    
T  1044462 ttgaaacatgtgtggaaattgagagttaaaagactaaacacaatgtctcacattgtctagaactagtgtggtgtgaattgaaaaaagtgaaagtcctaca 1044363  T
Q  302 tgagatggatcacacac 318  Q
    |  ||| ||||||||||    
T  1044362 ttggatagatcacacac 1044346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 5877 - 5760
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||||||||||||||||||||||| |||  |||||||||||||  |  || |||| |||||||||  |||||||||||  ||||| |||||||    
T  5877 tgttggaacatgtgtggaaattgagttaaaatactaaacacaaattctcatatttggtagaactagtgttgtgtgaattgaaaaaaatgaaagtcccaca 5778  T
Q  302 tgagatggatcacacact 319  Q
    | | ||||| ||||||||    
T  5777 tcaaatggaacacacact 5760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 348
Target Start/End: Complemental strand, 3095300 - 3095152
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 300  Q
    ||||| |||||||||||||||||||||||| | |||  |||||||||  || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  3095300 tgttggaacatgtgtggaaattgagttaaacaaactaaacacaaatttccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 3095202  T
Q  301 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacct 348  Q
    ||  |||| | |||||||  |||| |||||||||||||| || |||||||    
T  3095201 atcggatgaaacacacacattagtagtgtttatatagtgggggtgtacct 3095152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 8273059 - 8273120
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaa 263  Q
    ||||||||||||||||||||||||||||||| | |  |||||||||| ||||| ||| ||||    
T  8273059 tgttgaaacatgtgtggaaattgagttaaaaaaataaacacaaattcccacgttgggtagaa 8273120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 33055918 - 33055812
Alignment:
Q  276 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagt 370  Q
    |||||||||||  || || ||||||||  ||||||||||||| |||| ||||||||||||||  | |||||||  |||     ||||| |||||||||||    
T  33055918 gaattgaaaaaaatggaagtcccacatcggatggatcacacattagtagtgtttatatagtggaggtgtacctgtaattaatggggatacataattaagt 33055819  T
Q  371 gaacgaa 377  Q
    |||||||    
T  33055818 gaacgaa 33055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 14204446 - 14204546
Alignment:
Q  201 atgttgaaacatgtgtggaaattgagttaaaagacttt--acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattccc 298  Q
    |||||| |||||||||||||||||||| ||||| || |  ||||||||||| | || |||  ||| |||||||||  ||||||||||| ||| || ||||    
T  14204446 atgttggaacatgtgtggaaattgagtaaaaagtctataaacacaaattcttatgttgggtggaactagtgttgtgtgaattgaaaaaagtggaagtccc 14204545  T
Q  299 a 299  Q
    |    
T  14204546 a 14204546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 40232345 - 40232418
Alignment:
Q  276 gaattgaaaaatgtgaaattcccacatgagatggatcacaca-ctagtggtgtttatatagtgaggttgtacct 348  Q
    ||||||||||| ||| || ||||||||  |||||||||||||  |||| |||||||||||||| || |||||||    
T  40232345 gaattgaaaaaagtggaagtcccacatcggatggatcacacatttagtagtgtttatatagtgggggtgtacct 40232418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 381
Target Start/End: Original strand, 34605 - 34788
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  34605 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccaca 34703  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 381  Q
    |   |||||||||||| || | |||||||||||||| || |||||||| |||     ||| | |||||||| |||||||||||||    
T  34704 tcgtatggatcacacattaatagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 34788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 59617 - 59472
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  59617 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaaatcccaca 59520  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    |  ||||||||||||| ||||  ||||||||||||| || ||||||||    
T  59519 tcggatggatcacacattagtaatgtttatatagtgggggtgtacctc 59472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 63819 - 63674
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  63819 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaaatcccaca 63722  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 349  Q
    |  ||||||||||||| ||||  ||||||||||||| || ||||||||    
T  63721 tcggatggatcacacattagtaatgtttatatagtgggggtgtacctc 63674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 8051 - 7980
Alignment:
Q  276 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacct 348  Q
    ||||||||||| ||| || ||||||||  ||||||||||||| ||||||| ||||||||||| || |||||||    
T  8051 gaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtggtatttatatagtggggatgtacct 7980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 381
Target Start/End: Original strand, 51796 - 51979
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 301  Q
    ||||| ||||| |||| ||||||||| ||  ||||  |||||||||| |||   ||| ||||||||||| ||  ||||||||||| ||| || || |||     
T  51796 tgttggaacatatgtgaaaattgagt-aattgactaaacacaaattcccacaatgggtagaattagtgtagtgtgaattgaaaaaagtggaagtcacacg 51894  T
Q  302 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 381  Q
    |  ||||||||||||| |||| |||||||||||||  || |||||||| |||     ||| | |||||||| |||||||||||||    
T  51895 tcggatggatcacacattagtagtgtttatatagtaggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 51979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 2862426 - 2862510
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 286  Q
    ||||| |||||||||  |||||||||||||| |||  |||||||||||||| |  || ||||||||||||||  ||||| |||||    
T  2862426 tgttggaacatgtgtaaaaattgagttaaaaaactagacacaaattctcacatttggtagaattagtgttgtgtgaattaaaaaa 2862510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 24588522 - 24588568
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattc 248  Q
    ||||| |||||||||||||||||||| ||||||||  ||||||||||    
T  24588522 tgttggaacatgtgtggaaattgagtaaaaagactaaacacaaattc 24588568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 28963740 - 28963786
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattc 248  Q
    ||||| ||||||||||||||||||||||||||||   ||||||||||    
T  28963740 tgttggaacatgtgtggaaattgagttaaaagaccaaacacaaattc 28963786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 381
Target Start/End: Complemental strand, 15645771 - 15645702
Alignment:
Q  312 cacacactagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaagtaa 381  Q
    |||||| ||||||| |||||||||||||| || ||||| ||  || | |||||||| |||||||||||||    
T  15645771 cacacattagtggtatttatatagtgagggtgcacctctaagcggctacataattatgtgaacgaagtaa 15645702  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 2881729 - 2881813
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 286  Q
    ||||| |||||||||  |||||||||||||| |||  |||||||||||||| |  || |||| |||||||||  ||||| |||||    
T  2881729 tgttggaacatgtgtaaaaattgagttaaaaaactagacacaaattctcacatttggtagaactagtgttgtgtgaattaaaaaa 2881813  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 2886402 - 2886434
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaaga 234  Q
    |||||||||||||||| ||||||||||||||||    
T  2886402 tgttgaaacatgtgtgaaaattgagttaaaaga 2886434  T

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Target: scaffold0061 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 48895 - 48970
Alignment:
Q  256 gggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttat 331  Q
    |||||||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||    
T  48895 gggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacattagtagtgtttat 48970  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 149739 - 149664
Alignment:
Q  256 gggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttat 331  Q
    |||||||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||    
T  149739 gggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacattagtagtgtttat 149664  T

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Target: scaffold0131 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 8763 - 8718
Alignment:
Q  202 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaatt 247  Q
    |||||||||||||||||||||||| |||||| |||  |||||||||    
T  8763 tgttgaaacatgtgtggaaattgaattaaaatactaaacacaaatt 8718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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