View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10380_low_14 (Length: 282)
Name: NF10380_low_14
Description: NF10380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10380_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 13234942 - 13234711
Alignment:
| Q |
16 |
caaaacgaagaataatgtaaaataaaatcctatatagaacagcccaacctaacattataagcacattgttccttttcttaatctcgtcagtaccaatatg |
115 |
Q |
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| T |
13234942 |
caaaacgaagaataatgtaaaataaaatcctatatagaacagcccaacctaacattataagcacattgttccttttcttaatctcttcagtaccaatatg |
13234843 |
T |
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| Q |
116 |
aagacttttcaaaatatcaaaaccagtaatagatacaccatcatttgatccaaaagtttcattagtctgatactcattcatcaagagtccttcataaggg |
215 |
Q |
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| T |
13234842 |
aagacttttcaaaatatcaaaaccagtaatagatacaccatcatttgatccaaaagtttcattagtctgatactcattcatcaagagtccttcataaggg |
13234743 |
T |
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| Q |
216 |
tatgtcattgtcgaaaccttgttcatccaacg |
247 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
13234742 |
tatgtcattgtcgaaaccttgttcatccaacg |
13234711 |
T |
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