View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10380_low_15 (Length: 280)
Name: NF10380_low_15
Description: NF10380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10380_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 263
Target Start/End: Complemental strand, 11587293 - 11587052
Alignment:
| Q |
18 |
agatcattatcaataatttgtttttgacgaaagtgtatattccattttttgaattgtggtttcaccactttttgtctaggataaataccaataattatat |
117 |
Q |
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| T |
11587293 |
agatcattatcaataatttgtttttgacgaaagtgtacattccattttttgaattgtggtttcaccactttttgtctaggataaataccaataattatat |
11587194 |
T |
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| Q |
118 |
ggttggtatttaattgcaatttaataatacaatcatgttcctagatgtaattaactcttaatttaagaaagtggtcagtgttaatgatttatatataatc |
217 |
Q |
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| T |
11587193 |
gattggtatttaattgcaatttaataatacaatcatgttcctagatg----taactcttaatttaagaaagttgtcaatgttaatgatttacatataata |
11587098 |
T |
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| Q |
218 |
ccctcaaatgtgtgtttgagtccttttaagatcacccataatgtgt |
263 |
Q |
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| T |
11587097 |
ccctcaaatgtgtgtttgagtccctttaagatcacccataatgtgt |
11587052 |
T |
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