View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10380_low_17 (Length: 252)
Name: NF10380_low_17
Description: NF10380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10380_low_17 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 13867872 - 13868120
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
13867872 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggtatcattgttggcgagg |
13867971 |
T |
 |
| Q |
101 |
cagcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
13867972 |
cagcattgtgtgttactgggtgtggcatggcagagtctgtttctcatttatttctacattgtgctacttttggtactttatggcattttgtcaggtgttg |
13868071 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
13868072 |
gattggaatgtcaggtgctgatccccttaatattgatgaccatttcatt |
13868120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 33150937 - 33150830
Alignment:
| Q |
142 |
tctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttggattggaatgtcaggtgctgatccccttaatattgatgtcc |
241 |
Q |
| |
|
|||||||||||||| || || || |||||||| | ||||||||| || |||||| |||||| |||||||||||||| || |||||||||||||||| || |
|
|
| T |
33150937 |
tctcatttatttattcactgcgccacttttggctcattgtggcatcttatcaggtcttggatcggaatgtcaggtgccgacccccttaatattgatgacc |
33150838 |
T |
 |
| Q |
242 |
atctcatt |
249 |
Q |
| |
|
|| ||||| |
|
|
| T |
33150837 |
atttcatt |
33150830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 249
Target Start/End: Original strand, 26510417 - 26510662
Alignment:
| Q |
4 |
gtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgaggcag |
103 |
Q |
| |
|
|||||||| ||||| ||||| |||||||| | ||||| ||||| |||||||||||||||||| | ||| | | ||||| | |||| | ||| |||| |
|
|
| T |
26510417 |
gtgccgctgaaggtctccatctttgcttgacggttgttgcgggacaggttgccgactaagaataatcttatgagacgtggagtaatcaataccgaagcag |
26510516 |
T |
 |
| Q |
104 |
cattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttggat |
203 |
Q |
| |
|
|||||||||| || || |||| || ||||||| |||| || ||||| |||||||| | ||| ||||| ||||||||| | |||||| |||||| |
|
|
| T |
26510517 |
ttatgtgtgttacaggatgcggcaaggaagagtctgcgcctcacttgtttattcattgtgccattttcggtacattgtggcatcatatcaggtcttggat |
26510616 |
T |
 |
| Q |
204 |
tggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
||||||||||||| ||| ||| ||||||| |||| |||| ||||| |
|
|
| T |
26510617 |
cggaatgtcaggtgttgacccctttaatatcgatgaccatttcatt |
26510662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45795307 - 45795267
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgtt |
41 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
45795307 |
caggtgccgcttaaggtttccatttttgcttggggattgtt |
45795267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 5808801 - 5808740
Alignment:
| Q |
5 |
tgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaat |
66 |
Q |
| |
|
||||||| |||||||| || ||||||||| | ||||| || || |||||||||||||||||| |
|
|
| T |
5808801 |
tgccgctaaaggtttctatctttgcttggcggttgttgcgagacaggttgccgactaagaat |
5808740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 35213713 - 35213468
Alignment:
| Q |
4 |
gtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgaggcag |
103 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
35213713 |
gtgccgcttaaggtttccatttttgcttgaagattgttacgggataggttgccgactaagaatcaccttctccggcatggcatcattgttggcgaggcag |
35213614 |
T |
 |
| Q |
104 |
cattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttggat |
203 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
35213613 |
cattgtgtgttactgggtgcggcatggcagagtctgtttcccatttatttatacattgtgctactttcgttactttgtggcattttgtcaggtgttggat |
35213514 |
T |
 |
| Q |
204 |
tggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||| ||||| |
|
|
| T |
35213513 |
tggaatgtcaggtgttgatccccttaatattgatgaccatttcatt |
35213468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 26855796 - 26855548
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgagg |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||| || || ||||||||||||||||||||||| ||| | |||||||||| |||| |||||| |
|
|
| T |
26855796 |
caggtgccgctcaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctttttaggcgtggcataatcaacagcgagg |
26855697 |
T |
 |
| Q |
101 |
cagcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
| ||||||| || ||||| || |||| ||| || |||||| | ||||| ||||| | ||||||||| ||||||||||| || |||||| || |
|
|
| T |
26855696 |
cttgtatgtgtgtcacagggtgcggtatggaagagactacatctcatctttttattcattgcaccacttttggttctttgtggcatcttatcaggtcttt |
26855597 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
||| ||||||||||||||||| || |||||||| ||| |||| ||||| |
|
|
| T |
26855596 |
gatcggaatgtcaggtgctgacccttttaatattaatgaccatttcatt |
26855548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 43516787 - 43517035
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||| |
|
|
| T |
43516787 |
caggtgccgcttaaggtttccatttttgcttggagattgttatgggataggttgccgactaagaatcatctcctccggcgtggcatcatcgttggcgagg |
43516886 |
T |
 |
| Q |
101 |
cagcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
43516887 |
tagcattgtgtgttactgggtgcggcatgacatagtctgtttctcatttatttatacattgtgctactttcggtactttgtggcattttatcaggtgttg |
43516986 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
43516987 |
gattggaatgtcaggtgctgatccccttaatattgatgaccatttcatt |
43517035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 20544168 - 20543920
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgagg |
100 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||| |||| || || |||||||||||||||||||| || ||||| |||||||||| |||| |||||| |
|
|
| T |
20544168 |
caggtgccgctgaaggtttccatttttacttggcgattattgcgagataggttgccgactaagaaccatcttctaaggcgtggcataatcaacggcgaga |
20544069 |
T |
 |
| Q |
101 |
cagcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
|| ||||||| || ||||| || |||| ||| || |||||||||||||| || || || ||||||||| | ||||||||| || |||||| ||| |
|
|
| T |
20544068 |
caagtatgtgtgtcacagggtgcggtatggaagagactacatctcatttatttattcactgcgccacttttggttcattgtggcatcttatcaggtcttg |
20543969 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
||| ||||||||||||||||| ||| |||||||||||| |||| ||||| |
|
|
| T |
20543968 |
gatcggaatgtcaggtgctgacccctttaatattgatgaccatttcatt |
20543920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 38295820 - 38295784
Alignment:
| Q |
11 |
ttaaggtttccatttttgcttggagattgttacggga |
47 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
38295820 |
ttaaagtttccatttttgcttggaggttgttacggga |
38295784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 40513763 - 40514000
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| | || |||| |
|
|
| T |
40513763 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttcttcggcgtggtatcatcgtcggtgagg |
40513862 |
T |
 |
| Q |
101 |
cagcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
|||||||||||||| | |||||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
40513863 |
cagcattgtgtgtttccgggtgtggcatggcagagtctgtctctcatttatttctacattgtcctacttttggtactttatggcattttgtcaggtgttg |
40513962 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctgatccccttaatattgatg |
238 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
40513963 |
gattggaatgtcatgtgctgatccccttaatattgatg |
40514000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 34829502 - 34829254
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgagg |
100 |
Q |
| |
|
||||||| ||| ||||| ||||| ||||||||| | ||||| ||||| |||||| ||| ||||||| | ||||| | ||||| | |||| || ||| | |
|
|
| T |
34829502 |
caggtgctgctgaaggtctccatctttgcttggcggttgttgcgggacaggttgtcgattaagaataatcttctaagacgtggagtaatcaatgccgaag |
34829403 |
T |
 |
| Q |
101 |
cagcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
|| |||||||||| ||||| |||| || ||||||| |||| || ||||| |||||||| ||||| |||| ||||||||| | |||||| ||| |
|
|
| T |
34829402 |
tagttatgtgtgttacagggtgcggcaaggaagagtctgcgcctcacttgtttattcattgtgccactttcagtacattgtggcatcatatcaggtcttg |
34829303 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
||| ||||||||||||| | | ||| |||||||||||| |||| ||||| |
|
|
| T |
34829302 |
gatcggaatgtcaggtgttaacccctttaatattgatgaccatttcatt |
34829254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 11196434 - 11196186
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgagg |
100 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||| |||||||||| |||| |||||||| |
|
|
| T |
11196434 |
caggtgccgctgaaggtttccatttttacttggcgattgttgcgagataggttgccgactaagaaccatcttctaaggcgtggcataatcaatggcgagg |
11196335 |
T |
 |
| Q |
101 |
cagcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
||| |||||||||| ||||| || ||||| ||| || |||||||||||||| || || || ||||||||| | ||||||||| || |||||| ||| |
|
|
| T |
11196334 |
cagttatgtgtgttacagggtgcggtatggcagagattgcgtctcatttatttattcactgcgccacttttggttcattgtggcatcttatcaggtcttg |
11196235 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
||| |||||||||||| || | |||||||||||||| |||| ||||| |
|
|
| T |
11196234 |
gatcagaatgtcaggtgtcgacctccttaatattgatgaccatttcatt |
11196186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 32624437 - 32624217
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgagg |
100 |
Q |
| |
|
||||||||||| |||||||||||||||| |||| |||| || | |||||||||||||||||||| || ||||| |||||||||| |||| ||||||| |
|
|
| T |
32624437 |
caggtgccgctgaaggtttccatttttgtttggcgattattgagagataggttgccgactaagaaccatcttctaaggcgtggcataatcaacggcgagg |
32624338 |
T |
 |
| Q |
101 |
cagcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
|| ||||||| || || || || |||| ||| || |||||||||||||| ||||| || ||||||||| | ||||||||| || |||||| ||| |
|
|
| T |
32624337 |
catgtatgtgtgtcacaggatgcggtatggaagagactacatctcatttatttattcattgcgccacttttggttcattgtggcatcttatcaggtcttg |
32624238 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctga |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
32624237 |
gattggaatgtcaggtgctga |
32624217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 144246 - 144301
Alignment:
| Q |
166 |
acttttggtactttgtggcattttgtcaggtgttggattggaatgtcaggtgctga |
221 |
Q |
| |
|
||||||||| ||||||||||| || |||||| |||||| ||||||||||||||||| |
|
|
| T |
144246 |
acttttggttctttgtggcatcttatcaggtcttggatcggaatgtcaggtgctga |
144301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 21367976 - 21368223
Alignment:
| Q |
2 |
aggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgaggc |
101 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||| |||| || | |||||||||||||||||||| || || || |||||||||| |||| |||||||| |
|
|
| T |
21367976 |
aggtgccgctgaaggtttccattttttcttggcgattattgagagataggttgccgactaagaaccatctcctaaggcgtggcataatcaacggcgaggc |
21368075 |
T |
 |
| Q |
102 |
a-gcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
| | | | ||||| || ||||| || |||| ||| || ||| || | ||||| ||||| || ||||||||| | ||||||||| || |||||| ||| |
|
|
| T |
21368076 |
atgtaat-tgtgtcacagggtgcggtatggaagagactacatcttatctttttattcattgcgccacttttggttcattgtggcatcttatcaggtcttg |
21368174 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
||| ||||||||||||||||| || ||||||||||||| |||| ||||| |
|
|
| T |
21368175 |
gatcggaatgtcaggtgctgaccctcttaatattgatgaccatttcatt |
21368223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 979350 - 979392
Alignment:
| Q |
207 |
aatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||| ||||| |
|
|
| T |
979350 |
aatgtcaggtggtgatccccttaatattgatgaccatttcatt |
979392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14687065 - 14687285
Alignment:
| Q |
1 |
caggtgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatcaccttctccggcgtggcatcatcattggcgagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| || || ||||||||||||||||||||||| ||| | |||||||||| |||| | |||| |
|
|
| T |
14687065 |
caggtgccgcttaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctttttaggcgtggcataatcaacagtgagg |
14687164 |
T |
 |
| Q |
101 |
cagcattgtgtgttactgggtgtggcatggctgagtctgtttctcatttatttatacattgtgctacttttggtactttgtggcattttgtcaggtgttg |
200 |
Q |
| |
|
||||||| || ||||| || ||| ||| || |||||| | ||||| ||||| | ||||||||| ||||||||||| || |||||| ||| |
|
|
| T |
14687165 |
tttgtatgtgtgtcacagggtgcggtgtggaagagactacatctcatctttttattcattgcaccacttttggttctttgtggcatcttatcaggtcttg |
14687264 |
T |
 |
| Q |
201 |
gattggaatgtcaggtgctga |
221 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
14687265 |
gatcggaatgtcaggtgctga |
14687285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 26513795 - 26513744
Alignment:
| Q |
13 |
aaggtttccatttttgcttggagattgttacgggataggttgccgactaaga |
64 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||| |||| |
|
|
| T |
26513795 |
aaggtttccatttttgcttggcagttgttgcgggataggttgccgaccaaga |
26513744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 25900925 - 25900869
Alignment:
| Q |
193 |
aggtgttggattggaatgtcaggtgctgatccccttaatattgatgtccatctcatt |
249 |
Q |
| |
|
|||| |||||| ||||||||||||| ||| ||| |||||||||||| |||| ||||| |
|
|
| T |
25900925 |
aggtcttggatcggaatgtcaggtgttgacccctttaatattgatgaccatttcatt |
25900869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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