View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10380_low_24 (Length: 243)
Name: NF10380_low_24
Description: NF10380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10380_low_24 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 243
Target Start/End: Complemental strand, 37840820 - 37840596
Alignment:
| Q |
19 |
tgaggtgcttactttgaaactaagctatcttgaaggaatgacaaggaaattggatggtaaactcttagaatttctgtgaaacttctgataaaggaaatta |
118 |
Q |
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| T |
37840820 |
tgaggtgcttactttgaaactaagctatcttgaaggaatgacaaggaaattggatggtaaactcttagaatttctgtgaaacttctgataaaggaaatta |
37840721 |
T |
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| Q |
119 |
caaggaaagagaccacaaagttatagggtgtatgaatgagcatattttgttctgagtcaaccatgcaatcaactatgggagaaaaagtaaattaattaat |
218 |
Q |
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| T |
37840720 |
caaggaaagagaccacaaagttatagggtttatgaatgacaatattttgttctgagtcaaccaagcaatcaactatgggagaaaaagtaaattaattaat |
37840621 |
T |
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| Q |
219 |
atgccaagttgccaacgtgtaggtt |
243 |
Q |
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| T |
37840620 |
atgccaagttgccaacgtgtaggtt |
37840596 |
T |
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