View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10380_low_33 (Length: 223)

Name: NF10380_low_33
Description: NF10380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10380_low_33
NF10380_low_33
[»] chr8 (35 HSPs)
chr8 (1-223)||(28737689-28737911)
chr8 (1-105)||(37372539-37372643)
chr8 (1-136)||(3892220-3892355)
chr8 (5-136)||(27108904-27109035)
chr8 (1-128)||(20182653-20182780)
chr8 (1-128)||(27968378-27968505)
chr8 (1-128)||(27886463-27886590)
chr8 (1-128)||(27945121-27945248)
chr8 (1-128)||(28025364-28025491)
chr8 (1-136)||(7411880-7412015)
chr8 (1-101)||(8170811-8170911)
chr8 (1-96)||(40412861-40412956)
chr8 (1-136)||(5818058-5818193)
chr8 (3-137)||(41098674-41098808)
chr8 (1-77)||(43770885-43770961)
chr8 (1-90)||(32638395-32638484)
chr8 (1-90)||(45216401-45216490)
chr8 (1-136)||(32858-32996)
chr8 (1-77)||(32877918-32877994)
chr8 (1-75)||(28875746-28875820)
chr8 (1-73)||(19436717-19436789)
chr8 (1-73)||(19572866-19572938)
chr8 (1-77)||(25022615-25022691)
chr8 (1-76)||(6028954-6029029)
chr8 (1-75)||(5540285-5540359)
chr8 (1-75)||(42949532-42949606)
chr8 (1-77)||(19947556-19947632)
chr8 (10-77)||(4246790-4246857)
chr8 (15-104)||(32425226-32425316)
chr8 (1-53)||(12579710-12579762)
chr8 (1-76)||(32760217-32760291)
chr8 (1-76)||(37669431-37669505)
chr8 (1-62)||(36484299-36484360)
chr8 (28-68)||(38389011-38389051)
chr8 (10-69)||(34900556-34900615)
[»] chr1 (38 HSPs)
chr1 (1-136)||(10822650-10822785)
chr1 (1-135)||(14167326-14167460)
chr1 (1-136)||(9528571-9528706)
chr1 (1-136)||(24851748-24851883)
chr1 (1-113)||(32797470-32797582)
chr1 (1-136)||(34432142-34432277)
chr1 (1-127)||(32380785-32380911)
chr1 (1-109)||(29168230-29168338)
chr1 (1-128)||(37922478-37922605)
chr1 (1-136)||(29862053-29862191)
chr1 (1-96)||(3708003-3708098)
chr1 (1-136)||(9781898-9782035)
chr1 (1-136)||(13012577-13012716)
chr1 (1-77)||(3427707-3427783)
chr1 (1-77)||(14334619-14334695)
chr1 (1-77)||(28948388-28948464)
chr1 (1-75)||(36551722-36551796)
chr1 (1-77)||(31652996-31653072)
chr1 (1-128)||(34096279-34096407)
chr1 (28-136)||(47654942-47655050)
chr1 (36-109)||(15417699-15417772)
chr1 (1-74)||(24589829-24589901)
chr1 (1-77)||(37346537-37346611)
chr1 (1-76)||(43190108-43190183)
chr1 (1-77)||(28658582-28658658)
chr1 (1-77)||(5985037-5985112)
chr1 (1-90)||(25257454-25257540)
chr1 (38-128)||(10763917-10764009)
chr1 (43-95)||(2472682-2472734)
chr1 (1-61)||(33040711-33040770)
chr1 (10-69)||(6916049-6916108)
chr1 (10-77)||(8133033-8133100)
chr1 (81-136)||(14334549-14334604)
chr1 (10-69)||(38331311-38331370)
chr1 (49-128)||(41675743-41675822)
chr1 (10-69)||(52894888-52894947)
chr1 (1-41)||(15417920-15417960)
chr1 (81-132)||(37346626-37346678)
[»] chr2 (34 HSPs)
chr2 (1-136)||(4355568-4355703)
chr2 (1-136)||(24585791-24585927)
chr2 (1-136)||(4562045-4562180)
chr2 (1-136)||(14824395-14824530)
chr2 (1-136)||(1005768-1005903)
chr2 (1-136)||(5588294-5588429)
chr2 (1-128)||(31235891-31236018)
chr2 (1-132)||(34146462-34146593)
chr2 (1-136)||(44156854-44156988)
chr2 (1-136)||(28746387-28746523)
chr2 (1-109)||(40536500-40536608)
chr2 (3-136)||(2319553-2319685)
chr2 (9-126)||(3564106-3564223)
chr2 (1-128)||(45158881-45159008)
chr2 (1-111)||(35996812-35996922)
chr2 (4-136)||(8482647-8482779)
chr2 (1-109)||(12206270-12206378)
chr2 (1-128)||(3545286-3545413)
chr2 (1-128)||(35342603-35342730)
chr2 (1-77)||(6125034-6125110)
chr2 (1-77)||(12819663-12819739)
chr2 (1-128)||(40431749-40431876)
chr2 (1-136)||(18301373-18301512)
chr2 (1-75)||(22485132-22485206)
chr2 (1-96)||(10573800-10573896)
chr2 (32-127)||(9293649-9293744)
chr2 (1-75)||(40308017-40308091)
chr2 (1-76)||(6496853-6496927)
chr2 (1-52)||(20537214-20537265)
chr2 (1-70)||(5371430-5371499)
chr2 (1-90)||(4169702-4169790)
chr2 (1-42)||(14216962-14217003)
chr2 (1-70)||(21104817-21104885)
chr2 (10-77)||(7807045-7807112)
[»] chr4 (37 HSPs)
chr4 (1-136)||(47607357-47607492)
chr4 (1-136)||(1177233-1177369)
chr4 (1-109)||(31945954-31946062)
chr4 (1-136)||(44521751-44521886)
chr4 (1-128)||(3109010-3109137)
chr4 (1-136)||(51859051-51859186)
chr4 (1-109)||(30683387-30683495)
chr4 (1-109)||(40694353-40694461)
chr4 (2-136)||(36511658-36511795)
chr4 (1-109)||(7952838-7952946)
chr4 (1-109)||(36943974-36944082)
chr4 (1-109)||(49470581-49470689)
chr4 (1-104)||(52721663-52721767)
chr4 (1-132)||(24784654-24784785)
chr4 (1-128)||(24793436-24793563)
chr4 (1-132)||(24823481-24823612)
chr4 (1-90)||(5325198-5325287)
chr4 (1-101)||(258796-258896)
chr4 (1-109)||(42630183-42630291)
chr4 (1-132)||(17892530-17892661)
chr4 (1-128)||(39957974-39958101)
chr4 (1-136)||(55900853-55900988)
chr4 (1-136)||(51675045-51675179)
chr4 (1-77)||(43509617-43509693)
chr4 (1-128)||(2586602-2586728)
chr4 (1-90)||(14795857-14795946)
chr4 (1-90)||(52573035-52573124)
chr4 (1-77)||(5835291-5835367)
chr4 (1-127)||(14614769-14614888)
chr4 (35-109)||(37992295-37992369)
chr4 (1-90)||(41146454-41146542)
chr4 (1-77)||(28377360-28377436)
chr4 (10-76)||(3402762-3402828)
chr4 (10-69)||(8063282-8063341)
chr4 (37-75)||(53323204-53323242)
chr4 (10-75)||(31227205-31227270)
chr4 (37-73)||(22492932-22492968)
[»] chr7 (42 HSPs)
chr7 (1-136)||(23078814-23078949)
chr7 (1-136)||(48153798-48153933)
chr7 (1-136)||(554617-554752)
chr7 (1-136)||(21409643-21409778)
chr7 (1-128)||(44270003-44270130)
chr7 (10-136)||(23969862-23969988)
chr7 (1-136)||(24956502-24956635)
chr7 (1-128)||(1399973-1400100)
chr7 (1-115)||(36757717-36757831)
chr7 (1-115)||(36767241-36767355)
chr7 (1-77)||(47719860-47719936)
chr7 (1-128)||(19820703-19820830)
chr7 (1-136)||(38064946-38065080)
chr7 (1-77)||(11058748-11058824)
chr7 (1-128)||(15878129-15878256)
chr7 (1-115)||(35160162-35160276)
chr7 (1-115)||(36763497-36763610)
chr7 (1-104)||(9250016-9250120)
chr7 (1-104)||(9283566-9283670)
chr7 (1-104)||(25969813-25969917)
chr7 (1-109)||(44959042-44959150)
chr7 (1-136)||(33454345-33454480)
chr7 (1-90)||(36661313-36661402)
chr7 (1-113)||(35136305-35136417)
chr7 (1-96)||(21180133-21180228)
chr7 (1-77)||(16563935-16564011)
chr7 (1-77)||(16601651-16601727)
chr7 (2-135)||(19510904-19511041)
chr7 (1-77)||(26773273-26773349)
chr7 (1-77)||(47237931-47238007)
chr7 (1-128)||(36413630-36413757)
chr7 (1-107)||(40053573-40053679)
chr7 (1-77)||(1042760-1042836)
chr7 (1-77)||(8029159-8029235)
chr7 (1-90)||(27397299-27397387)
chr7 (1-75)||(4292020-4292094)
chr7 (1-75)||(39521427-39521501)
chr7 (81-136)||(4291948-4292003)
chr7 (10-77)||(16851165-16851232)
chr7 (1-52)||(26973398-26973449)
chr7 (10-69)||(40096531-40096590)
chr7 (1-90)||(11830537-11830625)
[»] chr5 (39 HSPs)
chr5 (1-136)||(3934514-3934649)
chr5 (1-136)||(21251740-21251875)
chr5 (1-136)||(26691895-26692030)
chr5 (1-136)||(26961627-26961762)
chr5 (1-136)||(7629302-7629437)
chr5 (1-136)||(25749862-25749997)
chr5 (1-136)||(26716529-26716664)
chr5 (1-136)||(26986269-26986404)
chr5 (3-136)||(17137962-17138094)
chr5 (1-136)||(1795649-1795785)
chr5 (1-109)||(39796671-39796779)
chr5 (1-136)||(3701342-3701476)
chr5 (1-136)||(27938415-27938550)
chr5 (7-136)||(15066469-15066598)
chr5 (1-128)||(43357487-43357613)
chr5 (3-127)||(6242737-6242861)
chr5 (1-136)||(14836588-14836724)
chr5 (6-136)||(11907569-11907699)
chr5 (10-96)||(34032668-34032754)
chr5 (1-136)||(1921038-1921174)
chr5 (1-109)||(5722282-5722390)
chr5 (1-104)||(30777115-30777219)
chr5 (1-77)||(42365828-42365904)
chr5 (1-98)||(5612178-5612275)
chr5 (1-77)||(39689910-39689986)
chr5 (1-96)||(18001683-18001778)
chr5 (5-136)||(27085627-27085757)
chr5 (1-77)||(10657308-10657384)
chr5 (1-75)||(5985657-5985731)
chr5 (1-75)||(30919009-30919083)
chr5 (1-75)||(41233634-41233708)
chr5 (1-77)||(9654065-9654141)
chr5 (1-64)||(30284305-30284368)
chr5 (1-75)||(26794181-26794255)
chr5 (1-62)||(9728115-9728176)
chr5 (1-72)||(22738170-22738244)
chr5 (10-77)||(9793159-9793226)
chr5 (1-77)||(1638972-1639045)
chr5 (1-42)||(35746121-35746162)
[»] chr3 (46 HSPs)
chr3 (1-128)||(25701049-25701176)
chr3 (1-137)||(7899424-7899560)
chr3 (1-109)||(25322222-25322330)
chr3 (1-136)||(19878808-19878942)
chr3 (1-96)||(212812-212907)
chr3 (1-136)||(20509861-20509996)
chr3 (1-136)||(22289449-22289583)
chr3 (1-128)||(52684613-52684740)
chr3 (1-136)||(35390141-35390284)
chr3 (3-128)||(21006070-21006195)
chr3 (1-128)||(28968797-28968924)
chr3 (1-136)||(45057006-45057141)
chr3 (1-128)||(47642292-47642419)
chr3 (4-109)||(13352903-13353008)
chr3 (1-77)||(2566974-2567050)
chr3 (1-92)||(38888802-38888893)
chr3 (1-102)||(983482-983583)
chr3 (1-98)||(21157465-21157562)
chr3 (1-105)||(2122996-2123100)
chr3 (1-77)||(22311191-22311267)
chr3 (1-67)||(13748225-13748291)
chr3 (1-90)||(48123674-48123763)
chr3 (1-77)||(28882260-28882336)
chr3 (1-75)||(42464320-42464394)
chr3 (10-95)||(19421741-19421826)
chr3 (1-90)||(25936258-25936347)
chr3 (1-90)||(52505003-52505092)
chr3 (1-128)||(29916056-29916184)
chr3 (1-128)||(29965209-29965337)
chr3 (1-77)||(50286927-50287003)
chr3 (1-60)||(30787291-30787350)
chr3 (1-136)||(48333218-48333353)
chr3 (1-75)||(10224339-10224413)
chr3 (10-77)||(1678869-1678936)
chr3 (1-52)||(33241220-33241271)
chr3 (1-59)||(45347907-45347965)
chr3 (1-102)||(47750638-47750739)
chr3 (1-90)||(45532243-45532331)
chr3 (1-77)||(52121625-52121701)
chr3 (10-77)||(1528892-1528959)
chr3 (1-76)||(22610457-22610531)
chr3 (1-59)||(19349326-19349384)
chr3 (1-75)||(28548363-28548437)
chr3 (1-136)||(39664671-39664809)
chr3 (1-42)||(41741872-41741913)
chr3 (10-90)||(28705590-28705670)
[»] chr6 (21 HSPs)
chr6 (8-136)||(10894231-10894359)
chr6 (1-136)||(6707745-6707880)
chr6 (1-132)||(32018378-32018509)
chr6 (1-136)||(19128409-19128545)
chr6 (1-136)||(11105565-11105700)
chr6 (1-109)||(27084257-27084365)
chr6 (1-136)||(13045087-13045221)
chr6 (3-109)||(3299342-3299448)
chr6 (1-70)||(13061080-13061149)
chr6 (1-104)||(3212878-3212982)
chr6 (1-90)||(7187958-7188047)
chr6 (3-136)||(7255199-7255329)
chr6 (4-72)||(13607489-13607557)
chr6 (1-77)||(32130239-32130315)
chr6 (1-62)||(234645-234706)
chr6 (3-101)||(26327608-26327706)
chr6 (1-77)||(8357743-8357818)
chr6 (5-136)||(22988838-22988966)
chr6 (5-136)||(23799430-23799558)
chr6 (10-69)||(1036001-1036060)
chr6 (1-59)||(4153267-4153325)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-132)||(5926-6066)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-90)||(43785-43874)
scaffold0005 (1-127)||(202488-202607)
[»] scaffold0285 (1 HSPs)
scaffold0285 (3-101)||(13690-13788)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-75)||(29824-29898)
[»] scaffold0112 (1 HSPs)
scaffold0112 (1-54)||(41278-41331)


Alignment Details
Target: chr8 (Bit Score: 179; Significance: 9e-97; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 28737911 - 28737689
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||  ||| |||||||||||||| |||    
T  28737911 taaatataaataacattgacgattaaaagagtgatgattagtcaattacatacacaatatatcccaaaaaaagcacaataagtgctatactatatccaaa 28737812  T
Q  101 agaaacattattaatggtatattatatcaatccaaacttaagaaaacacaccccaacccacatgtaacaaaaatcacacaacaccaccatttaaacattc 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  28737811 agaaacattattaatggtatattatatcgatccaaacttaagaaaacacaccccaacccacacgtaacaaaaatcacacaacaccagcatttaaacattc 28737712  T
Q  201 ttcccaattttcatgttaaagcc 223  Q
    |||||||||||||||||||||||    
T  28737711 ttcccaattttcatgttaaagcc 28737689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 37372643 - 37372539
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||    
T  37372643 taaatataaataatattgacgattaagagaatgatgattagtcaattacatacacaatatatcccaaaaagagcaccataagtgctatactatatccaaa 37372544  T
Q  101 agaaa 105  Q
    |||||    
T  37372543 agaaa 37372539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 3892355 - 3892220
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||| |||||||||||| ||| || ||||||||||| |||    
T  3892355 taaatataaataatattgacgattaagagagcgatgattagtcaattacatacacaatatatcctaaaaagagcaccataagtgttatactatatccaaa 3892256  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| || |||| ||||||||||||||    
T  3892255 agaaacattgttagtgctatactatatcaatccaaa 3892220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 27108904 - 27109035
Alignment:
Q  5 tataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaa 104  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| ||||| |    
T  27108904 tataaataatattgacaattaagagagtgatgattagtcaattacatacataatatatcccaaaaagagcacaataagtgctatactatatccaaaagga 27109003  T
Q  105 acattattaatggtatattatatcaatccaaa 136  Q
    | ||| ||| || |||| |||||| |||||||    
T  27109004 aaattgttagtgttatactatatcgatccaaa 27109035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20182780 - 20182653
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||| | |||| ||||||||||| |||    
T  20182780 taaatataaataatattgatgattaagagagtgatgattagtcaattacataaacaatatatcccaaaaagagcaccattaatgttatactatatccaaa 20182681  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  20182680 aggaacattgttagtgttatactatatc 20182653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27968505 - 27968378
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||| | | || ||||||||||| |||    
T  27968505 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagcaccatcagtgttatactatatccaaa 27968406  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  27968405 aggaacattgttagtgttatactatatc 27968378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27886590 - 27886463
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||| |||||||||| || | | || ||||||||||| |||    
T  27886590 taaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagccccatcagtgttatactatatccaaa 27886491  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    ||||||||| ||| || |||| ||||||    
T  27886490 agaaacattgttagtgttatactatatc 27886463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27945248 - 27945121
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||| |||||||||| || | | || ||||||||||| |||    
T  27945248 taaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagccccatcagtgttatactatatccaaa 27945149  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    ||||||||| ||| || |||| ||||||    
T  27945148 agaaacattgttagtgttatactatatc 27945121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 28025491 - 28025364
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||| |||||||||| || | | || ||||||||||| |||    
T  28025491 taaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagccccatcagtgttatactatatccaaa 28025392  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    ||||||||| ||| || |||| ||||||    
T  28025391 agaaacattgttagtgttatactatatc 28025364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 7412015 - 7411880
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||| |||||||||||||||||||| ||| || ||||||||||||| |||| | ||||||||||||||| |||||| | ||||||||| |||||| |||    
T  7412015 taaatgtaaataatattgacgattaagagagtggtgattagtcaattgcataaacaatatatcccaaaaatagcaccatcaatgctatattatatctaaa 7411916  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    | ||||||| ||| || |||| |||||| |||||||    
T  7411915 ataaacattgttagtgttatactatatcgatccaaa 7411880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8170811 - 8170911
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||||| | | |||||||| ||||| |||    
T  8170811 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcagtgctatacaatatccaaa 8170910  T
Q  101 a 101  Q
    |    
T  8170911 a 8170911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40412956 - 40412861
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatc 96  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||||| |   ||||||||||||||    
T  40412956 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgctatactatatc 40412861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 5818058 - 5818193
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccct-aaatgctatactatatcaaa 99  Q
    |||||||||||||||||| | ||||| | | |||||||||||||| |||||||| |||||||||| ||||||||||| | ||||||||||||||||  ||    
T  5818058 taaatataaataatattgtccattaagaaagtgatgattagtcaactacatacacaatatatccc-aaaagagcaccatcaaatgctatactatattcaa 5818156  T
Q  100 aagaaacattattaatggtatattatatcaatccaaa 136  Q
    ||| |||||| ||| || |||| || |||||||||||    
T  5818157 aaggaacattgttagtgctatactacatcaatccaaa 5818193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 41098674 - 41098808
Alignment:
Q  3 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaag 102  Q
    ||||||||||||  |||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||  | | || ||||||||||| ||||     
T  41098674 aatataaataattatgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagagcacaattagtgttatactatatctaaaat 41098773  T
Q  103 aaacattattaatggtatattatatcaatccaaac 137  Q
      ||||| |||||| |||| |||||  ||||||||    
T  41098774 gtacattgttaatgttatactatattgatccaaac 41098808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43770885 - 43770961
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||||||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  43770885 taaatataaataatattgacgattaaaagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 43770961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 32638395 - 32638484
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||| | | ||||||||    
T  32638395 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccatcagtgctatac 32638484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45216401 - 45216490
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||| | | ||||||||    
T  45216401 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccatcattgctatac 45216490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 32996 - 32858
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc---caaaaagagcaccctaaatgctatactatatca 97  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||| | |||||||||    ||||| | || | ||| || |||||||||||     
T  32996 taaatataaataatattgacgattaagagagtgacgattagtcaattacatatacaatatatccaaaaaaaaaaaacatcataagtgttatactatatcc 32897  T
Q  98 aaaagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||||| ||| || |||| |||||  |||||||    
T  32896 aaaagaaacattgttagtgttatactatattgatccaaa 32858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32877994 - 32877918
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  32877994 taaatataaataatattgacgattaatagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 32877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28875746 - 28875820
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  28875746 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 28875820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19436789 - 19436717
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagag 73  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||    
T  19436789 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagag 19436717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19572938 - 19572866
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagag 73  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||    
T  19572938 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagag 19572866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25022691 - 25022615
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||||||   || |||| ||||||||||||||    
T  25022691 taaatataaataatattgacgattaagagagtggtgattagtcaattacatatgcaaaatataccaaaaagagcacc 25022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6029029 - 6028954
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 76  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| | |||||||||||    
T  6029029 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatatacaaaaaagagcac 6028954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 5540359 - 5540285
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||| || | ||||||  |||||||||| ||||||| ||||||||||||    
T  5540359 taaatataaataatattgacgattaagagagtgttcattagtttattacatacacaatatataccaaaaagagca 5540285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42949606 - 42949532
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||| ||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||    
T  42949606 taaatatacataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagca 42949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19947556 - 19947632
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| | | || |||||||||||||||||||  || | || ||||||||||||||    
T  19947556 taaatataaataatattgacgattaacacagtggtgattagtcaattacatacgcaaaacataccaaaaagagcacc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 4246857 - 4246790
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  4246857 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 4246790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 32425316 - 32425226
Alignment:
Q  15 attgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactata-tcaaaaagaa 104  Q
    |||||||||||| ||| |||| ||||| |||||||||||| |||||||||| |||| |||| | | |||| ||||||||| ||||||||||    
T  32425316 attgacgattaagagagtgattattagccaattacatacacaatatatccccaaaatagcatcatcaatgttatactatattcaaaaagaa 32425226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12579710 - 12579762
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 53  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||    
T  12579710 taaatataaataatattgacgattaagagagtgttcattagtcaattacatac 12579762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32760291 - 32760217
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 76  Q
    |||||||||||||||||||||||| | ||| || | |||||||||||||||||  |||||||  ||||||||||||    
T  32760291 taaatataaataatattgacgattgagagagtggtcattagtcaattacatacgaaatatat-acaaaaagagcac 32760217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 37669505 - 37669431
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 76  Q
    |||||||||||||||||||||||| | ||| || | |||||||||||||||||  |||||||  ||||||||||||    
T  37669505 taaatataaataatattgacgattgagagagtggtcattagtcaattacatacgaaatatat-acaaaaagagcac 37669431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36484360 - 36484299
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatat 62  Q
    |||||||||||||||||||||||| | ||| || | |||||||||||||||||  |||||||    
T  36484360 taaatataaataatattgacgattgagagagtggtcattagtcaattacatacgaaatatat 36484299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 38389051 - 38389011
Alignment:
Q  28 agaatgatgattagtcaattacatacataatatatcccaaa 68  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  38389051 agaatgatgattagtcaattacatacacaatatataccaaa 38389011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 34900556 - 34900615
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 69  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  34900556 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 34900615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 10822785 - 10822650
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||    
T  10822785 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccgtaagtgctatactatatccaaa 10822686  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| || ||||||||||| |||||||    
T  10822685 agaaacattgttagtgatatattatatcgatccaaa 10822650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14167460 - 14167326
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||| |||    
T  14167460 taaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaaaaagagcaccataagagctatactatatccaaa 14167361  T
Q  101 agaaacattattaatggtatattatatcaatccaa 135  Q
    ||| ||||| ||| || |||| |||||| ||||||    
T  14167360 agatacattgttagtgttatactatatcgatccaa 14167326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 9528571 - 9528706
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||  || | ||| |||||||||||||| |||    
T  9528571 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaaggacatcataagtgctatactatatccaaa 9528670  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||  ||| || |||| |||||| |||||||    
T  9528671 agaaacatcgttagtgctatactatatcgatccaaa 9528706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24851883 - 24851748
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |   |||||||||||||| |||    
T  24851883 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccatttgtgctatactatatccaaa 24851784  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || |||| |||||| |||||||    
T  24851783 acgaacattgttagtgctatactatatcgatccaaa 24851748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 32797582 - 32797470
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| | |||| ||||||||||| |||    
T  32797582 taaatataagtaatattgacgattaagagagtgatgattagtcaattacatatataatatatcccaaaaagagcaccatcaatgatatactatatccaaa 32797483  T
Q  101 agaaacattatta 113  Q
    |  ||||||||||    
T  32797482 atgaacattatta 32797470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 34432142 - 34432277
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||| |||||||| |||| ||| | ||||||||||||  ||    
T  34432142 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatatctcaaaaagaacaccataagtactatactatatcccaa 34432241  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| || |||| |||||| |||||||    
T  34432242 agaaacattgttagtgttatactatatcgatccaaa 34432277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 32380785 - 32380911
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||| | | || ||||||||||  |||    
T  32380785 taaatataaataatattgacgattaagagagtgatgattagtcgattacatacataatatatcccaaaaagagcaccattagtgttatactatattcaaa 32380884  T
Q  101 agaaacattattaatggtatattatat 127  Q
    || |||||| ||| || |||| |||||    
T  32380885 aggaacattgttagtgttatactatat 32380911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29168338 - 29168230
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||| | ||| || ||||||||||| |||    
T  29168338 taaatataaataatatcgacgattaagagagtgatgattagtcaattacatacacaatatatccaaaaaagagcatcataagtgatatactatatccaaa 29168239  T
Q  101 agaaacatt 109  Q
    |||||||||    
T  29168238 agaaacatt 29168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 37922605 - 37922478
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||| ||||||| ||| | || || | ||||||||||||| |||||||||||||||||||||| | |||||||||||||||| |||    
T  37922605 taaatataaataatattggcgattaagagagttataatcaatcaattacatacacaatatatcccaaaaagagcaccatcaatgctatactatatccaaa 37922506  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    ||||||||| ||| || |||| ||||||    
T  37922505 agaaacattgttagtgctatactatatc 37922478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 29862191 - 29862053
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagag---caccctaaatgctatactatatca 97  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||| |    |||  ||| || |||||||||||     
T  29862191 taaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaaaaaaaaaaacactataagtgatatactatatcc 29862092  T
Q  98 aaaagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||||| ||| ||||||| | ||||||||||||    
T  29862091 aaaagaaacattgttagtggtatactttatcaatccaaa 29862053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3708003 - 3708098
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatc 96  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| |||   | ||||||||||||||    
T  3708003 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagaggaccaccagtgctatactatatc 3708098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 9782035 - 9781898
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccca--aaaagagcaccctaaatgctatactatatcaa 98  Q
    ||||||||||||||||||| |||||| ||| ||| |||||||||||||| |||| |||||||||||  |||| |||||| ||| |||||||||||||| |    
T  9782035 taaatataaataatattgatgattaagagagtgacgattagtcaattacgtacacaatatatcccaaaaaaaaagcaccataagtgctatactatatcca 9781936  T
Q  99 aaagaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||||| ||| || |||| | |||| |||||||    
T  9781935 aaagaaacattgttagtgctatactgtatcgatccaaa 9781898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 13012577 - 13012716
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta----aatgctatactatatc 96  Q
    |||||||||||||||||||| ||||| ||| || |||||||||||||||||||  || |||| |||||||||||||| ||    |||| |||||||||||    
T  13012577 taaatataaataatattgacaattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcaccatacatcaatgttatactatatc 13012676  T
Q  97 aaaaagaaacattattaatggtatattatatcaatccaaa 136  Q
     ||||| ||||||  || || ||||||||||| |||||||    
T  13012677 taaaaggaacattgctagtgctatattatatcgatccaaa 13012716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3427783 - 3427707
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||||||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  3427783 taaatataaataatattgacgattaaaagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 3427707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14334695 - 14334619
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||||||| ||| |||| ||||||||||||||    
T  14334695 taaatataaataatattgacgattaagagagtgttgattagtcaattacatacgtaaaatataccaaaaagagcacc 14334619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28948388 - 28948464
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||| ||||||| ||||||||||||||    
T  28948388 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaaaaagagcacc 28948464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36551796 - 36551722
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||| ||||  |||| |||||||||||| ||||||||||||||||||||    
T  36551796 taaatataaataatattgacgattaagagagtgattgttagccaattacatacacaatatatcccaaaaagagca 36551722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31652996 - 31653072
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  31652996 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 31653072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 34096279 - 34096407
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccc-aaaaagagcaccctaaatgctatactatatcaaa 99  Q
    ||||||||||||||||||| |||||| ||| ||| ||| | ||||||||||||| ||||| |||| ||||| | || | ||| |||||||||||||| ||    
T  34096279 taaatataaataatattgatgattaagagagtgacgatcaatcaattacatacacaatatgtcccaaaaaaaaacatcgtaagtgctatactatatctaa 34096378  T
Q  100 aagaaacattattaatggtatattatatc 128  Q
    |||||||||| ||| || |||| ||||||    
T  34096379 aagaaacattgttagtgctatactatatc 34096407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 47655050 - 47654942
Alignment:
Q  28 agaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatat 127  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| | | | ||||||| |||||| ||||  |||||| ||| || |||| |||||    
T  47655050 agaatgatgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgctatattatatccaaaatgaacattgttagtgttatactatat 47654951  T
Q  128 caatccaaa 136  Q
    | |||||||    
T  47654950 cgatccaaa 47654942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 15417772 - 15417699
Alignment:
Q  36 gattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacatt 109  Q
    ||||||||||||||||| | |||||||||||||||||| ||| | |||| ||||||||||||||||| ||||||    
T  15417772 gattagtcaattacatatacaatatatcccaaaaagaggaccatcaatgttatactatatcaaaaaggaacatt 15417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24589829 - 24589901
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagc 74  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||||||  |||||||||    
T  24589829 taaatataaataatattgacgattaagagagtgatgattagtcaattac-tacacaatatatcttaaaaagagc 24589901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37346537 - 37346611
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| || |||  ||||||||||||||    
T  37346537 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaaaata--ccaaaaagagcacc 37346611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43190183 - 43190108
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 76  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||||  || |||| | |||||||||||    
T  43190183 taaatataaataatattgacgattaagagagtgatgattagtcaaatacatacgcaaaatatacaaaaaagagcac 43190108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28658582 - 28658658
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||   ||||||| ||||||||| ||||    
T  28658582 taaatataaataatattgacgattaagagagtggtcattagtcaattacatatgcaatatataccaaaaagaacacc 28658658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5985112 - 5985037
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || | |||||| ||||||||||  |||||||  |||||||||||||    
T  5985112 taaatataaataatattgacgattaagagagtggtcattagtaaattacatacgcaatatat-acaaaaagagcacc 5985037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 25257540 - 25257454
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| ||  | ||||||||||||||||  |||||||  ||||||||||||| | | ||||||||    
T  25257540 taaatataaataatattgacgattaagagagtg--gtttagtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 25257454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 10764009 - 10763917
Alignment:
Q  38 ttagtcaattacatacataatatatccc--aaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatatc 128  Q
    ||||||||||||||||| ||||||| ||  ||||| |||||| ||| || ||| ||||||| |||||||||||| ||| || |||| ||||||    
T  10764009 ttagtcaattacatacacaatatattccaaaaaaaaagcaccataagtgatattctatatccaaaagaaacatttttagtgctatactatatc 10763917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 2472682 - 2472734
Alignment:
Q  43 caattacatacataatatatcccaaaaagagcaccctaaatgctatactatat 95  Q
    |||||||||||| ||||||||| |||||||||||| | | |||||||||||||    
T  2472682 caattacatacacaatatatcctaaaaagagcaccatcagtgctatactatat 2472734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33040770 - 33040711
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatata 61  Q
    |||||||||||||||||||||||||| ||| |||| |||| |||| |||||||| ||||||    
T  33040770 taaatataaataatattgacgattaagagagtgattattattcaa-tacatacacaatata 33040711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 6916049 - 6916108
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 69  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  6916049 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 6916108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 8133100 - 8133033
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||||||||||| ||| || | ||||| ||||||||||   ||||||| ||||||||||||||    
T  8133100 ataatattgacgattaagagagtggtcattagccaattacatatgcaatatataccaaaaagagcacc 8133033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 14334604 - 14334549
Alignment:
Q  81 aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||||||||| |||||||||||| ||| || |||| |||||| |||||||    
T  14334604 aatgctatactatatccaaaagaaacattgttagtgctatactatatcgatccaaa 14334549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 38331370 - 38331311
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 69  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  38331370 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 38331311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 41675743 - 41675822
Alignment:
Q  49 catacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatatc 128  Q
    |||||| |||||||  ||||||||||| | | |||| ||||||||||| ||||| |||||| |||||| |||| ||||||    
T  41675743 catacacaatatatttcaaaaagagcatcatcaatgttatactatatctaaaagcaacattgttaatgttatactatatc 41675822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 52894888 - 52894947
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 69  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  52894888 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 52894947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15417960 - 15417920
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattag 41  Q
    |||||||||||||||||||||||||| ||| ||| ||||||    
T  15417960 taaatataaataatattgacgattaagagagtgaagattag 15417920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 37346626 - 37346678
Alignment:
Q  81 aatgctatactatatcaaaaa-gaaacattattaatggtatattatatcaatc 132  Q
    ||||||||||||||||||||| | |||||| |||||| |||| ||||||||||    
T  37346626 aatgctatactatatcaaaaagggaacattgttaatgctatactatatcaatc 37346678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 4355703 - 4355568
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||    
T  4355703 taaatataaataatattgacgactaagagagtgatgattagtcaattacatacataatatatcccaaaaagagccccataagtgctatactatatccaaa 4355604  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| || |||| |||||| |||||||    
T  4355603 agaaacattgttagtgttatactatatcgatccaaa 4355568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24585927 - 24585791
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatat-caaa 99  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||| ||||    
T  24585927 taaatataaataatattgacgattaagagagtgaagattagtcaattacatacagaatatatcccaaaaagagtaccataagtgctatactatatccaaa 24585828  T
Q  100 aagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||| ||| || |||| |||||| |||||||    
T  24585827 aagaaacattgttagtgctatactatatcgatccaaa 24585791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 4562180 - 4562045
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||| ||| | |||||||||||| |||    
T  4562180 taaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagtaccataagtactatactatatccaaa 4562081  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||||| ||| || |||| ||||||||||||||    
T  4562080 aggaacattgttagtgatatactatatcaatccaaa 4562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 14824530 - 14824395
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||    
T  14824530 taaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccataagtgctatactatatccaaa 14824431  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || |||| |||||| |||||||    
T  14824430 aagaacattgttagtgctatactatatcgatccaaa 14824395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 1005903 - 1005768
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| |||    
T  1005903 taaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcctaaaaagagcaccataagtgctatactatatccaaa 1005804  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || || ||| ||| || |||| |||||| |||||||    
T  1005803 aggaatattgttagtgttatactatatcgatccaaa 1005768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 5588429 - 5588294
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||| || |||||||| ||| || |||||| |||  |||    
T  5588429 taaatataaataatattgatgattaagagaatgatgattagtcaattacatacacaatatatcccgaagagagcaccataagtgatatactgtatgcaaa 5588330  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| || ||||||||||| |||||||    
T  5588329 agaaacattgttagtgttatattatatcgatccaaa 5588294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 31235891 - 31236018
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| | | |||| ||||||||||| |||    
T  31235891 taaatataaataatattgatgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcatcatcaatgatatactatatccaaa 31235990  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  31235991 aggaacattgttagtgttatactatatc 31236018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 34146593 - 34146462
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||| | | |||| ||||||||||| |||    
T  34146593 taaatataaataatattgacgattaagagagtgatgattagtcaattacctacacaatatatcccaaaaagagcatcatcaatgttatactatatccaaa 34146494  T
Q  101 agaaacattattaatggtatattatatcaatc 132  Q
    || |||| | ||| || |||| ||||||||||    
T  34146493 aggaacactgttagtgctatactatatcaatc 34146462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 44156988 - 44156854
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||  || || ||||||||||| | |    
T  44156988 taaatataaataatattgacgattaaaagagtgatgattagtcaattacatacacaacata-cccaaaaagagcaccacaagtgttatactatatccaga 44156890  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| |  ||||||||||| |||||||    
T  44156889 agaaacattgttagttctatattatatcgatccaaa 44156854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 28746387 - 28746523
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc-caaaaagagcaccctaaatgctatactatatcaaa 99  Q
    ||||||||||||||||||| |||||| ||| ||| ||||||||||||||||||| |||||||||  ||||| |||||| ||| |||||||||||||| ||    
T  28746387 taaatataaataatattgatgattaagagagtgacgattagtcaattacatacacaatatatccaaaaaaaaagcaccataagtgctatactatatccaa 28746486  T
Q  100 aagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||| ||| || |||| |||||| |||||||    
T  28746487 aagaaacattgttattgttatactatatcgatccaaa 28746523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40536608 - 40536500
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| |||||||||||||| | |||| ||||||||||| |||    
T  40536608 taaatataagtaatattgacgattaaaagagtgatgattagtcaattacatatacaatatattccaaaaagagcaccatcaatgttatactatatccaaa 40536509  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  40536508 aggaacatt 40536500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 2319685 - 2319553
Alignment:
Q  3 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||| | | |  | ||||||||||| |||||    
T  2319685 aatataaataatattgacgattaaaagaatgatgattagtcaattaattagaaaatatatcccaaaaagagca-catcatggatatactatatccaaaag 2319587  T
Q  103 aaacattattaatggtatattatatcaatccaaa 136  Q
     |||||| ||| || |||| ||||||||||||||    
T  2319586 gaacattgttagtgttatactatatcaatccaaa 2319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 3564223 - 3564106
Alignment:
Q  9 aataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacat 108  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||| | ||| || ||||||||||| ||||||| |||    
T  3564223 aataatattgacgattaagagagtgatgattagtcaattgcatacacaatatatcccaaaaagagcatcataactgttatactatatccaaaagaagcat 3564124  T
Q  109 tattaatggtatattata 126  Q
    | |||||| |||| ||||    
T  3564123 tgttaatgctatactata 3564106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 45158881 - 45159008
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||||| |   |||||||||||||| |||    
T  45158881 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgctatactatatccaaa 45158980  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    |  |||||| ||| || |||| ||||||    
T  45158981 aagaacatttttagtgctatactatatc 45159008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 35996922 - 35996812
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||||| || |||||||||||||| ||||||| ||| || ||||||||||| |||    
T  35996922 taaatataaataatattgacgattaagagagtgatgattaatcaattacatgcacaatatatcccaaaaggagcaccataagtgttatactatatccaaa 35996823  T
Q  101 agaaacattat 111  Q
    |  ||||||||    
T  35996822 atgaacattat 35996812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 8482647 - 8482779
Alignment:
Q  4 atataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaaga 103  Q
    ||||| ||||||||| ||||||| ||| |||| ||| |||||||||| ||| |||||||||||||| ||||||| |   |||||||||||||| |||||     
T  8482647 atatagataatattgtcgattaagagagtgattattggtcaattacaaacacaatatatcccaaaacgagcaccatcggtgctatactatatccaaaagg 8482746  T
Q  104 aacattattaatggtatattatatcaatccaaa 136  Q
    |||||| |||||| ||||||||||| |||||||    
T  8482747 aacattgttaatgttatattatatcgatccaaa 8482779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12206378 - 12206270
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||| ||||| |||||| | |||| |||| |||||| |||    
T  12206378 taaatataaataatattgacgattaagagagtgatgattagtcaaatacatacaaaatatatccgaaaaaaagcaccatcaatgttatattatatccaaa 12206279  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  12206278 aggaacatt 12206270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 3545286 - 3545413
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||| |||| ||||||||||||| ||||||||| |||| ||||| | | | || ||||||||||| |||    
T  3545286 taaatataaataatattgacgattaagagagtgataattaatcaattacatacacaatatatcctaaaaggagcatcatcagtggtatactatatccaaa 3545385  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    ||||| ||||||| || |||| ||||||    
T  3545386 agaaatattattagtgctatactatatc 3545413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 35342730 - 35342603
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| ||||||||| |||||||||| | | | || |||| |||||| |||    
T  35342730 taaatataaataatattgacgattaagagattgattattagccaattacatacacaatatatcctaaaaagagcatcatcagtgttatattatatccaaa 35342631  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  35342630 aggaacattgttagtgttatactatatc 35342603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6125110 - 6125034
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||||||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  6125110 taaatataaataatattgacgattaaaagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 6125034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12819739 - 12819663
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||||||| ||| |||| ||||||||||||||    
T  12819739 taaatataaataatattgacgattaatagagtggtgattagtcaattacatacgtaaaatataccaaaaagagcacc 12819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 40431749 - 40431876
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||| |||||||||||| |||||| ||| ||||| ||||||||||||||||| || |||||| |||||||||||| |   || ||||||||||| |||    
T  40431749 taaatacaaataatattgatgattaacagagtgatgcttagtcaattacatacacaaaatatcctaaaaagagcaccatcggtgttatactatatccaaa 40431848  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  40431849 aggaacattgttagtgttatactatatc 40431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 18301512 - 18301373
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta----aatgctatactatatc 96  Q
    |||||||||||||||||||| ||||| ||| || |||||||||||||||||||  || |||| |||||||||||||| ||    |||| |||| ||||||    
T  18301512 taaatataaataatattgacaattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcaccatacatcaatgttatattatatc 18301413  T
Q  97 aaaaagaaacattattaatggtatattatatcaatccaaa 136  Q
     ||||| ||||||  || || ||||||||||| |||||||    
T  18301412 caaaaggaacattgctagtgctatattatatcgatccaaa 18301373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22485206 - 22485132
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||| ||||||| ||||||||||||    
T  22485206 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaaaaagagca 22485132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10573896 - 10573800
Alignment:
Q  1 taaatataaataa-tattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatc 96  Q
    ||||||||||||| |||||||||||||  || ||||||||||||||||||||| | |||||||| |||||||||||||   |||| |||||||||||    
T  10573896 taaatataaataaatattgacgattaagtgagtgatgattagtcaattacatatacaatatatctcaaaaagagcaccaccaatgatatactatatc 10573800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 9293744 - 9293649
Alignment:
Q  32 tgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatat 127  Q
    ||||||||||||||||| || |||| |||||||||||||||||||| | |||| ||||||||||| ||||  |||||| ||| || ||||| ||||    
T  9293744 tgatgattagtcaattaaatgcatattatatcccaaaaagagcaccattaatgttatactatatccaaaaagaacattgttagtgctatataatat 9293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 40308017 - 40308091
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| || |||||||||    
T  40308017 taaatataaataatattgacgattaagagagtggtcattagtcaattacatactcaatatataccgaaaagagca 40308091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6496853 - 6496927
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 76  Q
    |||||||||||||||||||||||| ||||| || | |||||||||||||||||  |||||||  ||||||||||||    
T  6496853 taaatataaataatattgacgattgaaagagtggtcattagtcaattacatacgaaatatat-acaaaaagagcac 6496927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20537265 - 20537214
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacata 52  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  20537265 taaatataaataatattgacgattaagagagtggtgattagtcaattacata 20537214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5371499 - 5371430
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaa 70  Q
    |||||||| ||||||||||||||||| ||| || |||||||||||||||||||  || |||| |||||||    
T  5371499 taaatatacataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaa 5371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4169702 - 4169790
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| |  | |||||||||||||||||  ||||| |  ||||||||||||| | | ||||||||    
T  4169702 taaatataaataatattgacgattaagagagtagtcattagtcaattacatacgcaatatgt-acaaaaagagcaccatcagtgctatac 4169790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14216962 - 14217003
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagt 42  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  14216962 taaatataaataatattgacgattaagagagtgatgattagt 14217003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21104885 - 21104817
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaa 70  Q
    |||| ||||||||||||||||||||| ||| |||| || |  |||||||||||| |||||||||||||||    
T  21104885 taaacataaataatattgacgattaagagagtgattataac-caattacatacacaatatatcccaaaaa 21104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 7807045 - 7807112
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||||||||||| ||| || | |||||  ||||||||||  ||||||| ||||||||||||||    
T  7807045 ataatattgacgattaagagagtggtcattagaaaattacatacgcaatatataccaaaaagagcacc 7807112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 4e-40; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 47607492 - 47607357
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| | | |||| |||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||    
T  47607492 taaatataaataatattgacgattaagatagtgataattagtcaattacatacacaatatatcccaaaaagagcaccataagtgctatactatatccaaa 47607393  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||  || ||||||||||| |||||||    
T  47607392 agaaacattgttggtgctatattatatcgatccaaa 47607357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 1177369 - 1177233
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccca-aaaagagcaccctaaatgctatactatatcaaa 99  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||| |||| || ||| ||| |||||||||||||| ||    
T  1177369 taaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaaaaaaaagtaccataagtgctatactatatccaa 1177270  T
Q  100 aagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||| ||| || |||| ||||||||||||||    
T  1177269 aagaaacattgttagtgctatactatatcaatccaaa 1177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 31945954 - 31946062
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||    
T  31945954 taaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccataagtgctatactatatctaaa 31946053  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  31946054 aggaacatt 31946062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 44521751 - 44521886
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| || ||||| |||||| |||||| | | |||||||||||||| |||    
T  44521751 taaatataaataacattgacgattaagagagtgatgattagtcaattacatacacaaaatatctcaaaaaaagcaccattagtgctatactatatccaaa 44521850  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||||| |||||| |||| |||||| |||||||    
T  44521851 aggaacattgttaatgttatactatatcgatccaaa 44521886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 3109010 - 3109137
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||||| |   || ||||||||||| |||    
T  3109010 taaatataaataatattgacgattaaaagagtgattattagccaattacatacacaatatatcccaaaaagagcaccatctgtgttatactatatccaaa 3109109  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  3109110 aggaacattgttagtgttatactatatc 3109137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 51859186 - 51859051
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||||||||||  |  |||||||||||||||||| | || |||||||| ||||||||||| | ||| |||||||||||||| |||    
T  51859186 taaatataaataatattgacgattaagtgggtgatgattagtcaattactttcacaatatatcacaaaaagagcatcataagtgctatactatatccaaa 51859087  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| || |||| |||||| |||||||    
T  51859086 agaaacattgttagtgttatactatatcgatccaaa 51859051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30683387 - 30683495
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||| ||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||| | |||| ||||||||||  |||    
T  30683387 taaatataaataatatcgacgattaagagagtgatgattaatcaattacatatataatatatcccaaaaagagcaccatcaatgttatactatattcaaa 30683486  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  30683487 aggaacatt 30683495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40694461 - 40694353
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||| ||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | ||| || |||| |||||| |||    
T  40694461 taaatataaataatatcgacaattaagagagtgatgattagtcaattacatacgtaatatatcccaaaaagagcatcataagtgatatattatatccaaa 40694362  T
Q  101 agaaacatt 109  Q
    |||||||||    
T  40694361 agaaacatt 40694353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 36511658 - 36511795
Alignment:
Q  2 aaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatc---ccaaaaagagcaccctaaatgctatactatatcaa 98  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||     ||||| | |||| ||| |||||||||||||| |    
T  36511658 aaatataaataatattgacgattaagagagtgacgattagtcaattacatacaaaatatatcaaaaaaaaaaaaacaccataagtgctatactatatcca 36511757  T
Q  99 aaagaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||||| ||| || ||||||||||| |||||||    
T  36511758 aaagaaacattcttagtgctatattatatcgatccaaa 36511795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7952838 - 7952946
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||  | | |||| ||||||||||| |||    
T  7952838 taaatataagtaatattgacgattaaaagagtgatgattaatcaattacatatataatatatcccaaaaggagcgtcatcaatgttatactatatccaaa 7952937  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  7952938 aggaacatt 7952946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36944082 - 36943974
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||| | | | || ||||||||||| |||    
T  36944082 taaatataaataatattgacgattaagagattgattattagccaattacatacacaatatatcccaaaaagagcatcatcagtgttatactatatccaaa 36943983  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  36943982 aggaacatt 36943974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 49470689 - 49470581
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||| | |||||||| ||| | | |||||||||||||||| |||    
T  49470689 taaatataaataatattgacgattaagagagtgatgattaatcaattacatacacaatattttccaaaaagtgcatcatcaatgctatactatatccaaa 49470590  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  49470589 aggaacatt 49470581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 52721767 - 52721663
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactata-tcaaa 99  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | | |||| ||||||||| |||||    
T  52721767 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcaatgatatactatattcaaa 52721668  T
Q  100 aagaa 104  Q
    |||||    
T  52721667 aagaa 52721663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 24784785 - 24784654
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | |   |||||||||||||| |||    
T  24784785 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcggtgctatactatatccaaa 24784686  T
Q  101 agaaacattattaatggtatattatatcaatc 132  Q
    |  ||||||  || || |||| ||||||||||    
T  24784685 aagaacattgatagtgctatactatatcaatc 24784654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 24793436 - 24793563
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||| ||||| |||||||||||||||||||| | | | || ||||||||||| |||    
T  24793436 taaatataaataatattgacgattaagagagtgattattagccaattagatacacaatatatcccaaaaagagcatcatcagtgttatactatatccaaa 24793535  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  24793536 aggaacattgttagtgttatactatatc 24793563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 24823481 - 24823612
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | |   |||||||||||||| |||    
T  24823481 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcggtgctatactatatccaaa 24823580  T
Q  101 agaaacattattaatggtatattatatcaatc 132  Q
    |  ||||||  || || |||| ||||||||||    
T  24823581 aagaacattgatagtgctatactatatcaatc 24823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5325198 - 5325287
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| |||| |||||||||||||||||  ||||||| |||||||||||||| ||| ||||||||    
T  5325198 taaatataaataatattgacgattaagagagtgatcattagtcaattacatacgcaatatataccaaaaagagcaccataagtgctatac 5325287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 258796 - 258896
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| |||||||||| ||| |||| |||||||||||||||||| |||||||| ||||||||| ||| ||| || ||||||||||| |||    
T  258796 taaatataaataatagtgacgattaagagagtgataattagtcaattacatacacaatatatctcaaaaagagtaccataagtgttatactatatccaaa 258895  T
Q  101 a 101  Q
    |    
T  258896 a 258896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 42630183 - 42630291
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||| |||| | | | || |||||| |||| |||    
T  42630183 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccaaaaaaaagcatcatcagtgttatactctatccaaa 42630282  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  42630283 aggaacatt 42630291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17892661 - 17892530
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| ||||||  |||||||||||| | | | || ||||||||||  |||    
T  17892661 taaatataaataatattgacgattaagagagtgattattagacaattacatacacaatataaaccaaaaagagcatcatcagtgttatactatattcaaa 17892562  T
Q  101 agaaacattattaatggtatattatatcaatc 132  Q
    || |||||| ||| || |||| ||||||||||    
T  17892561 aggaacattgttagtgttatactatatcaatc 17892530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 39958101 - 39957974
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | |   || ||||||||||| |||    
T  39958101 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcggtgttatactatatctaaa 39958002  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    |  |||||| ||| || |||| ||||||    
T  39958001 aagaacattgttagtgctatactatatc 39957974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 55900853 - 55900988
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||| ||| | |||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||| | | | ||||||| |||||| |||    
T  55900853 taaatataaattatactcacgattacgagaatgatgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgctatattatatccaaa 55900952  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || |||| |||||| |||||||    
T  55900953 atgaacattgttagtgttatactatatcgatccaaa 55900988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 51675179 - 51675045
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||||| | ||||||| |||||||||| | | ||| || |||||||||| | ||    
T  51675179 taaatataaataatattgacgattaagagagtgatgattaatcaattacatatacaatatat-ccaaaaagagaatcataagtgttatactatattagaa 51675081  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || || ||| ||| || |||| |||||| |||||||    
T  51675080 aggaatattgttagtgatatactatatctatccaaa 51675045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43509617 - 43509693
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  43509617 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 43509693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 2586728 - 2586602
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| |||||| ||  ||||||||| | | | || |||| |||||| |||    
T  2586728 taaatataaataatattgacgattaagagagtgattattagccaattacatacacaatata-cctcaaaagagcatcatcagtgttatattatatccaaa 2586630  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| |||||| |||| ||||||    
T  2586629 aggaacattgttaatgttatactatatc 2586602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14795946 - 14795857
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  |||||||  ||||||||||||| | | ||||||||    
T  14795946 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatatatcaaaaagagcaccatcagtgctatac 14795857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 52573124 - 52573035
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| |||||||||||||| | | ||||||||    
T  52573124 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcagtatataccaaaaagagcaccatcagtgctatac 52573035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5835367 - 5835291
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || ||||  |||||||||||||    
T  5835367 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatatatcaaaaagagcacc 5835291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14614888 - 14614769
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| | | ||||||||||||||| || | |||||| |||  |||||| |||    
T  14614888 taaatataaataatattgacgattaaa-------tgattagtcaattacatatacagtatatcccaaaaagaacatcataaatgttatgttatatccaaa 14614796  T
Q  101 agaaacattattaatggtatattatat 127  Q
    ||||| ||| ||| || ||||||||||    
T  14614795 agaaatattgttagtgctatattatat 14614769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 37992295 - 37992369
Alignment:
Q  35 tgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacatt 109  Q
    ||||||||| |||||||||  |||||||||||||||||||||| | | ||||||| |||||| ||||| ||||||    
T  37992295 tgattagtcgattacatacccaatatatcccaaaaagagcaccattagtgctatattatatccaaaaggaacatt 37992369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 41146542 - 41146454
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||| ||||| ||| || | |||||||||||||||||  |||||||  ||||||||||||| | | ||||||||    
T  41146542 taaatataaataatattgacaattaagagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 41146454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28377436 - 28377360
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||| | ||||| ||| || |||||||||||||||||||  || ||||  |||||||||||||    
T  28377436 taaatataaataatattggcaattaagagagtggtgattagtcaattacatacgcaaaatataacaaaaagagcacc 28377360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 3402762 - 3402828
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 76  Q
    |||||||||| |||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||    
T  3402762 ataatattgatgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcac 3402828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 8063282 - 8063341
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 69  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  8063282 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 8063341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 53323242 - 53323204
Alignment:
Q  37 attagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  53323242 attagtcaattacatacacaatatataccaaaaagagca 53323204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 31227270 - 31227205
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    ||||||||||||||||| ||| || | ||||||||||||||| |  |||| || ||||||||||||    
T  31227270 ataatattgacgattaagagagtggtcattagtcaattacatgcgcaatacataccaaaaagagca 31227205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 22492932 - 22492968
Alignment:
Q  37 attagtcaattacatacataatatatcccaaaaagag 73  Q
    |||||||||||||||| || |||||||||||||||||    
T  22492932 attagtcaattacatatatgatatatcccaaaaagag 22492968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 23078814 - 23078949
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||||| | | | ||||||||||||||||||    
T  23078814 taaatataaataatattgacgattaagagagtgatgattactcaattacatacacaatatatcccaaaaagagcatcatcagtgctatactatatcaaaa 23078913  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||||| ||| || |||| |||||| |||||||    
T  23078914 aggaacattgttagtgctatactatatcgatccaaa 23078949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 48153933 - 48153798
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||  |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||| |||    
T  48153933 taaatataaataatggtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcatcataagtgctatactatatccaaa 48153834  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||||| ||| || |||| |||||| |||||||    
T  48153833 aggaacattgttagtgctatactatatcgatccaaa 48153798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 554617 - 554752
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||| ||||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| | ||| || ||||||||||| |||    
T  554617 taaatataagtaatattaacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcatcataagtgatatactatatctaaa 554716  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||| ||||| ||| || |||| |||||| |||||||    
T  554717 agatacattgttagtgttatactatatcgatccaaa 554752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21409778 - 21409643
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||| |||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | ||| |||||||||||||| |||    
T  21409778 taaatgtaaataatattgacgattaagagagtggtgattagtcaattacatacacaatatattccaaaaagagcaacataagtgctatactatatccaaa 21409679  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||| ||| ||| || |||| |||||| |||||||    
T  21409678 agaaatattgttagtgctatactatatcgatccaaa 21409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 44270130 - 44270003
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||| | |||| ||||||||||| |||    
T  44270130 taaatataaataatattgatgattaagagagtgatgattagtcaattacataaacaatatatcccaaaaagagcaccattaatgttatactatatccaaa 44270031  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  44270030 aggaacattgttagtgttatactatatc 44270003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 23969862 - 23969988
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacatt 109  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||| ||||| ||||||    
T  23969862 ataatagtgacgattaagagagtgatgattagtcaattacatacacaatttatcccaaaaagagcaccataagtgctatactatatccaaaaggaacatt 23969961  T
Q  110 attaatggtatattatatcaatccaaa 136  Q
     ||| || |||| |||||| |||||||    
T  23969962 gttagtgctatactatatcgatccaaa 23969988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 24956635 - 24956502
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaa-tgctatactatatcaaa 99  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||   || ||    
T  24956635 taaatataaataatattgacaattaatagagtgatgattagtcaattacatacataatatatcccaaagagagcaccataaagtgctatact---tccaa 24956539  T
Q  100 aagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||| ||| || |||| |||||| |||||||    
T  24956538 aagaaacattgttagtgctatactatatcgatccaaa 24956502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1399973 - 1400100
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| | | |||| |||||||||||||||||| |||||||||||||||||||| | | |||| ||||||||||| |||    
T  1399973 taaatataaataatattgacgattaagatagtgattattagtcaattacatacacaatatatcccaaaaagagcatcatcaatgttatactatatccaaa 1400072  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  1400073 aggaacattgttagtgttatactatatc 1400100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 36757717 - 36757831
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||||| || |||||| | | |||||||||||||| |||    
T  36757717 taaatataaataacattgatgattaagagagtgatgattagtcaattacatacataatatatcccaagaaaagcaccatcagtgctatactatatccaaa 36757816  T
Q  101 agaaacattattaat 115  Q
    || |||||| |||||    
T  36757817 aggaacattgttaat 36757831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 36767241 - 36767355
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||||| || |||||| | | |||||||||||||| |||    
T  36767241 taaatataaataacattgatgattaagagagtgatgattagtcaattacatacataatatatcccaagaaaagcaccatcagtgctatactatatccaaa 36767340  T
Q  101 agaaacattattaat 115  Q
    || |||||| |||||    
T  36767341 aggaacattgttaat 36767355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47719860 - 47719936
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  47719860 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacataatatataccaaaaagagcacc 47719936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 19820703 - 19820830
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||| ||||||||||||| | | |  ||||||||||| |||    
T  19820703 taaatataaataatattgacgattaaaatagtgatgattagtcaattacatgcacaatatatctcaaaaagagcaccatcagtattatactatatccaaa 19820802  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  19820803 aggaacattgttagtgctatactatatc 19820830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 38065080 - 38064946
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||| |||||||| |||||| | | | ||||||||||||||||||||  |||||||||||||||||||||| | | |||||||||||||| |||    
T  38065080 taaatataaacaatattgatgattaagatagtcatgattagtcaattacatacgcaatatatcccaaaaagagcaccat-agtgctatactatatccaaa 38064982  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||||| ||| || ||||||||||| |||||||    
T  38064981 aggaacattgttagtgttatattatatcgatccaaa 38064946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11058824 - 11058748
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||| |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  11058824 taaatataagtaatattgacgattaagagaatgatgatttgtcaattacatatataatatatcccaaaaagagcacc 11058748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 15878129 - 15878256
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||| | | | || ||||||||||| |||    
T  15878129 taaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcccaaaaagagcatcatcagtgttatactatatccaaa 15878228  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    |  |||||| ||| || |||| ||||||    
T  15878229 atgaacattgttagtgttatactatatc 15878256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 35160276 - 35160162
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||| ||| |  ||||| ||| ||||||||||||||||||||||| ||||||||||||||| |||||| | | |||||||||||||| |||    
T  35160276 taaatataaataacattaataattaagagagtgatgattagtcaattacatacacaatatatcccaaaaaaagcaccattagtgctatactatatccaaa 35160177  T
Q  101 agaaacattattaat 115  Q
    || |||||| |||||    
T  35160176 aggaacattgttaat 35160162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 36763497 - 36763610
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||| ||||||| ||||||| |||||| | | |||||||||||||| |||    
T  36763497 taaatataaataacattgatgattaagagagtgatgattagtcaattacatacacaatatat-ccaaaaaaagcaccatcagtgctatactatatccaaa 36763595  T
Q  101 agaaacattattaat 115  Q
    || |||||| |||||    
T  36763596 aggaacattgttaat 36763610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9250016 - 9250120
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactata-tcaaa 99  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | | | || ||||||||| |||||    
T  9250016 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactatattcaaa 9250115  T
Q  100 aagaa 104  Q
    |||||    
T  9250116 aagaa 9250120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9283566 - 9283670
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactata-tcaaa 99  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | | | || ||||||||| |||||    
T  9283566 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactatattcaaa 9283665  T
Q  100 aagaa 104  Q
    |||||    
T  9283666 aagaa 9283670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25969917 - 25969813
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactata-tcaaa 99  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | | | || ||||||||| |||||    
T  25969917 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactatattcaaa 25969818  T
Q  100 aagaa 104  Q
    |||||    
T  25969817 aagaa 25969813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 44959042 - 44959150
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||  | | || | ||||||||| |||    
T  44959042 taaacataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagagcactatgagtgttgtactatatccaaa 44959141  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  44959142 aggaacatt 44959150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 33454480 - 33454345
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||| |||  ||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||| | | | ||||||| |||||| |||    
T  33454480 taaatataaattataccgacgattaagagaatgatgattagtcgattacatacacaatatataccaaaaagagcatcatcagtgctatattatatccaaa 33454381  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || |||| |||||| |||||||    
T  33454380 atgaacattgttagtgttatactatatcgatccaaa 33454345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36661402 - 36661313
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||| |||||||| |||||||||||||| | | ||||||||    
T  36661402 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgtaatatataccaaaaagagcaccatcagtgctatac 36661313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 35136417 - 35136305
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||| |||||||| | ||||| ||||||||||||||||||||||||| | |||||||| ||||||||||| | | ||||||||| |||||  |||    
T  35136417 taaatataagtaatattggcaattaagagaatgatgattagtcaattacatatacaatatatctcaaaaagagcatcattaatgctataatatattcaaa 35136318  T
Q  101 agaaacattatta 113  Q
    |  ||||||||||    
T  35136317 atgaacattatta 35136305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21180228 - 21180133
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatc 96  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||||||| || | | | || |||||||||||    
T  21180228 taaatataaataatattgacgattaagagagtgatgattagtcaattagatatacaatatatcccaaaaagaacatcatcagtgttatactatatc 21180133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16563935 - 16564011
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  16563935 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 16564011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16601727 - 16601651
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  16601727 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 16601651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 19511041 - 19510904
Alignment:
Q  2 aaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta----aatgctatactatatca 97  Q
    ||||||||||||||||||| ||||| ||| || |||||||||||||||||||  || |||| | |||||||||||| ||    |||| |||||||||||     
T  19511041 aaatataaataatattgacaattaagagagtggtgattagtcaattacatactcaaaatatacaaaaaagagcaccatacatcaatgttatactatatcc 19510942  T
Q  98 aaaagaaacattattaatggtatattatatcaatccaa 135  Q
    ||||| ||||||  || || ||||||||||| ||||||    
T  19510941 aaaaggaacattgctagtgttatattatatcgatccaa 19510904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26773273 - 26773349
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  26773273 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 26773349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47237931 - 47238007
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| | | ||||||||||||||||||||||  || |||| ||||||||||||||    
T  47237931 taaatataaataatattgacgattaagaaagtgatgattagtcaattacatacgcaaaatataccaaaaagagcacc 47238007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 36413757 - 36413630
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||| ||||||  || ||||| ||| ||||||||||||| ||||||||| |||||||||| | |   || ||||||||||| |||    
T  36413757 taaatataaataatattgatgattaagtgagtgatgcttaatcaattacatacacaatatatcctaaaaagagcatcatcggtgttatactatatccaaa 36413658  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  36413657 aggaacattgttagtgttatactatatc 36413630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40053679 - 40053573
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||| || ||| ||| |||||||||||||||||||||   |||||| | ||||||||||||| | | || ||||||||||| |||    
T  40053679 taaatataaataatattgatgactaagagagtgatgattagtcaattacatatgcaatatacctcaaaaagagcaccatcagtgttatactatatccaaa 40053580  T
Q  101 agaaaca 107  Q
    || ||||    
T  40053579 aggaaca 40053573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1042760 - 1042836
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||| ||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  1042760 taaatataaataatattgacaattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 1042836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8029235 - 8029159
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||| ||||||||  || |||| ||||||||||||||    
T  8029235 taaatataaataatattgacgattaagagagtggtgattagtcacttacatacgcaaaatataccaaaaagagcacc 8029159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27397299 - 27397387
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  |||||||  ||||||||||||| | | ||||||||    
T  27397299 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 27397387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4292094 - 4292020
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||| |||| |||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||    
T  4292094 taaatataaatactattaacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagca 4292020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39521501 - 39521427
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||| || | |||| ||||||||||||  ||||||| | ||||||||||    
T  39521501 taaatataaataatattgacgattaagagagtggtcattaatcaattacatacgcaatatatacaaaaaagagca 39521427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 4292003 - 4291948
Alignment:
Q  81 aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||||||||| ||||| |||||| |||||| |||| |||||| |||||||    
T  4292003 aatgctatactatatccaaaaggaacattgttaatgttatactatatcgatccaaa 4291948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 16851232 - 16851165
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||||||||||| ||| || | |||||  ||||||||||  ||||||| ||||||||||||||    
T  16851232 ataatattgacgattaagagagtggtcattagataattacatacgcaatatataccaaaaagagcacc 16851165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26973449 - 26973398
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacata 52  Q
    |||||||||||||||||||||||||| ||| |||  |||| |||||||||||    
T  26973449 taaatataaataatattgacgattaagagagtgacaattactcaattacata 26973398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 40096590 - 40096531
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 69  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  40096590 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 40096531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11830625 - 11830537
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||| ||||| | | || | ||| |||||||||||||  |||||||  ||||||||||||| | | ||||||||    
T  11830625 taaatataaataatattgacaattaagatagtggtcattggtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 11830537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 3934514 - 3934649
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||| || | ||| || ||||||||||| |||    
T  3934514 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagatcatcataagtgttatactatatccaaa 3934613  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| || ||||||||||| |||||||    
T  3934614 agaaacattgttagtgttatattatatcgatccaaa 3934649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21251875 - 21251740
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||| |||| | | |||||||||||||| |||    
T  21251875 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcgcaaaaagaacaccatcagtgctatactatatccaaa 21251776  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||||| |||||| |||| |||||| |||||||    
T  21251775 aggaacattgttaatgctatactatatcgatccaaa 21251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 26692030 - 26691895
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||||||||||| |||    
T  26692030 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccatcaatgttatactatatccaaa 26691931  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||||| ||| || |||| | |||| |||||||    
T  26691930 aggaacattgttagtgttatactctatcgatccaaa 26691895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 26961762 - 26961627
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||||||||||| |||    
T  26961762 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccatcaatgttatactatatccaaa 26961663  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||||| ||| || |||| | |||| |||||||    
T  26961662 aggaacattgttagtgttatactctatcgatccaaa 26961627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 7629437 - 7629302
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |||||||||||||||||||| | | | |||||||||||||| |||    
T  7629437 taaatataaataatattggcgattaagagagtgatgattagtcaatgacatacacaatatatcccaaaaagagcatcattagtgctatactatatccaaa 7629338  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||| ||||| ||| || |||| |||||| |||||||    
T  7629337 agatacattgttagtgctatactatatcgatccaaa 7629302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 25749997 - 25749862
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||| |||||||| |||    
T  25749997 taaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagagcaccataagtgctacactatatccaaa 25749898  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || ||||||| ||| |||||||    
T  25749897 atgaacattgttagtgctatattacatcgatccaaa 25749862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 26716664 - 26716529
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||  || ||||||||||| |||    
T  26716664 taaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccataggtgttatactatatccaaa 26716565  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || |||| |||||| |||||||    
T  26716564 atgaacattgttagtgctatactatatcgatccaaa 26716529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 26986404 - 26986269
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||  || ||||||||||| |||    
T  26986404 taaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccataggtgttatactatatccaaa 26986305  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || |||| |||||| |||||||    
T  26986304 atgaacattgttagtgctatactatatcgatccaaa 26986269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 17137962 - 17138094
Alignment:
Q  3 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaag 102  Q
    |||||||||||||||||||||||| ||| |||||||||||||| || ||||| |||||||||| ||||||||||| | ||||||||| |||||  |||||    
T  17137962 aatataaataatattgacgattaagagagtgatgattagtcaaatatatacacaatatatccc-aaaagagcaccatcaatgctatattatatgcaaaag 17138060  T
Q  103 aaacattattaatggtatattatatcaatccaaa 136  Q
     |||||| ||| || |||||||||||||||||||    
T  17138061 gaacattgttagtgctatattatatcaatccaaa 17138094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 1795785 - 1795649
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccca-aaaagagcaccctaaatgctatactatatcaaa 99  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||| | ||||||||||| |||| |||||| ||| || ||||||||||| ||    
T  1795785 taaatataaataatattgacgattaagagagtgacgattagtcaattacatatacaatatatcccaaaaaaaagcaccataagtgttatactatatccaa 1795686  T
Q  100 aagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||| ||| || |||| |||||| |||||||    
T  1795685 aagaaacattgttagtgctatactatatcgatccaaa 1795649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39796671 - 39796779
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||| | |||| ||||||||||| |||    
T  39796671 taaatataagtaatattgacgattaagagagtgatgattagtcaattacatatacaatatatcccaaaaagagcaccatcaatgttatactatatctaaa 39796770  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  39796771 aggaacatt 39796779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 3701476 - 3701342
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||||| || ||||||| |||||||||||||| | | |||||||||||||| |||    
T  3701476 taaatataaaaaatattgacgattaagagagtgatgattagtcaattacatgcacaatatat-ccaaaaagagcaccatcagtgctatactatatccaaa 3701378  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||||| ||| || |||| |||||| |||||||    
T  3701377 aggaacattgttagtgttatactatatcgatccaaa 3701342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 27938550 - 27938415
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| |||||||||| ||| |||| |||||||||||||||||| |||||||||||||||||||||| ||  |||||||||||||| |||    
T  27938550 taaatataaataatagtgacgattaagagagtgataattagtcaattacatacacaatatatcccaaaaagagcaccatacgtgctatactatatccaaa 27938451  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || |||| | ||| || || | |||||| |||||||    
T  27938450 aggaacactgttagtgctacactatatcgatccaaa 27938415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 15066598 - 15066469
Alignment:
Q  7 taaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaac 106  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||| | | ||||||||||||||  |||| |||    
T  15066598 taaataatattgacgattaagagagtaatgattagtcaattacatacacaatatatcccaaaaagagcaccatcagtgctatactatatccgaaaggaac 15066499  T
Q  107 attattaatggtatattatatcaatccaaa 136  Q
    ||| ||| || |||| |||||  |||||||    
T  15066498 attgttagtgttatactatattgatccaaa 15066469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 43357487 - 43357613
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccc-aaaaagagcaccctaaatgctatactatatcaaa 99  Q
    |||||||||||||||||||||||||| ||| ||| |||  ||||||||||||||||||||||||| ||||| |||||| ||| | |||||||||||| ||    
T  43357487 taaatataaataatattgacgattaagagagtgacgat--gtcaattacatacataatatatcccaaaaaaaagcaccataagtactatactatatccaa 43357584  T
Q  100 aagaaacattattaatggtatattatatc 128  Q
    |||||||||| ||| || |||| ||||||    
T  43357585 aagaaacattgttagtgctatactatatc 43357613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 6242737 - 6242861
Alignment:
Q  3 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaag 102  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||| |||||| |   |||||||||||||| ||||     
T  6242737 aatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatataccaaaaaaagcaccatcggtgctatactatatccaaaaa 6242836  T
Q  103 aaacattattaatggtatattatat 127  Q
     |||||| ||| || |||| |||||    
T  6242837 gaacattgttagtgttatactatat 6242861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 14836724 - 14836588
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaa-aaagagcaccctaaatgctatactatatcaaa 99  Q
    ||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||| |||||||| ||| ||| |||||| ||| || ||||||||||| ||    
T  14836724 taaatataaataatattgacggttaagagagtgacgattagtcaattacatacaaaatatatctcaataaaaagcaccataagtgttatactatatccaa 14836625  T
Q  100 aagaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||| || ||| || |||| |||||| |||||||    
T  14836624 aagaaactttgttagtgatatactatatcgatccaaa 14836588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 11907699 - 11907569
Alignment:
Q  6 ataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaa 105  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||||| | | || ||||||||||| |||||  |    
T  11907699 ataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcagtgttatactatatccaaaaggta 11907600  T
Q  106 cattattaatggtatattatatcaatccaaa 136  Q
    |||| ||  || |||| |||||| |||||||    
T  11907599 cattgttggtgttataatatatcgatccaaa 11907569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 34032754 - 34032668
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatc 96  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||||||| | | ||||||||||||||    
T  34032754 ataatattgacgattaagagagtgatgattaatcaattacatacacaatatatcccaaaaagagcaccatcagtgctatactatatc 34032668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 1921174 - 1921038
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||  ||||||| || |||||||||||||||||||| | | | || ||||||||||| |||    
T  1921174 taaatataaataatattgacgattaagagagtgatgattagtatattacatgcaaaatatatcccaaaaagagcatcatcagtgatatactatatccaaa 1921075  T
Q  101 agaaacattattaatggt-atattatatcaatccaaa 136  Q
    || | |||| ||| || | |||||||||| |||||||    
T  1921074 aggatcattgttagtgttaatattatatcgatccaaa 1921038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 5722390 - 5722282
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||| ||| |||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||| | | | ||||||| |||||| |||    
T  5722390 taaatataaattatactgacgattaagagaatgatgattagtcgattacatacacaatatataccaaaaagagcatcatcagtgctatattatatccaaa 5722291  T
Q  101 agaaacatt 109  Q
    | |||||||    
T  5722290 ataaacatt 5722282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 30777115 - 30777219
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactata-tcaaa 99  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | | | || ||||||||| |||||    
T  30777115 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactatattcaaa 30777214  T
Q  100 aagaa 104  Q
    |||||    
T  30777215 aagaa 30777219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42365828 - 42365904
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||||    
T  42365828 taaatataaataatattgacgattaacagagtgatgattagtcaattagatgcacaatatatcccaaaaagagcacc 42365904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5612178 - 5612275
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaa 98  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||| ||   | | ||||||||||||||||    
T  5612178 taaatatgaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccccaaaagaacattgttagtgctatactatatcaa 5612275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39689910 - 39689986
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||| ||||||| ||||||||||||||    
T  39689910 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaaaaagagcacc 39689986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18001683 - 18001778
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatc 96  Q
    |||||||||||||||||||| | ||| ||| ||||||||| |||||||||||   |||||||||||||||||||||| | | ||||||||||||||    
T  18001683 taaatataaataatattgacaagtaagagagtgatgattaatcaattacatatccaatatatcccaaaaagagcaccatcagtgctatactatatc 18001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 27085757 - 27085627
Alignment:
Q  5 tataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaa 104  Q
    ||||||||||||||| |||||| | | |||| |||||||||||||||||| ||||||| ||||||||||||||   | |||||||||||||  ||||  |    
T  27085757 tataaataatattgatgattaagaaagtgataattagtcaattacatacacaatatat-ccaaaaagagcaccacgagtgctatactatattcaaaatga 27085659  T
Q  105 acattattaatggtatattatatcaatccaaa 136  Q
    ||||| ||| || ||||||||||| |||||||    
T  27085658 acattgttagtgctatattatatcgatccaaa 27085627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10657384 - 10657308
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  10657384 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 10657308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5985657 - 5985731
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||    
T  5985657 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagca 5985731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30919083 - 30919009
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  30919083 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 30919009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41233708 - 41233634
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||||| |  |||||| ||||||||||||    
T  41233708 taaatataaataatattgacgattaagagcgtgatgattagtcaattacatatacgatatataccaaaaagagca 41233634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9654141 - 9654065
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||| ||||||| || ||||| | |||||||||||||||||| |||||| |||||||| |||||||||||||    
T  9654141 taaatataagtaatattaacaattaagaaaatgatgattagtcaattgcatacacaatatatcacaaaaagagcacc 9654065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30284305 - 30284368
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc 64  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| | ||| |||||||||    
T  30284305 taaatataaataatattgacgattaagagagtgatgattagtcaattagaaacacaatatatcc 30284368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26794181 - 26794255
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||| ||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  26794181 taaatataaataatattgacaattaagagagtgctcattagtcaattacatacgcaatatataccaaaaagagca 26794255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9728115 - 9728176
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatat 62  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||||||| |||| |||||||    
T  9728115 taaatataaataatattgatgattaagagagtgatgattagtcaattacgtacacaatatat 9728176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22738244 - 22738170
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgat---tagtcaattacatacataatatatcccaaaaaga 72  Q
    ||||||||||||||||| |||||||| ||| |||||||   |||||| ||||||||| |||||||||||||||||    
T  22738244 taaatataaataatattaacgattaagagagtgatgatatttagtcagttacatacacaatatatcccaaaaaga 22738170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 9793226 - 9793159
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  9793226 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 9793159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1638972 - 1639045
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||||||||||||||||||  |||| || | |||||||||||||||||  |||||||  |||||||||||||    
T  1638972 taaatataaataatattgacgatt--aagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcacc 1639045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35746121 - 35746162
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagt 42  Q
    |||||||||||||||||||| ||||| ||| |||||||||||    
T  35746121 taaatataaataatattgacaattaagagagtgatgattagt 35746162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 25701176 - 25701049
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||||||| | | |||||||||||||| |||    
T  25701176 taaatataaataatattgacgattaagagagtgatgattagtcaattacaaacacaatatatcccaaaaagagcaccgtcagtgctatactatatccaaa 25701077  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    || |||||| ||| || |||| ||||||    
T  25701076 aggaacattgttagtgttatactatatc 25701049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 7899424 - 7899560
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||||| | | || ||||||| ||| |||    
T  7899424 taaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcccaaaaagagcaccatcagtgttatactacatccaaa 7899523  T
Q  101 agaaacattattaatggtatattatatcaatccaaac 137  Q
    |||||||||  || || |||| |||||| ||||||||    
T  7899524 agaaacattgctagtgctatactatatcgatccaaac 7899560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25322222 - 25322330
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||  | |||| ||||||||||| |||    
T  25322222 taaatataagtaatattgacgattaagagagtgatgattagtcaattacatatataatatatcccaaaaagagcactatcaatgttatactatatccaaa 25322321  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  25322322 aggaacatt 25322330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 19878808 - 19878942
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||   | ||||||| |||||| |||    
T  19878808 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatat-ccaaaaagagcaccaccagtgctataatatatccaaa 19878906  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || || ||| ||| || ||||||||||| |||||||    
T  19878907 aggaatattgttagtgatatattatatcgatccaaa 19878942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 212907 - 212812
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatc 96  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||||||| | | | ||||||||||||||    
T  212907 taaatataaataatattgacgattaagagagtgattattagtcaattacatacataatatatctcaaaaagagcaacatgagtgctatactatatc 212812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 20509861 - 20509996
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||| | |||| ||||||||||| |||    
T  20509861 taaatataaataatagtgatgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaggagcaccatcaatgatatactatatccaaa 20509960  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || |||| ||| || |||||||    
T  20509961 atgaacattgttagtgttatactatgtcgatccaaa 20509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 22289449 - 22289583
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||  ||||||||||||||| | |||| ||| || ||||||||||| |||    
T  22289449 taaatataaataatattgacgattaatagagtgatgattattcaattacataccgaatatatcccaaaaa-aacaccataagtgttatactatatccaaa 22289547  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| || | || |||||| |||||||    
T  22289548 agaaacattgttagtgttgtactatatcgatccaaa 22289583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 52684740 - 52684613
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| |||||||||||||| |   || ||||||||||| |||    
T  52684740 taaatataaataatattgacgattaaaagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgttatactatatccaaa 52684641  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    |  |||||| ||| || |||| ||||||    
T  52684640 aagaacattgttagtgttatactatatc 52684613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 35390284 - 35390141
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc--------ctaaatgctatacta 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||||         | |||| |||||||    
T  35390284 taaatataaataatattgacgattaagagaatgatgattagtcaattacatacgtaaaatataccaaaaagagcaccagtgtcatatcaatgttatacta 35390185  T
Q  93 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||| ||||| |||||| |||||| |||| |||||| |||||||    
T  35390184 tatccaaaaggaacattgttaatgttatactatatcgatccaaa 35390141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 21006070 - 21006195
Alignment:
Q  3 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaag 102  Q
    |||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||||| |   |||||||||||||| ||||     
T  21006070 aatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgctatactatatccaaaaa 21006169  T
Q  103 aaacattattaatggtatattatatc 128  Q
     |||||| ||| || |||| ||||||    
T  21006170 gaacattgttagtgttatactatatc 21006195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 28968924 - 28968797
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||| ||||| ||| |||| ||||  |||||||||||| |||||||||||||||||||| | | |||| ||||||||||| |||    
T  28968924 taaatataaataatattgacaattaatagagtgattattaaccaattacatacacaatatatcccaaaaagagcatcatcaatgttatactatatccaaa 28968825  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    |  |||||| ||| || |||||||||||    
T  28968824 atgaacattgttagtgttatattatatc 28968797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 45057006 - 45057141
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||  || ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||||   | |||||||||||||  |||    
T  45057006 taaatataaataatatcaacaattaagagagtgatgattagtcaattacatacacaatatatcctaaaaagagcaccagcagtgctatactatatacaaa 45057105  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    ||||||||| ||| || | || |||||| |||||||    
T  45057106 agaaacattgttagtgttgtactatatcgatccaaa 45057141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 47642419 - 47642292
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| |||||||| ||||||||||| | | |||| ||||||||||| |||    
T  47642419 taaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcacaaaaagagcatcatcaatgttatactatatccaaa 47642320  T
Q  101 agaaacattattaatggtatattatatc 128  Q
    |  |||||| ||| || |||| ||||||    
T  47642319 aagaacattgttagtgttatactatatc 47642292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 13352903 - 13353008
Alignment:
Q  4 atataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaaga 103  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||| ||||| | |||| | |||| ||||||||||| |||||     
T  13352903 atataaataatattgaggattaaaagtatgataattagtcaattacatacacaatatatcctaaaaacaacaccattaatgatatactatatccaaaagg 13353002  T
Q  104 aacatt 109  Q
    ||||||    
T  13353003 aacatt 13353008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2566974 - 2567050
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  2566974 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcacc 2567050  T

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Target: chr3; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38888802 - 38888893
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 92  Q
    |||||||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||| ||||||||||| | | |||| |||||||    
T  38888802 taaatataaataatattgacgattaagacagtgatgattagtcaattacatacacaatatatctcaaaaagagcatcatcaatgttatacta 38888893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 983583 - 983482
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||| ||||||||  |||||||||||| | | ||||||||||| || |||    
T  983583 taaatataaataatattgacgaataagagagtgatgattaatcaattacatacacaatatatcataaaaagagcaccatcagtgctatactatgtccaaa 983484  T
Q  101 ag 102  Q
    ||    
T  983483 ag 983482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21157465 - 21157562
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaa 98  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||| ||   | | ||||||||||||||||    
T  21157465 taaatatgaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccccaaaagaacattgttagtgctatactatatcaa 21157562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 2123100 - 2122996
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    ||||||||||||||||||||||||||  |  |||||||||||||||||| | || |||||||||||||||||||| | ||| || |||| |||||| |||    
T  2123100 taaatataaataatattgacgattaagtgggtgatgattagtcaattactttcacaatatatcccaaaaagagcatcataagtgttatattatatccaaa 2123001  T
Q  101 agaaa 105  Q
    |||||    
T  2123000 agaaa 2122996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22311267 - 22311191
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| || |||| ||||||||||||||    
T  22311267 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaagatataccaaaaagagcacc 22311191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13748225 - 13748291
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaa 67  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||    
T  13748225 taaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaa 13748291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48123763 - 48123674
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||| | | ||||||||    
T  48123763 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccatcagtgctatac 48123674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28882260 - 28882336
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  28882260 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 28882336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42464320 - 42464394
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  42464320 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 42464394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 19421826 - 19421741
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatat 95  Q
    |||| ||||| | |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| | | ||||||| |||||    
T  19421826 ataaaattgatgcttaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccattagtgctatattatat 19421741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25936258 - 25936347
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||| ||||||||||||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||| | | ||||||||    
T  25936258 taaatataaacaatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccattagtgctatac 25936347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 52505003 - 52505092
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| | |||||||||||| | | ||||||||    
T  52505003 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatatactaaaaagagcaccattagtgctatac 52505092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 29916184 - 29916056
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatg-attagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaa 99  Q
    |||||||||||||||||| |||| || ||| ||||| ||||||| |||||||| | ||||||||||||||||| |||| | | || ||||||||||| ||    
T  29916184 taaatataaataatattgtcgatcaagagagtgatggattagtcgattacataaacaatatatcccaaaaagaacaccatcagtgttatactatatccaa 29916085  T
Q  100 aagaaacattattaatggtatattatatc 128  Q
    ||  |||||| ||| || |||| ||||||    
T  29916084 aatgaacattgttagtgttatactatatc 29916056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 29965337 - 29965209
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatg-attagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaa 99  Q
    |||||||||||||||||| |||| || ||| ||||| ||||||| |||||||| | ||||||||||||||||| |||| | | || ||||||||||| ||    
T  29965337 taaatataaataatattgtcgatcaagagagtgatggattagtcgattacataaacaatatatcccaaaaagaacaccatcagtgttatactatatccaa 29965238  T
Q  100 aagaaacattattaatggtatattatatc 128  Q
    ||  |||||| ||| || |||| ||||||    
T  29965237 aatgaacattgttagtgttatactatatc 29965209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 50286927 - 50287003
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||||||||||| |||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  50286927 taaatataaataatattaacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 50287003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30787291 - 30787350
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatat 60  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||    
T  30787291 taaatataaataatattaacgattaagagagtgatgattagtcaattacatacacaatat 30787350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 48333353 - 48333218
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||| ||||||||||| ||||| ||| ||| | | |||||| |||||||| |||||||||| |||||| |||| | | || ||||||||||| |||    
T  48333353 taaatatatataatattgacaattaagagagtgacggtcagtcaactacatacacaatatatcccgaaaagaacaccatcagtgttatactatatccaaa 48333254  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || || ||| ||| || |||| |||||| |||||||    
T  48333253 aggaatattgttagtgctatactatatcgatccaaa 48333218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10224339 - 10224413
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||||| ||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  10224339 taaatataaataatattgacaattaagagagtgctcattagtcaattacatacgcaatatataccaaaaagagca 10224413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 1678869 - 1678936
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  1678869 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 1678936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33241271 - 33241220
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacata 52  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  33241271 taaatataaataatattgacgattaagagagtggtgattagtcaattacata 33241220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45347965 - 45347907
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataata 59  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||| ||| ||||    
T  45347965 taaatataaataatattgacgattaagagagtgacgattagtcaattacaaacacaata 45347907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 47750638 - 47750739
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataata-tatcccaaaaagagcaccctaaatgctatactatatcaaa 99  Q
    ||||||||| ||||||||| |||||| ||| ||||||||| ||||||||||| | |||| |||||| ||||||||||| | |||  ||||||||||| ||    
T  47750638 taaatataagtaatattgaagattaagagagtgatgattaatcaattacatatacaatattatccc-aaaagagcaccatcaatattatactatatccaa 47750736  T
Q  100 aag 102  Q
    |||    
T  47750737 aag 47750739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45532243 - 45532331
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||  || | |||||||||||||||||  |||||||  ||||||||||||| | | ||||||||    
T  45532243 taaatataaataatattgacgattaagagggtggtcattagtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 45532331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 52121701 - 52121625
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||| |||| |||||||| ||| || |||||||||||||||||||  || ||||  |||||||||||||    
T  52121701 taaatataaatattatttacgattaagagagtggtgattagtcaattacatacgcaaaatatatcaaaaagagcacc 52121625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 1528959 - 1528892
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    ||||||||||||||||| ||| || | |||||  ||||||||||| ||||||| ||||||||||||||    
T  1528959 ataatattgacgattaagagagtggtcattaggtaattacatacacaatatataccaaaaagagcacc 1528892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22610457 - 22610531
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 76  Q
    |||||||||||||||||||||||| | ||| || | |||||||||||||||||  |||||||  ||||||||||||    
T  22610457 taaatataaataatattgacgattgagagagtggtcattagtcaattacatacgaaatatat-acaaaaagagcac 22610531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19349326 - 19349384
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataata 59  Q
    ||||||||||| |||||||||||||| |||  || ||||||||||||||||||| ||||    
T  19349326 taaatataaattatattgacgattaagagagcgacgattagtcaattacatacacaata 19349384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28548437 - 28548363
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    |||||||||||||||||  ||||||| ||| |||| |||||||||||||||| | | |||| | |||||||||||    
T  28548437 taaatataaataatattaccgattaagagagtgataattagtcaattacatatacactataactcaaaaagagca 28548363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 39664809 - 39664671
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc----caaaaagagcaccctaaatgctatactatatc 96  Q
    ||||||||||||||||||| |||||| ||| ||| |||| |||||||| ||| | |||||||||     ||||| |  ||| ||| ||||||||||||||    
T  39664809 taaatataaataatattgatgattaagagagtgacgatttgtcaattatata-acaatatatccaaaaaaaaaaaaataccataagtgctatactatatc 39664711  T
Q  97 aaaaagaaacattattaatggtatattatatcaatccaaa 136  Q
     |||||||||||| | | || |||| ||||||||| ||||    
T  39664710 caaaagaaacattgtcagtgttatactatatcaatacaaa 39664671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41741872 - 41741913
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagt 42  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  41741872 taaatataaataatattgacgattaagagagtgatgattagt 41741913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 28705670 - 28705590
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    ||||||||||||||||| ||| || | ||||| ||||||||||   ||||||| |||||||||||||| | |||| |||||    
T  28705670 ataatattgacgattaagagagtggtcattagacaattacatatgcaatatataccaaaaagagcaccatcaatgttatac 28705590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 10894231 - 10894359
Alignment:
Q  8 aaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaaca 107  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||| |||| | | |||||||||||||| ||||| ||||    
T  10894231 aaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcacaaaaagaacaccatcagtgctatactatatccaaaaggaaca 10894330  T
Q  108 ttattaatggtatattatatcaatccaaa 136  Q
    || ||| || |||| |||||| |||||||    
T  10894331 ttgttagtgctatactatatcgatccaaa 10894359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 6707745 - 6707880
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||| ||||||||| ||||||| | |||||||||||||||| |||    
T  6707745 taaatataaataatattgacgattaagagagtgatgattaatcaattacatacacaatacatcccaaaaggagcaccatcaatgctatactatatccaaa 6707844  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || |||| |||||  |||||||    
T  6707845 atgaacattgttagtgttatactatattgatccaaa 6707880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 32018509 - 32018378
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||||| |   |||||||||||||| |||    
T  32018509 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgctatactatatccaaa 32018410  T
Q  101 agaaacattattaatggtatattatatcaatc 132  Q
    |  |||||| ||| || |||| ||||||||||    
T  32018409 aagaacattgttagtgttatactatatcaatc 32018378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 19128545 - 19128409
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc-caaaaagagcaccctaaatgctatactatatcaaa 99  Q
    |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||| |||||||||  ||||| |||||| ||| || ||||||||||| ||    
T  19128545 taaatataaataatgttgacgattaagagagtgacgattagtcaattacatacacaatatatccaaaaaaaaagcaccataagtgttatactatatccaa 19128446  T
Q  100 aagaaacattattaatggtatattatatcaatccaaa 136  Q
    |||||||||| ||| || |||| |||||| |||||||    
T  19128445 aagaaacattgttagtgctatactatatcgatccaaa 19128409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 11105700 - 11105565
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| || | ||||| ||||||||||||||||||||||||||||||||||| | | || |||  |||||| |||    
T  11105700 taaatataaataatattgacgattaagagagtggttattagccaattacatacataatatatcccaaaaagagcaccatcagtgttattttatatccaaa 11105601  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    |  |||||| ||| || |||| ||||||||||||||    
T  11105600 atgaacattgttagtgttatactatatcaatccaaa 11105565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 27084365 - 27084257
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||| |||||||||||||||||||| | ||| || |||||||||||  ||    
T  27084365 taaatataaataatattgacaattaagagagtgatggttagtcaattacatacacaatatatcccaaaaagagcatcataagtgttatactatatccgaa 27084266  T
Q  101 agaaacatt 109  Q
    || ||||||    
T  27084265 aggaacatt 27084257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 13045087 - 13045221
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||| ||||| |||||| | | ||| |||||||||| |||    
T  13045087 taaatataaataatattgacgattaagagagtgatgattagccaattacatacacaatatatcctaaaaa-agcaccatcagtgcaatactatatccaaa 13045185  T
Q  101 agaaacattattaatggtatattatatcaatccaaa 136  Q
    || || ||  ||| || |||| ||||||||||||||    
T  13045186 aggaagatcgttagtgttatactatatcaatccaaa 13045221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 3299448 - 3299342
Alignment:
Q  3 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaag 102  Q
    ||||||||||| ||| |||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||| | | ||||||| |||||| |||||    
T  3299448 aatataaataacattaacgattaagagagtaatgattagtcaattacatacacaatatatcccaaaaagagcaccatcagtgctataatatatccaaaag 3299349  T
Q  103 aaacatt 109  Q
     ||||||    
T  3299348 gaacatt 3299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13061080 - 13061149
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13061080 taaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaa 13061149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3212982 - 3212878
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactata-tcaaa 99  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| | | | || ||||||||| |||||    
T  3212982 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactatattcaaa 3212883  T
Q  100 aagaa 104  Q
    |||||    
T  3212882 aagaa 3212878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7187958 - 7188047
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| |||| |||||| ||||||||||| ||||||| |||||||||||||| | | ||||||||    
T  7187958 taaatataaataatattgacgattaagagagtgatcattagttaattacatacacaatatataccaaaaagagcaccatcagtgctatac 7188047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 7255329 - 7255199
Alignment:
Q  3 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaag 102  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    |||| ||||||||||| |||||||||  | | |||||||||||||| |||||    
T  7255329 aatataaataatattgacgattaagagagtgatgattagtcaat----tacacaatatatcccacaaagagcacaatcagtgctatactatatccaaaag 7255234  T
Q  103 aaaca-ttattaatggtatattatatcaatccaaa 136  Q
     |||| || |||||| |||| |||||| |||||||    
T  7255233 gaacatttgttaatgttatactatatcgatccaaa 7255199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 13607489 - 13607557
Alignment:
Q  4 atataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaaga 72  Q
    ||||||| |||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  13607489 atataaacaatattgatgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaaga 13607557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32130239 - 32130315
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  32130239 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 32130315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 234706 - 234645
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatat 62  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||    
T  234706 taaatataaataatattgacgattaagagagtgatgattagtcaactacatacacaatatat 234645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 26327706 - 26327608
Alignment:
Q  3 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaa 101  Q
    ||||||||||||  |||||||||| ||| ||||||||||||| ||||||| | |||||||| ||||||||||||  | | || ||||||||||| ||||    
T  26327706 aatataaataattatgacgattaagagagtgatgattagtcagttacatagacaatatatctcaaaaagagcacaattagtgttatactatatctaaaa 26327608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8357818 - 8357743
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 77  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  |||||||  |||||||||||||    
T  8357818 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcacc 8357743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 22988838 - 22988966
Alignment:
Q  5 tataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaa 104  Q
    ||||| ||||||||||||||||  || ||||||||||||||    ||||| |||||||||||||| || |||| | | || |||||| |||| ||||| |    
T  22988838 tataagtaatattgacgattaagcgagtgatgattagtcaaa---atacacaatatatcccaaaaggaacaccatcagtgttatactgtatccaaaagga 22988934  T
Q  105 acattattaatggtatattatatcaatccaaa 136  Q
    ||||| ||| || |||| |||||| |||||||    
T  22988935 acattgttagtgctatactatatcgatccaaa 22988966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 23799558 - 23799430
Alignment:
Q  5 tataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaa 104  Q
    ||||| ||||||||||||||||  || ||||||||||||||    ||||| |||||||||||||| || |||| | | || |||||| |||| ||||| |    
T  23799558 tataagtaatattgacgattaagcgagtgatgattagtcaaa---atacacaatatatcccaaaaggaacaccatcagtgttatactgtatccaaaagga 23799462  T
Q  105 acattattaatggtatattatatcaatccaaa 136  Q
    ||||| ||| || |||| |||||| |||||||    
T  23799461 acattgttagtgctatactatatcgatccaaa 23799430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 1036001 - 1036060
Alignment:
Q  10 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 69  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  1036001 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 1036060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4153267 - 4153325
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataata 59  Q
    ||||||||||||||||| |||||||| ||| ||||||| | |||||||| |||| ||||    
T  4153267 taaatataaataatattaacgattaagagagtgatgatcactcaattacttacacaata 4153325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 6066 - 5926
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc-----------ctaaatgctata 89  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||| || |||  ||||||||||||||            | |||||||||    
T  6066 taaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaaaata--ccaaaaagagcaccatcggtgttatatcaatgctata 5969  T
Q  90 ctatatcaaaaagaaacattattaatggtatattatatcaatc 132  Q
    ||||||||||||| |||||| |||||| |||| ||||||||||    
T  5968 ctatatcaaaaaggaacattgttaatgttatactatatcaatc 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 43785 - 43874
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 90  Q
    |||||||||||||||||||||||||| ||| || | |||||||||||||||||  |||||||  ||||||||||||| | | ||||||||    
T  43785 taaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatatatcaaaaagagcaccatcagtgctatac 43874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 202488 - 202607
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaa 100  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| | | ||||||||||||||| || | |||||| |||  |||||| |||    
T  202488 taaatataaataatattgacgattaaa-------tgattagtcaattacatatacagtatatcccaaaaagaacatcataaatgttatgttatatccaaa 202580  T
Q  101 agaaacattattaatggtatattatat 127  Q
    ||||| ||| ||| || ||||||||||    
T  202581 agaaatattgttagtgctatattatat 202607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 13788 - 13690
Alignment:
Q  3 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaa 101  Q
    ||||||||||||  |||||||||| ||| ||||||||||||||| ||||||| |||||||  ||||||||||||  | | || ||||||||||| ||||    
T  13788 aatataaataattatgacgattaagagagtgatgattagtcaatgacatacacaatatatatcaaaaagagcacaattagtgttatactatatctaaaa 13690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29824 - 29898
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 75  Q
    ||||||||||||||||| |||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  29824 taaatataaataatattaacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 29898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41278 - 41331
Alignment:
Q  1 taaatataaataatattgacgattaaaagaatgatgattagtcaattacataca 54  Q
    ||||||||||||||||| |||||||| ||| || | ||||||||||||||||||    
T  41278 taaatataaataatattaacgattaagagagtggtcattagtcaattacataca 41331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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