View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10381_high_15 (Length: 237)

Name: NF10381_high_15
Description: NF10381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10381_high_15
NF10381_high_15
[»] chr8 (39 HSPs)
chr8 (3-196)||(17026969-17027162)
chr8 (3-196)||(17557461-17557654)
chr8 (3-163)||(33417359-33417520)
chr8 (3-163)||(40125000-40125161)
chr8 (3-166)||(38181385-38181553)
chr8 (7-166)||(1808280-1808444)
chr8 (3-166)||(18875488-18875656)
chr8 (3-163)||(1910053-1910219)
chr8 (44-166)||(44925024-44925146)
chr8 (11-166)||(15950675-15950838)
chr8 (44-166)||(26779975-26780097)
chr8 (50-166)||(23547707-23547822)
chr8 (3-166)||(2966408-2966578)
chr8 (3-120)||(19168588-19168712)
chr8 (44-158)||(22714109-22714223)
chr8 (3-88)||(17026746-17026833)
chr8 (3-88)||(17557238-17557325)
chr8 (105-166)||(28559219-28559280)
chr8 (105-164)||(28564400-28564459)
chr8 (49-161)||(24672427-24672539)
chr8 (165-223)||(1909946-1910004)
chr8 (165-223)||(1808489-1808547)
chr8 (165-223)||(40124893-40124951)
chr8 (165-212)||(15950582-15950629)
chr8 (165-212)||(17021294-17021341)
chr8 (165-212)||(17551731-17551778)
chr8 (165-223)||(38181281-38181339)
chr8 (165-223)||(7002684-7002742)
chr8 (7-130)||(33100227-33100356)
chr8 (165-223)||(2966624-2966682)
chr8 (160-205)||(17953164-17953209)
chr8 (171-223)||(28564297-28564348)
chr8 (92-142)||(17797974-17798025)
chr8 (168-211)||(44924932-44924975)
chr8 (166-212)||(18875395-18875441)
chr8 (165-223)||(28559116-28559173)
chr8 (3-52)||(17021181-17021229)
chr8 (3-52)||(17551618-17551666)
chr8 (60-163)||(17953251-17953351)
[»] chr6 (45 HSPs)
chr6 (3-166)||(11533804-11533972)
chr6 (3-166)||(11559314-11559482)
chr6 (3-166)||(11569794-11569963)
chr6 (3-166)||(5856810-5856978)
chr6 (3-163)||(6406966-6407127)
chr6 (3-163)||(16835268-16835430)
chr6 (3-163)||(17963664-17963825)
chr6 (15-166)||(25313576-25313734)
chr6 (15-166)||(26201070-26201228)
chr6 (11-166)||(2699218-2699378)
chr6 (3-166)||(20747400-20747568)
chr6 (3-163)||(12405466-12405632)
chr6 (3-163)||(14509802-14509967)
chr6 (3-166)||(19994487-19994662)
chr6 (3-163)||(33686749-33686914)
chr6 (3-164)||(11613008-11613175)
chr6 (44-164)||(17914463-17914583)
chr6 (3-124)||(4156480-4156606)
chr6 (3-121)||(8748589-8748708)
chr6 (3-133)||(11428790-11428926)
chr6 (165-223)||(11569691-11569749)
chr6 (65-163)||(17600270-17600370)
chr6 (111-163)||(22610449-22610501)
chr6 (165-223)||(6406859-6406917)
chr6 (165-223)||(11428996-11429054)
chr6 (165-223)||(17600416-17600474)
chr6 (165-223)||(33686643-33686701)
chr6 (3-114)||(22694518-22694641)
chr6 (171-223)||(22694384-22694436)
chr6 (165-223)||(11533701-11533759)
chr6 (165-223)||(11559211-11559269)
chr6 (165-223)||(12690007-12690065)
chr6 (165-223)||(12797781-12797839)
chr6 (165-223)||(17963557-17963615)
chr6 (165-223)||(20747296-20747354)
chr6 (58-161)||(19674657-19674761)
chr6 (165-223)||(16835160-16835219)
chr6 (180-223)||(19674826-19674869)
chr6 (165-223)||(12405359-12405417)
chr6 (61-165)||(12689859-12689961)
chr6 (162-208)||(25313487-25313533)
chr6 (162-208)||(26200981-26201027)
chr6 (182-223)||(2699113-2699154)
chr6 (126-163)||(12797892-12797929)
chr6 (125-157)||(29891988-29892020)
[»] chr2 (47 HSPs)
chr2 (1-166)||(25477392-25477562)
chr2 (3-166)||(25496487-25496655)
chr2 (3-166)||(12797754-12797922)
chr2 (3-163)||(30651743-30651904)
chr2 (3-163)||(1934097-1934258)
chr2 (3-163)||(9179834-9179994)
chr2 (3-163)||(12361077-12361239)
chr2 (3-163)||(17974456-17974618)
chr2 (3-163)||(9184525-9184685)
chr2 (11-166)||(29678511-29678671)
chr2 (3-163)||(17968069-17968229)
chr2 (3-163)||(18345236-18345406)
chr2 (54-163)||(19891611-19891719)
chr2 (3-163)||(40846688-40846854)
chr2 (50-164)||(24537128-24537242)
chr2 (49-144)||(12002030-12002125)
chr2 (49-166)||(25637866-25637984)
chr2 (46-162)||(34495213-34495325)
chr2 (165-223)||(12797969-12798027)
chr2 (58-154)||(32080261-32080357)
chr2 (165-223)||(12361284-12361342)
chr2 (165-223)||(17974350-17974408)
chr2 (165-223)||(25496383-25496441)
chr2 (165-223)||(30651953-30652011)
chr2 (166-223)||(20101649-20101706)
chr2 (167-223)||(1934008-1934064)
chr2 (58-161)||(28603970-28604074)
chr2 (165-223)||(18345455-18345513)
chr2 (50-119)||(20103259-20103329)
chr2 (73-161)||(42925782-42925871)
chr2 (165-223)||(17967963-17968021)
chr2 (165-223)||(42925675-42925733)
chr2 (174-223)||(9179725-9179774)
chr2 (174-223)||(9184416-9184465)
chr2 (165-223)||(19891506-19891564)
chr2 (165-223)||(25477288-25477346)
chr2 (161-223)||(28604120-28604182)
chr2 (165-223)||(31329101-31329159)
chr2 (165-223)||(31335822-31335880)
chr2 (166-211)||(29678718-29678763)
chr2 (73-163)||(15446388-15446480)
chr2 (126-166)||(19896903-19896943)
chr2 (58-163)||(31328946-31329052)
chr2 (58-163)||(31335667-31335773)
chr2 (58-159)||(44630558-44630660)
chr2 (77-142)||(7735433-7735497)
chr2 (169-212)||(19896991-19897034)
[»] chr5 (52 HSPs)
chr5 (3-163)||(6154538-6154700)
chr5 (3-163)||(26668107-26668268)
chr5 (3-163)||(26939704-26939865)
chr5 (3-163)||(37537044-37537205)
chr5 (3-163)||(37646163-37646324)
chr5 (3-166)||(12103879-12104047)
chr5 (3-163)||(37247905-37248067)
chr5 (3-163)||(39519224-39519385)
chr5 (3-163)||(39523863-39524024)
chr5 (3-163)||(36424467-36424628)
chr5 (3-164)||(20180258-20180421)
chr5 (3-163)||(29167079-29167240)
chr5 (3-163)||(7452582-7452745)
chr5 (6-158)||(6511740-6511900)
chr5 (3-163)||(36430348-36430508)
chr5 (3-76)||(40148725-40148798)
chr5 (99-162)||(10759468-10759531)
chr5 (165-223)||(26668317-26668375)
chr5 (165-223)||(26939914-26939972)
chr5 (46-164)||(16115334-16115451)
chr5 (86-163)||(17162769-17162847)
chr5 (165-223)||(37247798-37247856)
chr5 (165-223)||(39524063-39524121)
chr5 (165-223)||(29166972-29167030)
chr5 (165-223)||(36424677-36424735)
chr5 (165-223)||(37646054-37646112)
chr5 (165-223)||(39519424-39519482)
chr5 (86-163)||(17159288-17159367)
chr5 (165-223)||(6154431-6154489)
chr5 (165-223)||(7452794-7452852)
chr5 (165-223)||(23757163-23757221)
chr5 (165-223)||(23822619-23822677)
chr5 (50-163)||(35679004-35679118)
chr5 (165-223)||(37536936-37536994)
chr5 (56-152)||(22832636-22832732)
chr5 (174-223)||(40150243-40150292)
chr5 (171-223)||(20180154-20180206)
chr5 (127-166)||(40148797-40148836)
chr5 (165-223)||(4872921-4872979)
chr5 (166-223)||(35678897-35678954)
chr5 (111-163)||(23689009-23689061)
chr5 (165-212)||(36430557-36430604)
chr5 (109-143)||(15149601-15149635)
chr5 (117-163)||(40567708-40567754)
chr5 (58-161)||(4872771-4872870)
chr5 (186-222)||(12104105-12104141)
chr5 (49-100)||(15413861-15413912)
chr5 (112-154)||(2847801-2847842)
chr5 (112-154)||(2859638-2859679)
chr5 (173-211)||(6511614-6511652)
chr5 (58-163)||(9725873-9725978)
chr5 (166-212)||(10759371-10759417)
[»] chr1 (35 HSPs)
chr1 (3-163)||(10136154-10136315)
chr1 (3-161)||(51040629-51040788)
chr1 (3-166)||(16648733-16648901)
chr1 (1-166)||(19798098-19798268)
chr1 (3-163)||(25844585-25844746)
chr1 (3-163)||(26926825-26926987)
chr1 (3-163)||(10140922-10141083)
chr1 (6-151)||(33300379-33300529)
chr1 (54-163)||(11807100-11807209)
chr1 (3-122)||(38621537-38621661)
chr1 (87-166)||(47450296-47450375)
chr1 (58-163)||(12260860-12260966)
chr1 (50-133)||(8138510-8138593)
chr1 (3-102)||(39199924-39200028)
chr1 (58-163)||(16036490-16036596)
chr1 (58-161)||(39586186-39586290)
chr1 (165-223)||(10136364-10136422)
chr1 (165-223)||(25844795-25844853)
chr1 (58-153)||(46697220-46697315)
chr1 (165-221)||(51040522-51040578)
chr1 (165-212)||(38622228-38622275)
chr1 (112-163)||(23191943-23191994)
chr1 (165-223)||(16036645-16036703)
chr1 (166-212)||(16648639-16648685)
chr1 (165-223)||(23191838-23191896)
chr1 (3-45)||(47450448-47450490)
chr1 (179-223)||(26926728-26926772)
chr1 (1-52)||(16834302-16834353)
chr1 (119-162)||(38622135-38622178)
chr1 (124-163)||(40166891-40166930)
chr1 (168-212)||(8138634-8138678)
chr1 (123-162)||(39199878-39199917)
chr1 (174-223)||(19797993-19798041)
chr1 (170-223)||(40166984-40167037)
chr1 (168-212)||(46697355-46697399)
[»] chr7 (43 HSPs)
chr7 (3-161)||(26342036-26342195)
chr7 (3-166)||(8269125-8269293)
chr7 (3-167)||(42625685-42625854)
chr7 (3-163)||(12256846-12257012)
chr7 (3-161)||(3880793-3880956)
chr7 (4-162)||(12800216-12800379)
chr7 (3-163)||(4931052-4931213)
chr7 (3-166)||(3046398-3046567)
chr7 (50-166)||(21672083-21672198)
chr7 (3-166)||(10392192-10392362)
chr7 (3-132)||(27238980-27239114)
chr7 (50-166)||(12181855-12181974)
chr7 (3-163)||(10387456-10387623)
chr7 (3-223)||(2595652-2595867)
chr7 (44-160)||(23152177-23152293)
chr7 (46-161)||(6590121-6590236)
chr7 (3-132)||(23247877-23248011)
chr7 (44-134)||(44509585-44509674)
chr7 (54-166)||(9814978-9815091)
chr7 (54-166)||(10716903-10717016)
chr7 (73-158)||(16373248-16373333)
chr7 (3-151)||(27246664-27246818)
chr7 (165-223)||(4931262-4931320)
chr7 (165-223)||(12802321-12802379)
chr7 (165-223)||(42625577-42625635)
chr7 (166-223)||(23247558-23247615)
chr7 (49-157)||(30258956-30259065)
chr7 (58-163)||(13313420-13313527)
chr7 (165-224)||(21672243-21672302)
chr7 (165-219)||(12257060-12257114)
chr7 (165-223)||(23151685-23151743)
chr7 (165-212)||(44508306-44508353)
chr7 (165-223)||(3881010-3881068)
chr7 (126-164)||(23247663-23247701)
chr7 (174-223)||(10392086-10392135)
chr7 (52-125)||(23319797-23319870)
chr7 (165-212)||(8269347-8269394)
chr7 (58-163)||(26286264-26286369)
chr7 (58-154)||(15973608-15973702)
chr7 (126-163)||(44508435-44508472)
chr7 (182-222)||(10387346-10387386)
chr7 (173-223)||(3046620-3046670)
chr7 (165-223)||(30259301-30259359)
[»] chr3 (41 HSPs)
chr3 (3-163)||(7570321-7570481)
chr3 (2-166)||(20520785-20520954)
chr3 (3-163)||(14437796-14437966)
chr3 (3-163)||(23660595-23660756)
chr3 (3-163)||(23665227-23665388)
chr3 (3-163)||(27709760-27709921)
chr3 (7-166)||(46964842-46965006)
chr3 (3-163)||(18468041-18468202)
chr3 (3-163)||(55326606-55326767)
chr3 (3-163)||(18472835-18472996)
chr3 (3-163)||(39774931-39775092)
chr3 (3-162)||(55432058-55432216)
chr3 (6-166)||(12970911-12971078)
chr3 (3-163)||(757470-757629)
chr3 (3-140)||(3419817-3419960)
chr3 (3-166)||(12964986-12965154)
chr3 (3-108)||(32473183-32473290)
chr3 (50-164)||(12111690-12111808)
chr3 (165-223)||(46965051-46965109)
chr3 (165-223)||(757363-757421)
chr3 (165-223)||(7570214-7570272)
chr3 (165-223)||(20521000-20521058)
chr3 (165-223)||(23660488-23660546)
chr3 (165-223)||(23665120-23665178)
chr3 (165-223)||(18473045-18473103)
chr3 (165-223)||(20175429-20175487)
chr3 (58-163)||(29351111-29351217)
chr3 (165-223)||(18468250-18468309)
chr3 (165-223)||(12970807-12970865)
chr3 (181-223)||(32473143-32473185)
chr3 (165-223)||(55326816-55326873)
chr3 (58-163)||(3656363-3656472)
chr3 (165-223)||(14437692-14437747)
chr3 (165-223)||(38891155-38891213)
chr3 (165-223)||(55432264-55432321)
chr3 (170-223)||(3656256-3656309)
chr3 (108-154)||(12565247-12565296)
chr3 (165-223)||(12964882-12964941)
chr3 (108-154)||(13259646-13259695)
chr3 (165-223)||(27709967-27710025)
chr3 (181-223)||(3426125-3426167)
[»] chr4 (65 HSPs)
chr4 (3-166)||(16421871-16422039)
chr4 (3-163)||(8694542-8694703)
chr4 (3-163)||(31728471-31728632)
chr4 (3-163)||(37263669-37263830)
chr4 (3-166)||(13060291-13060459)
chr4 (3-166)||(51698751-51698922)
chr4 (3-163)||(31274343-31274504)
chr4 (3-161)||(32081273-32081435)
chr4 (16-166)||(55252482-55252637)
chr4 (3-166)||(19907073-19907241)
chr4 (3-163)||(37258969-37259130)
chr4 (3-166)||(13064913-13065081)
chr4 (3-163)||(31766701-31766863)
chr4 (3-163)||(5270528-5270690)
chr4 (3-162)||(33468109-33468268)
chr4 (4-161)||(32220672-32220832)
chr4 (3-166)||(29349308-29349478)
chr4 (4-159)||(33462464-33462619)
chr4 (50-166)||(2820670-2820785)
chr4 (3-123)||(5927363-5927484)
chr4 (82-163)||(12823016-12823097)
chr4 (44-160)||(23093980-23094096)
chr4 (44-134)||(39216233-39216323)
chr4 (165-222)||(12822910-12822967)
chr4 (60-163)||(12875290-12875394)
chr4 (50-166)||(40408819-40408940)
chr4 (165-223)||(8694752-8694810)
chr4 (165-223)||(16422085-16422143)
chr4 (165-223)||(31274553-31274611)
chr4 (165-223)||(37263562-37263620)
chr4 (165-223)||(5270422-5270480)
chr4 (165-223)||(31728365-31728423)
chr4 (165-223)||(33462357-33462414)
chr4 (165-223)||(51698968-51699026)
chr4 (166-223)||(33468002-33468059)
chr4 (58-161)||(19102850-19102954)
chr4 (121-163)||(5925901-5925943)
chr4 (105-163)||(19107510-19107568)
chr4 (121-163)||(27183183-27183225)
chr4 (3-47)||(12823112-12823156)
chr4 (165-223)||(37258864-37258920)
chr4 (165-223)||(8029334-8029392)
chr4 (165-223)||(12875443-12875501)
chr4 (165-223)||(19907327-19907385)
chr4 (58-163)||(48275942-48276048)
chr4 (58-162)||(16948885-16948990)
chr4 (108-156)||(39216186-39216234)
chr4 (165-223)||(13060505-13060564)
chr4 (165-223)||(55252683-55252742)
chr4 (165-223)||(2820831-2820888)
chr4 (173-223)||(5925803-5925853)
chr4 (83-162)||(6943684-6943773)
chr4 (166-212)||(8028165-8028211)
chr4 (165-223)||(19103005-19103063)
chr4 (165-224)||(13064811-13064867)
chr4 (179-223)||(27183278-27183322)
chr4 (105-161)||(28601561-28601617)
chr4 (171-223)||(40408989-40409041)
chr4 (85-155)||(8029469-8029540)
chr4 (165-212)||(32220574-32220621)
chr4 (165-223)||(29349206-29349263)
chr4 (165-223)||(48275838-48275896)
chr4 (165-212)||(32081178-32081222)
chr4 (130-162)||(16958263-16958295)
chr4 (91-142)||(29985109-29985161)
[»] scaffold0002 (4 HSPs)
scaffold0002 (3-163)||(4893-5054)
scaffold0002 (4-163)||(443045-443209)
scaffold0002 (165-215)||(442947-442997)
scaffold0002 (165-223)||(5103-5161)
[»] scaffold0054 (4 HSPs)
scaffold0054 (6-166)||(30005-30170)
scaffold0054 (166-223)||(30217-30274)
scaffold0054 (58-163)||(26325-26431)
scaffold0054 (167-223)||(26482-26538)
[»] scaffold0352 (2 HSPs)
scaffold0352 (3-163)||(7937-8099)
scaffold0352 (165-223)||(8148-8206)
[»] scaffold0057 (2 HSPs)
scaffold0057 (3-166)||(35948-36115)
scaffold0057 (165-223)||(36160-36218)
[»] scaffold0690 (2 HSPs)
scaffold0690 (3-163)||(6056-6222)
scaffold0690 (166-223)||(6272-6329)
[»] scaffold0240 (2 HSPs)
scaffold0240 (74-166)||(4872-4965)
scaffold0240 (160-223)||(5003-5066)
[»] scaffold0595 (1 HSPs)
scaffold0595 (124-166)||(3906-3948)
[»] scaffold0011 (1 HSPs)
scaffold0011 (166-212)||(64904-64950)


Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 17026969 - 17027162
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  17026969 gaggaaacaaactattggatttgaatgaagaaaatataataataattaaattcttattcttatcacaaccaccttaagctaaatttatgaaaagtgatat 17027068  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgcacactctattttatcaattcacacaacatta 196  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  17027069 tctcgaataaaaataataattagtattatttttatgattatcaagtatttaaaattaaatac--cacaatctattttttcaattcacacaacatta 17027162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 17557461 - 17557654
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  17557461 gaggaaacaaactattggatttgaatgaagaaaatataataataattaaattcttattcttatcacaaccaccttaagctaaatttatgaaaagtgatat 17557560  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgcacactctattttatcaattcacacaacatta 196  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  17557561 tctcgaataaaaataataattagtattatttttatgattatcaagtatttaaaattaaatac--cacaatctattttttcaattcacacaacatta 17557654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 33417359 - 33417520
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||    
T  33417359 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccgccataagctaaatttatagaaagtgatat 33417458  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33417459 tctcgaataaaa-taataattactattatttttatcattatcaagtatttaaaattaaatacc 33417520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 40125161 - 40125000
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  40125161 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaacaaccataagctaaatttatggaaagtgatat 40125062  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40125061 tctcaaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 40125000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 38181553 - 38181385
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||     |||||||||||||||||||||| ||| |||| ||||||||||| |||||     
T  38181553 gaggaaacaaactattgaatttgaataaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccctaagttaaatttatgggaagtgg 38181454  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38181453 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 38181385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 1808280 - 1808444
Alignment:
Q  7 aaacaaactattggatttgaatgaagaaaatataaga-----aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatatt 101  Q
    |||||||||||| ||||||||||||| |||||||| |     |||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  1808280 aaacaaactattagatttgaatgaaggaaatataaaaaatttaattaaattcttattcttatcacaaccaccataagctaaatttatagaaaatgatatt 1808379  T
Q  102 ctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
     || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1808380 ttcaaataaaaataataattactattatttttatcattatcaaatatttaaaattaaataccgca 1808444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 18875656 - 18875488
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| ||||     ||||||| ||||||||| | |||||| |||||||||||||| |||    
T  18875656 gaggaaacaaactattggatatgaatgaaggaaatataagaaatttaatttaattcttattcatatcacaaccatcataagttaaatttatggaaaatga 18875557  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18875556 tattctcgaataaaaacaataattactattatttgtatcattatcaagtatttaaaattaaataccgca 18875488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 1910219 - 1910053
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||  ||||||||||  ||||||    
T  1910219 gaggaaataaactattggatttgaatgaaggaaatataagaaattcaattaaattcttattcttatcacaaccaccataaattaaatttatgagaagtga 1910120  T
Q  98 tattctcgaataaaaataataattactattat-ttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  1910119 tattctcgaataaaaatagcaattactattattttttatcattatcaagtatttaaaattaaatacc 1910053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 44925146 - 44925024
Alignment:
Q  44 aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatca 143  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44925146 aattaaattcttattcttatcacaaccaccataagataaatttatgggaaatgatattctcgaataaaaataataattactgttatttttatcattatca 44925047  T
Q  144 agtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||    
T  44925046 agtatttaaaattaaataccgca 44925024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 15950838 - 15950675
Alignment:
Q  11 aaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcg 105  Q
    ||||||||||||| |||| ||| ||||||||||||||     |||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||    
T  15950838 aaactattggattggaatcaaggaaatataagaaattcaattaaattcttattcttatcacaactactataagctaaatatatgggaagtgatattctcg 15950739  T
Q  106 aataaaaataataattactattattttta---tcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  15950738 aataaaaataataattactattatttttatcatcattatcaagtatttaaaattaaataccgca 15950675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 44 - 166
Target Start/End: Original strand, 26779975 - 26780097
Alignment:
Q  44 aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatca 143  Q
    |||| ||||||||||||||||||||| | |||||| ||||||||||  ||| ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  26779975 aattgaattcttattcttatcacaaccatcataagttaaatttatgagaagagatattcacgaataaaaataataattactattgtttttatcattatca 26780074  T
Q  144 agtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||    
T  26780075 agtatttaaaattaaataccgca 26780097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 23547822 - 23547707
Alignment:
Q  50 attcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatt 149  Q
    |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  23547822 attcttattcttatcacaaccaccataaactaaatttatagaaa-tgatattcatgaataaaaacaataattactattatttttatcattatcaagtatt 23547724  T
Q  150 taaaattaaataccgca 166  Q
    |||||||||||||||||    
T  23547723 taaaattaaataccgca 23547707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 2966408 - 2966578
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaa------ttaaattcttattcttatcacaacgaccataagctaaatttatggaaagt 95  Q
    ||||||||||||| ||||||| ||||||||| ||| |||| |||      || ||||||||||||||| | ||| ||  |||| ||||||||| | ||||    
T  2966408 gaggaaacaaactcattggatatgaatgaaggaaagataaaaaaatttagttgaattcttattcttattagaaccactgtaaggtaaatttataggaagt 2966507  T
Q  96 gatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  2966508 gatattcacgaataaaaataataattactataatttttatcattattaagtatttaaaattaaataccgca 2966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 19168588 - 19168712
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacga--ccataagctaaatttatggaaagt 95  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||     |||||||||||||||||||||| |  ||||||||||||||||||| ||||    
T  19168588 gaggaaacaaactattagatttgaataaaggaaatataagaaattcaattaaattcttattcttatcacaaccatgccataagctaaatttatgggaagt 19168687  T
Q  96 gatattctcgaataaaaataataat 120  Q
    |||||||| ||||||||||||||||    
T  19168688 gatattctagaataaaaataataat 19168712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 22714223 - 22714109
Alignment:
Q  44 aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatca 143  Q
    |||| ||||||||||||||||||| | | |||||||||||||||||| ||||||||| |  |||||||||||||||||||||||| || ||||||||||     
T  22714223 aattgaattcttattcttatcacagccaacataagctaaatttatgggaagtgatatccatgaataaaaataataattactattacttgtatcattatct 22714124  T
Q  144 agtatttaaaattaa 158  Q
    |||||||| ||||||    
T  22714123 agtatttacaattaa 22714109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 17026746 - 17026833
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataaga--aattaaattcttattcttatcacaacgaccataagctaaatttat 88  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||| ||||||||||||||    
T  17026746 gaggaaacaaactattggatttgaatgaagaaaatataataataattaaattcttattcttatcacaaccaccttaagctaaatttat 17026833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 17557238 - 17557325
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataaga--aattaaattcttattcttatcacaacgaccataagctaaatttat 88  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||| ||||||||||||||    
T  17557238 gaggaaacaaactattggatttgaatgaagaaaatataataataattaaattcttattcttatcacaaccaccttaagctaaatttat 17557325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 28559280 - 28559219
Alignment:
Q  105 gaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28559280 gaataaaaataataattactattatttttatcattatcaaatatttaaaattaaataccgca 28559219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 28564459 - 28564400
Alignment:
Q  105 gaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccg 164  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28564459 gaataaaaataataattactattatttttatcattatcaaatatttaaaattaaataccg 28564400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 24672539 - 24672427
Alignment:
Q  49 aattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtat 148  Q
    ||||||||||||||| ||||| | ||||| ||| |||||| | ||||||||| | |||||||||||||| || | |||||||| ||||||||| ||||||    
T  24672539 aattcttattcttatgacaaccaacataaactacatttataggaagtgatatccacgaataaaaataatcataattattatttctatcattattaagtat 24672440  T
Q  149 ttaaaattaaata 161  Q
    ||| |||||||||    
T  24672439 ttacaattaaata 24672427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 1910004 - 1909946
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  1910004 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 1909946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 1808489 - 1808547
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  1808489 cacactatattttttcaattcacacaacattagatcaaagtataattacttggtgttta 1808547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 40124951 - 40124893
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  40124951 cacactctattttttcaattcacacaacattagatcaaagtatatttacttggtgttta 40124893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 15950629 - 15950582
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15950629 cacactctattttttcaattcacacaacattagatcaaagtataatta 15950582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 17021294 - 17021341
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17021294 cacactctattttttcaattcacacaacattagatcaaagtataatta 17021341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 17551731 - 17551778
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17551731 cacactctattttttcaattcacacaacattagatcaaagtataatta 17551778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 38181339 - 38181281
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  38181339 cacactttattttttcaattcacacaacattagatcaaagtataattacttgatgttta 38181281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 7002684 - 7002742
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||| | ||||||||||| |||||| ||||||||||    
T  7002684 cacactctattttttcaattcacacaatactagatcaaagtctaattacttggtgttta 7002742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 33100227 - 33100356
Alignment:
Q  7 aaacaaact-attggatttgaatgaagaaaatataagaaatta----aattcttattcttatcacaa-cgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||| ||||| | ||||||||||||| ||| |||| ||    |||||||||||||||||||| | |   |||| |||||||||||||| ||||||    
T  33100227 aaacaaactcattggttatgaatgaagaaaagataggaaactagttgaattcttattcttatcacaatcaaatgtaaggtaaatttatggaaaatgatat 33100326  T
Q  101 tctcgaataaaaataataattactattatt 130  Q
     |  ||||||||| ||||||||||||||||    
T  33100327 ccatgaataaaaaaaataattactattatt 33100356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 2966624 - 2966682
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||| || |||||||||| ||| |||||||||||| ||||||    
T  2966624 cacactctattttttcaattcccataacattagataaaaatataattatttgatgttta 2966682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 17953209 - 17953164
Alignment:
Q  160 taccgcacactctattttatcaattcacacaacattagatcaaagt 205  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||    
T  17953209 taccccacactctattttttcaattcacacaacactagatcaaagt 17953164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 28564348 - 28564297
Alignment:
Q  171 ctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||| |||||  |||||||||||||||||||||||| |||||||||||||    
T  28564348 ctattttttcaatgtacacaacattagatcaaagtataa-tatttggtgttta 28564297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 17797974 - 17798025
Alignment:
Q  92 aagtgatattctcgaataaaaat-aataattactattatttttatcattatc 142  Q
    ||||||||| | ||||||||||| |||||||||||||||||| |||||||||    
T  17797974 aagtgatatgcacgaataaaaattaataattactattattttaatcattatc 17798025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 44924975 - 44924932
Alignment:
Q  168 actctattttatcaattcacacaacattagatcaaagtataatt 211  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||    
T  44924975 actctaatttttcaattcacacaagattagatcaaagtataatt 44924932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 18875441 - 18875395
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    |||| ||||||| ||||||||||||||||||||||||| | ||||||    
T  18875441 acacactattttttcaattcacacaacattagatcaaaatttaatta 18875395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 28559173 - 28559116
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| || ||  |||||||||||||| ||||||||| |||||||||||||    
T  28559173 cacactctattttttccatgtacacaacattagattaaagtataa-tatttggtgttta 28559116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 17021181 - 17021229
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaattaaatt 52  Q
    |||||||||| || |||||||||||||||| |||||||||||||| ||||    
T  17021181 gaggaaacaa-cttttggatttgaatgaaggaaatataagaaatttaatt 17021229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 17551618 - 17551666
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaattaaatt 52  Q
    |||||||||| || |||||||||||||||| |||||||||||||| ||||    
T  17551618 gaggaaacaa-cttttggatttgaatgaaggaaatataagaaatttaatt 17551666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 17953351 - 17953251
Alignment:
Q  60 ttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaa 159  Q
    ||||| |||| | |||||| |||| ||||||| |||||||| |  ||||||||| || |||||   ||||||||||||| |||| | ||||||||| |||    
T  17953351 ttatcgcaacaaacataagataaaattatggagagtgatatccatgaataaaaaaaaaaatta---ttatttttatcataatcaggcatttaaaataaaa 17953255  T
Q  160 tacc 163  Q
    ||||    
T  17953254 tacc 17953251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 11533972 - 11533804
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11533972 gaggaaacaaactattggatttgaatgaagtaaatataagaaatttaattaaattcttattcttatcacaaccaccataagctaaatttatggaaagtga 11533873  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11533872 tattctcgaataaaaataataattacaattatttttatcattatcaagtatttaaaattaaataccgca 11533804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 11559482 - 11559314
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11559482 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataagctaaatttatggaaagtga 11559383  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11559382 tattctcgaataaaaataataattacaattatttttatcattatcaagtatttaaaattaaataccgca 11559314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 11569963 - 11569794
Alignment:
Q  3 gaggaaacaaa-ctattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||     |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  11569963 gaggaaacaaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttattcttttcacaacgaccataagctaaatttatggacagtg 11569864  T
Q  97 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11569863 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 11569794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 5856810 - 5856978
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  5856810 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataagctaaatttttgggaagtga 5856909  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5856910 tattctcgaataaaaataacaattactattatttttatcattatcaattatttaaaattaaataccgca 5856978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 6407127 - 6406966
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  6407127 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaaatgatat 6407028  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6407027 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 6406966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 16835430 - 16835268
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||| ||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  16835430 gaggtaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataaactaaatttatggaaagtgatat 16835331  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16835330 tctcaaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 16835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 17963825 - 17963664
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||    
T  17963825 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccgccataagctaaatttatgaaaagtgatat 17963726  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17963725 tctcgaat-aaaataacaattactattatttttatcattatcaagtatttaaaattaaatacc 17963664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 25313734 - 25313576
Alignment:
Q  15 tattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaata 109  Q
    ||||||||| |||||||||||||||||||||||     |||||||||||||||||||||| | |||||||||||||||| | ||||||||||||||||||    
T  25313734 tattggattagaatgaagaaaatataagaaattcaattaaattcttattcttatcacaactatcataagctaaatttataggaagtgatattctcgaata 25313635  T
Q  110 aaaataataattactattat--ttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  25313634 aaaataataattactattatttttttatcattatcaagtatttaaaattaaataccgca 25313576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 26201228 - 26201070
Alignment:
Q  15 tattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaata 109  Q
    ||||||||| |||||||||||||||||||||||     |||||||||||||||||||||| | |||||||||||||||| | ||||||||||||||||||    
T  26201228 tattggattagaatgaagaaaatataagaaattcaattaaattcttattcttatcacaactatcataagctaaatttataggaagtgatattctcgaata 26201129  T
Q  110 aaaataataattactattat--ttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  26201128 aaaataataattactattatttttttatcattatcaagtatttaaaattaaataccgca 26201070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 2699378 - 2699218
Alignment:
Q  11 aaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcg 105  Q
    |||||||| |||| |||||||||||||||||||||||     |||||||||||||||| ||||| |  ||||||||||||||||| ||||||||||||||    
T  2699378 aaactatttgattggaatgaagaaaatataagaaattcaattaaattcttattcttattacaactattataagctaaatttatgggaagtgatattctcg 2699279  T
Q  106 aataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  2699278 aataaaaataataattactattatttttattattatctagtatttaaaattaaataccgca 2699218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 20747568 - 20747400
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||     ||| |||||| |||||| |||||| ||||||||||||| ||||||    
T  20747568 gaggaaacaaactattgaatttgaatgaaggaaatataagaaattcaattaaatccttgttcttaccacaacaaccatatgctaaatttatgggaagtga 20747469  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  20747468 tattcacgaataaaaataataattactattgtttttatcgttatcaagtatttaaaattaaataccgca 20747400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 12405632 - 12405466
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||||| ||||||||||||||| | ||| |||||||||| ||||     ||||||||||||||||  |||||||||||||||||||| |||||    
T  12405632 gaggaaacaaactcattggatttgaatgatggaaagataagaaattcaattgaattcttattcttatcacaatcaccataagctaaatttatgggaagtg 12405533  T
Q  97 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12405532 atattcacgaataaaaataataattactattatttttatcattatcaagtatttaaaattaagtacc 12405466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 14509802 - 14509967
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||     |||||| |||||||||| |||| ||||||| |||||||||||  ||||||    
T  14509802 gaggaaacaaactattagatttgaatgatggaaatataagaaatttaattaaattcctattcttatcgcaaccaccataaactaaatttatgagaagtga 14509901  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  14509902 tattctcaaataaaaaaaataattactattatttttattattattaagtatttaaaattaaatacc 14509967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 19994662 - 19994487
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaattaaatt-----------cttattcttatcacaacgaccataagctaaatttatgg 90  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| ||||           ||||||||||||||||| || ||||||||||| | |||    
T  19994662 gaggaaacaaactcattggatttgaatgaaggaaatataagaaatttaattgaattcttattcttattcttatcacaaccactataagctaaatgtttgg 19994563  T
Q  91 aaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19994562 caagtgatattcacgaataaaaataataattactattatttttatcataatcaagtatttaaaattaaataccgca 19994487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 33686914 - 33686749
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaattaaattc-----ttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||| ||||||||||||  |||||||||||||| ||||      |||||||||||||||  ||| ||| |||||||||||||||||||    
T  33686914 gaggaaacaaactattagatttgaatgaatgaaatataagaaattcaatttaattattattcttatcacaatcaccctaaactaaatttatggaaagtga 33686815  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  33686814 tattattgaataaaaataataattactattatttttatcattaccaagtatttaaaactaaatacc 33686749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 11613175 - 11613008
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||||| |||| |||||||||||  ||| |||||||||| ||||     ||||||||||||||||| ||||||||||||||||||||||| ||    
T  11613175 gaggaaacaaactcattgaatttgaatgaatgaaagataagaaattcaattgaattcttattcttatcacaac-accataagctaaatttatggaaaatg 11613077  T
Q  97 atattctcgaataaaaataat-aattactattatttttatcattatcaagtatttaaaattaaataccg 164  Q
    |||||| ||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  11613076 atattcacgaataaaattaattaatcactattatttttatcattatcaagtatttaaaattaaataccg 11613008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 17914463 - 17914583
Alignment:
Q  44 aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatca 143  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||| ||||    
T  17914463 aattgaattcttattcttatcacaaccaccataacctaaatttatgggaagtgatattcacaaataaaaataataattgctattatttttatcatcatca 17914562  T
Q  144 agtatttaaaattaaataccg 164  Q
     ||||||||||||||||||||    
T  17914563 ggtatttaaaattaaataccg 17914583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 4156606 - 4156480
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||     |||||||||||||||| ||||| |||||||||||||||||| | ||||||    
T  4156606 gaggaaacaaactattggatttgaataaaggaaatataagaaatttaattaaattcttattcttattacaaccaccataagctaaatttatcggaagtga 4156507  T
Q  98 tattctcgaataaaaataataattact 124  Q
    |||||||||||||||||||||||||||    
T  4156506 tattctcgaataaaaataataattact 4156480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 8748589 - 8748708
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||||||||| |||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  8748589 gaggaaacaaactattgaatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatgaaaaatgatat 8748688  T
Q  101 tctcgaataaaaataataatt 121  Q
    |||| ||| ||||||||||||    
T  8748689 tctcaaat-aaaataataatt 8748708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 11428790 - 11428926
Alignment:
Q  3 gaggaaacaaactattggattt-gaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||| |||| ||||| |||||||| |||||||||||||| ||||     | |||| |||||||||| | |||||||||||||||||| |||||    
T  11428790 gaggaaacaaattatttgattttgaatgaaggaaatataagaaattcaattgaattcatatttttatcacaaccaacataagctaaatttatgggaagtg 11428889  T
Q  97 atattctcgaataaaaataataattactattattttt 133  Q
    |||||| |||||||||||||||||| |||||||||||    
T  11428890 atattcacgaataaaaataataatttctattattttt 11428926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 11569749 - 11569691
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11569749 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 11569691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 17600270 - 17600370
Alignment:
Q  65 acaacgaccataagctaaatttatggaaagtgatattctcg--aataaaaataataattactattatttttatcattatcaagtatttaaaattaaatac 162  Q
    ||||| |||||||||||||||||||| |||||||||||  |  || ||||||||  | |||| ||||||||||||||||||| |||||||||||||||||    
T  17600270 acaaccaccataagctaaatttatgggaagtgatattcatgctaaaaaaaataactactactgttatttttatcattatcaattatttaaaattaaatac 17600369  T
Q  163 c 163  Q
    |    
T  17600370 c 17600370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 22610449 - 22610501
Alignment:
Q  111 aaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22610449 aaataataattacaattatttttatcattatcaagtatttaaaattaaatacc 22610501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 6406917 - 6406859
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  6406917 cacactctattttttcaattcacacaacaatagatcaaagtataattacttggtgttta 6406859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 11428996 - 11429054
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  11428996 cacactctattttttcaattcacgcaacattagatcaaagtataattatctggtgttta 11429054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 17600416 - 17600474
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  17600416 cacactctattttttcaattcacacaacattagatcaaagtatgattacttggtgttta 17600474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 33686701 - 33686643
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  33686701 cacactctattttttcaattcacacaaaattagatcaaagtataattatttgatgttta 33686643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 22694641 - 22694518
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaattaaatt-----------cttattcttatcacaacgaccataagctaaatttatgg 90  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||| ||||           ||||||||||||||||| | |||||||||||| |||||    
T  22694641 gaggaaacaaactcattggatttgaatgaaggaaaaataagaaattcaattgaattcttattcttattcttatcacaaccatcataagctaaatatatgg 22694542  T
Q  91 aaagtgatattctcgaataaaaat 114  Q
     ||||||||||| |||||||||||    
T  22694541 taagtgatattcacgaataaaaat 22694518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 22694436 - 22694384
Alignment:
Q  171 ctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22694436 ctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 22694384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 11533759 - 11533701
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  11533759 cacactttattttttcaattcacacaacattagatcaaactataattacttggtgttta 11533701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 11559269 - 11559211
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  11559269 cacactgtattttttcaattcacacaacattagatcaaactataattacttggtgttta 11559211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 12690007 - 12690065
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||    
T  12690007 cacactctattttttcaattcacacaacactagatcaaagtttaataatttggtgttta 12690065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 12797839 - 12797781
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  12797839 cacactctattttttcaattcacacaacactagatcaaagtctaattacttggtgttta 12797781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 17963615 - 17963557
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||| ||||||||||    
T  17963615 cacactctattttttcaattcacacatcattagatcaaagtatagttacttggtgttta 17963557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 20747354 - 20747296
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||    
T  20747354 cacactctattttttcaattcacacaacattaaatcaaagtataattacttgatgttta 20747296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 19674657 - 19674761
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||| ||| | ||||| ||||| |||||| ||||||||| |  ||||||| |||||||||   ||||||||| |||||||| | ||||||||||||    
T  19674657 tcttatcaaaacaaacataacctaaaattatgggaagtgatatccatgaataaagaataataatatttattattttcatcattattaggtatttaaaatt 19674756  T
Q  157 aaata 161  Q
    |||||    
T  19674757 aaata 19674761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 16835219 - 16835160
Alignment:
Q  165 cacactctattttatc-aattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |  |||||||||||||||||||||||||||| ||| ||||||||||    
T  16835219 cacactctattttttttaattcacacaacattagatcaaagtatatttacttggtgttta 16835160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 19674826 - 19674869
Alignment:
Q  180 caattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  19674826 caattcacacaacactagatcaaagtttaattatttggtgttta 19674869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 12405417 - 12405359
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| | |||| |||||||||||||||||| |||||||| ||| ||||||    
T  12405417 cacactctatttttttaattaacacaacattagatcaaaatataattagttgatgttta 12405359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 12689859 - 12689961
Alignment:
Q  61 tatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaat 160  Q
    ||||||||| | ||||| ||||| |||||| ||||||||| |   |||||| |  ||||||| ||||||||| |||| |||||  |||||||||||||||    
T  12689859 tatcacaacaaacataacctaaaattatgggaagtgatatccataaataaaga--ataattattattattttcatcaatatcagttatttaaaattaaat 12689956  T
Q  161 accgc 165  Q
    |||||    
T  12689957 accgc 12689961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 25313533 - 25313487
Alignment:
Q  162 ccgcacactctattttatcaattcacacaacattagatcaaagtata 208  Q
    |||||||||||||||| |||||||| | ||||||| |||||||||||    
T  25313533 ccgcacactctattttttcaattcataaaacattatatcaaagtata 25313487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 26201027 - 26200981
Alignment:
Q  162 ccgcacactctattttatcaattcacacaacattagatcaaagtata 208  Q
    |||||||||||||||| |||||||| | ||||||| |||||||||||    
T  26201027 ccgcacactctattttttcaattcataaaacattatatcaaagtata 26200981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 2699154 - 2699113
Alignment:
Q  182 attcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||||||||| |||||||||||| ||| ||||||    
T  2699154 attcacacaacattagattaaagtataattacttgatgttta 2699113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 12797929 - 12797892
Alignment:
Q  126 ttatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||||||| || |||||||||||||||||||||||    
T  12797929 ttatttttatcgttgtcaagtatttaaaattaaatacc 12797892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 29892020 - 29891988
Alignment:
Q  125 attatttttatcattatcaagtatttaaaatta 157  Q
    ||||||||||||||||| |||||||||||||||    
T  29892020 attatttttatcattattaagtatttaaaatta 29891988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 25477562 - 25477392
Alignment:
Q  1 tagaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagt 95  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||     ||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  25477562 tagaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttattcttatcgcaaccaccataagctaaatttatagaaagt 25477463  T
Q  96 gatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25477462 gatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 25477392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 25496655 - 25496487
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  25496655 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataagttaaatttatagaaagtga 25496556  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25496555 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 25496487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 12797754 - 12797922
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||| ||||||||| | ||||||    
T  12797754 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataaggtaaatttataggaagtga 12797853  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12797854 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 12797922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 30651743 - 30651904
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  30651743 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 30651842  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30651843 tctcgaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 30651904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 1934258 - 1934097
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| |||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  1934258 gaggaaccaaactattggatttgaatgaagaaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 1934159  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1934158 tctctaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 1934097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 9179994 - 9179834
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  9179994 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatcgaaagtgatat 9179895  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9179894 tctcgaat-aaaataataattactattatttttatcattatcaagtattt-aaattaaatacc 9179834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 12361077 - 12361239
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12361077 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataagctaaatttatggaaagtga 12361176  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    || |||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12361177 tactctcgaataaa---aataattactattatttttatcattatcaattatttaaaattaaatacc 12361239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 17974618 - 17974456
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||| ||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  17974618 gaggaaacaaactattggttttgaatgaaggaaatataataataattaaattattattcttatcacaactaccataagctaaatttatggaaagtgatat 17974519  T
Q  101 tctcgaataaaaataataattactattatttttatcattatc-aagtatttaaaattaaatacc 163  Q
    |||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  17974518 tctcgaat-aaaataataattacaattatttttatcattatcaaagtatttaaaattaaatacc 17974456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 9184685 - 9184525
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||    
T  9184685 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatcgaaagtggtat 9184586  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9184585 tctcgaat-aaaataataattactattatttttatcattatcaagtattt-aaattaaatacc 9184525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 29678511 - 29678671
Alignment:
Q  11 aaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcg 105  Q
    |||||||| || |||||||||| ||||||||||||||     |||||||||||||||||||||| ||| |||||||||||||||| |||||||||| |||    
T  29678511 aaactattagagttgaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccgtaagctaaatttatgggaagtgatattttcg 29678610  T
Q  106 aataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29678611 aataaaaataataattactattatttttatcattatcaaatatttaaaattaaataccgca 29678671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 17968229 - 17968069
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||  | ||||||    
T  17968229 gaggaaacaaactattggatttgaatgaagaaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatgg--attgatat 17968132  T
Q  101 tctcgaataaaaataataattactattatttttatcattatc-aagtatttaaaattaaatacc 163  Q
    |||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17968131 tctcaaat-aaaataataattactattatttttatcattatcaaagtatttaaaattaaatacc 17968069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 18345236 - 18345406
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  18345236 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 18345335  T
Q  101 tctcgaataaaaataataattactatta---------tttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||| |||||||||||||||||||         ||||||||||||| |||||||||||||||||||||    
T  18345336 tctcaaat-aaaataataattactattattttttttttttttatcattattaagtatttaaaattaaatacc 18345406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 19891719 - 19891611
Alignment:
Q  54 ttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaa 153  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19891719 ttattcttatcagaaccaccataagctaaatttatggaaagtgatattctcgaataaaa-taataattactattatttttatcattatcaagtatttaaa 19891621  T
Q  154 attaaatacc 163  Q
    ||||||||||    
T  19891620 attaaatacc 19891611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 40846854 - 40846688
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||||| |||  |||||||||||| ||| |||||||||| ||||     ||||||||||||||||| | ||||| |||||||||| | |||||    
T  40846854 gaggaaacaaactcattaaatttgaatgaaggaaagataagaaattcaattgaattcttattcttatcacaaccatcataaactaaatttataggaagtg 40846755  T
Q  97 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  40846754 atattcacaaataaaaataaaaattactattatttttattattatcaagtatttaaaattaaatacc 40846688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 24537242 - 24537128
Alignment:
Q  50 attcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatt 149  Q
    |||| ||||||||||||||| || | ||| ||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24537242 attcatattcttatcacaaccactagaagttaaatgtatgggaaatgatattcacgaataaaaataataattactattatttttatcattatcaagtatt 24537143  T
Q  150 taaaattaaataccg 164  Q
    |||||||||||||||    
T  24537142 taaaattaaataccg 24537128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 12002125 - 12002030
Alignment:
Q  49 aattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaa 144  Q
    ||||||||||||||||||||  | |||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  12002125 aattcttattcttatcacaatcaacataagttaaatttatgggaagtgatatccacgaataaaaataataattactattatttttatcattatcaa 12002030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 25637984 - 25637866
Alignment:
Q  49 aattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctc-gaataaaaataataattactattatttttatcattatcaagta 147  Q
    |||| |||||||||||||||| | | ||| |||||||||||  ||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  25637984 aatttttattcttatcacaactaac-taaactaaatttatgagaagtgatatcctaagaataaaaataataattactattatttttatcattatcaagta 25637886  T
Q  148 ttt-aaaattaaataccgca 166  Q
    ||| ||||||||||||||||    
T  25637885 tttaaaaattaaataccgca 25637866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 34495325 - 34495213
Alignment:
Q  46 ttaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaag 145  Q
    |||||||||||||||||||||| | | |||||  ||||||| || |||||||||| | | ||    ||||||||| ||||||||||||||||||||||||    
T  34495325 ttaaattcttattcttatcacagccaacataaattaaatttttgaaaagtgatatccactaa----aataataatgactattatttttatcattatcaag 34495230  T
Q  146 tatttaaaattaaatac 162  Q
    |||||||||||||||||    
T  34495229 tatttaaaattaaatac 34495213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 12797969 - 12798027
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12797969 cacactctattttttcaattcacacaacattagatcaaagtataattatttggtgttta 12798027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 32080261 - 32080357
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaa 154  Q
    |||||||||||| | | ||||| ||| |||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  32080261 tcttatcacaaccaacgtaagcaaaaattatggaaagtggtatgcttgaataaaaaaaataattactattatttttatcattatcaggtacttaaaa 32080357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 12361284 - 12361342
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12361284 cacattctattttttcaattcacacaacattagatcaaagtataattatttggtgttta 12361342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 17974408 - 17974350
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  17974408 cacactctattttttcaattcacacaacattagatcaaagtataattatttgatgttta 17974350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 25496441 - 25496383
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  25496441 cacactctattttttcaattcacacaatattagatcaaagtataattatttggtgttta 25496383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 30651953 - 30652011
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  30651953 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 30652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 20101706 - 20101649
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  20101706 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 20101649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 1934064 - 1934008
Alignment:
Q  167 cactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  1934064 cactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 1934008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 28603970 - 28604074
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaa-taataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||| ||||| ||||| ||||| |||||| ||||||||| |  ||||||||| |||| |||| ||||||||| |||||||||| ||||||||||||    
T  28603970 tcttatcataacgaacataacctaaaattatgggaagtgatatccatgaataaaaaataattattattattattttcatcattatcatgtatttaaaatt 28604069  T
Q  157 aaata 161  Q
    |||||    
T  28604070 aaata 28604074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 18345455 - 18345513
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||    
T  18345455 cacactctatttttttaattcacacaacattagatcaaagtataattacttggtgttta 18345513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 20103329 - 20103259
Alignment:
Q  50 attcttattcttatcacaa-cgaccataagctaaatttatggaaagtgatattctcgaataaaaataataa 119  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||| | | ||||||||||||    
T  20103329 attcttattcttatcacaaaccaccataagctaaatttatggaaagtgatattcaccactaaaaataataa 20103259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 42925871 - 42925782
Alignment:
Q  73 cataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaattaaata 161  Q
    ||||| ||||| |||||| ||||||||| |  ||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  42925871 cataacctaaaattatgggaagtgatatccatgaataaataataataattattattattttcatcattatcaggtatttaaaattaaata 42925782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 17968021 - 17967963
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||||    
T  17968021 cacactctatttttttaattcacacaacattagatcaaagtataattacttgatgttta 17967963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 42925733 - 42925675
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  42925733 cacactctattttttcaattcacacaacactagatcaaagtttaattacttggtgttta 42925675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 9179774 - 9179725
Alignment:
Q  174 ttttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  9179774 ttttttcaattcacacaacattagatcaaagtataattacttggtgttta 9179725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 9184465 - 9184416
Alignment:
Q  174 ttttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  9184465 ttttttcaattcacacaacattagatcaaagtttaattatttggtgttta 9184416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 19891564 - 19891506
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||| |||||||| ||||||||||||| ||||||||||||||||||||  |||||||||    
T  19891564 cacattctattttttcaattcacacaagattagatcaaagtataattacatggtgttta 19891506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 25477346 - 25477288
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| | ||||| |||||||||| ||||||||||||||||||| ||||||    
T  25477346 cacactctatttttttaattcgcacaacattaaatcaaagtataattatttgatgttta 25477288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 28604120 - 28604182
Alignment:
Q  161 accgcacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| | |||||| ||||||||||    
T  28604120 accgcatactctattttttcaattcacacaacactagatcaaaatttaattacttggtgttta 28604182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 31329101 - 31329159
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||| | ||||||||||    
T  31329101 cacactctattttttcaattcacacaacactagatcaaagtttaataacttggtgttta 31329159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 31335822 - 31335880
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||| | ||||||||||    
T  31335822 cacactctattttttcaattcacacaacactagatcaaagtttaataacttggtgttta 31335880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 29678718 - 29678763
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataatt 211  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||    
T  29678718 acactctattttttcaattcacacaacattagatcaaaatataatt 29678763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 15446480 - 15446388
Alignment:
Q  73 cataagctaaatttatggaaagtgatattctcgaataaaaa-taataattactattatttttatcattatcaagtattt-aaaattaaatacc 163  Q
    ||||||||||| |||||  ||||||||| |  ||||||||| ||||||||| || || ||||| ||||||||||||||| |||||||||||||    
T  15446480 cataagctaaaattatgtgaagtgatatccatgaataaaaaataataattattactacttttaccattatcaagtatttaaaaattaaatacc 15446388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 19896903 - 19896943
Alignment:
Q  126 ttatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  19896903 ttatttttatcattatcaaatatttaaaattaaataccgca 19896943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 31328946 - 31329052
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | ||||| ||||| || ||  ||||||||| |  ||||||| ||||||||| |  || ||||| |||||||||| ||||||||||||    
T  31328946 tcttatcacaacaaacataacctaaaattgtgagaagtgatatccatgaataaagaataataataataataattttcatcattatcatgtatttaaaatt 31329045  T
Q  157 aaatacc 163  Q
    |||||||    
T  31329046 aaatacc 31329052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 31335667 - 31335773
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | ||||| ||||| || ||  ||||||||| |  ||||||| ||||||||| |  || ||||| |||||||||| ||||||||||||    
T  31335667 tcttatcacaacaaacataacctaaaattgtgagaagtgatatccatgaataaagaataataataataataattttcatcattatcatgtatttaaaatt 31335766  T
Q  157 aaatacc 163  Q
    |||||||    
T  31335767 aaatacc 31335773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 44630660 - 44630558
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | ||||| ||||| |||||  ||||||||| |  ||||||  ||||||||| |  |||||| |||||||||||| ||||||||||||    
T  44630660 tcttatcacaacaaacataacctaaaattatgagaagtgatatccatgaataaggaataataataataattattattatcattatcaggtatttaaaatt 44630561  T
Q  157 aaa 159  Q
    |||    
T  44630560 aaa 44630558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 7735433 - 7735497
Alignment:
Q  77 agctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatc 142  Q
    ||||||| ||||||||| |||||| | |||||||||| |||| |||||||||||||||| ||||||    
T  7735433 agctaaaattatggaaactgatatgcacgaataaaaaaaata-ttactattatttttattattatc 7735497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 19896991 - 19897034
Alignment:
Q  169 ctctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||    
T  19896991 ctctattttttcaattcacacaacattatatcaaaatataatta 19897034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 6154700 - 6154538
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6154700 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatgtaaagtgatat 6154601  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6154600 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 6154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 26668107 - 26668268
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  26668107 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 26668206  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26668207 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 26668268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 26939704 - 26939865
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  26939704 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 26939803  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26939804 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 26939865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 37537205 - 37537044
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||| |||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  37537205 gaggaaaaaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 37537106  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37537105 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 37537044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 37646324 - 37646163
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||| |||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  37646324 gaggaaaaaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 37646225  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37646224 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 37646163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 12103879 - 12104047
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     |||||||||| ||||||||| | |||||||||||||||||||  ||||||    
T  12103879 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttatacttatcacacccaccataagctaaatttatgagaagtga 12103978  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12103979 tattctcgaataaaaataataactactattatttttatcattatcaagtatttaaaattaaataccgca 12104047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 37248067 - 37247905
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||| ||||||||||||||||||||||||  |||||||| ||  |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  37248067 gaggtaacaaactattggatttgaatgaatgaaatataataataattaaattattattcttatcacaaccaccataaactaaatttatggaaagtgatat 37247968  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37247967 tctcaaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 37247905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 39519224 - 39519385
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| ||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  39519224 gaggaaccaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaactaccataagctaaatttatggaaagtgatat 39519323  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39519324 tctcgaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 39519385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 39523863 - 39524024
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| ||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  39523863 gaggaaccaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaactaccataagctaaatttatggaaagtgatat 39523962  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39523963 tctcgaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 39524024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 36424467 - 36424628
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36424467 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatgtaaagtgatat 36424566  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  36424567 tctcgaat-aaattaataattaatattatttttatcattaccaagtatttaaaattaaatacc 36424628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 20180421 - 20180258
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||     |||||||||||||||||||||| |||||||||||||||||| | ||||||    
T  20180421 gaggaaacaaactattgaatttgaacgaaggaaatataagaaattcaattaaattcttattcttatcacaaccaccataagctaaatttataggaagtga 20180322  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccg 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  20180321 tattctcgaataaaaataataattactattatttttatcattatca---atttaaaattaaataccg 20180258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 29167240 - 29167079
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||| |||||||||||||||||  |||||||| ||  |||||| | ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  29167240 gaggaaacaaaatattggatttgaatgaatgaaatataataataattaaagtattattcttatctcaaccaccataagctaaatttatggaaagtgatat 29167141  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29167140 tctcgaat-aaaataataattactattgtttttatcattatcaagtatttaaaattaaatacc 29167079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 7452582 - 7452745
Alignment:
Q  3 gaggaaac-aaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgata 99  Q
    |||||||| |||||||||||||||||||||  |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||| | |||    
T  7452582 gaggaaactaaactattggatttgaatgaatgaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaaataata 7452681  T
Q  100 ttctcgaataaaaataataattactatt-atttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7452682 ttctcgaat-aaaataataattactattaatttttatcattatcaagtatttaaaattaaatacc 7452745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 6511900 - 6511740
Alignment:
Q  6 gaaacaaactattggatttgaatgaagaaaatataaga-----aattaaattcttattcttatcacaacgaccata---agctaaatttatggaaagtga 97  Q
    ||||||||||||||||||||||||||  |||||||| |     |||||||||||||||||||||||||| ||||||   |||||||||||| | ||||||    
T  6511900 gaaacaaactattggatttgaatgaatgaaatataaaaaatttaattaaattcttattcttatcacaaccaccataagcagctaaatttataggaagtga 6511801  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaa 158  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6511800 tattctcaaataaaaataataattactattatttttatcattatcaagtatttaaaattaa 6511740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 36430348 - 36430508
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||| ||||||||||||||||||  |||||||| ||  |||| ||| |||||||||||||||| | ||||| ||||||||||| ||||||||||    
T  36430348 gaggaaacaa-ctattggatttgaatgaatgaaatataataataattatattattattcttatcacaaccaacataaactaaatttatgaaaagtgatat 36430446  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  36430447 tctcgaat-aaattaataattactattatttttatcattaccaaatatttaaaattaaatacc 36430508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 40148725 - 40148798
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaattaaattcttattcttatcacaacgaccata 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40148725 gaggaaacaaactattggatttgaatgaagaaaatataagaaattaaattcttattcttatcacaacgaccata 40148798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 10759531 - 10759468
Alignment:
Q  99 attctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatac 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10759531 attctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatac 10759468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 26668317 - 26668375
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26668317 cacactctattttttcaattcacacaacattagatcaaagtataattatttggtgttta 26668375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 26939914 - 26939972
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26939914 cacactctattttttcaattcacacaacattagatcaaagtataattatttggtgttta 26939972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 16115451 - 16115334
Alignment:
Q  46 ttaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaag 145  Q
    |||||||||| || |||||||||| | | |||||||||||||||| ||||||||| | |||||| |||||| ||| ||| ||| ||| ||||||| ||||    
T  16115451 ttaaattcttgtttttatcacaaccaacgtaagctaaatttatgggaagtgatatccacgaatataaataacaatgactttta-tttcatcattagcaag 16115353  T
Q  146 tatttaaaattaaataccg 164  Q
    |||||||||||||| ||||    
T  16115352 tatttaaaattaaacaccg 16115334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 17162769 - 17162847
Alignment:
Q  86 tatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtattt-aaaattaaatacc 163  Q
    ||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||||    
T  17162769 tatggaaagtgatatccttgaataaaaaaaatcattactattatttttatcattatcaggtatttaaaaattaaatacc 17162847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 37247856 - 37247798
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  37247856 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 37247798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 39524063 - 39524121
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  39524063 cacactctattttttcaattcacacaacattagatcaaagtatatttatttggtgttta 39524121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 29167030 - 29166972
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  29167030 cacactctattttttcaattcacacaacattaaatcaaagtataattacttggtgttta 29166972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 36424677 - 36424735
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  36424677 cacactctattttttcaattcacacaacattagatcatagtataattacttggtgttta 36424735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 37646112 - 37646054
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  37646112 cacactctattttttcaattcacacaacattagatcaaagtataattacttgatgttta 37646054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 39519424 - 39519482
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  39519424 cacactctattttttcaattcacacaacattagatcaaagtatatttacttggtgttta 39519482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 17159288 - 17159367
Alignment:
Q  86 tatggaaagtgatattctcgaataaaaa-taataattactattatttttatcattatcaagtattt-aaaattaaatacc 163  Q
    |||||||| |||||| || ||||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||||||    
T  17159288 tatggaaattgatatccttgaataaaaaataatcattactattatttttatcattatcaggtatttaaaaattaaatacc 17159367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 6154489 - 6154431
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||    
T  6154489 cacactctattttttcaattcacacaacattagatcaaaatataattacttgatgttta 6154431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 7452794 - 7452852
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| || |||||||    
T  7452794 cacactctattttttcaattcacacaacattagatcagagtataattactttgtgttta 7452852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 23757221 - 23757163
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||    
T  23757221 cacactctattttttcaattcacacaacattaaatctaagtataattacttggtgttta 23757163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 23822677 - 23822619
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||    
T  23822677 cacactctattttttcaattcacacaacattaaatctaagtataattacttggtgttta 23822619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 35679118 - 35679004
Alignment:
Q  50 attcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaa-taataattactattatttttatcattatcaagtat 148  Q
    ||||||| |||||||||||| | ||||| ||||| |||||| |||| |||| |  ||||||||| ||||||| | ||||||||  |||||||||| ||||    
T  35679118 attcttaatcttatcacaacaaacataacctaaaattatgggaagtaatatccatgaataaaaaataataataattattatttgcatcattatcaggtat 35679019  T
Q  149 ttaaaattaaatacc 163  Q
    ||||||| |||||||    
T  35679018 ttaaaataaaatacc 35679004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 37536994 - 37536936
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||    
T  37536994 cacactctattttttcaattcacacaacattatatcaaagtataattacttgatgttta 37536936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 22832732 - 22832636
Alignment:
Q  56 attcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaat-aaaaataataattactattatttttatcattatcaagtatttaa 152  Q
    |||||||||||||  | ||||| |||||  ||||||||||||||  |  |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  22832732 attcttatcacaaacaacataaactaaaactatggaaagtgata-ccatgaataaaaaataataattactattatttttaacattatcaagtatttaa 22832636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 40150243 - 40150292
Alignment:
Q  174 ttttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  40150243 ttttttcaattcacacaacattagatcaaagtataattacttggtgttta 40150292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 20180206 - 20180154
Alignment:
Q  171 ctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  20180206 ctattttctcaattcacacaacattagattaaagtataattacttggtgttta 20180154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 40148797 - 40148836
Alignment:
Q  127 tatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40148797 tatttttatcattatcaagtatttaaaattaaataccgca 40148836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 4872921 - 4872979
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| || |||||||| |||| ||||||||||||    
T  4872921 cacactctattttttcaattcacacaacactaaatcaaagtttaataatttggtgttta 4872979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 35678954 - 35678897
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||| ||| ||||||    
T  35678954 acactctattttttcaattcacacaacactagatcaaagtttaattacttgatgttta 35678897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 23689009 - 23689061
Alignment:
Q  111 aaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||||||||||||||||||| |||||| | |||||||||||||||||||    
T  23689009 aaattataattactattatttttaccattataaggtatttaaaattaaatacc 23689061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 36430557 - 36430604
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  36430557 cacactctattttttcaattcacacaacattagattaaaatataatta 36430604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 15149601 - 15149635
Alignment:
Q  109 aaaaataataattactattatttttatcattatca 143  Q
    |||||||||||||||||||||||||||||||||||    
T  15149601 aaaaataataattactattatttttatcattatca 15149635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 40567754 - 40567708
Alignment:
Q  117 taattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||||    
T  40567754 taattactattatttttatcattataagatatttaaaattaaatacc 40567708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 4872771 - 4872870
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | ||||| ||||| ||||||  |||||||| |  ||||||| ||||||||||| ||||||||| ||||||     ||||||||||||    
T  4872771 tcttatcacaacaaacataacctaaagttatggggagtgatatccatgaataaagaataataattattattattttcatcatt-----gtatttaaaatt 4872865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 12104105 - 12104141
Alignment:
Q  186 acacaacattagatcaaagtataattatttggtgttt 222  Q
    ||||||||||||||||||||||||||| |||||||||    
T  12104105 acacaacattagatcaaagtataattacttggtgttt 12104141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 15413912 - 15413861
Alignment:
Q  49 aattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||||||||||||| | | |||| ||||||||||| |||||||||    
T  15413912 aattcttattcttatcacaaccaacgtaagttaaatttatgggaagtgatat 15413861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 2847842 - 2847801
Alignment:
Q  112 aataataattactattatttttatcattatcaagtatttaaaa 154  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  2847842 aataataattactattatttt-atcaatatcaagtatttaaaa 2847801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 2859679 - 2859638
Alignment:
Q  112 aataataattactattatttttatcattatcaagtatttaaaa 154  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  2859679 aataataattactattatttt-atcaatatcaagtatttaaaa 2859638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 6511652 - 6511614
Alignment:
Q  173 attttatcaattcacacaacattagatcaaagtataatt 211  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  6511652 attttttcaattcacacaacattagatcaaaatataatt 6511614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 9725978 - 9725873
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaa-taataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||  | ||||| ||||| ||||| ||||||||||  | ||||||||| | || |||| |||||| || |||||||||  ||||||||||||    
T  9725978 tcttatcacaataaacataacctaaaattatgaaaagtgatatcat-gaataaaaaattattattattattatcttcatcattatccggtatttaaaatt 9725880  T
Q  157 aaatacc 163  Q
    |||||||    
T  9725879 aaatacc 9725873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 10759417 - 10759371
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    |||||||||||| | |||||||||||||||| |||||| ||||||||    
T  10759417 acactctatttttttaattcacacaacattaaatcaaaatataatta 10759371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 10136154 - 10136315
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  10136154 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 10136253  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10136254 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 10136315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 51040788 - 51040629
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  51040788 gaggaaacaaactattggatttgaatgaagaaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaaatgatat 51040689  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaata 161  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51040688 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaata 51040629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 16648901 - 16648733
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     ||||| |||||||||||||||| ||| |||| ||||||||||||||||||    
T  16648901 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttagttaaatttttattcttatcacaaccaccgtaagttaaatttatggaaagtga 16648802  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648801 tattatcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 16648733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 19798268 - 19798098
Alignment:
Q  1 tagaggaaacaaactattggatttgaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagt 95  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||||||     ||||||||||||||||| |||||||||||||||||||| ||||    
T  19798268 tagaggaaacaaaatattagatttgaatgaaggaaatataagaaattaaattaaattcttattcttatcacaaccaccataagctaaatttatgggaagt 19798169  T
Q  96 gatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19798168 gatattctcaaataaaaataattattactattatttttatcattatcaagtatttaaaattaaataccgca 19798098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 25844585 - 25844746
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| |||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  25844585 gaggaaccaaactattggatttgaatgaagaaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 25844684  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25844685 tctctaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 25844746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 26926987 - 26926825
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  26926987 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatgaaaagtgatat 26926888  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtattt-aaaattaaatacc 163  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26926887 gctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaaattaaatacc 26926825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 10140922 - 10141083
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||| |||||||||||||| |||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||| |||||||||||| |||||||||    
T  10140922 gaggtaacaaactattggacttgaatgaaggaaatataataataattaaattattattcttatcacaactaccataaactaaatttatgggaagtgatat 10141021  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10141022 tctcgaataaaa-taataattactattatttttatcattatcaagtatttaaaattaaatacc 10141083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 33300529 - 33300379
Alignment:
Q  6 gaaacaaactattggatttgaatgaagaaaatataaga-----aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||| |||| ||||||||||||| |||||||| |     |||||||||||||||||||||||||  || ||||||||||||||||  || ||||||    
T  33300529 gaaacaaattattagatttgaatgaagtaaatataaaaaattcaattaaattcttattcttatcacaaacacgataagctaaatttatgagaattgatat 33300430  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtattta 151  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33300429 tcacgaataaaaataataattactattatttttatcattatcaagtattta 33300379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 11807100 - 11807209
Alignment:
Q  54 ttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaa 153  Q
    |||||||||||||||| |||||||||||||||||||| || ||||||||  |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  11807100 ttattcttatcacaaccaccataagctaaatttatgggaaatgatattccggaataaaaataataattaatattgtttttatcattatcaagtatttaaa 11807199  T
Q  154 attaaatacc 163  Q
     |||||||||    
T  11807200 tttaaatacc 11807209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 38621537 - 38621661
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||||||||||||||| |||| |||||||| || ||     |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  38621537 gaggaaacaaactattggatttgaacgaaggaaatataaaaacttcaatcaaattcttattcttatcacaaccaccataagctaaatttatgggaagtga 38621636  T
Q  98 tattctcgaataaaaataataatta 122  Q
    ||||||| |||||||||||||||||    
T  38621637 tattctcaaataaaaataataatta 38621661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 47450375 - 47450296
Alignment:
Q  87 atggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  47450375 atggaaagtgatattctcgaataaaaataataataattattatttttatcattatcaagtatttaaaattaaataacgca 47450296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 12260860 - 12260966
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaa-ataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | ||||||||||| |||||  ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12260860 tcttatcacaaccaacataagctaaaattatgagaagtgatatccatgaataaaaaataataattactattatttttatcattatcaagtatttaaaatt 12260959  T
Q  157 aaatacc 163  Q
    |||||||    
T  12260960 aaatacc 12260966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 8138510 - 8138593
Alignment:
Q  50 attcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattattttt 133  Q
    |||||||||||||| || || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  8138510 attcttattcttattacgaccaccataagctaaatttatgggaagtgatattcacgaataaaaataataattactattattttt 8138593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 39200028 - 39199924
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||     ||||||||||||| |||||| | ||||||||| |||||||||| ||||||    
T  39200028 gaggaaacaaactatttgatttgaatgaaggaaatataagaaatttaattaaattcttattctaatcacagctaccataagccaaatttatgggaagtga 39199929  T
Q  98 tattc 102  Q
    |||||    
T  39199928 tattc 39199924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 16036490 - 16036596
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | ||||| ||||| ||||||||||||||||||  ||||||| ||||||||| | ||||||||| |||||||||| ||||||||| ||    
T  16036490 tcttatcacaacaaacataacctaaaattatggaaagtgatattcatgaataaagaataataataattattattttcatcattatcaggtatttaaattt 16036589  T
Q  157 aaatacc 163  Q
    |||||||    
T  16036590 aaatacc 16036596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 39586290 - 39586186
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | |||||  |||| || ||| |||||||||||  ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||    
T  39586290 tcttatcacaacaaacataacttaaaattgtgggaagtgatattcatgaataaagaataataattattattatttttatcattatcaggtatttaaaatt 39586191  T
Q  157 aaata 161  Q
    |||||    
T  39586190 aaata 39586186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 10136364 - 10136422
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  10136364 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 10136422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 25844795 - 25844853
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  25844795 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 25844853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 46697220 - 46697315
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaa-ataataattactattatttttatcattatcaagtatttaaa 153  Q
    |||||||||||| | ||||| ||||| | |||| |||||||||||  || ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  46697220 tcttatcacaacaaacataa-ctaaaataatgggaagtgatattcatgagtaaaaaataataattactattatttttatcattttcaagtatttaaa 46697315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 51040578 - 51040522
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgtt 221  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  51040578 cacactttattttttcaattcacacaacattagatcaaagtataattacttggtgtt 51040522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 38622228 - 38622275
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38622228 cacactctattttttcaattcacacaacattagatcaaagtataatta 38622275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 23191994 - 23191943
Alignment:
Q  112 aataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  23191994 aataataataattattatttttatcattatcaggtatttaaaattaaatacc 23191943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 16036645 - 16036703
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| ||||||||||| || ||| ||||||||||    
T  16036645 cacactctattttttcaattcacacaacactagatcaaagtttagttacttggtgttta 16036703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 16648685 - 16648639
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||    
T  16648685 acactctattttttcaatttacacaacattagatcaaagtataatta 16648639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 23191896 - 23191838
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||| | ||||||||||    
T  23191896 cacactctattttttcaattcacacaacactagatcaaagtttaataacttggtgttta 23191838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 47450490 - 47450448
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaa 45  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  47450490 gaggaaacaaactattggatttgaatgaaggaaatataagaaa 47450448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 26926772 - 26926728
Alignment:
Q  179 tcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  26926772 tcaattcacacaacattaaatcaaagtataattagttggtgttta 26926728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16834302 - 16834353
Alignment:
Q  1 tagaggaaacaaactattggatttgaatgaagaaaatataagaaattaaatt 52  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||| ||||    
T  16834302 tagaggaaacaaactattggatttaaataaaggaaatataagaaattcaatt 16834353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 38622135 - 38622178
Alignment:
Q  119 attactattatttttatcattatcaagtatttaaaattaaatac 162  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||    
T  38622135 attactattatttttatcattatcaagtattcaaaatcaaatac 38622178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 40166891 - 40166930
Alignment:
Q  124 tattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  40166891 tattatttttatcattatcaggtatttaaaattaaatacc 40166930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 8138634 - 8138678
Alignment:
Q  168 actctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||    
T  8138634 actctattttttcaattcacacaatattatatcaaagtataatta 8138678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 39199917 - 39199878
Alignment:
Q  123 ctattatttttatcattatcaagtatttaaaattaaatac 162  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  39199917 ctattatttttatcattattaagtatttaaaagtaaatac 39199878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 19798041 - 19797993
Alignment:
Q  174 ttttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||| ||||    
T  19798041 ttttttcaattcacacaacattagatcaaa-tataattacttggtattta 19797993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 40166984 - 40167037
Alignment:
Q  170 tctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||| ||||||||||||| | ||||||||||| |||| | ||||||||||    
T  40166984 tctattttttcaattcacacaatactagatcaaagtttaataacttggtgttta 40167037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 46697355 - 46697399
Alignment:
Q  168 actctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    |||||||||| ||||||||||||||| || |||||||| ||||||    
T  46697355 actctattttttcaattcacacaacactaaatcaaagtctaatta 46697399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 26342036 - 26342195
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  26342036 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 26342135  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaata 161  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26342136 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaata 26342195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 8269125 - 8269293
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     |||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  8269125 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttatccttatcacaaccaccataagttaaatttatggaaagtga 8269224  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8269225 tattcacgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatatcgca 8269293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 42625854 - 42625685
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||| |||||||||||| | ||||||| ||||||||||||||     |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  42625854 gaggaaataaactattggatgtaaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataagttaaatttatggaaagtga 42625755  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgcac 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42625754 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatactgcac 42625685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 12256846 - 12257012
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||| ||||     | ||||||||||||||| |||||||||||||||||||| |||||    
T  12256846 gaggaaacaaactcattggatttgaatgaaggaaaaataagaaattcaattgaattcctattcttatcacaaccaccataagctaaatttatgggaagtg 12256945  T
Q  97 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12256946 atattcacgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 12257012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 3880793 - 3880956
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||     ||||| |||||||||||||||| | |||||||||||||||||| ||||||    
T  3880793 gaggaaacaaactattgaatttgaatgaatgaaatataagaaattcaattaaattattattcttatcacaacaatcataagctaaatttatgggaagtga 3880892  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaata 161  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3880893 tattcacaaataaaaataataattactattatttttatcattatcaagtatttaaaattaaata 3880956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 12800216 - 12800379
Alignment:
Q  4 aggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgat 98  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||     |||||||||||||||| ||||| || |||| ||||||||||||||||| ||    
T  12800216 aggaaacaaactattagatttgaatgaaggaaatttaagaaattcaataaaattcttattcttattacaaccactataacctaaatttatggaaagttat 12800315  T
Q  99 attctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatac 162  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12800316 attttcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatac 12800379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 4931052 - 4931213
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||| ||||||||||||||||||||||||  |||||||| ||  |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  4931052 gaggtaacaaactattggatttgaatgaatgaaatataataataattaaattattattcttatcacaaccaccataaactaaatttatggaaagtgatat 4931151  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||  |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4931152 tctcagataaaa-taataattactattatttttatcactatcaagtatttaaaattaaatacc 4931213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 3046398 - 3046567
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataaga-----aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||||| ||| ||||||||||||| ||| ||||||     |||| ||||||||||||||||||||| |||||||| ||||||||| | |||||    
T  3046398 gaggaaacaaactcattagatttgaatgaaggaaagataagacattcaattgaattcttattcttatcacaaccaccataagttaaatttataggaagtg 3046497  T
Q  97 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||| ||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||||||    
T  3046498 atattcacgaataaaaattatagtaattattatttttatcattatcaagtatttaaaattaaataccgca 3046567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 21672083 - 21672198
Alignment:
Q  50 attcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatt 149  Q
    |||||||||||||||||||| |||||||| |||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  21672083 attcttattcttatcacaaccaccataaggtaaatt-atgggaagtgatattcacgaataaaaataataattactattatttttatcattatcaagtata 21672181  T
Q  150 taaaattaaataccgca 166  Q
    |||||||||||||||||    
T  21672182 taaaattaaataccgca 21672198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 10392362 - 10392192
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||| ||||     ||||||||||||||||  ||||||| |||||||||||| |||||    
T  10392362 gaggaaacaaactcattggatttgaatgaaggaaagataagaaattcaattgaattcttattcttatcacaatcaccataacctaaatttatgggaagtg 10392263  T
Q  97 atattctcgaataaaaataataattac-tattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||  ||||||||||||||||||| | || ||||||| ||||||||||||||||||||||||||||||    
T  10392262 atattcatgaataaaaataataattacattttttttttattattatcaagtatttaaaattaaataccgca 10392192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 27238980 - 27239114
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||     ||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  27238980 gaggaaacaaactattgaatttgaatgaatgaaatataagaaattcaattaaattcttattgttatcacaacaaccataagctaaatttatgggaagtga 27239079  T
Q  98 tattctcgaataaaaataataattactattatttt 132  Q
    ||||| |||||||||||||||||||||||||||||    
T  27239080 tattcacgaataaaaataataattactattatttt 27239114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 12181974 - 12181855
Alignment:
Q  50 attcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataatta---ctattatttttatcattatcaagt 146  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||| ||| ||||   ||||||||||||||||||||||||    
T  12181974 attcttattcttatcacaaccaccataagctaaatttattggaagtgatattcacgaataaaaaaaatgattattactattatttttatcattatcaagt 12181875  T
Q  147 atttaaaattaaataccgca 166  Q
    ||||||||||||||||||||    
T  12181874 atttaaaattaaataccgca 12181855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 10387623 - 10387456
Alignment:
Q  3 gaggaaacaaacta-ttggatttgaatgaagaaaatataagaaattaaatt-----cttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    |||||||||||||  |||||||||||||||||||| |||||||||| ||||     ||||||||||||||||| |||||||||||||||||||| |||||    
T  10387623 gaggaaacaaactcgttggatttgaatgaagaaaagataagaaattcaattgaattcttattcttatcacaacaaccataagctaaatttatgggaagtg 10387524  T
Q  97 atattctcg-aataaaaataataattactattatt-tttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||| || || |||||||||||  |||||| || |||||||||||||| ||||||||||||||||||    
T  10387523 atattcacgaaaaaaaaataataa-aactatttttctttatcattatcaaatatttaaaattaaatacc 10387456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 2595652 - 2595867
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||     |||||||| ||||||||||| | |||||||||||| ||||||| ||||||    
T  2595652 gaggaaacaa-ctattagatttgaatgaagaaaatataagaaattcaattaaattctttttcttatcacagccaccataagctaagtttatgggaagtga 2595750  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgcacactctattttatcaattcacacaacattag 197  Q
    |||||||||||||||| ||||||||||| | | | | |     ||   ||||| |  |   ||||| ||||||||||||| |||||||||||||||||||    
T  2595751 tattctcgaataaaaagaataattactaatgtgtgtgt-----tc---tattttatgtgggatacc-cacactctattttttcaattcacacaacattag 2595841  T
Q  198 atcaaagtataattatttggtgttta 223  Q
    || ||||| |||||||||||||||||    
T  2595842 attaaagtgtaattatttggtgttta 2595867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 23152293 - 23152177
Alignment:
Q  44 aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatca 143  Q
    |||||||||||||||||||||| ||  | ||||| ||||||||||||||| ||||||||  | |||||||||||||| | ||||||||||||||||||||    
T  23152293 aattaaattcttattcttatcataatcatcataaactaaatttatggaaaatgatattcatggataaaaataataataattattatttttatcattatca 23152194  T
Q  144 agtatttaaaattaaat 160  Q
    ||| |||||||||||||    
T  23152193 agtttttaaaattaaat 23152177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 6590236 - 6590121
Alignment:
Q  46 ttaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaag 145  Q
    ||||||| |||||||||||||||| |  |||| |||||||||||| || |||||| | ||||||||||||||||| ||||||||||||| | ||||||||    
T  6590236 ttaaatttttattcttatcacaacaaatataaactaaatttatgggaaatgatatccacgaataaaaataataatgactattatttttagctttatcaag 6590137  T
Q  146 tatttaaaattaaata 161  Q
    ||||||||||||||||    
T  6590136 tatttaaaattaaata 6590121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 23248011 - 23247877
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataaga-----aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||||||| ||||||| |||  |||||||| |     ||||||||| |||||||||||||||  |||||||||| ||||||||| ||||||    
T  23248011 gaggaaacaaactattgaatttgaacgaatgaaatataaaaaattcaattaaatttttattcttatcacaatcaccataagctcaatttatgggaagtga 23247912  T
Q  98 tattctcgaataaaaataataattactattatttt 132  Q
    ||||  |||||||||||||||||||||||||||||    
T  23247911 tatttacgaataaaaataataattactattatttt 23247877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 44509674 - 44509585
Alignment:
Q  44 aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattattttta 134  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  44509674 aattaaattattattcttatcacaaccaccgtaagctaaatttatggaaagtgatattctcaaat-aaaataataattactattattttta 44509585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 9815091 - 9814978
Alignment:
Q  54 ttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtattt-aa 152  Q
    |||||||||||||||| | | |||||||||||||||  ||||||||||   |||||||||||||||||||||||||||| || |||||||||||||| ||    
T  9815091 ttattcttatcacaaccaacgtaagctaaatttatgagaagtgatattgatgaataaaaataataattactattattttcattattatcaagtatttaaa 9814992  T
Q  153 aattaaataccgca 166  Q
    ||||||||||||||    
T  9814991 aattaaataccgca 9814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 10717016 - 10716903
Alignment:
Q  54 ttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtattt-aa 152  Q
    |||||||||||||||| | | |||||||||||||||  ||||||||||   |||||||||||||||||||||||||||| || |||||||||||||| ||    
T  10717016 ttattcttatcacaaccaacgtaagctaaatttatgagaagtgatattgatgaataaaaataataattactattattttcattattatcaagtatttaaa 10716917  T
Q  153 aattaaataccgca 166  Q
    ||||||||||||||    
T  10716916 aattaaataccgca 10716903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 16373248 - 16373333
Alignment:
Q  73 cataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaa 158  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  16373248 cataagctaaatttatggaaagtgatatacacgaataaaaataataatgactattatttttatcgttatcaggtatttaaaattaa 16373333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 27246818 - 27246664
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||||| ||||||| ||||||||  ||| ||| ||||||     ||||||||||| ||||| |||| | |||||||||||||||||  |||||    
T  27246818 gaggaaacaaacttattggatatgaatgaaagaaagataggaaattcgcttaaattcttatttttatcgcaaccaacataagctaaatttatgagaagtg 27246719  T
Q  97 atattctcgaataaaaataataattactattatttttatcattatcaagtattta 151  Q
    |||| | ||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  27246718 atatccacgaataaaaataataatgattattagttttatcattatcaagtattta 27246664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 4931262 - 4931320
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  4931262 cacactctattttttcaattcacacaacattatatcaaagtataattacttggtgttta 4931320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 12802321 - 12802379
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  12802321 cacactctattttttcaattcacacaacattagattaaagtataattacttggtgttta 12802379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 42625635 - 42625577
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  42625635 cacactctattttttcaattcacataacattagatcaaagtataattacttggtgttta 42625577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 23247615 - 23247558
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  23247615 acactctattttttcaattcacataacattagatcaaagtataattacttggtgttta 23247558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 30258956 - 30259065
Alignment:
Q  49 aattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagta 147  Q
    |||||| | |||||||||||| | ||||| ||||| |||||| ||||||||| |  ||||||| |||||| |||| ||||||||| |||||||||| |||    
T  30258956 aattctcaatcttatcacaacaaacataatctaaaattatgggaagtgatatccatgaataaacaataattattattattattttcatcattatcaggta 30259055  T
Q  148 tttaaaatta 157  Q
    ||||||||||    
T  30259056 tttaaaatta 30259065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 13313527 - 13313420
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataa--taattactattatttttatcattatcaagtatttaaaat 155  Q
    |||||||||||| | ||||| ||||| |||||  ||||||||| |  ||||||||| ||  |||||  ||||||||| ||||||||||||||||||||||    
T  13313527 tcttatcacaaccaacataaactaaaattatgtgaagtgatatccatgaataaaaaaaaaataattgttattattttcatcattatcaagtatttaaaat 13313428  T
Q  156 taaatacc 163  Q
    ||||||||    
T  13313427 taaatacc 13313420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 21672243 - 21672302
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgtttat 224  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  21672243 cacattctattttttcaattcacacaacgttagatcaaagtataattacttggtgtttat 21672302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 12257060 - 12257114
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtg 219  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  12257060 cacactctattttttcaatttacacaacattaaatcaaagtataattatttggtg 12257114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 23151743 - 23151685
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  23151743 cacactttattttttcaattcacacaacattagatcaaagtataattacttgatgttta 23151685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 44508353 - 44508306
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  44508353 cacactctattttttcaattcacacaatattagatcaaagtataatta 44508306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 3881010 - 3881068
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||| ||||    
T  3881010 cacactctattttttcaattcacgcaatattagatcaaagtataattacttggtattta 3881068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 23247701 - 23247663
Alignment:
Q  126 ttatttttatcattatcaagtatttaaaattaaataccg 164  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23247701 ttatttttatcattatcaagtatttaaaattaaataccg 23247663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 10392135 - 10392086
Alignment:
Q  174 ttttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  10392135 ttttttcaattcacacaacactagatcaaagtataattacttggtgttta 10392086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 23319797 - 23319870
Alignment:
Q  52 tcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattacta 125  Q
    |||||||||| ||||||| | ||||| | |||||||||| ||||||||| | ||||||||| ||||||||||||    
T  23319797 tcttattcttgtcacaaccaacataaaccaaatttatggcaagtgatatccacgaataaaagtaataattacta 23319870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 8269347 - 8269394
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  8269347 cacactctatttattcaattcacacaatattagatcaaagtataatta 8269394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 26286369 - 26286264
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    ||||||||||||   ||||| ||||| |||||| ||||| ||| |  ||||||| ||||||||| | ||||||||| ||||||||||  |||||||||||    
T  26286369 tcttatcacaacacacataacctaaaattatgggaagtg-tatccatgaataaagaataataataattattattttcatcattatcagttatttaaaatt 26286271  T
Q  157 aaatacc 163  Q
    |||||||    
T  26286270 aaatacc 26286264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 15973608 - 15973702
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaa 154  Q
    |||||||||||| | ||||| ||||| |||||| |||| |||| | | |||||| | |||  |||||||||||||||||||||||  ||||||||||    
T  15973608 tcttatcacaaccaacataaactaaaattatgggaagttatatgcacaaataaagaaaat--ttactattatttttatcattatccggtatttaaaa 15973702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 44508472 - 44508435
Alignment:
Q  126 ttatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  44508472 ttatttttatcattatcaaatatttaaaattaaatacc 44508435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 10387386 - 10387346
Alignment:
Q  182 attcacacaacattagatcaaagtataattatttggtgttt 222  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  10387386 attcacacaacactagatcaaagtataattacttggtgttt 10387346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 3046620 - 3046670
Alignment:
Q  173 attttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||| |||||||||||||| ||| |||||| |||||||| ||||||||||    
T  3046620 attttttcaattcacacaactttatatcaaattataattacttggtgttta 3046670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 30259301 - 30259359
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||| ||| |||| ||||||||||| |||||| ||||| ||||    
T  30259301 cacactctattttttcaatttacaaaacactagatcaaagtttaattacttggtattta 30259359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 7570481 - 7570321
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataaga-aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatatt 101  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  7570481 gaggaaacaaactattggatttgaatgaaggaaatataatataattaaattattattcttatcacaaccaccataaactaaatttatggaaagtgatatt 7570382  T
Q  102 ctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7570381 ctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 7570321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 20520785 - 20520954
Alignment:
Q  2 agaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||     |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  20520785 agaggaaacaaactattgggtttgaataaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataagctaaatttatgggaagtg 20520884  T
Q  97 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20520885 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaagttaaataccgca 20520954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 14437966 - 14437796
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt----------aaattcttattcttatcacaacgaccataagctaaatttatggaa 92  Q
    |||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||||||||||||| ||| ||||||||||||||||||    
T  14437966 gaggaaacaaactattggatttgaatgaaggaaatataagaaattcaattaaattaaattcttattcttatcacaacaaccgtaagctaaatttatggaa 14437867  T
Q  93 agtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14437866 agtgatattctcgaataaaaataataattattattatttttatcattatcaagtatttaaaattaaatacc 14437796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 23660756 - 23660595
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| |||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  23660756 gaggaaccaaactattggatttgaatgaagaaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 23660657  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23660656 tctctaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 23660595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 23665388 - 23665227
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| |||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  23665388 gaggaaccaaactattggatttgaatgaagaaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 23665289  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23665288 tctctaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 23665227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 27709760 - 27709921
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  27709760 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataaactaaatttatgaaaagtgatat 27709859  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27709860 tctcgaataaaa-taataattactattatttttatcattatcaagtatttaaaattaaatacc 27709921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 46964842 - 46965006
Alignment:
Q  7 aaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatatt 101  Q
    |||||||||| ||||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  46964842 aaacaaactactggatttgaatgaaggaaatataagaaattcaattaaattcttattcttatcacaaccaccataagctaaatttatgtgaagtgatatt 46964941  T
Q  102 ctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  46964942 ctcgaataaaaataattattattattatttttatcattatcaagtatttaaaattaaataccgca 46965006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 18468041 - 18468202
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||| |||||||||| ||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  18468041 gaggaaaaaaactattgggtttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 18468140  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18468141 tctcg-attaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 18468202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 55326606 - 55326767
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||  |||||||| ||  |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  55326606 gaggaaacaaactattggatttgaatgaatgaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatcgaaagtgatat 55326705  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  55326706 tctcgaat-aaaataataactactattatttttatcattatcaagtatttaaaattaaatacc 55326767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 18472835 - 18472996
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||||||||| |||||||| | | |||||||| ||  |||||||| |||||||||||||||| | ||||||||||||||||||||||||||||    
T  18472835 gaggaaacaaactattgaatttgaataatggaaatataataataattaaattattattcttatcacaaccatcataagctaaatttatggaaagtgatat 18472934  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18472935 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 18472996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 39775092 - 39774931
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||||||||  |||||||||||  |||||||| ||  |||||||| |||||||||||||||| | ||||||||||||||||||||||||||||    
T  39775092 gaggaaacaaactattatatttgaatgaatgaaatataataataattaaattattattcttatcacaaccatcataagctaaatttatggaaagtgatat 39774993  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39774992 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 39774931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 55432058 - 55432216
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattc 102  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||   |||||||||||||| |||||||| ||||||||||| || ||||||||    
T  55432058 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaa-attcttatcacaaccaccataagttaaatttatgggaaatgatattc 55432156  T
Q  103 tcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatac 162  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  55432157 tcgaataaaaataataattaatataatttttatcattatcaaatatttaaaattaaatac 55432216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 12971078 - 12970911
Alignment:
Q  6 gaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||     ||||||||||| |||||||||| | |||||||||||||||||| |||||||||    
T  12971078 gaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttattattatcacaaccatcataagctaaatttatgggaagtgatat 12970979  T
Q  101 tctcgaataaaaataataattactattat-ttttatcattatcaagta-tttaaaattaaataccgca 166  Q
    || |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  12970978 tcacgaataaaaataataattactattattttttatcattatccagtattttaaaattaaataccgca 12970911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 757629 - 757470
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||| ||||| |||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  757629 gaggtaacaagctattggatttgaatgaagaaaatataataataattaaattattattcttatcacaaccaccataaactaaatttatggaaagtgatat 757530  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| |   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  757529 tctcta--taaaataataattactattatttttatcattatcaagtattt-aaattaaatacc 757470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 3419817 - 3419960
Alignment:
Q  3 gaggaaacaaactattgga-tttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||| ||||||||||||  |||||    
T  3419817 gaggaaacaaactatttgaatttgaatgaaggaaatataagaaattcaattaaattcttattcttatcacaactaccatatgctaaatttatgcgaagtg 3419916  T
Q  97 atattctcgaataaaaataataattactattatttttatcatta 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  3419917 atattctcgaataaaaataataattactattatttttatcatta 3419960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 12965154 - 12964986
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||||     |||||||||||||||||||| | | |||||||||||||||||| ||||||    
T  12965154 gaggaaacgaactactggatttgaatgaaggaaatataagaaattgaattaaattcttattcttatcacatccatcataagctaaatttatgggaagtga 12965055  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagta-tttaaaattaaataccgca 166  Q
    ||||   | || ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  12965054 tatttatgtat-aaaataataattactattatttttatcattatcaaatattttaaaattaaataccgca 12964986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 32473290 - 32473183
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  32473290 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 32473191  T
Q  101 tctcgaat 108  Q
    ||||||||    
T  32473190 tctcgaat 32473183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 12111808 - 12111690
Alignment:
Q  50 attcttattcttatcacaacgaccataagctaaattta----tggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaag 145  Q
    |||| |||||||| |||||  |||||||||||||||||    ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12111808 attcatattcttagcacaatcaccataagctaaatttaattatgggaagtgatattcacgaataaaaataataattactattatttttatcattatcaag 12111709  T
Q  146 tatttaaaattaaataccg 164  Q
     ||||||||||||||||||    
T  12111708 catttaaaattaaataccg 12111690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 46965051 - 46965109
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46965051 cacactctattttttcaattcacacaacattagatcaaagtataattatttggtgttta 46965109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 757421 - 757363
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  757421 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 757363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 7570272 - 7570214
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7570272 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 7570214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 20521000 - 20521058
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  20521000 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 20521058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 23660546 - 23660488
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23660546 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 23660488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 23665178 - 23665120
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23665178 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 23665120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 18473045 - 18473103
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||    
T  18473045 cacactctattttttcaattcacacaacattagatcaaagtataattactttgtgttta 18473103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 20175429 - 20175487
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||    
T  20175429 cacactctattttttcaattaacacaacattagatcaaagtataattacttggtgttta 20175487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 29351111 - 29351217
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | ||||| ||||| |||||  ||||||||| |  ||||||| ||||||||||| ||||||||| ||||||||||  |||||||||||    
T  29351111 tcttatcacaacaaacataatctaaaattatgagaagtgatatccatgaataaagaataataattattattattttcatcattatcagatatttaaaatt 29351210  T
Q  157 aaatacc 163  Q
    |||||||    
T  29351211 aaatacc 29351217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 18468250 - 18468309
Alignment:
Q  165 cacactctattttat-caattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||||    
T  18468250 cacactctatttttttcaattcacacaacattagatcaaactataattacttggtgttta 18468309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 12970865 - 12970807
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| |||||||||||||||||| ||||| ||||||||| ||||||||||    
T  12970865 cacactttattttttcaattcacacaacattaaatcaacgtataattacttggtgttta 12970807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 32473185 - 32473143
Alignment:
Q  181 aattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  32473185 aattcacacaacattagatcaaagtataattacttggtgttta 32473143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 55326816 - 55326873
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  55326816 cacactatattttttcaattcacacaacattagatcaaa-tataattacttggtgttta 55326873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 3656472 - 3656363
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa----aataataattactattatttttatcattatcaagtatttaaa 153  Q
    |||||||||||| | |||||  |||| |||||  ||||||||| |  |||||||    ||||||||| | ||||||||| |||||||||| |||||||||    
T  3656472 tcttatcacaacaaacataacataaaattatgagaagtgatatccatgaataaagaataataataataattattattttcatcattatcaggtatttaaa 3656373  T
Q  154 attaaatacc 163  Q
    ||||||||||    
T  3656372 attaaatacc 3656363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 14437747 - 14437692
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||||| ||||||||||    
T  14437747 cacactctattttttcaattcacacaac---agatcaaagtataattacttggtgttta 14437692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 38891155 - 38891213
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| |||||||||| |||||||||||||||| |||||| | ||||||||    
T  38891155 cacactatattttttcaattcacaaaacattagatcaaagtttaattactcggtgttta 38891213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 55432264 - 55432321
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| |||||||||||| |||||||||||| |||||||| ||||||||||    
T  55432264 cacactttattttttcaattcacacagcattagatcaaa-tataattacttggtgttta 55432321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 3656309 - 3656256
Alignment:
Q  170 tctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||| ||||||||||||||| || |||||||| |||||| ||||||||||    
T  3656309 tctattttttcaattcacacaacactaaatcaaagtttaattacttggtgttta 3656256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 12565296 - 12565247
Alignment:
Q  108 taaaaataataattactattat---ttttatcattatcaagtatttaaaa 154  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||||||    
T  12565296 taaaaataataattactattattttttttatcattatcaggtatttaaaa 12565247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 12964941 - 12964882
Alignment:
Q  165 cacactctattttat-caattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| | |||||||  |||||||| ||||||||||||||| ||||||||||    
T  12964941 cacactctatttttttcaattcatgcaacattaaatcaaagtataattacttggtgttta 12964882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 13259695 - 13259646
Alignment:
Q  108 taaaaataataattactattat---ttttatcattatcaagtatttaaaa 154  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||||||    
T  13259695 taaaaataataattactattattttttttatcattatcaggtatttaaaa 13259646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 27709967 - 27710025
Alignment:
Q  165 cacactctattttatcaattcacacaacatt-agatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||||| | |||||||||||| || ||||||||||    
T  27709967 cacactctattttttcaattcacacaacattaaaatcaaagtataa-tacttggtgttta 27710025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 3426125 - 3426167
Alignment:
Q  181 aattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||||| |||| |||||||||||| ||||||||||    
T  3426125 aattcacacaacataagattaaagtataattacttggtgttta 3426167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 16421871 - 16422039
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataaga-----aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||| ||||||||||||| |||||||| |     |||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  16421871 gaggaaacaaactatttgatttgaatgaaggaaatataataaatttaattaaattcttattcttatcacaaccaccataagttaaatttatggaaagtga 16421970  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16421971 tattctcgaataaaaataataattactattatttttatcattatcaagtattgaaaattaaataccgca 16422039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 8694542 - 8694703
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  8694542 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaaatattattcttatcacaaccaccataacctaaatttatggaaagtgatat 8694641  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8694642 tctcgaataaaa-taataattactattatttttatcattatcaagtatttaaaattaaatacc 8694703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 31728632 - 31728471
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  31728632 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatgaaaagtgatat 31728533  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31728532 tctcgaat-aaaataataattactattatttttatcattatgaagtatttaaaattaaatacc 31728471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 37263830 - 37263669
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| ||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  37263830 gaggaaccaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 37263731  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37263730 tctcgaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 37263669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 13060291 - 13060459
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||     ||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  13060291 gaggaaacaaagtattggatttgaatgaaggaaatataagaaattcaattaaattcttatttttatcacaaccaccataagctaaatttatgggaagtga 13060390  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13060391 tattctcaaataaaaataagaattactattattgttatcattatcaagtatttaaaattaaataccgca 13060459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 51698751 - 51698922
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51698751 gaggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataagctaaatttatggaaagtga 51698850  T
Q  98 tattctcgaat-aaaaataataattacta--ttatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||| |||||||||||||||||  || ||||||||||||||||| ||||||||||||||||||||    
T  51698851 tattctcgaataaaaaataataattactattttttttttatcattatcaagcatttaaaattaaataccgca 51698922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 31274343 - 31274504
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| ||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  31274343 gaggaaccaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 31274442  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  31274443 tctcgaat-aaaataataattactattatttttatcactgtcaagtatttaaaattaaatacc 31274504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 32081435 - 32081273
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataaga-----aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||| ||||||| ||||||||||||||||| |     |||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  32081435 gaggaaacaaactgttggatt-gaatgaagaaaatataaaaaattcaattaaattcttattcttatcacaaccaccataagctaaatttatgggaagtga 32081337  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaata 161  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32081336 tattctcgaataaaaataataattactattatttttataattatcaagtatttaaaattaaata 32081273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 55252482 - 55252637
Alignment:
Q  16 attggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataa 110  Q
    ||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  55252482 attggatttgaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataagctaaatttatggaaagtaatattctccaataa 55252581  T
Q  111 aaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  55252582 aaataataattgctattatttttatcattatcaagtatttaaaattaaataccgca 55252637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 19907073 - 19907241
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||     ||||||||||||||||| |||| | |||||||||||||||||| ||||||    
T  19907073 gaggaaacaaactattggatttgaacgaaggaaatataagaaatttaattaaattcttattcttatcgcaacaatcataagctaaatttatgggaagtga 19907172  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  19907173 tattcacgaataaaaataataatttctattatttttatcatcatcaagtatttaaaattaaataccgca 19907241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 37259130 - 37258969
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| ||||||||||||||||||| ||| |||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  37259130 gaggaaccaaactattggatttgaataaaggaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtgatat 37259031  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37259030 tctctaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 37258969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 13065081 - 13064913
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatta------aattcttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    |||||||||||||  | ||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  13065081 gaggaaacaaactcattgatttgaatgaagaaaatataagaaatttcaattgaattcttattcttatcacaaccaccataagctaaatt-atgggaagtg 13064983  T
Q  97 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13064982 atattcacgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 13064913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 31766701 - 31766863
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| ||||| |||| ||||| ||||||| ||||||||||||||||||||||    
T  31766701 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattatttttataacaaccaccataaactaaatttatggaaagtgatat 31766800  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtattt-aaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31766801 tctcgaat-aaaataataattactattatttttatcattatcaagtatttaaaaattaaatacc 31766863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 5270690 - 5270528
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||    
T  5270690 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattatttttcttatcacaaccaccataagctaaatttatggaaagtgatat 5270591  T
Q  101 tctcgaataaaaataataattactattatttttatcattatc-aagtatttaaaattaaatacc 163  Q
    ||  |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  5270590 tcgagaat-aaaataataactactattatttttatcattatcaaagtatttaaaattaaatacc 5270528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 33468268 - 33468109
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||     |||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  33468268 gaggaaacaaactattgaatttgaatgaaggaaatataagaaattcaattaaattcttattcttatcataaccaccataagctaaatttatgggaagtga 33468169  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatac 162  Q
    ||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33468168 tattct-----aaaaataataattactattatttttatcattatcaagtatttaaaattaaatac 33468109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 32220832 - 32220672
Alignment:
Q  4 aggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgat 98  Q
    |||||| |||| ||| ||||||||||||| ||||||||||||||     |||||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  32220832 aggaaagaaaccattagatttgaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccataagttaaatttatgaaaagtgat 32220733  T
Q  99 attctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaata 161  Q
    ||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32220732 attc--gaataaaaataataattactattatttttatcattatcaaatatttaaaattaaata 32220672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 29349478 - 29349308
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||     ||||| |||||||||||| ||| |||||||||||||||||||| || |||    
T  29349478 gaggaaacaaattattggatttgaatgaaggaaatataagaaatttaattaaatttttattcttatcataacaaccataagctaaatttatgggaaatga 29349379  T
Q  98 tattctcgaat-aaaaataataattactatta-tttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  29349378 tattcacgaataaaaaataataattaatattattttttatcattatccagtatttaaaattaaataccgca 29349308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 33462619 - 33462464
Alignment:
Q  4 aggaaacaaactattggatttgaatgaagaaaatataaga-----aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgat 98  Q
    |||||||||| |||||||||||||||||| |||||||| |     ||||||||| |||||||||||||||| ||| |||||||||||||||| |||||||    
T  33462619 aggaaacaaattattggatttgaatgaaggaaatataaaaaattcaattaaattattattcttatcacaaccaccgtaagctaaatttatgggaagtgat 33462520  T
Q  99 attctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaa 159  Q
    ||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33462519 attc-----taaaaataataattactattatttttatcattatcaagtatttaaaattaaa 33462464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 2820670 - 2820785
Alignment:
Q  50 attcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatt 149  Q
    ||||||| |||||||||||| | |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| || |    
T  2820670 attcttaatcttatcacaaccaacataagctaaatttatgggaagtgatattcac-aataaaaataataattactattatttttatcattatcaaataat 2820768  T
Q  150 taaaattaaataccgca 166  Q
    |||||||||||||||||    
T  2820769 taaaattaaataccgca 2820785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 5927484 - 5927363
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||| |||||||||||||||  | ||||||||||||||||||||||||||||    
T  5927484 gaggaaacaaactattggatttgaatgaaggaaatataataataattaaattattattcttatcacaatcatcataagctaaatttatggaaagtgatat 5927385  T
Q  101 tctcgaataaaaataataattac 123  Q
    |||||||| ||||||||||||||    
T  5927384 tctcgaat-aaaataataattac 5927363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 12823097 - 12823016
Alignment:
Q  82 aatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12823097 aatttatgggaagtgatattctggaataaaaataataattactattatttttatcattataaagtatttaaaattaaatacc 12823016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 23093980 - 23094096
Alignment:
Q  44 aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttttatcattatca 143  Q
    |||| |||||||||||||||||||||    |||||||||||||| |  |||||||||     ||||||||||||||||||||||||||||||||||||||    
T  23093980 aattgaattcttattcttatcacaacctatataagctaaatttacgagaagtgatatctataaataaaaataataattactattatttttatcattatca 23094079  T
Q  144 agtatttaaaattaaat 160  Q
    |||||||||||||||||    
T  23094080 agtatttaaaattaaat 23094096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 39216323 - 39216233
Alignment:
Q  44 aattaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattattttta 134  Q
    |||| ||||||||||||||||||||| | |||||| ||||||||||  ||||||||| | |||||||||||||||||||||||||||||||    
T  39216323 aattgaattcttattcttatcacaaccaacataagataaatttatgcgaagtgatatacacgaataaaaataataattactattattttta 39216233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 12822967 - 12822910
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttt 222  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12822967 cacactctattttttcaattcacacaacattagatcaaagtataattatttggtgttt 12822910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 12875290 - 12875394
Alignment:
Q  60 ttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaa-ataataattactattatttttatcattatcaagtatttaaaattaa 158  Q
    |||||||||| | ||||| ||||| |||||| |||||||||||  || ||||| ||||||||||||||||| |||||||||||||| |||||||||| ||    
T  12875290 ttatcacaaccaacataacctaaaattatgggaagtgatattcatgagtaaaaaataataattactattatgtttatcattatcaaatatttaaaatcaa 12875389  T
Q  159 atacc 163  Q
    |||||    
T  12875390 atacc 12875394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 40408819 - 40408940
Alignment:
Q  50 attcttattcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataat------tactattatttttatcattatca 143  Q
    |||||||||  |||||| || |||||||||||||| ||||| ||||||||||| | |||||||||||||||      |||||||||||||| || |||||    
T  40408819 attcttatttctatcactaccaccataagctaaatgtatgggaagtgatattcactaataaaaataataattactactactattatttttacca-tatca 40408917  T
Q  144 agtatttaaaattaaataccgca 166  Q
    | |||||||||||||||||||||    
T  40408918 aatatttaaaattaaataccgca 40408940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 8694752 - 8694810
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  8694752 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 8694810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 16422085 - 16422143
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  16422085 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 16422143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 31274553 - 31274611
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  31274553 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 31274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 37263620 - 37263562
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  37263620 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 37263562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 5270480 - 5270422
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  5270480 cacattctattttttcaattcacacaacattagatcaaagtataattacttggtgttta 5270422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 31728423 - 31728365
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  31728423 cacactctattttttcaattcacacaacattagatcaaattataattacttggtgttta 31728365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 33462414 - 33462357
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  33462414 cacactctattttttcaattcacacaacattagatcaaa-tataattatttggtgttta 33462357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 51698968 - 51699026
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  51698968 cacactctattttttcaattcacgcaacattagttcaaagtataattatttggtgttta 51699026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 33468059 - 33468002
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||    
T  33468059 acactctattttttcaatttacacaacattagatcaaagtataattacttggtgttta 33468002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 19102850 - 19102954
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | ||||| ||||| |||||  ||||||||| |  || |||| ||||||||||| ||||||||| |||||||||| ||||||||||||    
T  19102850 tcttatcacaacaaacataacctaaaattatgagaagtgatatccatgattaaagaataataattattattattttcatcattatcaggtatttaaaatt 19102949  T
Q  157 aaata 161  Q
    |||||    
T  19102950 aaata 19102954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 5925943 - 5925901
Alignment:
Q  121 tactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5925943 tactattatttttatcattatcaagtatttaaaattaaatacc 5925901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 19107510 - 19107568
Alignment:
Q  105 gaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  19107510 gaataagaataataattattattattttcatcattatcaggtatttaaaattaaatacc 19107568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 27183183 - 27183225
Alignment:
Q  121 tactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27183183 tactattatttttatcattatcaagtatttaaaattaaatacc 27183225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 12823156 - 12823112
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt 47  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  12823156 gaggaaacaaactattggatttgaatgaaggaaatataagaaatt 12823112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 37258920 - 37258864
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||    
T  37258920 cacactctattttttcaattcacacaacattagatcaaag--taattacttggtgttta 37258864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 8029392 - 8029334
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||| | ||||||||||| |||||| ||||||||||    
T  8029392 cacactctattttttcaattcacacaatactagatcaaagtttaattacttggtgttta 8029334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 12875443 - 12875501
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  12875443 cacactctattttttcaattcacacaacactagatgaaagtctaattacttggtgttta 12875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 19907327 - 19907385
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||| |||||| ||||||||||||||| ||||||||| |||||||| ||||||||||    
T  19907327 cacactttattttttcaattcacacaacactagatcaaaatataattacttggtgttta 19907385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 48276048 - 48275942
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    ||||||||| || | ||||| ||||| ||| || |||||||||    ||||||| ||||||||||| ||||||||| |||||||| |||||||||||| |    
T  48276048 tcttatcacgacaaacataacctaaaattacgggaagtgatatctatgaataaacaataataattattattattttcatcattattaagtatttaaaaat 48275949  T
Q  157 aaatacc 163  Q
    |||||||    
T  48275948 aaatacc 48275942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 16948885 - 16948990
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaaaataataattactattatttt-tatcattatcaagtatttaaaatt 156  Q
    |||||||| ||| | ||||||||||| |||||| || ||||||    || ||||| |||||||||||||| |||| ||||||||||||||||| |||| |    
T  16948885 tcttatcataaccaacataagctaaaattatgggaaatgatatcaatgagtaaaactaataattactattcttttttatcattatcaagtattcaaaact 16948984  T
Q  157 aaatac 162  Q
    ||||||    
T  16948985 aaatac 16948990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 39216234 - 39216186
Alignment:
Q  108 taaaaataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  39216234 taaaaataataattacgattatttttatcattatcaaatattaaaaatt 39216186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 13060505 - 13060564
Alignment:
Q  165 cacactctattttat-caattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||||| |||| |||||    
T  13060505 cacactctatttttttcaattcacacaatattagatcaaagtataattacttggggttta 13060564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 55252683 - 55252742
Alignment:
Q  165 cacactctattttat-caattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||||||| ||| ||||||    
T  55252683 cacactctatttttttcaattcacacaacattaaatcaaagtataattacttgatgttta 55252742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 2820831 - 2820888
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||| ||| ||||||||||||||| ||||||||| |||||||| ||||||||||    
T  2820831 cacactctaatttttcaattcacacaacactagatcaaa-tataattacttggtgttta 2820888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 5925853 - 5925803
Alignment:
Q  173 attttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||| ||||    
T  5925853 attttttcaattcacacaacattatatcaaagtataattacttggtattta 5925803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 6943684 - 6943773
Alignment:
Q  83 atttatggaaagtgatattctcgaataaaaataataattacta----------ttatttttatcattatcaagtatttaaaattaaatac 162  Q
    |||||||| ||||||||||| | ||||||||||||||||||||          || |||||||||||||||||||||| |||||||||||    
T  6943684 atttatgggaagtgatattcaccaataaaaataataattactactactattatttttttttatcattatcaagtatttgaaattaaatac 6943773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 8028211 - 8028165
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  8028211 acactctattttttcaattcacacaacattcgatcaaagtttaatta 8028165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 19103005 - 19103063
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||| | |||| |||||    
T  19103005 cacactctattttttcaattcacacaacactagatcaaagtttaataacttggagttta 19103063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 13064867 - 13064811
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgtttat 224  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| ||||| |||||    
T  13064867 cacactctattttttcaattca---aacattagatcaaagtataattacttggtatttat 13064811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 27183278 - 27183322
Alignment:
Q  179 tcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||    
T  27183278 tcaattcacacaacattatatcaaagtataattacttggtattta 27183322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 28601561 - 28601617
Alignment:
Q  105 gaataaaaataataattactattatttttatcattatcaagtatttaaaattaaata 161  Q
    ||||||||| ||| |||| |||||||||||||||||  || ||||||||||||||||    
T  28601561 gaataaaaaaaattattattattatttttatcattactaaatatttaaaattaaata 28601617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 40408989 - 40409041
Alignment:
Q  171 ctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||| | |||||| ||||||||||||||||||||||| |||| |||||||    
T  40408989 ctatttttttaattcatacaacattagatcaaagtataatcatttagtgttta 40409041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 8029540 - 8029469
Alignment:
Q  85 ttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaat 155  Q
    |||||| ||||||||| |  ||||||| |||||| |||| ||||||||| |||||||||||||| |||||||    
T  8029540 ttatgggaagtgatatccatgaataaagaataattattattattattttcatcattatcaagtacttaaaat 8029469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 32220621 - 32220574
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||||||| | ||||||||||| ||||||||||| ||||||||    
T  32220621 cacactctatttttttaattcacacaatattagatcaaaatataatta 32220574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 29349263 - 29349206
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||||||| || |||||||    
T  29349263 cacactctattttttcaattcactcaacacta-atcaaagtataattacttagtgttta 29349206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 48275896 - 48275838
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||  |||||||||| |||| | ||| ||||||    
T  48275896 cacactctattttttcaattcacacaacacaagatcaaagtttaataacttgatgttta 48275838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 32081222 - 32081178
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    ||||||||||||| ||||||||||||   |||||||||||||||||||    
T  32081222 cacactctattttttcaattcacaca---ttagatcaaagtataatta 32081178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 16958263 - 16958295
Alignment:
Q  130 ttttatcattatcaagtatttaaaattaaatac 162  Q
    |||||||||||| ||||||||||||||||||||    
T  16958263 ttttatcattatgaagtatttaaaattaaatac 16958295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 29985161 - 29985109
Alignment:
Q  91 aaagtgatattctcgaataaa-aataataattactattatttttatcattatc 142  Q
    ||||| |||| | |||||||| ||||||||||||||| |||||||||||||||    
T  29985161 aaagttatatgcacgaataaataataataattactatcatttttatcattatc 29985109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 116; Significance: 4e-59; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 4893 - 5054
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||| |||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  4893 gaggaaccaaactattggatttgaatgaagaaaatataataataattaaattattattcttatcacaaccaccataagctaaatttatggaaagtaatat 4992  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4993 tctctaat-aaaataataattactattatttttatcactatcaagtatttaaaattaaatacc 5054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 443209 - 443045
Alignment:
Q  4 aggaaacaaactattggatttgaatgaagaaaatataagaaattaaattc-----ttattcttatcacaacgaccataagctaaatttatggaaagtgat 98  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||      ||||| |||||||||| | |||||| ||||||||| |||| ||||    
T  443209 aggaaacaaactattggatttgaatgaaggaaatataagaaatttaattaaactattatttttatcacaaccatcataagttaaatttattgaaaatgat 443110  T
Q  99 attctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  443109 attctctaataaaaataataattactattatttttatcattatcaaatatttaaaattaaatacc 443045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 442997 - 442947
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattattt 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  442997 cacactctattttttcaattcacacaacattagatcaaagtataattattt 442947  T

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Target: scaffold0002; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 5103 - 5161
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | | ||||||||||    
T  5103 cacactctattttttcaattcacacaacattagatcaaagtatattaacttggtgttta 5161  T

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Target: scaffold0054 (Bit Score: 110; Significance: 1e-55; HSPs: 4)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 30005 - 30170
Alignment:
Q  6 gaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||| |||||||||| || |||| ||||||||||||||     |||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  30005 gaaacaaattattggatttcaacgaaggaaatataagaaattcaattaaattcttattcttatcacaaccaccataaactaaatttatgggaagtgatat 30104  T
Q  101 tctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  30105 tctcgaataaaaataataattactattatttttatcattatcatgtagttaaaattaaataccgca 30170  T

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Target: scaffold0054; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 30217 - 30274
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  30217 acactctattttttcaattcacacaacattagatcaaaatataattacttggtgttta 30274  T

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Target: scaffold0054; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 26325 - 26431
Alignment:
Q  58 tcttatcacaacgaccataagctaaatttatggaaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaaatt 156  Q
    |||||||||||| | ||||| ||||| |||||||||||||||| |  ||||||| | ||||||| |  |||||||| || ||||||| ||||||||||||    
T  26325 tcttatcacaacaaacataacctaaaattatggaaagtgatatccatgaataaatattaataataataattattttcattattatcaggtatttaaaatt 26424  T
Q  157 aaatacc 163  Q
    |||||||    
T  26425 aaatacc 26431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 26482 - 26538
Alignment:
Q  167 cactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||| ||||||||||||||  ||||| ||||| |||||||||||||||||    
T  26482 cactctattttttcaattcacacaactctagatgaaagtttaattatttggtgttta 26538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 7937 - 8099
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaa--attaaattcttattcttatcacaacgaccataagctaaatttatggaaagtgatat 100  Q
    |||||||||||||||||||||||||||||  |||||||| ||  |||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||    
T  7937 gaggaaacaaactattggatttgaatgaatgaaatataataataattaaattattattcttatcacaaccgccataagctaaatttatgaaaagtgatat 8036  T
Q  101 tctcgaataaaaataataattactatta-tttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8037 tctcgaat-aaaataataattactattattttttatcattatcaagtatttaaaattaaatacc 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 8148 - 8206
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  8148 cacactctattttttcaattcacacaacattaaatcaaagtataattacttggtgttta 8206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 35948 - 36115
Alignment:
Q  3 gaggaaacaaactattggatttgaatgaagaaaatataagaaatt-----aaattcttattcttatcacaacgaccataagctaaatttatggaaagtga 97  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||     |||||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  35948 gaggaaacaaactattagatttaaatgaaggaaatataagaaatttaattaaattcttattcttatcacaaccaccata-gctaaatttatgggaagtga 36046  T
Q  98 tattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36047 tattcacaaataaaaataataattactattatttttatcattatcaaatatttaaaattaaataccgca 36115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 36160 - 36218
Alignment:
Q  165 cacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  36160 cacactctattttttcaattcatacaacattagatcaaaatataattatttggtgttta 36218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 107; Significance: 9e-54; HSPs: 2)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 6056 - 6222
Alignment:
Q  3 gaggaaacaaact-attggatttgaatgaagaaaatataagaaattaa-----attcttattcttatcacaacgaccataagctaaatttatggaaagtg 96  Q
    ||||||||||||| ||| ||||||||||||| ||| |||||||||| |     ||||||||||||||||||||  ||||||||||||||||||| |||||    
T  6056 gaggaaacaaactcatttgatttgaatgaaggaaagataagaaatttaggtgaattcttattcttatcacaacctccataagctaaatttatgggaagtg 6155  T
Q  97 atattctcgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6156 atattcacgaataaaaataataattactattatttttatcattatcaagtatttaaaattaaatacc 6222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 6272 - 6329
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||    
T  6272 acactctattttttcaattcacataacattagatcgaagtataattacttggtgttta 6329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 4872 - 4965
Alignment:
Q  74 ataagctaaatttatggaaagtgatattctcgaataaaaataataattactatta-tttttatcattatcaagtatttaaaattaaataccgca 166  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4872 ataaactaaatttatgggaagtgatattcacgaataaaaataataattactattattttttatcattatcaagtatttaaaattaaataccgca 4965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 5003 - 5066
Alignment:
Q  160 taccgcacactctattttatcaattcacacaacattagatcaaagtataattatttggtgttta 223  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  5003 taccccacactatattttttcaattcacacaacattagatcaaagtataattacgtggtgttta 5066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 3948 - 3906
Alignment:
Q  124 tattatttttatcattatcaagtatttaaaattaaataccgca 166  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  3948 tattatttttatcattatcaagtatttgaaattaaataccgca 3906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 64950 - 64904
Alignment:
Q  166 acactctattttatcaattcacacaacattagatcaaagtataatta 212  Q
    |||||||||||| | ||||||||||||| ||||||||||| ||||||    
T  64950 acactctatttttttaattcacacaacactagatcaaagtttaatta 64904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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