View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10381_low_21 (Length: 242)
Name: NF10381_low_21
Description: NF10381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10381_low_21 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 21242257 - 21242479
Alignment:
| Q |
20 |
tcctcttcccctaacaaaaccgccctcatcgacgcagactcttcccgaacattctccttctctcaactcaaaacacaagttgcaaaacttgcacacagtt |
119 |
Q |
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| T |
21242257 |
tcctcttcccctaacaaaaccgccctcatcgacgcagactcttcccaaacactctccttctctcaactcaaaacacaagttgcaaaacttgcacacagtt |
21242356 |
T |
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| Q |
120 |
tactaaactttggcataaacaaaaacgacgtcgtcctcatcctctcccctaataacatcgaattccctgtatgtttcctagctgctgcctccatcggcgc |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21242357 |
tactaaactttggcataaacaaaaacgacgtcgtcctcatcctctcccccaataacatcgaattccctgtatgtttcctagctgctgcctccatcggcgc |
21242456 |
T |
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| Q |
220 |
aatagtcaccactgcaaatcctc |
242 |
Q |
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||||||||||||||||||||||| |
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| T |
21242457 |
aatagtcaccactgcaaatcctc |
21242479 |
T |
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