View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10382_high_17 (Length: 272)
Name: NF10382_high_17
Description: NF10382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10382_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 42956105 - 42956359
Alignment:
| Q |
5 |
agaatttgacgacataattaagatgaaaagaaaacaacatatcctactcaccgacttggcaatcgagcacataaagtggctagtttcatgagattcaatg |
104 |
Q |
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| T |
42956105 |
agaatttaacgacataattaagatgaaaagaaaacaacatatcctactcactgacttggcaatcgagcacataaagtggctagtttcatgagattcaatg |
42956204 |
T |
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| Q |
105 |
ttcgaaaatgcatcacccttgtgattatttgacaataattaaggtgtttttggcagc-tttacatactacctgtttgttactgaagtttctaactaaata |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
42956205 |
ttcgaaaatgcatcacccttgtgattatttgacaataattaaggtgtttttggcagcttttacatactacctgtttgttactgaagtttctaactaaata |
42956304 |
T |
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| Q |
204 |
aaagacaagacaaatgtatgattaagattgtcctctgctgcctgcgagagaatat |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42956305 |
aaagacaagacaaatgtatgattaagattgtcctctgctgcctgcgagagaatat |
42956359 |
T |
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