View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10382_high_19 (Length: 250)
Name: NF10382_high_19
Description: NF10382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10382_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 33902792 - 33902546
Alignment:
| Q |
1 |
aagatcgttgttatctcatccgcttttgatcacgttctagatgttcagtccttagcgtcattcnnnnnnngataatagatgtcccgtcatgaatgtgaga |
100 |
Q |
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|||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
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| T |
33902792 |
aagatcgttgttatctgatccacttttgatcacgttccagatgttcagtccttagcgtcattcaaaaaa-gataatagatgtcccgtcatgaacgtgaga |
33902694 |
T |
|
| Q |
101 |
aatgtggaccatggtgtacattgaaaagttagagaaaaagaa-----------aatggataatgaagaattgaaatgtgtgagactgtgtgggaattgga |
189 |
Q |
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||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| |
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| T |
33902693 |
aatgtggaccatggtgtgcattgaaaagttagagaaaaagaattgaaaaagaaaatggataatgaagaattgaaatgtgtgagacagtgtgg-aattgga |
33902595 |
T |
|
| Q |
190 |
gaggaagaagaagaaagcgtgagaatagggtctaatgaggaaacgttct |
238 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33902594 |
gaggaagaagaagaaagcgtgagaatagggtctaatgaggaaacgttct |
33902546 |
T |
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