View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10382_low_31 (Length: 237)
Name: NF10382_low_31
Description: NF10382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10382_low_31 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 46278950 - 46278728
Alignment:
| Q |
1 |
tgatgataaagaaaaataactgattgatttttctccctatctggtgaatatatgcagtaattagttatatatcattacattttagttttgaaatggaatt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
46278950 |
tgatgataaagaaaaataactgattgatttttctccctatctggtgaatatatgcagtaattagttatatatcattacattttagttttgaaatggagtt |
46278851 |
T |
|
| Q |
101 |
gaggtgtgttcaatttaatgctgctgctattgatgtcatatccatttacataacagtgttcctgatcctacctgacatatttccacatgctgtagttgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46278850 |
gaggtgtgttcaatttaatgctgctgctattgatgtcatatccatttacataacagtgttcctgatcctacctgacatatttccacatgctgtagttgtt |
46278751 |
T |
|
| Q |
201 |
ttttcttctctcaaagtccaacc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
46278750 |
ttttcttctctcaaagtccaacc |
46278728 |
T |
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