View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10383_high_3 (Length: 253)

Name: NF10383_high_3
Description: NF10383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10383_high_3
NF10383_high_3
[»] scaffold0210 (2 HSPs)
scaffold0210 (6-242)||(21425-21661)
scaffold0210 (6-242)||(29317-29553)
[»] chr2 (57 HSPs)
chr2 (12-242)||(40621827-40622057)
chr2 (11-242)||(45677774-45678005)
chr2 (11-218)||(22798769-22798976)
chr2 (11-242)||(24673845-24674076)
chr2 (12-242)||(37524934-37525164)
chr2 (11-242)||(22740579-22740810)
chr2 (12-242)||(21917935-21918165)
chr2 (12-242)||(25963336-25963566)
chr2 (11-239)||(23019328-23019556)
chr2 (11-242)||(22758334-22758565)
chr2 (27-218)||(23038320-23038511)
chr2 (17-208)||(44369952-44370143)
chr2 (27-218)||(23100873-23101064)
chr2 (20-214)||(24716188-24716372)
chr2 (82-242)||(22811553-22811713)
chr2 (34-116)||(22460936-22461018)
chr2 (21-242)||(21327196-21327407)
chr2 (17-242)||(21318265-21318480)
chr2 (33-242)||(24735680-24735879)
chr2 (35-109)||(15477883-15477957)
chr2 (34-116)||(18855207-18855289)
chr2 (34-116)||(23187353-23187435)
chr2 (34-219)||(23598616-23598791)
chr2 (35-116)||(61094-61175)
chr2 (35-116)||(19928248-19928329)
chr2 (38-222)||(24175093-24175267)
chr2 (38-221)||(24654989-24655162)
chr2 (17-219)||(40428736-40428929)
chr2 (134-241)||(24658032-24658139)
chr2 (33-116)||(19688502-19688585)
chr2 (38-109)||(25961287-25961358)
chr2 (35-96)||(12901278-12901339)
chr2 (35-96)||(24649636-24649697)
chr2 (38-222)||(24870173-24870347)
chr2 (35-96)||(27379198-27379259)
chr2 (35-96)||(27383244-27383305)
chr2 (35-96)||(27602076-27602137)
chr2 (37-96)||(26125484-26125543)
chr2 (37-96)||(41667230-41667289)
chr2 (35-96)||(24628244-24628305)
chr2 (35-96)||(41530775-41530836)
chr2 (12-65)||(22811708-22811761)
chr2 (48-96)||(24503402-24503450)
chr2 (52-88)||(23071733-23071769)
chr2 (53-104)||(32451685-32451736)
chr2 (54-88)||(22133986-22134020)
chr2 (181-222)||(37765-37806)
chr2 (182-219)||(19928155-19928192)
chr2 (182-219)||(22460843-22460880)
chr2 (182-219)||(23187491-23187528)
chr2 (177-218)||(23286288-23286329)
chr2 (182-219)||(26125619-26125656)
chr2 (181-222)||(28291940-28291981)
chr2 (182-219)||(41667365-41667402)
chr2 (52-88)||(37888-37924)
chr2 (56-104)||(27753892-27753940)
chr2 (52-88)||(31756231-31756267)
[»] chr7 (94 HSPs)
chr7 (6-242)||(17137682-17137918)
chr7 (21-242)||(10508701-10508922)
chr7 (27-242)||(9703552-9703767)
chr7 (11-242)||(11880522-11880753)
chr7 (11-242)||(12321361-12321592)
chr7 (24-242)||(12187296-12187514)
chr7 (11-223)||(24054738-24054950)
chr7 (12-242)||(14430149-14430379)
chr7 (27-218)||(18154479-18154670)
chr7 (11-218)||(19649127-19649334)
chr7 (17-242)||(2760403-2760628)
chr7 (72-241)||(15211759-15211928)
chr7 (33-219)||(48593109-48593285)
chr7 (33-242)||(11312925-11313124)
chr7 (34-117)||(16438779-16438862)
chr7 (34-116)||(6801490-6801572)
chr7 (33-242)||(15580968-15581168)
chr7 (33-116)||(11987489-11987572)
chr7 (33-116)||(13635215-13635298)
chr7 (34-116)||(18804-18886)
chr7 (35-219)||(13149433-13149607)
chr7 (35-116)||(15728603-15728684)
chr7 (34-242)||(26292673-26292871)
chr7 (33-116)||(12318404-12318487)
chr7 (34-116)||(14217192-14217274)
chr7 (33-242)||(15604902-15605101)
chr7 (34-108)||(18557249-18557323)
chr7 (33-109)||(9593622-9593698)
chr7 (33-109)||(9644585-9644661)
chr7 (34-109)||(13462039-13462114)
chr7 (34-116)||(16724377-16724459)
chr7 (34-116)||(17701391-17701473)
chr7 (38-116)||(20569342-20569420)
chr7 (34-109)||(8917704-8917779)
chr7 (17-116)||(9445904-9446003)
chr7 (35-96)||(12718948-12719009)
chr7 (35-96)||(12723859-12723920)
chr7 (35-96)||(16906966-16907027)
chr7 (35-96)||(18279683-18279744)
chr7 (35-96)||(18283646-18283707)
chr7 (37-116)||(16275772-16275851)
chr7 (47-116)||(11262619-11262688)
chr7 (47-116)||(11548013-11548082)
chr7 (47-116)||(11554609-11554678)
chr7 (47-116)||(12692786-12692855)
chr7 (35-96)||(12715144-12715205)
chr7 (47-116)||(14953488-14953557)
chr7 (35-96)||(16114521-16114582)
chr7 (35-96)||(16117674-16117735)
chr7 (47-96)||(35151896-35151945)
chr7 (48-116)||(14959455-14959523)
chr7 (72-241)||(16583550-16583709)
chr7 (47-116)||(25038956-25039025)
chr7 (36-108)||(42205394-42205466)
chr7 (127-242)||(3272173-3272288)
chr7 (182-242)||(13635099-13635159)
chr7 (53-101)||(15143795-15143843)
chr7 (48-88)||(18302489-18302529)
chr7 (181-222)||(11995696-11995737)
chr7 (177-222)||(34201221-34201266)
chr7 (182-242)||(17701275-17701335)
chr7 (52-88)||(28505071-28505107)
chr7 (53-105)||(44116820-44116872)
chr7 (49-88)||(2832075-2832114)
chr7 (49-88)||(39267416-39267455)
chr7 (53-104)||(40443703-40443754)
chr7 (181-223)||(26212427-26212469)
chr7 (181-223)||(28504938-28504980)
chr7 (182-219)||(11043-11080)
chr7 (182-219)||(18711-18748)
chr7 (181-218)||(2831948-2831985)
chr7 (182-219)||(6801628-6801665)
chr7 (182-219)||(9593761-9593798)
chr7 (182-219)||(9644724-9644761)
chr7 (181-218)||(9751192-9751229)
chr7 (182-219)||(11987628-11987665)
chr7 (51-88)||(11995800-11995837)
chr7 (182-219)||(15728740-15728777)
chr7 (182-219)||(16275907-16275944)
chr7 (182-219)||(16724284-16724321)
chr7 (181-222)||(27847482-27847523)
chr7 (182-219)||(35152021-35152058)
chr7 (53-102)||(38227795-38227844)
chr7 (34-71)||(39722544-39722581)
chr7 (181-222)||(40443819-40443860)
chr7 (52-88)||(68060-68096)
chr7 (48-88)||(810900-810940)
chr7 (17-65)||(3272095-3272143)
chr7 (42-90)||(4318317-4318365)
chr7 (175-223)||(9389332-9389380)
chr7 (52-88)||(9389466-9389502)
chr7 (52-88)||(9751320-9751356)
chr7 (182-242)||(12318543-12318603)
chr7 (52-88)||(34201098-34201134)
[»] scaffold0080 (1 HSPs)
scaffold0080 (6-242)||(18275-18511)
[»] scaffold0324 (1 HSPs)
scaffold0324 (11-242)||(15670-15901)
[»] chr5 (81 HSPs)
chr5 (11-242)||(23201638-23201869)
chr5 (6-242)||(22032580-22032816)
chr5 (11-242)||(23500964-23501195)
chr5 (6-242)||(18769623-18769859)
chr5 (11-242)||(14079417-14079648)
chr5 (27-241)||(37724189-37724403)
chr5 (12-241)||(21366286-21366515)
chr5 (11-239)||(23512376-23512604)
chr5 (11-242)||(20805816-20806047)
chr5 (48-242)||(21887130-21887324)
chr5 (14-167)||(23572351-23572504)
chr5 (30-218)||(26704354-26704542)
chr5 (30-218)||(26974087-26974275)
chr5 (38-241)||(31342399-31342602)
chr5 (33-242)||(17410724-17410923)
chr5 (33-218)||(20910454-20910629)
chr5 (33-219)||(23535242-23535418)
chr5 (34-219)||(24532701-24532876)
chr5 (34-116)||(21340513-21340595)
chr5 (34-116)||(26665877-26665959)
chr5 (34-116)||(26937474-26937556)
chr5 (34-242)||(17918781-17918979)
chr5 (33-116)||(18356604-18356687)
chr5 (34-219)||(16674430-16674605)
chr5 (34-116)||(20232828-20232910)
chr5 (34-222)||(12028215-12028393)
chr5 (34-117)||(18774482-18774565)
chr5 (34-117)||(42805698-42805781)
chr5 (38-116)||(17718185-17718263)
chr5 (20-106)||(23451621-23451707)
chr5 (20-106)||(23458865-23458951)
chr5 (20-106)||(23463126-23463212)
chr5 (35-117)||(25229151-25229233)
chr5 (35-117)||(25293307-25293389)
chr5 (17-106)||(1858732-1858821)
chr5 (35-116)||(21884935-21885016)
chr5 (38-222)||(24222170-24222344)
chr5 (34-242)||(26742376-26742574)
chr5 (50-117)||(18784341-18784408)
chr5 (35-116)||(4036499-4036580)
chr5 (35-116)||(26172743-26172824)
chr5 (34-221)||(26680868-26681045)
chr5 (34-221)||(26952475-26952652)
chr5 (35-116)||(19472465-19472546)
chr5 (11-88)||(21873518-21873595)
chr5 (34-97)||(123070-123133)
chr5 (35-96)||(20296127-20296188)
chr5 (47-116)||(21295009-21295078)
chr5 (47-116)||(25535279-25535348)
chr5 (34-78)||(22757414-22757458)
chr5 (47-96)||(15441720-15441769)
chr5 (193-242)||(23572510-23572559)
chr5 (49-88)||(22119963-22120002)
chr5 (127-242)||(22760026-22760141)
chr5 (47-90)||(23337060-23337103)
chr5 (52-88)||(19660608-19660644)
chr5 (53-88)||(11581016-11581051)
chr5 (53-104)||(22107129-22107180)
chr5 (49-88)||(24767107-24767146)
chr5 (181-223)||(19660474-19660516)
chr5 (182-219)||(4036636-4036673)
chr5 (182-219)||(17718092-17718129)
chr5 (182-219)||(18356743-18356780)
chr5 (182-219)||(18784463-18784500)
chr5 (177-218)||(19669338-19669379)
chr5 (181-222)||(21292619-21292660)
chr5 (182-219)||(21340420-21340457)
chr5 (182-219)||(21482894-21482931)
chr5 (182-219)||(21884842-21884879)
chr5 (181-242)||(22119811-22119872)
chr5 (182-219)||(25229059-25229096)
chr5 (182-219)||(25293215-25293252)
chr5 (182-219)||(26172880-26172917)
chr5 (182-219)||(26665784-26665821)
chr5 (182-219)||(26937381-26937418)
chr5 (182-219)||(33409622-33409659)
chr5 (182-219)||(42805836-42805873)
chr5 (52-88)||(5888946-5888982)
chr5 (52-88)||(21565858-21565894)
chr5 (52-88)||(22959304-22959340)
chr5 (52-88)||(25744035-25744071)
[»] scaffold0215 (1 HSPs)
scaffold0215 (12-241)||(27093-27322)
[»] chr8 (72 HSPs)
chr8 (11-239)||(19899364-19899592)
chr8 (6-242)||(20465658-20465894)
chr8 (6-242)||(377542-377778)
chr8 (11-242)||(16184997-16185228)
chr8 (27-242)||(17353556-17353771)
chr8 (11-242)||(21168340-21168571)
chr8 (17-242)||(22010298-22010523)
chr8 (31-242)||(23776452-23776664)
chr8 (12-242)||(30642910-30643140)
chr8 (25-242)||(24756004-24756221)
chr8 (12-242)||(15602636-15602866)
chr8 (12-242)||(15611088-15611318)
chr8 (16-242)||(19259221-19259446)
chr8 (11-242)||(19976714-19976947)
chr8 (11-242)||(19983362-19983595)
chr8 (27-222)||(21389091-21389286)
chr8 (12-213)||(17926355-17926556)
chr8 (11-241)||(16409875-16410105)
chr8 (27-213)||(21395630-21395816)
chr8 (27-213)||(21790123-21790309)
chr8 (34-218)||(20856068-20856252)
chr8 (17-242)||(16860956-16861171)
chr8 (66-242)||(16411888-16412064)
chr8 (34-116)||(15538726-15538808)
chr8 (34-116)||(24433983-24434065)
chr8 (17-219)||(39094594-39094786)
chr8 (34-116)||(15532166-15532248)
chr8 (33-242)||(16231105-16231304)
chr8 (34-109)||(17828336-17828411)
chr8 (33-116)||(22028834-22028917)
chr8 (33-116)||(23834450-23834533)
chr8 (34-116)||(30308500-30308582)
chr8 (35-116)||(22113474-22113555)
chr8 (35-116)||(22134977-22135058)
chr8 (35-116)||(23846761-23846842)
chr8 (34-116)||(18619756-18619838)
chr8 (11-81)||(21161838-21161908)
chr8 (35-116)||(22166127-22166208)
chr8 (36-116)||(22045138-22045218)
chr8 (142-241)||(21161735-21161834)
chr8 (35-96)||(43252092-43252153)
chr8 (37-96)||(17055155-17055214)
chr8 (37-96)||(32598959-32599018)
chr8 (37-96)||(32605491-32605550)
chr8 (47-116)||(20527740-20527809)
chr8 (181-241)||(25362770-25362830)
chr8 (35-96)||(21972350-21972411)
chr8 (35-96)||(21976435-21976496)
chr8 (35-96)||(19278050-19278110)
chr8 (53-104)||(21918756-21918807)
chr8 (182-241)||(23252393-23252452)
chr8 (51-88)||(21249695-21249732)
chr8 (52-88)||(5866047-5866083)
chr8 (52-88)||(17141228-17141264)
chr8 (182-242)||(22028973-22029033)
chr8 (182-242)||(22045274-22045334)
chr8 (53-105)||(41598499-41598551)
chr8 (191-242)||(22057773-22057824)
chr8 (57-104)||(25362896-25362943)
chr8 (181-222)||(5865915-5865956)
chr8 (182-219)||(15532304-15532341)
chr8 (182-219)||(15538864-15538901)
chr8 (51-88)||(21255533-21255570)
chr8 (182-219)||(22113381-22113418)
chr8 (182-219)||(22134884-22134921)
chr8 (182-219)||(22166034-22166071)
chr8 (182-219)||(23834589-23834626)
chr8 (182-219)||(24433890-24433927)
chr8 (182-219)||(32599094-32599131)
chr8 (182-219)||(32605626-32605663)
chr8 (53-105)||(22875380-22875432)
chr8 (52-88)||(39834146-39834182)
[»] chr4 (78 HSPs)
chr4 (27-242)||(13569797-13570012)
chr4 (27-242)||(15124773-15124988)
chr4 (11-242)||(15094042-15094273)
chr4 (11-242)||(44675901-44676132)
chr4 (25-242)||(12570304-12570521)
chr4 (11-242)||(15121422-15121653)
chr4 (12-242)||(16356572-16356802)
chr4 (11-242)||(23843747-23843979)
chr4 (12-242)||(16487697-16487927)
chr4 (33-242)||(36133592-36133791)
chr4 (83-242)||(16348311-16348470)
chr4 (36-116)||(19757347-19757427)
chr4 (36-116)||(19782379-19782459)
chr4 (34-116)||(17152233-17152315)
chr4 (34-219)||(18237170-18237345)
chr4 (34-116)||(23139548-23139630)
chr4 (34-116)||(26243411-26243493)
chr4 (34-116)||(45938425-45938507)
chr4 (36-116)||(16678335-16678415)
chr4 (35-116)||(9556809-9556890)
chr4 (34-222)||(11250211-11250389)
chr4 (21-221)||(15352957-15353147)
chr4 (33-109)||(1951514-1951590)
chr4 (38-116)||(3413078-3413156)
chr4 (42-116)||(16243146-16243220)
chr4 (35-239)||(2015057-2015251)
chr4 (38-222)||(16351498-16351672)
chr4 (35-116)||(18222124-18222205)
chr4 (33-96)||(43255927-43255990)
chr4 (34-116)||(9530711-9530793)
chr4 (38-222)||(25555798-25555972)
chr4 (35-116)||(28569190-28569271)
chr4 (38-116)||(18602491-18602569)
chr4 (34-96)||(27534303-27534365)
chr4 (35-96)||(4561099-4561160)
chr4 (35-96)||(5756703-5756764)
chr4 (181-242)||(17047702-17047763)
chr4 (47-116)||(18609085-18609154)
chr4 (35-96)||(33742657-33742718)
chr4 (51-96)||(14708400-14708445)
chr4 (47-116)||(23838724-23838793)
chr4 (37-96)||(42997216-42997275)
chr4 (47-96)||(14679253-14679302)
chr4 (47-96)||(14685462-14685511)
chr4 (47-116)||(41385491-41385560)
chr4 (47-116)||(35614230-35614298)
chr4 (48-88)||(22633983-22634023)
chr4 (49-88)||(3332197-3332236)
chr4 (53-104)||(7089191-7089242)
chr4 (49-88)||(13812579-13812618)
chr4 (53-104)||(17047828-17047879)
chr4 (49-88)||(24029053-24029092)
chr4 (177-218)||(13812451-13812492)
chr4 (181-218)||(24029183-24029220)
chr4 (44-96)||(12522372-12522424)
chr4 (48-88)||(12774309-12774349)
chr4 (53-104)||(3096957-3097008)
chr4 (52-91)||(15190631-15190670)
chr4 (49-88)||(20157060-20157099)
chr4 (53-88)||(44102525-44102560)
chr4 (53-88)||(44928694-44928729)
chr4 (182-219)||(1951414-1951451)
chr4 (177-218)||(13844977-13845018)
chr4 (181-222)||(14052951-14052992)
chr4 (182-219)||(14708287-14708324)
chr4 (182-219)||(16243053-16243090)
chr4 (182-219)||(18222031-18222068)
chr4 (182-219)||(23139686-23139723)
chr4 (182-219)||(26243318-26243355)
chr4 (182-223)||(27534441-27534482)
chr4 (182-219)||(28569097-28569134)
chr4 (182-219)||(43255813-43255850)
chr4 (182-219)||(45938563-45938600)
chr4 (52-88)||(8846688-8846724)
chr4 (52-88)||(15099664-15099700)
chr4 (186-222)||(17053478-17053514)
chr4 (53-93)||(21815068-21815108)
chr4 (53-93)||(21818490-21818530)
[»] chr1 (50 HSPs)
chr1 (11-242)||(42864830-42865061)
chr1 (11-242)||(22830997-22831228)
chr1 (27-218)||(21714835-21715026)
chr1 (25-238)||(21787665-21787878)
chr1 (11-239)||(18181743-18181971)
chr1 (6-242)||(21022902-21023138)
chr1 (27-218)||(22468339-22468530)
chr1 (11-234)||(6152124-6152347)
chr1 (32-242)||(3472545-3472755)
chr1 (46-242)||(22432402-22432598)
chr1 (33-242)||(36818938-36819137)
chr1 (34-214)||(8761280-8761460)
chr1 (33-242)||(21305591-21305790)
chr1 (34-219)||(12647147-12647322)
chr1 (17-106)||(17678343-17678432)
chr1 (13-90)||(22449037-22449114)
chr1 (33-109)||(16080197-16080273)
chr1 (34-221)||(45489394-45489571)
chr1 (35-241)||(20228440-20228636)
chr1 (33-219)||(33797810-33797986)
chr1 (34-219)||(18882645-18882820)
chr1 (33-242)||(24782730-24782929)
chr1 (34-116)||(46975745-46975827)
chr1 (33-219)||(19212144-19212320)
chr1 (35-109)||(23819052-23819126)
chr1 (37-116)||(20138364-20138443)
chr1 (11-105)||(20091229-20091323)
chr1 (34-222)||(45310016-45310194)
chr1 (37-96)||(21615718-21615777)
chr1 (35-96)||(16375223-16375284)
chr1 (34-222)||(18393613-18393791)
chr1 (35-96)||(21407635-21407696)
chr1 (35-96)||(52639821-52639882)
chr1 (38-116)||(33049833-33049911)
chr1 (47-116)||(21438085-21438154)
chr1 (47-116)||(23763502-23763571)
chr1 (51-91)||(21162078-21162118)
chr1 (53-105)||(433322-433374)
chr1 (52-88)||(20918916-20918952)
chr1 (48-88)||(21754346-21754386)
chr1 (181-221)||(38801041-38801081)
chr1 (54-88)||(33681325-33681359)
chr1 (47-116)||(19063811-19063880)
chr1 (47-116)||(19111701-19111770)
chr1 (182-219)||(20138499-20138536)
chr1 (182-219)||(21615853-21615890)
chr1 (181-222)||(21754477-21754518)
chr1 (182-242)||(16080074-16080134)
chr1 (52-88)||(20637164-20637200)
chr1 (53-105)||(50209967-50210019)
[»] chr3 (94 HSPs)
chr3 (6-242)||(856399-856635)
chr3 (6-242)||(16369671-16369907)
chr3 (11-242)||(12173054-12173285)
chr3 (11-242)||(15060560-15060791)
chr3 (12-242)||(12496524-12496754)
chr3 (11-242)||(15051784-15052015)
chr3 (27-218)||(15877471-15877662)
chr3 (12-242)||(18383536-18383766)
chr3 (14-242)||(322860-323088)
chr3 (22-238)||(26190632-26190848)
chr3 (11-242)||(14878124-14878355)
chr3 (12-242)||(11298148-11298378)
chr3 (17-218)||(12037596-12037797)
chr3 (11-218)||(23408701-23408907)
chr3 (12-242)||(19725531-19725761)
chr3 (11-242)||(23077097-23077328)
chr3 (21-242)||(23052696-23052917)
chr3 (12-239)||(11851842-11852067)
chr3 (86-241)||(17524794-17524949)
chr3 (86-241)||(321634-321789)
chr3 (34-242)||(326794-326992)
chr3 (12-168)||(11863060-11863215)
chr3 (6-98)||(16910013-16910105)
chr3 (33-242)||(7792976-7793175)
chr3 (33-242)||(15482939-15483138)
chr3 (33-238)||(15849719-15849914)
chr3 (33-242)||(20461130-20461329)
chr3 (36-222)||(1982460-1982636)
chr3 (34-116)||(1598226-1598308)
chr3 (34-219)||(17242250-17242425)
chr3 (33-242)||(31097184-31097383)
chr3 (34-116)||(38814662-38814744)
chr3 (33-116)||(16797800-16797883)
chr3 (40-242)||(3402585-3402777)
chr3 (33-116)||(16808627-16808710)
chr3 (34-108)||(15941658-15941732)
chr3 (34-222)||(11594789-11594967)
chr3 (34-219)||(3833952-3834127)
chr3 (34-116)||(11300257-11300339)
chr3 (33-116)||(2897569-2897652)
chr3 (34-116)||(42326222-42326304)
chr3 (35-116)||(16697071-16697152)
chr3 (35-116)||(16690498-16690579)
chr3 (47-116)||(20723292-20723361)
chr3 (35-96)||(7109981-7110042)
chr3 (35-96)||(7113916-7113977)
chr3 (35-108)||(11855015-11855088)
chr3 (35-96)||(22337002-22337063)
chr3 (35-96)||(27409409-27409470)
chr3 (38-114)||(11557132-11557208)
chr3 (35-96)||(15617656-15617717)
chr3 (47-96)||(22321959-22322008)
chr3 (47-116)||(24188068-24188137)
chr3 (34-116)||(55149256-55149338)
chr3 (35-96)||(28950007-28950068)
chr3 (63-116)||(16862926-16862979)
chr3 (127-218)||(3389600-3389691)
chr3 (49-88)||(12340064-12340103)
chr3 (47-93)||(839537-839583)
chr3 (17-78)||(3389719-3389780)
chr3 (47-88)||(28350935-28350976)
chr3 (48-88)||(1644453-1644493)
chr3 (48-88)||(12852134-12852174)
chr3 (48-88)||(13210098-13210138)
chr3 (182-222)||(16690635-16690675)
chr3 (182-222)||(16697208-16697248)
chr3 (53-105)||(17248040-17248092)
chr3 (177-217)||(30030266-30030306)
chr3 (48-88)||(32307979-32308019)
chr3 (48-88)||(49667854-49667894)
chr3 (49-88)||(14665917-14665956)
chr3 (49-88)||(14669072-14669111)
chr3 (49-88)||(14735430-14735469)
chr3 (11-62)||(17524951-17525002)
chr3 (53-104)||(20698192-20698243)
chr3 (53-104)||(26687201-26687252)
chr3 (53-88)||(30030153-30030188)
chr3 (177-223)||(20698084-20698130)
chr3 (181-218)||(4588457-4588494)
chr3 (51-96)||(7986001-7986046)
chr3 (181-218)||(12340194-12340231)
chr3 (181-222)||(13209966-13210007)
chr3 (181-222)||(14179764-14179805)
chr3 (181-218)||(14666047-14666084)
chr3 (181-218)||(14669202-14669239)
chr3 (181-218)||(14735560-14735597)
chr3 (182-219)||(15941557-15941594)
chr3 (182-219)||(16797707-16797744)
chr3 (63-104)||(16809724-16809765)
chr3 (181-242)||(17674194-17674255)
chr3 (182-219)||(38814800-38814837)
chr3 (128-220)||(11557037-11557129)
chr3 (48-88)||(12934081-12934121)
chr3 (34-90)||(14499606-14499662)
[»] scaffold0029 (3 HSPs)
scaffold0029 (16-242)||(13032-13258)
scaffold0029 (35-96)||(61378-61439)
scaffold0029 (42-96)||(65294-65348)
[»] scaffold1124 (1 HSPs)
scaffold1124 (6-242)||(2140-2376)
[»] scaffold0671 (1 HSPs)
scaffold0671 (11-242)||(6372-6603)
[»] scaffold0615 (1 HSPs)
scaffold0615 (11-242)||(1703-1934)
[»] scaffold0311 (1 HSPs)
scaffold0311 (11-242)||(6697-6928)
[»] scaffold0042 (6 HSPs)
scaffold0042 (25-242)||(34529-34746)
scaffold0042 (11-233)||(41181-41403)
scaffold0042 (34-116)||(64131-64213)
scaffold0042 (34-116)||(76015-76097)
scaffold0042 (182-219)||(64269-64306)
scaffold0042 (182-219)||(76153-76190)
[»] scaffold0131 (1 HSPs)
scaffold0131 (27-218)||(36743-36934)
[»] scaffold0101 (1 HSPs)
scaffold0101 (27-242)||(8576-8791)
[»] scaffold0004 (3 HSPs)
scaffold0004 (11-218)||(70065-70272)
scaffold0004 (33-242)||(10214-10413)
scaffold0004 (47-116)||(58164-58233)
[»] scaffold0393 (1 HSPs)
scaffold0393 (12-242)||(1760-1990)
[»] scaffold0676 (1 HSPs)
scaffold0676 (11-242)||(4696-4927)
[»] scaffold0158 (2 HSPs)
scaffold0158 (11-242)||(3108-3339)
scaffold0158 (11-242)||(6774-7005)
[»] chr6 (79 HSPs)
chr6 (11-242)||(21739641-21739872)
chr6 (11-223)||(22432521-22432733)
chr6 (11-218)||(19863249-19863456)
chr6 (11-223)||(22439071-22439283)
chr6 (27-242)||(25641802-25642017)
chr6 (12-242)||(21834509-21834739)
chr6 (12-242)||(16523022-16523252)
chr6 (11-242)||(18907377-18907609)
chr6 (17-208)||(22059396-22059587)
chr6 (17-218)||(18180764-18180965)
chr6 (27-242)||(15041169-15041384)
chr6 (33-242)||(17804474-17804673)
chr6 (33-242)||(22429660-22429859)
chr6 (11-214)||(16964957-16965160)
chr6 (53-217)||(22405709-22405873)
chr6 (34-219)||(5616467-5616642)
chr6 (34-116)||(12496586-12496668)
chr6 (11-103)||(19873391-19873483)
chr6 (27-214)||(16924526-16924713)
chr6 (34-116)||(12706966-12707048)
chr6 (33-218)||(27415596-27415771)
chr6 (35-116)||(1587477-1587558)
chr6 (34-116)||(18955509-18955591)
chr6 (34-219)||(19663046-19663221)
chr6 (38-116)||(22592550-22592628)
chr6 (34-242)||(1644983-1645181)
chr6 (34-98)||(16741484-16741548)
chr6 (33-116)||(25766914-25766997)
chr6 (38-222)||(19790429-19790603)
chr6 (34-222)||(23657070-23657248)
chr6 (35-116)||(27567355-27567436)
chr6 (38-109)||(20803306-20803377)
chr6 (37-116)||(21702568-21702647)
chr6 (34-116)||(14472548-14472630)
chr6 (21-222)||(20907631-20907822)
chr6 (11-105)||(22334647-22334741)
chr6 (35-116)||(18917012-18917093)
chr6 (34-214)||(27553265-27553435)
chr6 (35-242)||(9481923-9482120)
chr6 (25-105)||(15894185-15894265)
chr6 (34-214)||(16929242-16929421)
chr6 (34-96)||(22863224-22863286)
chr6 (42-96)||(25135438-25135492)
chr6 (35-96)||(8244140-8244201)
chr6 (35-96)||(11567142-11567203)
chr6 (35-96)||(19870870-19870931)
chr6 (35-96)||(23395348-23395409)
chr6 (35-96)||(12618610-12618671)
chr6 (35-96)||(23990200-23990261)
chr6 (27-97)||(31164611-31164681)
chr6 (52-104)||(18821575-18821627)
chr6 (182-242)||(20803182-20803242)
chr6 (49-88)||(21939695-21939734)
chr6 (47-94)||(25928588-25928635)
chr6 (33-102)||(25603143-25603212)
chr6 (33-102)||(25611481-25611550)
chr6 (48-105)||(29808638-29808695)
chr6 (17-57)||(22408110-22408150)
chr6 (182-242)||(25766798-25766858)
chr6 (48-88)||(28496244-28496284)
chr6 (53-104)||(20360716-20360767)
chr6 (52-91)||(31155166-31155205)
chr6 (82-116)||(2685087-2685121)
chr6 (180-222)||(22831932-22831974)
chr6 (53-91)||(25629123-25629161)
chr6 (47-93)||(34369742-34369788)
chr6 (181-222)||(1561745-1561786)
chr6 (182-219)||(1587384-1587421)
chr6 (182-219)||(2684994-2685031)
chr6 (182-219)||(12707104-12707141)
chr6 (181-218)||(15894072-15894109)
chr6 (182-219)||(16741623-16741660)
chr6 (181-222)||(16920282-16920323)
chr6 (182-219)||(21702703-21702740)
chr6 (181-218)||(25611365-25611402)
chr6 (52-88)||(4185594-4185630)
chr6 (52-88)||(4667984-4668020)
chr6 (52-88)||(22080508-22080544)
chr6 (181-217)||(22334525-22334561)
[»] scaffold0056 (1 HSPs)
scaffold0056 (25-242)||(13696-13913)
[»] scaffold0102 (2 HSPs)
scaffold0102 (11-218)||(48103-48310)
scaffold0102 (54-88)||(19582-19616)
[»] scaffold0043 (2 HSPs)
scaffold0043 (27-242)||(18525-18740)
scaffold0043 (35-116)||(76917-76998)
[»] scaffold0111 (2 HSPs)
scaffold0111 (27-209)||(32719-32901)
scaffold0111 (35-96)||(8778-8839)
[»] scaffold0114 (1 HSPs)
scaffold0114 (16-241)||(7564-7789)
[»] scaffold0297 (2 HSPs)
scaffold0297 (11-242)||(15298-15519)
scaffold0297 (129-242)||(10440-10553)
[»] scaffold0139 (1 HSPs)
scaffold0139 (27-223)||(20268-20464)
[»] scaffold0096 (1 HSPs)
scaffold0096 (11-242)||(15968-16199)
[»] scaffold0081 (3 HSPs)
scaffold0081 (27-242)||(14957-15171)
scaffold0081 (27-242)||(23972-24189)
scaffold0081 (27-242)||(39396-39613)
[»] scaffold0023 (2 HSPs)
scaffold0023 (25-240)||(23288-23503)
scaffold0023 (72-242)||(38119-38289)
[»] scaffold1296 (1 HSPs)
scaffold1296 (12-241)||(660-889)
[»] scaffold0031 (2 HSPs)
scaffold0031 (14-242)||(65412-65640)
scaffold0031 (33-242)||(53842-54041)
[»] scaffold0174 (1 HSPs)
scaffold0174 (27-242)||(18072-18287)
[»] scaffold0476 (2 HSPs)
scaffold0476 (32-241)||(5872-6081)
scaffold0476 (32-241)||(7067-7276)
[»] scaffold0425 (1 HSPs)
scaffold0425 (30-242)||(445-657)
[»] scaffold0261 (2 HSPs)
scaffold0261 (11-247)||(1609-1845)
scaffold0261 (52-88)||(15973-16009)
[»] scaffold0367 (1 HSPs)
scaffold0367 (11-242)||(1162-1393)
[»] scaffold0216 (1 HSPs)
scaffold0216 (23-242)||(16740-16959)
[»] scaffold0035 (1 HSPs)
scaffold0035 (11-242)||(46346-46577)
[»] scaffold0021 (2 HSPs)
scaffold0021 (27-218)||(175052-175243)
scaffold0021 (53-104)||(124899-124950)
[»] scaffold0761 (1 HSPs)
scaffold0761 (20-218)||(5952-6150)
[»] scaffold0412 (1 HSPs)
scaffold0412 (30-239)||(6038-6247)
[»] scaffold0198 (1 HSPs)
scaffold0198 (47-218)||(26706-26877)
[»] scaffold1895 (2 HSPs)
scaffold1895 (72-242)||(867-1037)
scaffold1895 (11-57)||(1031-1077)
[»] scaffold0037 (2 HSPs)
scaffold0037 (12-242)||(21188-21418)
scaffold0037 (51-88)||(80102-80139)
[»] scaffold0008 (3 HSPs)
scaffold0008 (17-242)||(30364-30589)
scaffold0008 (37-96)||(2157-2216)
scaffold0008 (182-219)||(2292-2329)
[»] scaffold0149 (4 HSPs)
scaffold0149 (12-168)||(4011-4167)
scaffold0149 (12-168)||(8442-8598)
scaffold0149 (204-242)||(4181-4219)
scaffold0149 (204-242)||(8612-8650)
[»] scaffold0220 (1 HSPs)
scaffold0220 (27-242)||(4552-4767)
[»] scaffold0017 (5 HSPs)
scaffold0017 (40-225)||(190917-191102)
scaffold0017 (33-225)||(192620-192812)
scaffold0017 (35-116)||(56376-56457)
scaffold0017 (129-222)||(14963-15056)
scaffold0017 (129-222)||(19485-19578)
[»] scaffold0327 (1 HSPs)
scaffold0327 (32-242)||(566-766)
[»] scaffold0346 (1 HSPs)
scaffold0346 (21-149)||(15362-15490)
[»] scaffold0104 (2 HSPs)
scaffold0104 (12-242)||(2096-2325)
scaffold0104 (12-242)||(9778-10007)
[»] scaffold0020 (1 HSPs)
scaffold0020 (64-218)||(178974-179128)
[»] scaffold1326 (1 HSPs)
scaffold1326 (23-242)||(1119-1328)
[»] scaffold0228 (4 HSPs)
scaffold0228 (33-242)||(18262-18461)
scaffold0228 (53-105)||(4822-4874)
scaffold0228 (53-105)||(12404-12456)
scaffold0228 (53-105)||(22356-22408)
[»] scaffold0044 (3 HSPs)
scaffold0044 (33-242)||(19465-19664)
scaffold0044 (33-116)||(13181-13264)
scaffold0044 (37-96)||(62541-62600)
[»] scaffold0036 (2 HSPs)
scaffold0036 (33-242)||(66045-66244)
scaffold0036 (75-242)||(71186-71343)
[»] scaffold0280 (1 HSPs)
scaffold0280 (17-218)||(18945-19136)
[»] scaffold0070 (1 HSPs)
scaffold0070 (34-219)||(10181-10356)
[»] scaffold0001 (2 HSPs)
scaffold0001 (33-242)||(173567-173766)
scaffold0001 (34-108)||(422285-422359)
[»] scaffold0171 (1 HSPs)
scaffold0171 (34-242)||(35140-35338)
[»] scaffold0120 (3 HSPs)
scaffold0120 (34-242)||(19647-19845)
scaffold0120 (177-218)||(32601-32642)
scaffold0120 (177-218)||(46363-46404)
[»] scaffold0079 (1 HSPs)
scaffold0079 (83-242)||(44391-44550)
[»] scaffold0009 (1 HSPs)
scaffold0009 (33-116)||(228119-228202)
[»] scaffold0003 (5 HSPs)
scaffold0003 (33-116)||(96883-96966)
scaffold0003 (33-218)||(71590-71765)
scaffold0003 (34-219)||(139988-140163)
scaffold0003 (21-109)||(413803-413891)
scaffold0003 (53-105)||(339705-339757)
[»] scaffold1461 (2 HSPs)
scaffold1461 (34-116)||(207-289)
scaffold1461 (182-219)||(345-382)
[»] scaffold0483 (1 HSPs)
scaffold0483 (17-242)||(592-807)
[»] scaffold0132 (2 HSPs)
scaffold0132 (34-116)||(36583-36665)
scaffold0132 (182-218)||(36721-36757)
[»] scaffold0109 (6 HSPs)
scaffold0109 (17-242)||(45379-45594)
scaffold0109 (34-108)||(7222-7296)
scaffold0109 (35-117)||(38564-38646)
scaffold0109 (47-96)||(11068-11117)
scaffold0109 (182-219)||(10955-10992)
scaffold0109 (182-219)||(38472-38509)
[»] scaffold0107 (1 HSPs)
scaffold0107 (33-218)||(15072-15247)
[»] scaffold0193 (2 HSPs)
scaffold0193 (37-116)||(9701-9780)
scaffold0193 (182-219)||(9836-9873)
[»] scaffold0013 (3 HSPs)
scaffold0013 (33-116)||(2419-2502)
scaffold0013 (47-96)||(9631-9680)
scaffold0013 (192-241)||(2304-2353)
[»] scaffold0012 (1 HSPs)
scaffold0012 (34-116)||(24714-24796)
[»] scaffold1220 (2 HSPs)
scaffold1220 (22-98)||(2068-2144)
scaffold1220 (130-242)||(2165-2277)
[»] scaffold0177 (1 HSPs)
scaffold0177 (33-109)||(13240-13316)
[»] scaffold0168 (1 HSPs)
scaffold0168 (33-109)||(3283-3359)
[»] scaffold0064 (2 HSPs)
scaffold0064 (126-242)||(64282-64398)
scaffold0064 (177-222)||(47413-47458)
[»] scaffold0410 (1 HSPs)
scaffold0410 (34-116)||(11658-11740)
[»] scaffold0130 (1 HSPs)
scaffold0130 (34-116)||(5746-5828)
[»] scaffold0010 (4 HSPs)
scaffold0010 (34-116)||(23494-23576)
scaffold0010 (47-116)||(242348-242417)
scaffold0010 (52-88)||(130221-130257)
scaffold0010 (182-219)||(23632-23669)
[»] scaffold0585 (1 HSPs)
scaffold0585 (35-116)||(9613-9694)
[»] scaffold1552 (1 HSPs)
scaffold1552 (38-116)||(635-713)
[»] scaffold0439 (3 HSPs)
scaffold0439 (34-223)||(2084-2263)
scaffold0439 (34-96)||(10061-10123)
scaffold0439 (127-223)||(9944-10040)
[»] scaffold0184 (1 HSPs)
scaffold0184 (34-222)||(3874-4052)
[»] scaffold0284 (1 HSPs)
scaffold0284 (35-242)||(18633-18830)
[»] scaffold0028 (2 HSPs)
scaffold0028 (35-96)||(58484-58545)
scaffold0028 (48-88)||(132963-133003)
[»] scaffold0167 (1 HSPs)
scaffold0167 (147-218)||(36034-36105)
[»] scaffold0637 (1 HSPs)
scaffold0637 (34-116)||(8849-8931)
[»] scaffold0555 (2 HSPs)
scaffold0555 (11-105)||(851-945)
scaffold0555 (181-222)||(1021-1062)
[»] scaffold0546 (3 HSPs)
scaffold0546 (34-108)||(6011-6085)
scaffold0546 (47-96)||(2190-2239)
scaffold0546 (182-219)||(2315-2352)
[»] scaffold0015 (1 HSPs)
scaffold0015 (17-222)||(191966-192161)
[»] scaffold0372 (1 HSPs)
scaffold0372 (35-96)||(4867-4928)
[»] scaffold0371 (2 HSPs)
scaffold0371 (37-117)||(15618-15698)
scaffold0371 (182-219)||(15759-15796)
[»] scaffold0342 (1 HSPs)
scaffold0342 (34-90)||(7042-7098)
[»] scaffold0334 (2 HSPs)
scaffold0334 (42-116)||(18106-18180)
scaffold0334 (182-219)||(18013-18050)
[»] scaffold0484 (1 HSPs)
scaffold0484 (181-242)||(1345-1406)
[»] scaffold0165 (4 HSPs)
scaffold0165 (181-242)||(3912-3973)
scaffold0165 (181-242)||(7976-8037)
scaffold0165 (53-104)||(3795-3846)
scaffold0165 (53-104)||(7859-7910)
[»] scaffold0034 (1 HSPs)
scaffold0034 (37-96)||(16429-16488)
[»] scaffold0138 (1 HSPs)
scaffold0138 (47-96)||(29973-30022)
[»] scaffold0259 (1 HSPs)
scaffold0259 (47-96)||(10468-10517)
[»] scaffold0233 (1 HSPs)
scaffold0233 (47-96)||(14306-14355)
[»] scaffold0192 (2 HSPs)
scaffold0192 (48-88)||(10221-10261)
scaffold0192 (181-218)||(10352-10389)
[»] scaffold0124 (1 HSPs)
scaffold0124 (48-88)||(24421-24461)
[»] scaffold1048 (1 HSPs)
scaffold1048 (127-222)||(1798-1893)
[»] scaffold0347 (1 HSPs)
scaffold0347 (49-88)||(340-379)
[»] scaffold0075 (2 HSPs)
scaffold0075 (49-88)||(8064-8103)
scaffold0075 (181-218)||(7936-7973)
[»] scaffold0016 (2 HSPs)
scaffold0016 (49-88)||(207289-207328)
scaffold0016 (181-219)||(207160-207198)
[»] scaffold0718 (1 HSPs)
scaffold0718 (181-222)||(4780-4821)
[»] scaffold0490 (1 HSPs)
scaffold0490 (181-222)||(2383-2424)
[»] scaffold0256 (1 HSPs)
scaffold0256 (43-96)||(24741-24794)
[»] scaffold0405 (1 HSPs)
scaffold0405 (182-242)||(9322-9382)
[»] scaffold0358 (2 HSPs)
scaffold0358 (56-104)||(253-301)
scaffold0358 (56-104)||(5029-5077)
[»] scaffold0309 (1 HSPs)
scaffold0309 (181-221)||(7041-7081)
[»] scaffold0305 (1 HSPs)
scaffold0305 (52-104)||(20716-20768)
[»] scaffold0211 (1 HSPs)
scaffold0211 (48-88)||(28580-28620)
[»] scaffold0161 (1 HSPs)
scaffold0161 (52-88)||(2215-2251)
[»] scaffold0142 (2 HSPs)
scaffold0142 (48-88)||(7541-7581)
scaffold0142 (53-88)||(17095-17130)
[»] scaffold0026 (2 HSPs)
scaffold0026 (52-88)||(59273-59309)
scaffold0026 (55-91)||(40173-40209)
[»] scaffold1984 (1 HSPs)
scaffold1984 (53-88)||(445-480)
[»] scaffold1842 (1 HSPs)
scaffold1842 (53-104)||(805-856)
[»] scaffold0451 (1 HSPs)
scaffold0451 (191-242)||(11430-11481)
[»] scaffold0292 (1 HSPs)
scaffold0292 (53-104)||(3784-3835)
[»] scaffold0221 (1 HSPs)
scaffold0221 (49-88)||(12579-12618)
[»] scaffold0217 (1 HSPs)
scaffold0217 (53-88)||(16371-16406)
[»] scaffold0175 (3 HSPs)
scaffold0175 (53-104)||(13406-13457)
scaffold0175 (54-88)||(34437-34471)
scaffold0175 (181-222)||(34562-34603)
[»] scaffold0166 (1 HSPs)
scaffold0166 (49-88)||(9604-9643)
[»] scaffold0113 (2 HSPs)
scaffold0113 (53-104)||(32378-32429)
scaffold0113 (181-222)||(32495-32536)
[»] scaffold0011 (2 HSPs)
scaffold0011 (53-104)||(52226-52277)
scaffold0011 (53-104)||(167735-167786)
[»] scaffold0839 (1 HSPs)
scaffold0839 (53-86)||(1850-1883)
[»] scaffold0772 (1 HSPs)
scaffold0772 (182-239)||(6432-6489)
[»] scaffold0598 (1 HSPs)
scaffold0598 (181-222)||(701-742)
[»] scaffold0427 (2 HSPs)
scaffold0427 (181-222)||(13926-13967)
scaffold0427 (52-88)||(13808-13844)
[»] scaffold0423 (1 HSPs)
scaffold0423 (181-222)||(10910-10951)
[»] scaffold0285 (1 HSPs)
scaffold0285 (182-219)||(12169-12206)
[»] scaffold0145 (1 HSPs)
scaffold0145 (53-102)||(39075-39124)
[»] scaffold1137 (2 HSPs)
scaffold1137 (182-222)||(1939-1979)
scaffold1137 (48-88)||(2072-2112)
[»] scaffold0628 (1 HSPs)
scaffold0628 (48-88)||(2573-2613)
[»] scaffold0475 (1 HSPs)
scaffold0475 (52-88)||(9390-9426)
[»] scaffold0413 (1 HSPs)
scaffold0413 (53-105)||(15369-15421)
[»] scaffold0349 (1 HSPs)
scaffold0349 (34-90)||(12700-12756)
[»] scaffold0150 (1 HSPs)
scaffold0150 (48-88)||(32393-32433)
[»] scaffold0125 (1 HSPs)
scaffold0125 (52-88)||(45561-45597)


Alignment Details
Target: scaffold0210 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 21661 - 21425
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21661 agcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 21562  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    ||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||| ||    
T  21561 ctaaagttgttctaagctaaaccagattcaatctcgttctaagttatcatttaatctttactatgcatcttcaggcactcaaaaacatctaaggttcaac 21462  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  21461 tcaaaagtcaaaaatacagaattcaacatgctctctg 21425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 29553 - 29317
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29553 agcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 29454  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    ||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||| ||    
T  29453 ctaaagttgttctaagctaaaccagattcaatctcgttctaagttatcatttaatctttactatgcatcttcaggcactcaaaaacatctaaggttcaac 29354  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  29353 tcaaaagtcaaaaatacagaattcaacatgctctctg 29317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 40622057 - 40621827
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40622057 acagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaaag 40621958  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||| ||||||||    
T  40621957 ttgttctaagctataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatccttagacactcaaaaacatctaaggttcaactcaaaa 40621858  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||| ||| ||| ||||||||||||    
T  40621857 gtcaaaaatatagaattcaacatgctctctg 40621827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 45678005 - 45677774
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45678005 cacagatcacaacattctcaattgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaa 45677906  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  45677905 gttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataatcatctttaggcactcaaaaacatctaaggttcaactcaaa 45677806  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| ||||||||||||    
T  45677805 agtcaaaaatacagaattcaacatgctctctg 45677774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 22798976 - 22798769
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || || ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22798976 cacagatcgcaatatcctaacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaa 22798877  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    | |||| ||| ||| |||||||||||||||||||||||||||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  22798876 gctgttctaagctaaaccaggttcaatctcgttctaagttatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 22798777  T
Q  211 agtcaaaa 218  Q
    ||||||||    
T  22798776 agtcaaaa 22798769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 24673845 - 24674076
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| || ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||     
T  24673845 cacagatcgcaacatcctaacttgcattcagttgtggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagccagattcccaactaat 24673944  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| ||||| |||||||||||||||| ||||  |||||  || |||| |||| |||||||||||| |||||||    
T  24673945 gttgttctaagctaaaccaggttcaatctcattctaggttatcatttaatcttcaataaacatcttaaggcacttaaaggcatctaaggttcaactcaaa 24674044  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| ||||||||||||    
T  24674045 agtcaaaaatacagaattcaacatgctctctg 24674076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 37524934 - 37525164
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  37524934 acagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaag 37525033  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||  ||||||||    
T  37525034 ttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggtttaactcaaaa 37525133  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  37525134 gtcaaaattacagaattcaacatgctctctg 37525164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 22740810 - 22740579
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| ||     
T  22740810 cacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagttcaagccagattcccaacaaag 22740711  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||   || || ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||    
T  22740710 gttgttctatgttaaactaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaa 22740611  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    |||| ||| |||| | |  |||||||||||||    
T  22740610 agtccaaactacataatcttacatgctctctg 22740579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 21918165 - 21917935
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  21918165 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaagg 21918066  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    |||||  || ||| |||||||||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||  ||||||||    
T  21918065 ttgttcaaagctaaaccaggttcaatctagttctaagtcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttaaactcaaaa 21917966  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  21917965 gtcaaaattacagaattcaacatgctctctg 21917935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 25963566 - 25963336
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  25963566 acagatcgcaacatactaacttgcattcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaag 25963467  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| ||||||||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  25963466 ttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaa 25963367  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  25963366 gtcaaaattacagaattcaacatgctctctg 25963336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 23019556 - 23019328
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || || |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  23019556 cacagatcgcaatatcctgacttgcactcagttctggaagtgctcgcgaggcgagagcatctactcgccatggcaagtacaagccagattcccaactaaa 23019457  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| ||||| ||||||| |||||||    
T  23019456 gttgttctaacctagaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaacacatcgaaggttcaactcaaa 23019357  T
Q  211 agtcaaaaatacagatttctacatgctct 239  Q
    ||||||| |||||||  |||||| |||||    
T  23019356 agtcaaacatacagaaatctacaagctct 23019328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 22758565 - 22758334
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || |||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||     
T  22758565 cacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaag 22758466  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||   || || ||||| || || ||||||||||||||| ||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||    
T  22758465 gttgttctaggttaaactaggttgaagcttgttctaagttatcatgtaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaa 22758366  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    |||| ||| |||| | |  |||||||||||||    
T  22758365 agtccaaactacataatcttacatgctctctg 22758334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 27 - 218
Target Start/End: Original strand, 23038320 - 23038511
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| |  |||||| ||   || |    
T  23038320 ctcacttgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgggtacaagccagattcccaacaatggttgttctagcttaaa 23038419  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||  |||||||||||||  ||||||||||||||    
T  23038420 ccaggttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaacaacatctaaggttcatctcaaaagtcaaaa 23038511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 44370143 - 44369952
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||||    
T  44370143 tcacgacattctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattcaacctaatgttgtt 44370044  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 208  Q
     ||| ||| |||||||||||||| ||||||| | || || ||||||||||||||||||| ||| |||||||| ||||||||||||| |||||    
T  44370043 ctaagctaaaccaggttcaatcttgttctaaatcattatctaatctttaatatgcatcttcaggcactcaaaaacatctaaggttcaactca 44369952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 218
Target Start/End: Complemental strand, 23101064 - 23100873
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    |||||| ||   || |    
T  23101064 ctcacttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagctagattcccaacagtggttgttctaggttaaa 23100965  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||| ||| |||| ||| |||||| |||||| |||||||||||||||    
T  23100964 ccaggttcaatctcattctaagttatcatttaatttttaataagcatcttcaggcacttaaaaacatctgaggttcaactcaaaagtcaaaa 23100873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 24716372 - 24716188
Alignment:
Q  20 caacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtttta 119  Q
    ||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   | | ||        
T  24716372 caacattctcaattgcactcggctctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac---attggt---- 24716280  T
Q  120 aactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtc 214  Q
       ||| ||||||||||||||||| ||||| ||| | ||||||||||||  |||||  || |||||||| |||||||||||||  ||||||||||    
T  24716279 ---tattccaggttcaatctcgttttaagtcatcctctaatctttaataaacatcttaaggcactcaaaaacatctaaggttcatctcaaaagtc 24716188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 22811713 - 22811553
Alignment:
Q  82 ggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagac 181  Q
    |||||||||||||||||||||||||||| |||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || |    
T  22811713 ggcgagtacaagccagaatcccaactaaggttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggc 22811614  T
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||  || ||||||||| ||||||||||||||| |||| | ||  ||||||||||||    
T  22811613 actcaaaagcacctaaggttcaactcaaaagtcaaaattacaaaatttaacatgctctctg 22811553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 22461018 - 22460936
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22461018 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 22460936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 21327407 - 21327196
Alignment:
Q  21 aacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaa 120  Q
    ||||||||||  | ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| || |||        
T  21327407 aacattctcaaatacactcagttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccagaattcgaactaaggtcgtt---- 21327312  T
Q  121 actataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaat 220  Q
          |||||||| |||| ||||||||| ||| | ||||||||| |   |||||  ||  |||||||  |||||||||||| |||| || |||||||||    
T  21327311 ------ccaggttccatcttgttctaagtcatcctctaatctttagtgaacatctaaaggtactcaaaagcatctaaggttcaactcgaaggtcaaaaat 21327218  T
Q  221 acagatttctacatgctctctg 242  Q
    ||||||||| ||||||||||||    
T  21327217 acagatttcgacatgctctctg 21327196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 21318480 - 21318265
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||||||||  | |||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  21318480 tcacgacattctcaaatacacttagttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccagaattcgaactaaggttgtt 21318381  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
              |||||||| |||| ||||||||| ||| | ||||||||| |   |||||  ||  |||||||  |||||||||||| |||| || |||||    
T  21318380 ----------ccaggttccatcttgttctaagtcatcctctaatctttactgaacatctaaaggtactcaaaagcatctaaggttcaactcgaaggtcaa 21318291  T
Q  217 aaatacagatttctacatgctctctg 242  Q
    ||||||||||||| ||||| ||||||    
T  21318290 aaatacagatttcgacatgatctctg 21318265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 24735680 - 24735879
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  24735680 tgcaatcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 24735769  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||| ||| | ||| | ||||||||| ||  || ||  ||  ||| |||| |||||||||||| ||||||||||||||||  || | ||| ||    
T  24735770 tcaatcttgttataaatcatcctctaatctttagtagacacctaaaggtactgaaaggcatctaaggttcaactcaaaagtcaaaaactcataattcgac 24735869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 15477883 - 15477957
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15477883 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaa 15477957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 18855289 - 18855207
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||    
T  18855289 gcactcagttctggaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgtt 18855207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 23187353 - 23187435
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| ||||||    
T  23187353 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgtt 23187435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 23598616 - 23598791
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| |||||| ||          ||||    
T  23598616 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgttcta----------ggtt 23598705  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  23598706 caatctcgttctaaatcattttctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 23598791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 61094 - 61175
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  61094 cactcagttctggaagtgctcgcgaggcgggagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 61175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 19928329 - 19928248
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  19928329 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccgactaaggttgtt 19928248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 222
Target Start/End: Original strand, 24175093 - 24175267
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 137  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||||||    
T  24175093 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggttcaat 24175182  T
Q  138 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    || ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  24175183 cttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 24175267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 221
Target Start/End: Complemental strand, 24655162 - 24654989
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 137  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||          |||||||||||    
T  24655162 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt----------ccaggttcaat 24655073  T
Q  138 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 221  Q
    || ||||||||| ||| | ||||||||||||  || |   || ||||||||  |||||||||||| ||||||||||| ||||||    
T  24655072 cttgttctaagtcatcctctaatctttaatacacaacgaaaggcactcaaaagcatctaaggttcaactcaaaagtccaaaata 24654989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 219
Target Start/End: Original strand, 40428736 - 40428929
Alignment:
Q  17 tcacaacattctcacttgcactcagtt-ctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgt 115  Q
    |||| |||||||||   |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||  |||||| | |||||||| |||||    
T  40428736 tcacgacattctcaaaagcactcagtttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacttgccagatttccaactaaggttgt 40428835  T
Q  116 tttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtca 215  Q
    |          || |||||||||||||||||||| ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| |||||||||||     
T  40428836 t----------ccgggttcaatctcgttctaagtcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcc 40428925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 241
Target Start/End: Original strand, 24658032 - 24658139
Alignment:
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 233  Q
    ||||||| |||||||||||||||||||| ||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||||| ||| |||    
T  24658032 caatctcattctaagttatcatttaatcattaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagaattcaaca 24658131  T
Q  234 tgctctct 241  Q
    ||||||||    
T  24658132 tgctctct 24658139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 19688585 - 19688502
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| | |||||||||||||||||||| | |||||||| ||||||    
T  19688585 tgcactcagttctggaagtgctcgcgatgcgagagcatctgcttgtcatggcgagtacaagccagatttccaactaaggttgtt 19688502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 25961358 - 25961287
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||    
T  25961358 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaa 25961287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 12901339 - 12901278
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12901339 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 12901278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 24649636 - 24649697
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24649636 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 24649697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 222
Target Start/End: Original strand, 24870173 - 24870347
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 137  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||          | |||||||||    
T  24870173 tcagttctggaagtgctcatgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt----------ctaggttcaat 24870262  T
Q  138 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    || ||||||| | ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  24870263 cttgttctaaatcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 24870347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 27379259 - 27379198
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27379259 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 27379198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 27383305 - 27383244
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27383305 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 27383244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 27602076 - 27602137
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27602076 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 27602137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 26125484 - 26125543
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26125484 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcca 26125543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 41667230 - 41667289
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41667230 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcca 41667289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 24628305 - 24628244
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24628305 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 24628244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 41530836 - 41530775
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  41530836 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacatgcca 41530775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 22811761 - 22811708
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgag 65  Q
    ||||||| |||||| || |||||||||||||||| |||||||||||||||||||    
T  22811761 acagatcgcaacatcctaacttgcactcagttctggaagtgctcgcgaggcgag 22811708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 24503402 - 24503450
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  24503402 aagtgctcgggaggcgagagtatctactcgccatggcgagtacaagcca 24503450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 23071769 - 23071733
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  23071769 gctcgcgaggcgagagcctctgctcgccatggcgagt 23071733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 32451736 - 32451685
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  32451736 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 32451685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 22134020 - 22133986
Alignment:
Q  54 tcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||| |||||||||||||||||||    
T  22134020 tcgcgaggcgagagcctctgctcgccatggcgagt 22133986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 37806 - 37765
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  37806 cactcaaaagcatctaaggttccactcaaaagtcaaaaatac 37765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 19928192 - 19928155
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  19928192 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 19928155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 22460880 - 22460843
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22460880 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 22460843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 23187491 - 23187528
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  23187491 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 23187528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 23286288 - 23286329
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  23286288 cagacactcaaaagcatctaaggttcaactcaaaagtcaaaa 23286329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 26125619 - 26125656
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26125619 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26125656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 28291981 - 28291940
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  28291981 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 28291940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 41667365 - 41667402
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  41667365 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 41667402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 37924 - 37888
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  37924 gctcgcgaggcgagagcctctgctcgccgtggcgagt 37888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 27753892 - 27753940
Alignment:
Q  56 gcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    ||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  27753892 gcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 27753940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 31756231 - 31756267
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  31756231 gctcgcgaggcgagagcctctactcgccatggcgagt 31756267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 94)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 17137918 - 17137682
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17137918 agcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 17137819  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    ||||||||||| ||| ||| ||||||||||||||| |||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||    
T  17137818 ctaaagttgttctaagctaaaccaggttcaatctcattctaagtcatcatctaatctttaataaacatctttaggcactcaaaagcatctaaggttcaac 17137719  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  17137718 tcaaaagtcaaaaatacagaattcaacatgctctctg 17137682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 10508922 - 10508701
Alignment:
Q  21 aacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaa 120  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||    
T  10508922 aacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaccagccagattcccaactaatgttgttataa 10508823  T
Q  121 actataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaat 220  Q
      || | ||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||||    
T  10508822 gttaaatcaggttcaatctcattctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaat 10508723  T
Q  221 acagatttctacatgctctctg 242  Q
    ||||| ||||||||||||||||    
T  10508722 acagaattctacatgctctctg 10508701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 9703552 - 9703767
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||| |    
T  9703552 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaa 9703651  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    |||||||||||||| |||||||||||||||||||||||||||  || ||  || |||||||| ||||||||||||| ||||||||||||||||||||||     
T  9703652 ccaggttcaatctcattctaagttatcatttaatctttaataaccacctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacagaa 9703751  T
Q  227 ttctacatgctctctg 242  Q
    ||||||||||||||||    
T  9703752 ttctacatgctctctg 9703767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 11880522 - 11880753
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||| ||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  11880522 cacatatcgcaacatcctcacttgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaat 11880621  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  11880622 gttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 11880721  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||| ||||||||||||||||    
T  11880722 agtcaaaagtacagaattctacatgctctctg 11880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 12321592 - 12321361
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| | ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12321592 cacagatcgctacattctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaa 12321493  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| | ||||||||||||| ||||| |||||||| ||||||||||||  |||||  || |||||||| || |||||||||| |||||||    
T  12321492 gttgttctaagctaaatcaggttcaatctcattctaggttatcatctaatctttaataaacatctttaggcactcaaaaacgtctaaggttcaactcaaa 12321393  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| ||||||||||||    
T  12321392 agtcaaaaatacagaattcgacatgctctctg 12321361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 12187296 - 12187514
Alignment:
Q  24 attctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaact 123  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||    
T  12187296 attctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagct 12187395  T
Q  124 ataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    | | ||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| ||||    
T  12187396 aaatcaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaactaca 12187495  T
Q  224 gatttctacatgctctctg 242  Q
    || ||| ||||| ||||||    
T  12187496 gaattcaacatgttctctg 12187514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 24054738 - 24054950
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| |||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  24054738 cacagatcgcaatattctcactttcactcagttctggaagtgctcgcaagacgagagcatctgctcgccatggcgagtacaagccagattcccaacaaaa 24054837  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||   || || ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||    
T  24054838 gttgttctaggttaaactaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaa 24054937  T
Q  211 agtcaaaaataca 223  Q
    |||||||| ||||    
T  24054938 agtcaaaactaca 24054950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 14430149 - 14430379
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||    
T  14430149 acagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaattccaacttaag 14430248  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| ||||||||||||||| |||||| | ||||| ||||||||||||  |||||| || ||||||||  |||||||||||  ||||||||    
T  14430249 ttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctttaataaacatctcaaggcactcaaaagcatctaaggtttaactcaaaa 14430348  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  14430349 gtcaaaattacagaattcaacatgctctctg 14430379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 27 - 218
Target Start/End: Complemental strand, 18154670 - 18154479
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||| ||   || |    
T  18154670 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaa 18154571  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||| |||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||    
T  18154570 ccaagttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 18154479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 19649334 - 19649127
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || ||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||     
T  19649334 cacagatcgcaatatcctcacttacactcggttctggaagtgctcgcgagacgagagcatctgctcgccatggcgagtacaagccagattcccaacaaag 19649235  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||   || ||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||| |||||||| ||||||||||||| |||||||    
T  19649234 gttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatatttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaa 19649135  T
Q  211 agtcaaaa 218  Q
    ||||||||    
T  19649134 agtcaaaa 19649127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 2760403 - 2760628
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||| | | ||||||  |||||||    
T  2760403 tcacaacaatctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgacgagtacaagccatatttccaactccagttgtt 2760502  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
      || ||| |||||||||||||||||||||| | ||||| ||||||||| ||  |||||  || ||||||||  |||||||||||| |||||||||||||    
T  2760503 cgaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaa 2760602  T
Q  217 aaatacagatttctacatgctctctg 242  Q
    || |||  | ||| ||||||||||||    
T  2760603 aattacgaaattcaacatgctctctg 2760628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 72 - 241
Target Start/End: Original strand, 15211759 - 15211928
Alignment:
Q  72 tgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgc 171  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | | | ||| ||||||||||||||| |||||||||||||||||||| || |||  |    
T  15211759 tgctcgccatggcgagtacaagctagaatcccaactaaagttaatctgagctaaaccaggttcaatctcattctaagttatcatttaatcatttataaac 15211858  T
Q  172 atctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 241  Q
    ||||  || ||||||||  |||||||||||| ||||||||||||| | |||||| ||| |||||||||||    
T  15211859 atctttaggcactcaaaagcatctaaggttcaactcaaaagtcaagagtacagaattcaacatgctctct 15211928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 48593285 - 48593109
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||          ||||||    
T  48593285 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggtcgtt----------ccaggt 48593196  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    ||||||| ||||||| | ||  | ||||||||| || ||| ||  ||  ||||||||||||| ||||||| ||||||||||||||||    
T  48593195 tcaatcttgttctaaatcattctctaatctttagtaggcacctaaaggtactcaaagacatccaaggttcaactcaaaagtcaaaaa 48593109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 11312925 - 11313124
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  11312925 tgcactcagttctggaagtgctcccgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 11313014  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    |||||||  ||| || | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  11313015 tcaatctttttcaaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 11313114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 16438862 - 16438779
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 117  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16438862 gcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttt 16438779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 6801490 - 6801572
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  6801490 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgtt 6801572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 15580968 - 15581168
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| |||||||         ||||||    
T  15580968 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttt---------ccaggt 15581058  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| |||||||   ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||||||||  |||| ||| ||    
T  15581059 tcaatcttgttctaaaacatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 15581158  T
Q  233 atgctctctg 242  Q
    ||||||||||    
T  15581159 atgctctctg 15581168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 11987489 - 11987572
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  11987489 tgcactcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt 11987572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 13635298 - 13635215
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  13635298 tgcactcagttctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtacaagccagattcccaactaaggttgtt 13635215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 18886 - 18804
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  18886 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 18804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 13149433 - 13149607
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 134  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||||    
T  13149433 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttc 13149522  T
Q  135 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    ||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  13149523 aatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 13149607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 15728603 - 15728684
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  15728603 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 15728684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 242
Target Start/End: Original strand, 26292673 - 26292871
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    ||||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||          |||||||    
T  26292673 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggtt 26292762  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 233  Q
    ||||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| |||    
T  26292763 caatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgaca 26292862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 12318404 - 12318487
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  12318404 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatagcgagtacaagccagattcccaactaaggttgtt 12318487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 14217192 - 14217274
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  14217192 gcactcagttctggaagtgctcgcgaggtgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 14217274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 15605101 - 15604902
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| || ||||||| ||||||          ||||||    
T  15605101 tgcactcagttctagaagtggtcacgaggcaagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgtt----------ccaggt 15605012  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | |||| |||| ||  || ||  ||  |||||||  |||||||||||| |||||||||||||||   |||| ||| ||    
T  15605011 tcaatcttgttctaaatcatcctctaatatttagtaaacacctaaaggtactcaaaagcatctaaggttcaactcaaaagtcaaaagctcagaattcgac 15604912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 18557249 - 18557323
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 108  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18557249 gcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacta 18557323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 9593622 - 9593698
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  9593622 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaactaa 9593698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 9644585 - 9644661
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  9644585 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaactaa 9644661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 13462039 - 13462114
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  13462039 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggtgagtacaagccagaattccaactaa 13462114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 16724459 - 16724377
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||    
T  16724459 gcactcagttctgaaagtgctcgcgaggcgagagcatcagctcgccatggcgagttcaagccagaattccaactaaggttgtt 16724377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 17701473 - 17701391
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||    
T  17701473 gcactcagttctgaaagtgctcgcgaggcgagagcatcagctcgccatggcgagttcaagccagaattccaactaaggttgtt 17701391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 20569420 - 20569342
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  ||||||| ||||||    
T  20569420 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagattttcaactaaggttgtt 20569342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 8917704 - 8917779
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||||| |||||||||||||||||| || |||||    
T  8917704 gcactcagttctggaagtgctcgcgaggcaagagcatcagctcgccattgcgagtacaagccagaattcctactaa 8917779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 9446003 - 9445904
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||| |||   ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||| | |||||||| ||||||    
T  9446003 tcacaacattatcaaaagcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactttccagatttccaactaaggttgtt 9445904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 12718948 - 12719009
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12718948 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 12719009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 12723859 - 12723920
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12723859 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 12723920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 16907027 - 16906966
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16907027 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 16906966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 18279683 - 18279744
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18279683 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 18279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 18283646 - 18283707
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18283646 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 18283707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 16275772 - 16275851
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||||   |||||||||| ||||||    
T  16275772 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcaagtacaagccaacttcccaactaaggttgtt 16275851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 11262619 - 11262688
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  11262619 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 11262688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 11548082 - 11548013
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  11548082 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 11548013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 11554678 - 11554609
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  11554678 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 11554609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 12692786 - 12692855
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  12692786 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 12692855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 12715144 - 12715205
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  12715144 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaagcca 12715205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 14953488 - 14953557
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  14953488 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 14953557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 16114521 - 16114582
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  16114521 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagcca 16114582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 16117674 - 16117735
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  16117674 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagcca 16117735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 35151896 - 35151945
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35151896 gaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagcca 35151945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 14959455 - 14959523
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  14959455 aagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 14959523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 241
Target Start/End: Original strand, 16583550 - 16583709
Alignment:
Q  72 tgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgc 171  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||          ||||||||||||| ||||||| | ||  | ||||||||| ||  |    
T  16583550 tgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttcaatcttgttctaaatcattctctaatctttagtagac 16583639  T
Q  172 atctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 241  Q
    | ||  ||  |||||||| |||||||||||| ||||||||||||||||  || | ||| |||||||||||    
T  16583640 acctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcataattcgacatgctctct 16583709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 25039025 - 25038956
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||   |||||||||| ||||||    
T  25039025 gaagtgctcgcgaggcgagagtatctactcaccatggcgagtacaagccaacttcccaactaatgttgtt 25038956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 42205394 - 42205466
Alignment:
Q  36 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 108  Q
    |||||||||| ||||||  ||||||||||||||| ||||||||||||||| ||||  |||||||| |||||||    
T  42205394 actcagttctggaagtgtccgcgaggcgagagcaactgctcgccatggcgcgtacttgccagaattccaacta 42205466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 3272173 - 3272288
Alignment:
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    ||||||||||||| ||||||| | ||| | ||||||||| ||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||  |     
T  3272173 ccaggttcaatcttgttctaaatcatcctctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaa 3272272  T
Q  227 ttctacatgctctctg 242  Q
    ||| ||||||||||||    
T  3272273 ttcaacatgctctctg 3272288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 13635159 - 13635099
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  13635159 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 13635099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 15143843 - 15143795
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatc 101  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||    
T  15143843 ctcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatc 15143795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 18302489 - 18302529
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  18302489 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 18302529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 11995737 - 11995696
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  11995737 cactcaaaaacatctaaggttcaactcaaaagtcaaaaatac 11995696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 34201221 - 34201266
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||    
T  34201221 cagacactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 34201266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 17701335 - 17701275
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||  ||||||||||||    
T  17701335 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaatttgacatgctctctg 17701275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 28505107 - 28505071
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  28505107 gctcgcgaggcgagagcctctgctcgccatggcgagt 28505071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 44116820 - 44116872
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  44116820 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 44116872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 2832114 - 2832075
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  2832114 agtgctcgcgaggcgagagcctctgctcgccatggtgagt 2832075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 39267455 - 39267416
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  39267455 agtgctcccgaggcgagagcctctgctcgccatggcgagt 39267416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 40443703 - 40443754
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  40443703 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 40443754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 26212427 - 26212469
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||    
T  26212427 cactcaaaggcatctaaggttcaactcaaaagtcaaaattaca 26212469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 28504980 - 28504938
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||    
T  28504980 cactcaaaaacatctaaggttcaactcaaaagtcaaaattaca 28504938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 11080 - 11043
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  11080 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 11043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 18748 - 18711
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18748 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 2831985 - 2831948
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  2831985 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 2831948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 6801628 - 6801665
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  6801628 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 6801665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 9593761 - 9593798
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  9593761 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 9593798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 9644724 - 9644761
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  9644724 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 9644761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 9751229 - 9751192
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  9751229 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 9751192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 11987628 - 11987665
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  11987628 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 11987665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 11995837 - 11995800
Alignment:
Q  51 tgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  11995837 tgctcgcgaggcgagagcctctgcttgccatggcgagt 11995800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 15728740 - 15728777
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15728740 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15728777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 16275907 - 16275944
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16275907 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16275944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 16724321 - 16724284
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16724321 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16724284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 27847523 - 27847482
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  27847523 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 27847482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 35152021 - 35152058
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  35152021 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 35152058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 38227795 - 38227844
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcc 102  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||    
T  38227795 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcc 38227844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 39722544 - 39722581
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatc 71  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  39722544 gcactcaattctggaagtgctcgcgaggcgagagcatc 39722581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 40443819 - 40443860
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  40443819 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 40443860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 68060 - 68096
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  68060 gctcgcgaggcgagagcctctactcgccatggcgagt 68096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 810940 - 810900
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| ||| |||||||||||||||    
T  810940 aagtactcgcgaggcgagagcctctactcgccatggcgagt 810900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 3272095 - 3272143
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgag 65  Q
    ||||||||||||||   |||||||||||| |||||||||| ||||||||    
T  3272095 tcacaacattctcaaaagcactcagttctggaagtgctcgtgaggcgag 3272143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 4318365 - 4318317
Alignment:
Q  42 ttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 90  Q
    |||| |||||||||||||||||||||   || |||||||||||||||||    
T  4318365 ttctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtac 4318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 9389380 - 9389332
Alignment:
Q  175 tccagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    |||||||||||||| ||||| ||||||| ||| ||||||||||| ||||    
T  9389380 tccagacactcaaaaacatccaaggttcaacttaaaagtcaaaagtaca 9389332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 9389502 - 9389466
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  9389502 gctcgcgaggcgagagcctctactcgccatggcgagt 9389466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 9751356 - 9751320
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  9751356 gctcgcgaggcgagagcctctgctcaccatggcgagt 9751320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 12318543 - 12318603
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||  ||||||| |||| ||||||||||||||||  |||| ||| ||||||||||||    
T  12318543 actcaaaagcatctaatgttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 12318603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 34201098 - 34201134
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  34201098 gctcgcgaggcaagagcctctgctcgccatggcgagt 34201134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 18511 - 18275
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18511 agcaacacagaacacgacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 18412  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    ||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||| |||||||||||| ||    
T  18411 ctaaagttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaggcatctaaggttcaac 18312  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||| |||| ||| ||||||||||||    
T  18311 tcaaaagtaaaaaatgcagaattcgacatgctctctg 18275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 15670 - 15901
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  15670 cacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaat 15769  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  || ||  || |||||||| ||||||||||||| |||||||    
T  15770 gttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaccacctttaggcactcaaaaacatctaaggttcaactcaaa 15869  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||||||||||||||||    
T  15870 agtcaaaaatacagaattctacatgctctctg 15901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 6e-83; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 23201638 - 23201869
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||     
T  23201638 cacagatcgcaatatcctcacttgcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccagattcccaactaat 23201737  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| || |||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||    
T  23201738 gttgttataagctaaaccaggttcaatctcattataagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaa 23201837  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||| ||||||||||||||||    
T  23201838 agtcaaaagtacagaattctacatgctctctg 23201869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 22032580 - 22032816
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22032580 agcaacacatatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaatcccaa 22032679  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    ||||| ||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||    
T  22032680 ctaaaattgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaac 22032779  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||||||||| ||| || || ||||||    
T  22032780 tcaaaagtcaaaaatacagaattcaacgtgttctctg 22032816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 23501195 - 23500964
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||     
T  23501195 cacagatcgcaacattctcactttcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatggcgagtacaagcaagattcccaactaat 23501096  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||| |||||| ||||||||||| ||||||| |||||| ||| |||||||| ||||||||||||| |||||||    
T  23501095 gttgttctaagctaaaccaggttcaatctcggtctaagctatcatttaatatttaataagcatcttcaggcactcaaaaacatctaaggttcaactcaaa 23500996  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||| |  |||||||| ||||||||||||||||    
T  23500995 agttaggaatacagaattctacatgctctctg 23500964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 18769859 - 18769623
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| |||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||    
T  18769859 agcaacacagatcactacattctcacttgcgctcagttctggaagtgctcgcgacgcgagagcatctgctcgccacggcgagtacaagccagaatcctaa 18769760  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    ||||| ||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||    
T  18769759 ctaaaattgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaac 18769660  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    | |||||||||||||||||| ||| ||||| ||||||    
T  18769659 ttaaaagtcaaaaatacagaattcaacatgttctctg 18769623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 14079417 - 14079648
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||     
T  14079417 cacagatcgcaacatcctcacttgcactcagttctagaagtgctcgcgaggcgagagcatttgctcgccatggcgagtactagccagattcccaactaat 14079516  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| |||||   ||| |  || |||||||| ||||||||||||  |||||||    
T  14079517 gttgttctaagctaaaccaggttcaatctcattctaagttatcattaaatcattaattaacatatttaggcactcaaaaacatctaaggttgaactcaaa 14079616  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||||||||||||||||    
T  14079617 agtcaaaaatacagaattctacatgctctctg 14079648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 37724189 - 37724403
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||| |||  || |    
T  37724189 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaccagccagattcccaacaaatgttgttctaagttaaa 37724288  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| ||||||||||||||| ||||||     
T  37724289 ccaggttcaatctcattctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacagaa 37724388  T
Q  227 ttctacatgctctct 241  Q
    |  ||||||||||||    
T  37724389 tcttacatgctctct 37724403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 21366515 - 21366286
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  21366515 acagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaag 21366416  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| | |||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  21366415 ttgttctaagctaaatcaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaa 21366316  T
Q  212 gtcaaaaatacagatttctacatgctctct 241  Q
    ||||||| |||||| ||| |||||||||||    
T  21366315 gtcaaaattacagaattcaacatgctctct 21366286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 23512376 - 23512604
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| || || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||    
T  23512376 cacagatcgcaacatcctaacatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattttcaactaaa 23512475  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  23512476 gttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 23512575  T
Q  211 agtcaaaaatacagatttctacatgctct 239  Q
    |||| |||||||||| ||| |||||||||    
T  23512576 agtcgaaaatacagaattcaacatgctct 23512604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 20805816 - 20806047
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| || | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||    
T  20805816 cacagatcgcaacatcctaatttgcattcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactcaa 20805915  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  ||| |||||||| |||||||    
T  20805916 gttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatataaggttcaactcaaa 20806015  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||| ||| ||||||||||||    
T  20806016 agtcaaaattacagaattcaacatgctctctg 20806047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 48 - 242
Target Start/End: Original strand, 21887130 - 21887324
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| | |||||||| |||| ||||||    
T  21887130 aagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaagcaggttcattctcattctaa 21887229  T
Q  148 gttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||||||||||  |||||  || |||||||| ||||||||||||| ||||||||||||||| |||||| ||| ||||||||||||    
T  21887230 gttatcatttaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaagtacagaattcaacatgctctctg 21887324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 23572351 - 23572504
Alignment:
Q  14 agatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagtt 113  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23572351 agatcacaacattctcacttgcactcagttctggaagtgcgcgcgaggcgagagcatctgctcgccatggggagtacaagccagaatcccaactaaagtt 23572450  T
Q  114 gttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaat 167  Q
    ||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  23572451 gttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaat 23572504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 30 - 218
Target Start/End: Original strand, 26704354 - 26704542
Alignment:
Q  30 acttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 129  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |  |||||| ||   || ||||    
T  26704354 acttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaacca 26704453  T
Q  130 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| | ||||| ||||| |||||||||||||||    
T  26704454 ggttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaaaaatatctagggttcaactcaaaagtcaaaa 26704542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 30 - 218
Target Start/End: Original strand, 26974087 - 26974275
Alignment:
Q  30 acttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 129  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |  |||||| ||   || ||||    
T  26974087 acttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaacca 26974186  T
Q  130 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| | ||||| ||||| |||||||||||||||    
T  26974187 ggttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaaaaatatctagggttcaactcaaaagtcaaaa 26974275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 38 - 241
Target Start/End: Original strand, 31342399 - 31342602
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 137  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||  |||||   |||||||| |||||| ||| |||  |||||||||||    
T  31342399 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagttcagcccagatctccaactaaggttgttctaagctaagccaggttcaat 31342498  T
Q  138 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgct 237  Q
    ||| ||||| ||||||||||||||||  |||  |||||  || ||||||||  |||||||||||| |||||||||||||||| ||||| ||  |||||||    
T  31342499 ctcattctaggttatcatttaatcttctataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaacacagaatttgacatgct 31342598  T
Q  238 ctct 241  Q
    ||||    
T  31342599 ctct 31342602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 17410724 - 17410923
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  17410724 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 17410813  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||||| ||||||||| ||  || ||  ||  |||| ||| | |||||||||| ||||||||||||||||  |||| ||| ||    
T  17410814 tcaatcttgttctaaatcatcatctaatctttagtagacacctaaaggtactccaaggcgtctaaggttcaactcaaaagtcaaaaactcagaattcgac 17410913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 20910629 - 20910454
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  20910629 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 20910540  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  ||||||||||||||||||||| |||||||||||||||    
T  20910539 tcaatcttgttctaattcatcctctaatctttagtagacacctaaaggtactcaaagacatctaaggttcaactcaaaagtcaaaa 20910454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 23535418 - 23535242
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||          ||||||    
T  23535418 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagattcccaactaaggttgtt----------ccaggt 23535329  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    ||||||||||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  23535328 tcaatctcgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 23535242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 24532876 - 24532701
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          |||||||    
T  24532876 gcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt----------ccaggtt 24532787  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||   ||||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  24532786 caatctcgttctaaatcattccttaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 24532701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 21340595 - 21340513
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21340595 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 21340513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 26665959 - 26665877
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26665959 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 26665877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 26937556 - 26937474
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26937556 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 26937474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 242
Target Start/End: Complemental strand, 17918979 - 17918781
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||          |||| ||    
T  17918979 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactaaggttgtt----------ccagttt 17918890  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 233  Q
    |||||| ||||||| | ||| | ||||||||||||  || ||  || ||||||||  |||||||||||| ||||||||||||||| |||| | ||| |||    
T  17918889 caatcttgttctaaatcatcctctaatctttaatacacaactaaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaattcgaca 17918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 18356604 - 18356687
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  18356604 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 18356687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 16674430 - 16674605
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||          |||||||    
T  16674430 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaactaaggttgtt----------ccaggtt 16674519  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  16674520 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 16674605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 20232828 - 20232910
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  20232828 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcctaactaaggttgtt 20232910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 12028393 - 12028215
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  12028393 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 12028304  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||| ||||||| | ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  12028303 caatcttgttctaaatcatcctctaatctttaatagacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 12028215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 18774482 - 18774565
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 117  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  18774482 gcacccagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaactaaggttgttt 18774565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 42805698 - 42805781
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 117  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  42805698 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagccagaattccaactaaggttgttt 42805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 17718263 - 17718185
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  17718263 tcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaactaaggttgtt 17718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 23451621 - 23451707
Alignment:
Q  20 caacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 106  Q
    |||||||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23451621 caacattctcaaatgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac 23451707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 23458865 - 23458951
Alignment:
Q  20 caacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 106  Q
    |||||||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23458865 caacattctcaaatgcactcagttcttgaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac 23458951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 23463126 - 23463212
Alignment:
Q  20 caacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 106  Q
    |||||||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23463126 caacattctcaaatgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac 23463212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 25229233 - 25229151
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 117  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  25229233 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttt 25229151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 25293389 - 25293307
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 117  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  25293389 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttt 25293307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 1858821 - 1858732
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 106  Q
    |||| |||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  1858821 tcacgacattctcaaatgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaatccagaattccaac 1858732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 21885016 - 21884935
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  21885016 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 21884935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 222
Target Start/End: Original strand, 24222170 - 24222344
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 137  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||          |||||||||||    
T  24222170 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt----------ccaggttcaat 24222259  T
Q  138 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    || ||||||| | ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  24222260 cttgttctaaatcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 24222344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 242
Target Start/End: Complemental strand, 26742574 - 26742376
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    ||||||||||||  || || |||||||||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||          ||||| |    
T  26742574 gcactcagttctgaaaatggtcgcgaggcgagagcatcagctcgccatggcgagtacaagccagatttccaactaaggttgtt----------ccaggct 26742485  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 233  Q
    |||||||||||||| | || || |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| || ||||    
T  26742484 caatctcgttctaaatcattatctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattttaca 26742385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 18784341 - 18784408
Alignment:
Q  50 gtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 117  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  18784341 gtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaactaaggttgttt 18784408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 4036499 - 4036580
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||||||| |||||||| ||||||    
T  4036499 cactcagttctggaagtgctcgcgaggcgaaagcatcaactcgccatggcgagtacaagccagaattccaactaaggttgtt 4036580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 26172743 - 26172824
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||    
T  26172743 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttccctactaaggttgtt 26172824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 221
Target Start/End: Original strand, 26680868 - 26681045
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  26680868 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 26680957  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 221  Q
    || ||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| ||||||    
T  26680958 cattcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaata 26681045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 221
Target Start/End: Original strand, 26952475 - 26952652
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  26952475 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 26952564  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 221  Q
    || ||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| ||||||    
T  26952565 cattcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaata 26952652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 19472546 - 19472465
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  | |||||||| ||||||    
T  19472546 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccagctttccaactaaggttgtt 19472465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 21873518 - 21873595
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||| ||| || || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  21873518 cacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagt 21873595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 123133 - 123070
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccag 97  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  123133 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccag 123070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 20296127 - 20296188
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20296127 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 20296188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 21295078 - 21295009
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  21295078 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 21295009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 25535279 - 25535348
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  25535279 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 25535348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 22757414 - 22757458
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgc 78  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  22757414 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 22757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 15441769 - 15441720
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  15441769 gaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagcca 15441720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 23572510 - 23572559
Alignment:
Q  193 tctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  23572510 tctaaggttcaactcaaaagtcaaaaatacagaattcgacatgctctctg 23572559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 22120002 - 22119963
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  22120002 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 22119963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 22760026 - 22760141
Alignment:
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    ||||||||||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| ||||||| ||     
T  22760026 ccaggttcaatcttgttctaaatcatcctctaatctttagtacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatacggaa 22760125  T
Q  227 ttctacatgctctctg 242  Q
     || ||||||||||||    
T  22760126 atcaacatgctctctg 22760141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 23337103 - 23337060
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 90  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  23337103 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtac 23337060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 19660644 - 19660608
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19660644 gctcgcgaggcgagagcctctgctcgccatggcgagt 19660608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 11581051 - 11581016
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||| |||||||||||||||||||    
T  11581051 ctcgcgaggcgagagcctctgctcgccatggcgagt 11581016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 22107180 - 22107129
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||||||| |||| || | ||||||||||    
T  22107180 ctcgcgaggcgagagcctctgctcgccatggtgagttcaggtcagaatccca 22107129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 24767146 - 24767107
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  24767146 agtgctcgcgaggcgagagcctctgctcgccatgacgagt 24767107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 19660516 - 19660474
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    ||||||||  |||||||||||| ||||||||||||||||||||    
T  19660516 cactcaaaagcatctaaggttcaactcaaaagtcaaaaataca 19660474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 4036636 - 4036673
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  4036636 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 4036673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 17718129 - 17718092
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  17718129 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 17718092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 18356743 - 18356780
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18356743 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18356780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 18784463 - 18784500
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18784463 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18784500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 19669338 - 19669379
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||| |||||||||| || |||||||||||||||    
T  19669338 cagacactcaaaaacatctaaggatcaactcaaaagtcaaaa 19669379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 21292660 - 21292619
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  21292660 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 21292619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 21340457 - 21340420
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21340457 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21340420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 21482894 - 21482931
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21482894 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21482931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 21884879 - 21884842
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21884879 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21884842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 22119872 - 22119811
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||| |||||||||||| |||||||||||||||  ||| | || | |||||||||||    
T  22119872 cactcaaaggcatctaaggttcaactcaaaagtcaaaatcacaaaattttgcatgctctctg 22119811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 25229096 - 25229059
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  25229096 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 25229059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 25293252 - 25293215
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  25293252 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 25293215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 26172880 - 26172917
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26172880 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26172917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 26665821 - 26665784
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26665821 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26665784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 26937418 - 26937381
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26937418 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26937381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 33409622 - 33409659
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  33409622 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 33409659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 42805836 - 42805873
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  42805836 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 42805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 5888982 - 5888946
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  5888982 gctcgcgaggcgagagcctctactcgccatggcgagt 5888946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 21565858 - 21565894
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||| |||||||||||||||||||    
T  21565858 gctcacgaggcgagagcctctgctcgccatggcgagt 21565894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 22959340 - 22959304
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  22959340 gctcgcgaggcgagagcctctactcgccatggcgagt 22959304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 25744035 - 25744071
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  25744035 gctcgcgaggcgagagcctctactcgccatggcgagt 25744071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 27093 - 27322
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| ||| || ||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  27093 acagatcgcaatatcctcacttgcactcagttctggaaatgcttgcgaggcaagagcatctgctcgccatggcgaatacaagccagaattccaactaaag 27192  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||| ||||||||    
T  27193 ttgttctaagctataccaggttaaatctcgttctaagttatcatttaatctttaatatgcatcttcaggcactcaaaaacatctaaggttcaactcaaaa 27292  T
Q  212 gtcaaaaatacagatttctacatgctctct 241  Q
    || ||||||||||| ||| |||||||||||    
T  27293 gtaaaaaatacagaattcaacatgctctct 27322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 19899364 - 19899592
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||     
T  19899364 cacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactagccagattcccaactaat 19899463  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  19899464 gttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 19899563  T
Q  211 agtcaaaaatacagatttctacatgctct 239  Q
    ||||||||||||||| |||||||||||||    
T  19899564 agtcaaaaatacagaattctacatgctct 19899592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 20465894 - 20465658
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20465894 agcaacacagaacacgacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaa 20465795  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    |||||| |||| ||| ||| |||||||||||||||||||||||| ||||| |||||||||||   |||||  || ||||||||  |||||||||||| ||    
T  20465794 ctaaagctgttctaagctaaaccaggttcaatctcgttctaagtcatcatctaatctttaattaacatcttaaggcactcaaaagcatctaaggttcaac 20465695  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  20465694 tcaaaagtcaaaaatacagaattcaacatgctctctg 20465658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 377542 - 377778
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| |||||||||| ||||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  377542 agcaacacagatcacgacattctcattagcactcagttctggaagtgctcgcgagacgagagcatctgctcgccatggcgagtacaagccagaattccaa 377641  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    |||||||| || ||| ||| ||||||||||||||| ||||||||||| ||||||||||||| |  |||||  || ||||||||  |||||||||||| ||    
T  377642 ctaaagttattctaagctaaaccaggttcaatctcattctaagttataatttaatctttaacaaacatcttaaggcactcaaaagcatctaaggttcaac 377741  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  377742 tcaaaagtcaaaaatacagaattcgacatgctctctg 377778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 16184997 - 16185228
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    ||||| || |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  16184997 cacaggtcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattctcaactaaa 16185096  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| | | ||||||||||||||| |||||||||||||||||||||||||||  |||||  || |||||||| ||||||| ||||| |||||||    
T  16185097 gttgttctaagccaaaccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaaacatctatggttcaactcaaa 16185196  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| ||||||||||||    
T  16185197 agtcaaaaatacagaattcaacatgctctctg 16185228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 17353771 - 17353556
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||   || |    
T  17353771 ctcacttgcactcagttctgcaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaaagctgttctaggttaaa 17353672  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    | |||||||||||||||| ||||||||||||||||||||||| |||||| |||  ||||||| ||||||||||||| ||||||||||||||||||||||     
T  17353671 ctaggttcaatctcgttcaaagttatcatttaatctttaataggcatcttcagggactcaaaaacatctaaggttcaactcaaaagtcaaaaatacagaa 17353572  T
Q  227 ttctacatgctctctg 242  Q
    ||||||||||||||||    
T  17353571 ttctacatgctctctg 17353556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 21168571 - 21168340
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| ||||||||||||||| ||  |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21168571 cacagatcgcaacatcctcacttgcactcagatcaggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaa 21168472  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    ||||||  || ||| ||||||||||||||| |||||||||||||| ||||||||||||  |||||  || |||||||| || |||||||||| |||||||    
T  21168471 gttgttcaaagctaaaccaggttcaatctcattctaagttatcatctaatctttaataaacatctttaggcactcaaaaacttctaaggttcaactcaaa 21168372  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| || |||||||||    
T  21168371 agtcaaaaatacagaattcaacctgctctctg 21168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 22010523 - 22010298
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  22010523 tcacaacattctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactcaagttgtt 22010424  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
     ||| ||| |||||||||||||||||||||| | ||||| ||||||||| ||  |||||  || ||||||||  |||||||||||| ||| |||||||||    
T  22010423 ctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactaaaaagtcaa 22010324  T
Q  217 aaatacagatttctacatgctctctg 242  Q
    ||||||||| ||| ||||||||||||    
T  22010323 aaatacagaattcaacatgctctctg 22010298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 31 - 242
Target Start/End: Complemental strand, 23776664 - 23776452
Alignment:
Q  31 cttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccag 130  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| ||| ||| |||||    
T  23776664 cttgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgcgatagcgagtacaagccagattcccaactaaagttgttctaagctaaaccag 23776565  T
Q  131 gttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatct-aaggttctactcaaaagtcaaaaatacagatttc 229  Q
    |||||||||| |||||||||||||||||||||||||||  |||||  || |||||||| |||||| ||||||| |||||||||||||||||||||| |||    
T  23776564 gttcaatctcattctaagttatcatttaatctttaataatcatctttaggcactcaaaaacatctaaaggttcaactcaaaagtcaaaaatacagaattc 23776465  T
Q  230 tacatgctctctg 242  Q
     ||||||||||||    
T  23776464 aacatgctctctg 23776452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 30643140 - 30642910
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||||||    
T  30643140 acagatcgcaacatcctaacttgcattcaattctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattttcaactaaag 30643041  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| ||||||||    
T  30643040 ttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaa 30642941  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||| ||| ||||||||||||    
T  30642940 gtcaaaaatacagaattcgacatgctctctg 30642910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 24756004 - 24756221
Alignment:
Q  25 ttctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 124  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||    
T  24756004 ttctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagcta 24756103  T
Q  125 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 224  Q
     |||||||||||||||  ||||||| ||||| ||||||||| |    ||||  || |||||||| ||||||||||||| |||||||||| ||||||||||    
T  24756104 aaccaggttcaatctcactctaagtcatcatctaatctttatttaatatctttaggcactcaaaaacatctaaggttcaactcaaaagtaaaaaatacag 24756203  T
Q  225 atttctacatgctctctg 242  Q
    | | ||||||||||||||    
T  24756204 aatcctacatgctctctg 24756221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 15602866 - 15602636
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  15602866 acagatcgcaacatactaacttgcattaagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaag 15602767  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||| ||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  15602766 ttgttctaagctaaaccaggttcaatcttgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaa 15602667  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  15602666 gtcaaaattacagaattcaacatgctctctg 15602636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 15611318 - 15611088
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  15611318 acagatcgcaacatactaacttgcattaagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaag 15611219  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||| ||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  15611218 ttgttctaagctaaaccaggttcaatcttgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaa 15611119  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  15611118 gtcaaaattacagaattcaacatgctctctg 15611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 19259446 - 19259221
Alignment:
Q  16 atcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgt 115  Q
    ||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  19259446 atcacgacattctaacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgaatacaagccagaattccaactaaggttgt 19259347  T
Q  116 tttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtca 215  Q
    | ||| ||| |||||||| |||||| |||||||| ||||||||||||||||||  |||||  || ||||||||| |||||||||||| ||||||||||||    
T  19259346 tctaagctaaaccaggtttaatctcattctaagtcatcatttaatctttaataaacatctttaggcactcaaag-catctaaggttcaactcaaaagtca 19259248  T
Q  216 aaaatacagatttctacatgctctctg 242  Q
    ||| |  ||| ||| ||||||||||||    
T  19259247 aaattcaagaattcaacatgctctctg 19259221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 19976714 - 19976947
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||||||     
T  19976714 cacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccattgcgagtactagtcagattcccaactaat 19976813  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||| | |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  19976814 gttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 19976913  T
Q  211 agt--caaaaatacagatttctacatgctctctg 242  Q
    |||   ||||||||| | ||||||||||||||||    
T  19976914 agtaaaaaaaatacaaaattctacatgctctctg 19976947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 19983362 - 19983595
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| |||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| || |||| ||||||||||     
T  19983362 cacagatcgcaacatcctcatttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtactagtcagattcccaactaat 19983461  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||| | |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  19983462 gttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 19983561  T
Q  211 agt--caaaaatacagatttctacatgctctctg 242  Q
    |||   ||||||||||| ||||||||||||||||    
T  19983562 agtaaaaaaaatacagaattctacatgctctctg 19983595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 27 - 222
Target Start/End: Complemental strand, 21389286 - 21389091
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| || |||||||||||||||||| ||||||| |  |||||| |||  || |    
T  21389286 ctcacttgcactcagttctggaagtgctcgcgaagcgagagcatctgctcaccttggcgagtacaagccagattcccaacaatggttgttctaagttaaa 21389187  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||||||||||| |||||||||||||| ||||||||| || |||||| ||| ||||||||  |||||||||||| |||||||||||||||||||    
T  21389186 ccaggttcaatctcattctaagttatcatataatctttattaagcatcttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 21389091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 12 - 213
Target Start/End: Complemental strand, 17926556 - 17926355
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || | ||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||    
T  17926556 acagatcgcaacatactaatttgcattcagttctgggagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccataattccaacttaag 17926457  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| |||  || |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  17926456 ttgttctaagataaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaa 17926357  T
Q  212 gt 213  Q
    ||    
T  17926356 gt 17926355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 16410105 - 16409875
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| || | ||||| ||||||||  | |||||||| | |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  16410105 cacagatcgcaacatcctaatttgcattcagttctgaaggtgctcgccaagcgagagcatctgctcgccatggcgagttcaagccagaattccaactaaa 16410006  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    ||| || ||| ||| ||||||||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||    
T  16410005 gttattctaagctaaaccaggttcaatctcattctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaa 16409906  T
Q  211 agtcaaaaatacagatttctacatgctctct 241  Q
    |||||||| |||  | ||| |||||||||||    
T  16409905 agtcaaaattacgaaattcaacatgctctct 16409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 213
Target Start/End: Complemental strand, 21395816 - 21395630
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| |  |||||| |||  ||      
T  21395816 ctcacttgcactcagttctggacgtgctcgcgaggcgagagcatctgcttgccttggcgagtacaagccagattcccaacaatggttgttctaagttaac 21395717  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagt 213  Q
    |||||||||||||| |||||||||||||| ||||||||| || |||||| ||| ||||||||  |||||||||||| ||||||||||    
T  21395716 ccaggttcaatctcattctaagttatcatataatctttattaagcatcttcaggcactcaaaagcatctaaggttcaactcaaaagt 21395630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 213
Target Start/End: Complemental strand, 21790309 - 21790123
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| |  |||||| |||  ||      
T  21790309 ctcacttgcactcagttctggacgtgctcgcgaggcgagagcatctgcttgccttggcgagtacaagccagattcccaacaatggttgttctaagttaac 21790210  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagt 213  Q
    |||||||||||||| |||||||||||||| ||||||||| || |||||| ||| ||||||||  |||||||||||| ||||||||||    
T  21790209 ccaggttcaatctcattctaagttatcatataatctttattaagcatcttcaggcactcaaaagcatctaaggttcaactcaaaagt 21790123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 34 - 218
Target Start/End: Complemental strand, 20856252 - 20856068
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||| ||| ||||||||    
T  20856252 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattgcaactaaggttgttctaagctaaaccaggtt 20856153  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||| ||| ||| | ||||| |||||||||||   |||||  || ||||||||  |||||||||||| |||||||| ||||||    
T  20856152 caatcttgttttaaatcatcatctaatctttaatggacatctaaaggcactcaaaagcatctaaggttcaactcaaaattcaaaa 20856068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 16861171 - 16860956
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||||||||  ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||   ||| | ||     
T  16861171 tcacgacattctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagcaagaattcca---aaaatggt- 16861076  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
          ||| ||||||||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||    
T  16861075 ------tattccaggttcaatcttgttctaagtcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaa 16860982  T
Q  217 aaatacagatttctacatgctctctg 242  Q
    || |||  | ||| ||||||||||||    
T  16860981 aattacgaaattcaacatgctctctg 16860956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 16412064 - 16411888
Alignment:
Q  66 agcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatcttta 165  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| |||||| ||| ||| || |||||||||||  | |||  |||||||||||||||||    
T  16412064 agcatctgctcgccatggcgagttcaagccagaattccacctaaggttgttctaagctaaactaggttcaatctgatcctacattatcatttaatcttta 16411965  T
Q  166 atatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||  |||||  || |||||||| |||| |||||||| ||||||||||||||| |||| | ||| ||||||||||||    
T  16411964 atacacatcttaaggcactcaaaaacatttaaggttcaactcaaaagtcaaaattacaaaattcaacatgctctctg 16411888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 15538726 - 15538808
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15538726 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 15538808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 24434065 - 24433983
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24434065 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 24433983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 39094786 - 39094594
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||||||||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||    
T  39094786 tcacgacattctcaaaagcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt 39094687  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
    |          | |||||||||||||||||||| ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |    
T  39094686 t----------cgggttcaatctcgttctaagtcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcca 39094597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 15532166 - 15532248
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  15532166 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcggcatggcgagtacaagccagaatcccaactaaggttgtt 15532248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 16231304 - 16231105
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||          ||||||    
T  16231304 tgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagattctcaactaaggttgtt----------ccaggt 16231215  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||  | ||||||||| ||  || ||   |  ||||||||||||||||||||| | ||||||||| ||||  |||| ||| ||    
T  16231214 tcaatcttgttctaaatcattctctaatctttagtagacacctaagggtactcaaagacatctaaggttcaaatcaaaagtcgaaaactcagaattcgac 16231115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 17828411 - 17828336
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  17828411 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaataacaactaa 17828336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 22028834 - 22028917
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| ||||||    
T  22028834 tgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtactagccagattcccaactaaggttgtt 22028917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 23834450 - 23834533
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  23834450 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatcgcgagtacaagccagattctcaactaaggttgtt 23834533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 30308582 - 30308500
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||||    
T  30308582 gcactcagttctggaagtgctcgcgaggcgagagcattagctcgccatggcgagtacaagccagaattccaactaaggttgtt 30308500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 22113555 - 22113474
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  22113555 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 22113474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 22135058 - 22134977
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  22135058 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 22134977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 23846842 - 23846761
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  23846842 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacttaggttgtt 23846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 18619756 - 18619838
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||| ||||||    
T  18619756 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgacgagtacaagccagaattccaagtaaggttgtt 18619838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 21161908 - 21161838
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccat 81  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21161908 cacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccat 21161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 22166208 - 22166127
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  22166208 cactcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 22166127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 22045138 - 22045218
Alignment:
Q  36 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||    
T  22045138 actcaggtctggaagtgctcgcgaggcgagagcatctgctcgccatgacaagtacaagccagattcccaactaaggttgtt 22045218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 21161834 - 21161735
Alignment:
Q  142 ttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 241  Q
    |||||||||||||| ||||||||||||  |||||  || |||||||| || |||||||||| |||||||||||||||||||||| ||| || ||||||||    
T  21161834 ttctaagttatcatctaatctttaataaacatctttaggcactcaaaaacttctaaggttcaactcaaaagtcaaaaatacagaattcaacctgctctct 21161735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 43252092 - 43252153
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43252092 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 43252153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 17055214 - 17055155
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17055214 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgactacaagcca 17055155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 32598959 - 32599018
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32598959 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaagcca 32599018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 32605491 - 32605550
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32605491 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaagcca 32605550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 20527740 - 20527809
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  20527740 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 20527809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 25362830 - 25362770
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 241  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  25362830 cactcaaaggcatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctct 25362770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 21972411 - 21972350
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  21972411 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtacaggcca 21972350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 21976496 - 21976435
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  21976496 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtacaggcca 21976435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 19278110 - 19278050
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| ||||  |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  19278110 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggc-agtacaagcca 19278050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 21918807 - 21918756
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  21918807 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 21918756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 23252452 - 23252393
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 241  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||| |||||||||||    
T  23252452 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctct 23252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 21249695 - 21249732
Alignment:
Q  51 tgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||| |||||||||||||||||||    
T  21249695 tgctcgcgaggcgagagcctctgctcgccatggcgagt 21249732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 5866083 - 5866047
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5866083 gctcgcgaggcgagagcctctgctcgccatggcgagt 5866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 17141228 - 17141264
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  17141228 gctcgcgaggcgagagcctctgctcgccatggcgagt 17141264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 22028973 - 22029033
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||  |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  22028973 actcaaaagcatctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 22029033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 22045274 - 22045334
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||||||||| ||||||| ||||||||  |||| ||| ||||||||||||    
T  22045274 actcaaaggcatctaaggttcaactcaaaggtcaaaaactcagaattcgacatgctctctg 22045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 41598499 - 41598551
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  41598499 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 41598551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 22057773 - 22057824
Alignment:
Q  191 catctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  22057773 catctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 22057824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 25362943 - 25362896
Alignment:
Q  57 cgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||| ||||||||||||||||||| || | ||||||||||    
T  25362943 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 25362896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 5865956 - 5865915
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  5865956 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 5865915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 15532304 - 15532341
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15532304 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15532341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 15538864 - 15538901
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15538864 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15538901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 21255533 - 21255570
Alignment:
Q  51 tgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  21255533 tgctcgcgaggcgagagccgctgctcgccatggcgagt 21255570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 22113418 - 22113381
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22113418 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 22113381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 22134921 - 22134884
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22134921 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 22134884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 22166071 - 22166034
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22166071 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 22166034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 23834589 - 23834626
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  23834589 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 23834626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 24433927 - 24433890
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  24433927 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 24433890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 32599094 - 32599131
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  32599094 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 32599131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 32605626 - 32605663
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  32605626 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 32605663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 22875380 - 22875432
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||||||||||| |||||||| |||||||||| || | |||| ||||||    
T  22875380 ctcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaa 22875432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 39834146 - 39834182
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  39834146 gctcgcgaggcgagagcctctactcgccatggcgagt 39834182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 13569797 - 13570012
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||| |    
T  13569797 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaa 13569896  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    |||||||||||||| |||||||||||||||||||||||||||  || ||  || |||||||| ||||||||||||| ||||||||||||||||||||||     
T  13569897 ccaggttcaatctcattctaagttatcatttaatctttaataaccacctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacagaa 13569996  T
Q  227 ttctacatgctctctg 242  Q
    ||||||||||||||||    
T  13569997 ttctacatgctctctg 13570012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 15124988 - 15124773
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| ||| ||| |    
T  15124988 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaa 15124889  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| | ||||||||||| ||||||| ||||||| ||||||     
T  15124888 ccaggttcaatctcgttctaagttatcatttaatctttaataggcatcttcaggcactcaaaaatatctaaggttcgactcaaaggtcaaaagtacagag 15124789  T
Q  227 ttctacatgctctctg 242  Q
    || |||||||||||||    
T  15124788 ttatacatgctctctg 15124773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 15094042 - 15094273
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || || |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  15094042 cacagatcgcaatatcctaacttgcactcagttttggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaa 15094141  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||||||||||||||||||| ||| |||||||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  15094142 gttgttctaagctataccaggttcaatctcattccaagttatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 15094241  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||||||||||| ||||    
T  15094242 agtcaaaaatacagaattctacatgctttctg 15094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 44675901 - 44676132
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||     
T  44675901 cacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatggggagtactagccagattcccaactaat 44676000  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  44676001 gttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 44676100  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||| ||| ||||||||||||||||    
T  44676101 agtcaaaaatatagaattctacatgctctctg 44676132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 12570304 - 12570521
Alignment:
Q  25 ttctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 124  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||    
T  12570304 ttctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagcta 12570403  T
Q  125 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 224  Q
     |||||||||||||||  ||||||| ||||| ||||||||||||   ||||  || |||||||| ||||||||||||| ||||| |||||||||||||||    
T  12570404 aaccaggttcaatctcactctaagtcatcatctaatctttaataaatatctttaggcactcaaaaacatctaaggttcaactcacaagtcaaaaatacag 12570503  T
Q  225 atttctacatgctctctg 242  Q
    | ||||||||||||||||    
T  12570504 aattctacatgctctctg 12570521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 15121653 - 15121422
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||  |||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  15121653 cacagatcgcaaagttctcacttgcactcaattctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaaa 15121554  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  15121553 gttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 15121454  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||| | ||| ||||||||||||    
T  15121453 agtcaaaaatacataattcaacatgctctctg 15121422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 16356802 - 16356572
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||    
T  16356802 acagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccagcttaag 16356703  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  16356702 ttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaa 16356603  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||| ||| ||||||||||||    
T  16356602 gtcaaaaatacagaattcaacatgctctctg 16356572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 23843747 - 23843979
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||     
T  23843747 cacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattttcaactaat 23843846  T
Q  111 gttgttttaaactataccaggttc-aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaa 209  Q
    |||||| ||| ||| ||||||||| |||||| ||| |||||||||||||||| |||||   |||||  || |||||||| ||||||||||||| ||||||    
T  23843847 gttgttctaagctaaaccaggttcaaatctcattccaagttatcatttaatcattaatgaacatctttaggcactcaaaaacatctaaggttcaactcaa 23843946  T
Q  210 aagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||| |||||| ||||||||||||||||    
T  23843947 aagtcaaaagtacagaattctacatgctctctg 23843979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 16487927 - 16487697
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16487927 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaaag 16487828  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    | ||| ||| ||| | |||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||| ||||| |||||||||||  ||||||||    
T  16487827 tggttctaagctaaaacaggttcaatctcgttctaaatcatcatctaatctttaataaacatctttaggcacccaaaggcatctaaggtttaactcaaaa 16487728  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||| ||| ||||||||||||    
T  16487727 gtcaaaaatacagaattcgacatgctctctg 16487697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 36133791 - 36133592
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  36133791 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 36133702  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||||| ||| | |||||||||  | ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  36133701 tcaatcttgttctaagtcatcctctaatctttagcaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcaac 36133602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 16348470 - 16348311
Alignment:
Q  83 gcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagaca 182  Q
    |||||||||||||||||| ||| || |||||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||   ||||  || ||    
T  16348470 gcgagtacaagccagaattccagcttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaatatcttaaggca 16348371  T
Q  183 ctcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||  |||||||||||| ||||||||||||||| |||||| ||| ||||||||||||    
T  16348370 ctcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattcaacatgctctctg 16348311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 19757427 - 19757347
Alignment:
Q  36 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19757427 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 19757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 19782379 - 19782459
Alignment:
Q  36 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19782379 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 19782459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 17152315 - 17152233
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17152315 gcactcagttctggaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 17152233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 18237170 - 18237345
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||          |||||||    
T  18237170 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt----------ccaggtt 18237259  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  18237260 caatctcgttctaaatcattctataatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 18237345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 23139548 - 23139630
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  23139548 gcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 23139630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 26243493 - 26243411
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26243493 gcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 26243411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 45938425 - 45938507
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45938425 gcacttagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 45938507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 16678415 - 16678335
Alignment:
Q  36 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16678415 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgtt 16678335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 9556809 - 9556890
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  9556809 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 9556890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 11250389 - 11250211
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  11250389 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 11250300  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  11250299 caatcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 11250211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 15353147 - 15352957
Alignment:
Q  21 aacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaa 120  Q
    ||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||  ||||||        
T  15353147 aacattctcaaaagcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactatggttgtt---- 15353052  T
Q  121 actataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaat 220  Q
          ||||||||||||| ||||||||| ||| |  |||||||||||   | ||  ||  |||||||| |||||||||||| ||||||||||| |||||    
T  15353051 ------ccaggttcaatcttgttctaagtcatcctcaaatctttaatacataactaaaggtactcaaaggcatctaaggttcaactcaaaagtccaaaat 15352958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 1951590 - 1951514
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1951590 tgcactcagttctggaagtgctcgcgaagcgagagcatctgctcgccatggcgagtacaagccagattcccaactaa 1951514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 3413078 - 3413156
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  3413078 tcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 3413156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 16243220 - 16243146
Alignment:
Q  42 ttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  16243220 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 16243146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 239
Target Start/End: Original strand, 2015057 - 2015251
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 134  Q
    |||||| |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||          ||||||||    
T  2015057 cactcaattctggaagtgctcgcgaggcgagagcgtctgctcaccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttc 2015146  T
Q  135 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 234  Q
    |||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||||    
T  2015147 aatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgacat 2015246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 222
Target Start/End: Complemental strand, 16351672 - 16351498
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 137  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||          ||| |||||||||||    
T  16351672 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggt----------tattccaggttcaat 16351583  T
Q  138 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    || ||||||| | ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  16351582 cttgttctaaatcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 16351498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 18222205 - 18222124
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  18222205 cactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgtt 18222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 43255990 - 43255927
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43255990 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 43255927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 9530711 - 9530793
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||| |||||||||  |||||||||||||||| |||||||||| |||||||| ||||||    
T  9530711 gcactcagttctggaagtgctcgcgaggtgagagcatcatctcgccatggcgagtataagccagaattccaactaaggttgtt 9530793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 222
Target Start/End: Original strand, 25555798 - 25555972
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 137  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||  |||||| | |||||||   |||||          |||||||||||    
T  25555798 tcagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatgattgtt----------ccaggttcaat 25555887  T
Q  138 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    || ||||||||| ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||| ||||||| |||||||    
T  25555888 cttgttctaagtcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactaaaaagtccaaaatac 25555972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 28569271 - 28569190
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  28569271 cactcaattctggaagtgctcacgaagcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 28569190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 18602569 - 18602491
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| || ||||||    
T  18602569 tcagttttggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagctagaattccaaccaaggttgtt 18602491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 27534303 - 27534365
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  27534303 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 27534365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 4561160 - 4561099
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4561160 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 4561099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 5756764 - 5756703
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5756764 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 5756703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 17047763 - 17047702
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  17047763 cactcaaagacatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctctg 17047702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 18609154 - 18609085
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||| || ||||||    
T  18609154 gaagtgctcgcgaggcgagagcaccagctcgccatggcgagtacaagccagaattccaaccaaggttgtt 18609085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 33742657 - 33742718
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33742657 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 33742718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 14708445 - 14708400
Alignment:
Q  51 tgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14708445 tgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 14708400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 23838724 - 23838793
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  23838724 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 23838793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 42997275 - 42997216
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  42997275 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtacgagcca 42997216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 14679253 - 14679302
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  14679253 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcca 14679302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 14685462 - 14685511
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  14685462 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcca 14685511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 41385560 - 41385491
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| |   |||||||||| ||||||    
T  41385560 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcgaacttcccaactaatgttgtt 41385491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 35614230 - 35614298
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| || || || || |||||||||||||    
T  35614230 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtaccagaca-aaaccaaactaaagttgtt 35614298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 22634023 - 22633983
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  22634023 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 22633983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 3332197 - 3332236
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3332197 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 3332236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 7089191 - 7089242
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  7089191 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 7089242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 13812618 - 13812579
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  13812618 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 13812579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 17047879 - 17047828
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  17047879 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 17047828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 24029053 - 24029092
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  24029053 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 24029092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 13812492 - 13812451
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  13812492 cagacactcaaaggcatctaaggttcaactcaaaagtcaaaa 13812451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 24029183 - 24029220
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||||||||||||| |||||||||||||||    
T  24029183 cactcaaagacatctaaggttcaactcaaaagtcaaaa 24029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 12522372 - 12522424
Alignment:
Q  44 ctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||||||||||||||| ||||| |||| ||  |||||||||||||||||||    
T  12522372 ctagaagtgctcgcgaggtgagagtatctactttccatggcgagtacaagcca 12522424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 12774309 - 12774349
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  12774309 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 12774349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 3096957 - 3097008
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  3096957 ctcgcgaggcgagagcctctgctcgccttggcgagttcaggtcagaatccca 3097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 15190631 - 15190670
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagtaca 91  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  15190631 gctcgcgaggcgagagcctctactcgccatggcgagtaca 15190670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 20157099 - 20157060
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  20157099 agtgctcgcgaggcgagagcctctgcacgccatggcgagt 20157060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 44102525 - 44102560
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||| |||||||||||||||||||    
T  44102525 ctcgcgaggcgagagcctctgctcgccatggcgagt 44102560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 44928729 - 44928694
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||| |||||||||||||||||||    
T  44928729 ctcgcgaggcgagagcctctgctcgccatggcgagt 44928694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 1951451 - 1951414
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  1951451 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 1951414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 13844977 - 13845018
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||| ||||||||||||| ||| |||||||||||    
T  13844977 cagacactcaaaaacatctaaggttcaacttaaaagtcaaaa 13845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 14052992 - 14052951
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  14052992 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 14052951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 14708324 - 14708287
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  14708324 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 14708287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 16243090 - 16243053
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16243090 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16243053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 18222068 - 18222031
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18222068 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18222031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 23139686 - 23139723
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  23139686 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 23139723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 26243355 - 26243318
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26243355 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26243318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 27534441 - 27534482
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||    
T  27534441 actcaaagacatctaaggttcaactcaaaagtcgaaattaca 27534482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 28569134 - 28569097
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  28569134 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 28569097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 43255850 - 43255813
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  43255850 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 43255813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 45938563 - 45938600
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  45938563 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 45938600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 8846688 - 8846724
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  8846688 gctcgcgaggcgagagcctctactcgccatggcgagt 8846724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 15099664 - 15099700
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  15099664 gctcgcgaggcgagagcctctactcgccatggcgagt 15099700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 17053478 - 17053514
Alignment:
Q  186 aaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||| |||||||||||| |||||||||||||||||||    
T  17053478 aaaggcatctaaggttcaactcaaaagtcaaaaatac 17053514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 21815108 - 21815068
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaag 93  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  21815108 ctcgcgaggcgagagcctctactcgccatggcgagttcaag 21815068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 21818530 - 21818490
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaag 93  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  21818530 ctcgcgaggcgagagcctctactcgccatggcgagttcaag 21818490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 42865061 - 42864830
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||     
T  42865061 cacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactagccagattcccaactaat 42864962  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| |||||||||||||||||||| ||||||  || ||  || |||||||| ||||||||||||| |||||||    
T  42864961 gttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcattaataaacaactttaggcactcaaaaacatctaaggttcaactcaaa 42864862  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||||||||||||||||    
T  42864861 agtcaaaaatacagaattctacatgctctctg 42864830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 22831228 - 22830997
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  22831228 cacagatcgcaacattctcaattgcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattctcaactaaa 22831129  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  22831128 gttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 22831029  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| ||||||||||||    
T  22831028 agtcaaaaatacagaattcaacatgctctctg 22830997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 27 - 218
Target Start/End: Original strand, 21714835 - 21715026
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||| ||   || |    
T  21714835 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaa 21714934  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||    
T  21714935 ccaggttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 21715026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 25 - 238
Target Start/End: Complemental strand, 21787878 - 21787665
Alignment:
Q  25 ttctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 124  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||| |||    
T  21787878 ttctcacttgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacgagccagattcccaactaatgttgttataagcta 21787779  T
Q  125 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 224  Q
     ||||||||||||||| |||||||||||||| ||||||||| ||  |||||  || |||||||| ||||||||||||| ||||| |||||||||||||||    
T  21787778 aaccaggttcaatctcattctaagttatcatataatctttattaaacatctttaggcactcaaaaacatctaaggttcaactcacaagtcaaaaatacag 21787679  T
Q  225 atttctacatgctc 238  Q
    | ||| ||||||||    
T  21787678 aattcaacatgctc 21787665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 18181971 - 18181743
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| || |||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  18181971 cacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcaaggcgagagcatctgctcgccatagcgagtacaagccagaattccaactaaa 18181872  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||| |||||||||| ||||| ||||| ||||||  |||||  || ||||||||  |||||||||||| |||||||    
T  18181871 gttgttctaagctaaaccaggttcaatcccgttctaagtcatcatctaatcattaataaacatctttaggcactcaaaagcatctaaggttcaactcaaa 18181772  T
Q  211 agtcaaaaatacagatttctacatgctct 239  Q
    ||||||||||||| | ||| |||||||||    
T  18181771 agtcaaaaatacaaaattcgacatgctct 18181743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 21022902 - 21023138
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| |||||||||| ||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21022902 agcaacacagatcacgacattctcactagtactgagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacgagccagaatcccaa 21023001  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    |||| |||||| ||| ||| ||||||||||||||| |||||||| ||||| ||||||||||||  |||||   | ||||||||  ||| |||||||| ||    
T  21023002 ctaaggttgttctaagctaaaccaggttcaatctcattctaagtcatcatctaatctttaataaacatcttttggcactcaaaagcatttaaggttcaac 21023101  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||| |||||| ||| ||||||||||||    
T  21023102 tcaaaagtcaaaattacagaattcaacatgctctctg 21023138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 27 - 218
Target Start/End: Complemental strand, 22468530 - 22468339
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||| |||||||||| |||||| |||  || |    
T  22468530 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcttcatgtcgagtacaagccagattcccaactaatgttgttctaagttaaa 22468431  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    || ||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||    
T  22468430 cctggttcaatctctttctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 22468339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 6152124 - 6152347
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| || || |||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6152124 cacagatcgcaacatcctaacatgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaatcccaactaaa 6152223  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
     ||||| ||| ||| |||||||||||||   |||||||||||||||||||||||||||  |||||  || ||||||||  || ||||||||| |||||||    
T  6152224 attgttctaagctaaaccaggttcaatcctattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcaactaaggttcaactcaaa 6152323  T
Q  211 agtcaaaaatacagatttctacat 234  Q
     |||||||||||||| ||| ||||    
T  6152324 ggtcaaaaatacagaattcaacat 6152347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 32 - 242
Target Start/End: Complemental strand, 3472755 - 3472545
Alignment:
Q  32 ttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 131  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||| ||||||    
T  3472755 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccagg 3472656  T
Q  132 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttcta 231  Q
    ||||||||| |||||| | ||||| ||||||||||||  |||||     ||||||||  |||||||||||| ||||||||||||||| |||  | ||| |    
T  3472655 ttcaatctcattctaaatcatcatctaatctttaataaacatcttatagcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaattcaa 3472556  T
Q  232 catgctctctg 242  Q
    |||||||||||    
T  3472555 catgctctctg 3472545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 46 - 242
Target Start/End: Complemental strand, 22432598 - 22432402
Alignment:
Q  46 agaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttct 145  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||| ||||| |||||||| |||||    
T  22432598 agaagtgctcgcgaggcgaaagcatctgctcgccatggcgaggacaggccagaatcccaactaaagttgttctaagctaaaccagattcaatcttgttct 22432499  T
Q  146 aagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||  | ||| ||||||||||||    
T  22432498 aagtcatcatctaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacttaattcaacatgctctctg 22432402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 36819137 - 36818938
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  36819137 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 36819048  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | |||||||||||| ||| ||  ||  |||||||| ||| |||||||| ||||||||||||||||  |||| ||| ||    
T  36819047 tcaatcttgttctaaatcatcctctaatctttaataggcacctaaaggtactcaaaggcatttaaggttcaactcaaaagtcaaaaactcagaattcgac 36818948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 8761460 - 8761280
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||| ||| |||  |||||||    
T  8761460 gcactcagttctggaagtgttcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaatccaggtt 8761361  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtc 214  Q
    |||||| ||||||| | ||| | ||||||||||||  | |||  || ||||||||  |||||||||||| |||||||||||    
T  8761360 caatcttgttctaaatcatcctctaatctttaatacacgtctaaaggcactcaaaagcatctaaggttcaactcaaaagtc 8761280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 21305591 - 21305790
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||          ||||||    
T  21305591 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgtt----------ccaggt 21305680  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  ||||  || ||    
T  21305681 tcaatcttgttctaaatcatcctctaatctttagtaaacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaactcgac 21305780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 12647147 - 12647322
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          ||| |||    
T  12647147 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt----------ccaagtt 12647236  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||   ||||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  12647237 caatctcgttctaaatcattccttaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 12647322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 17678432 - 17678343
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 106  Q
    |||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17678432 tcacgacattctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac 17678343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 22449114 - 22449037
Alignment:
Q  13 cagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 90  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22449114 cagatcacaacattctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 22449037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 16080273 - 16080197
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16080273 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaa 16080197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 221
Target Start/End: Complemental strand, 45489571 - 45489394
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  45489571 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactcgccagatttccaactaaggttgtt----------ccaggtt 45489482  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 221  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||||||||||    
T  45489481 caatcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcaaaaata 45489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 241
Target Start/End: Complemental strand, 20228636 - 20228440
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 134  Q
    |||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||          ||||||||    
T  20228636 cactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttc 20228547  T
Q  135 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 234  Q
    |||||| |||||| | ||  |||||||  || || ||| ||  ||| |||||||| ||||||||||||  |||||||||||||||  |||| ||| ||||    
T  20228546 aatctcattctaaatcattctttaatcaatagtaggcacctaaagatactcaaaggcatctaaggttcatctcaaaagtcaaaaactcagaattcgacat 20228447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 33797810 - 33797986
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||          ||||||    
T  33797810 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaattcccaactaaggttgtt----------ccaggt 33797899  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    ||||||| ||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  33797900 tcaatcttgttctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 33797986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 18882645 - 18882820
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||          |||||||    
T  18882645 gcactcagttcttgaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgtt----------ccaggtt 18882734  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  18882735 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 18882820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 24782929 - 24782730
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          ||||||    
T  24782929 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggt 24782840  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | ||||| ||| ||  |||||  ||  |||||||  |||||||||||| |||||||||| |||||  || | ||| ||    
T  24782839 tcaatcttgttctaactcatcctctaatcattagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagttaaaaactcaaaattcgac 24782740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 46975745 - 46975827
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  46975745 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagaaagaatcccaactaaggttgtt 46975827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 19212144 - 19212320
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||||||          ||||||    
T  19212144 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattctcaactaaggttgtt----------ccaggt 19212233  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    ||||||||||||||| | ||  | |||||  || ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  19212234 tcaatctcgttctaattcattctctaatcaatagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 19212320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 23819126 - 23819052
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  23819126 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattcctactaa 23819052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 20138364 - 20138443
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  20138364 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagtcagattcccaactaaggttgtt 20138443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 20091323 - 20091229
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||| ||| || |||| |||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| || | |||||||||||    
T  20091323 cacagatcgcaatatcctcatttgcactcagttctggaagtgctcgcgaggtgagaacatctgctcgccatggcgagttcaggtcagaatcccaa 20091229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 45310194 - 45310016
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||  ||||||          |||||||    
T  45310194 gcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccaggtttccaactacggttgtt----------ccaggtt 45310105  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  ||||||| |||| ||||||||||| |||||||    
T  45310104 caatcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaagttcaactcaaaagtccaaaatac 45310016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 21615718 - 21615777
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21615718 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 21615777  T

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Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 16375284 - 16375223
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16375284 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 16375223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 18393791 - 18393613
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||  | |||||||  ||||||          |||||||    
T  18393791 gcactccgttctataagtgctcgcgaggcgagagcaactgctcgccatggcgagtacaggccaggtttccaactacggttgtt----------ccaggtt 18393702  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  ||||||| |||| ||||||||||| |||||||    
T  18393701 caatcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaagttcaactcaaaagtccaaaatac 18393613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 21407635 - 21407696
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21407635 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 21407696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 52639821 - 52639882
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  52639821 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 52639882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 33049911 - 33049833
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||| |||  |||||| | |||||||| ||||||    
T  33049911 tcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgattacttgccagatttccaactaaggttgtt 33049833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 21438085 - 21438154
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  21438085 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 21438154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 23763502 - 23763571
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  23763502 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 23763571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 21162078 - 21162118
Alignment:
Q  51 tgctcgcgaggcgagagcatctgctcgccatggcgagtaca 91  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  21162078 tgctcgcgaggcgagagcctctgctcgccatggcgagtaca 21162118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 433322 - 433374
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  433322 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 433374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 20918916 - 20918952
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  20918916 gctcgcgaggcgagagcctctgctcgccatggcgagt 20918952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 21754346 - 21754386
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  21754346 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 21754386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 38801081 - 38801041
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaata 221  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  38801081 cactcaaagacatctaaagttcaactcaaaagtcaaaaata 38801041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 33681325 - 33681359
Alignment:
Q  54 tcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||| |||||||||||||||||||    
T  33681325 tcgcgaggcgagagcctctgctcgccatggcgagt 33681359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 19063811 - 19063880
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||||||||||||   || ||||||||||||||||| || ||  |||| |||||| ||||||    
T  19063811 gaagtgctcgcgaggcgagagttcctactcgccatggcgagtaccagtcaatatccaaactaatgttgtt 19063880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 19111701 - 19111770
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||||||||||||   || ||||||||||||||||| || ||  |||| |||||| ||||||    
T  19111701 gaagtgctcgcgaggcgagagttcctactcgccatggcgagtaccagtcaatatccaaactaatgttgtt 19111770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 20138499 - 20138536
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  20138499 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 20138536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 21615853 - 21615890
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21615853 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21615890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 21754477 - 21754518
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||||| |||||||||| || |||||||||||||||||||    
T  21754477 cactcaaaaacatctaaggatcaactcaaaagtcaaaaatac 21754518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 16080134 - 16080074
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||| || |||| ||||||||||||||||  |||| ||| ||||||||||||    
T  16080134 actcaaaggcatccaatgttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 16080074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 20637164 - 20637200
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  20637164 gctcgcgaggcgagagcctctactcgccatggcgagt 20637200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 50210019 - 50209967
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||||||||||| |||||||||| |||||||| || | |||||| ||||    
T  50210019 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaa 50209967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 94)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 856399 - 856635
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  856399 agcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccaaagcgagtacaagccagaataccaa 856498  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    ||||| ||||| ||| ||| | ||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||    
T  856499 ctaaaattgttctaagctaaaacaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaac 856598  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    | |||||||||||||||||| ||| ||||| ||||||    
T  856599 taaaaagtcaaaaatacagaattcaacatgttctctg 856635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 16369671 - 16369907
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| |||| ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16369671 agcaacacatatcacgacattctcacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtacaagccagaatcccaa 16369770  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    ||||||||||| ||| ||| ||||||||||||||  |||||||||||||||||||||||||||  |||||  |  ||||||||  |||||||||||| ||    
T  16369771 ctaaagttgttctaagctaaaccaggttcaatcttattctaagttatcatttaatctttaataaacatctttatgcactcaaaagcatctaaggttcaac 16369870  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||| ||||||| |||||| ||| ||||||||||||    
T  16369871 tcaaaggtcaaaattacagaattcaacatgctctctg 16369907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 12173054 - 12173285
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||  |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12173054 cacagatagcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaataccaactaaa 12173153  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| |||||||| ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  12173154 gttgttctaagctaaaccaggttcaatctcattctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 12173253  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| ||||||||||||    
T  12173254 agtcaaaaatacagaattcgacatgctctctg 12173285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 15060560 - 15060791
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| || ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  15060560 cacagatcgcaacatcctaacttgcaatcagtcctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaag 15060659  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| |||||||    
T  15060660 gttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaa 15060759  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||| ||| ||||||||||||    
T  15060760 agtcaaaattacagaattcaacatgctctctg 15060791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 12496524 - 12496754
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  12496524 acagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaag 12496623  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  12496624 ttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaa 12496723  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  12496724 gtcaaaattacagaattcaacatgctctctg 12496754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 15051784 - 15052015
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||     
T  15051784 cacagatcacaacatcctaacttgcattcagtcctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccgactaag 15051883  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| |||  |||||||||||||| ||||||||||| |||||||||||||||  |||||  || ||||||||  |||||||||||| |||||||    
T  15051884 gttgttctaagctaatccaggttcaatctcattctaagttataatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaa 15051983  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||| |||| |||||| ||| ||||||||||||    
T  15051984 agttaaaattacagaattcaacatgctctctg 15052015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 27 - 218
Target Start/End: Complemental strand, 15877662 - 15877471
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||| ||   || |    
T  15877662 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaa 15877563  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||    
T  15877562 ccaggttcaatctcgtcctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 15877471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 18383766 - 18383536
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||    
T  18383766 acagatcgcaacatactaacttgcattcagttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaattccaacttaag 18383667  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| ||||||||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  18383666 ttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaa 18383567  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  18383566 gtcaaaattacagaattcaacatgctctctg 18383536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 322860 - 323088
Alignment:
Q  14 agatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagtt 113  Q
    ||||| |||||| || ||||||| | |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||    
T  322860 agatcgcaacatactaacttgcatttagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagaattccaacttaagtt 322959  T
Q  114 gttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagt 213  Q
    ||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  |  ||||||||  |||||||||||| ||||||||||    
T  322960 gttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaacgcactcaaaagcatctaaggttcaactcaaaagt 323059  T
Q  214 caaaaatacagatttctacatgctctctg 242  Q
    ||||| |||||| ||| ||||||||||||    
T  323060 caaaattacagaattcaacatgctctctg 323088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 22 - 238
Target Start/End: Complemental strand, 26190848 - 26190632
Alignment:
Q  22 acattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaa 121  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||     
T  26190848 acattctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactcaagttgttataag 26190749  T
Q  122 ctataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 221  Q
    ||| |||||||||||||| ||||||||| | ||| | ||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||| |    
T  26190748 ctaaaccaggttcaatcttgttctaagtcagcatcttatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaaca 26190649  T
Q  222 cagatttctacatgctc 238  Q
    || | ||| ||||||||    
T  26190648 cataattcaacatgctc 26190632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 14878355 - 14878124
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || |||| | |||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  14878355 cacagatcgcaatatcctcaatcgcactcggttctggaagtgctctcgaggcgagaacatctgctcgccatggcgagtacgagccagaattccaactaaa 14878256  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    ||| || ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| |||| |||||||| |||||||    
T  14878255 gttattctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatataaggttcaactcaaa 14878156  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| ||||||||||||    
T  14878155 agtcaaaaatacagaattcgacatgctctctg 14878124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 11298378 - 11298148
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || | ||||| ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| |||    
T  11298378 acagatcgcaacatactaaattgcattcaattctggaagtgctcgcgaggcgagagcatctgatcgccatggcgagtacaagccagatttccaactcaag 11298279  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||| ||||||| | | ||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  11298278 ttgttctaagctaaaccaggttcaatcttgttctaaatcagcatctaatctttaataaacatctaaaggcactcaaaagcatctaaggttcaactcaaaa 11298179  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||| ||| ||||||||||||    
T  11298178 gtcaaaaatacagaattcaacatgctctctg 11298148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 218
Target Start/End: Complemental strand, 12037797 - 12037596
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  12037797 tcacgacattctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcggctcgccatggcgagtacaagccagaattccaactaatgttgtt 12037698  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
      || ||  ||||||||||||||| ||||||||  |||| ||||||||||||||||||| ||| |||||||| ||||||||||||  ||||| | |||||    
T  12037697 caaagcttaaccaggttcaatctcattctaagtcttcatctaatctttaatatgcatcttcaggcactcaaaaacatctaaggtttaactcacatgtcaa 12037598  T
Q  217 aa 218  Q
    ||    
T  12037597 aa 12037596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 23408701 - 23408907
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |      
T  23408701 cacagatcgcaatatcctcacttgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcaagattcccaacaatg 23408800  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||   || ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||| | | ||||||||||| |||||||    
T  23408801 gttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaataggcatcttcaggcactcata-atatctaaggttcaactcaaa 23408899  T
Q  211 agtcaaaa 218  Q
    ||||||||    
T  23408900 agtcaaaa 23408907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 19725761 - 19725531
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  19725761 acagatcgcaacatcctaacttgtattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagaatcccaactaagg 19725662  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||||||||||  | ||||| ||||||||| |   |||||  || ||| ||||  ||| |||||||| ||||||||    
T  19725661 ttgttctaagctaaaccaggttcaatctcgttctagatcatcatctaatctttattcaacatcttaaggcacacaaaagcatttaaggttcaactcaaaa 19725562  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||  | ||| ||||||||||||    
T  19725561 gtcaaaattacgaaattcaacatgctctctg 19725531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 23077328 - 23077097
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || |||| ||| | || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||    
T  23077328 cacagatcgcaaaatcctcaattgaaatcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacctaa 23077229  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| || ||||||||||||  |||  || ||||| ||||||||||||  |||||  || ||||||||  |||| ||||||| |||||||    
T  23077228 gttgttctaagctaaactaggttcaatctcactctgtgtcatcatctaatctttaataaacatcttaaggcactcaaaagcatccaaggttcaactcaaa 23077129  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| ||||||||||||    
T  23077128 agtcaaaaatacagaattcaacatgctctctg 23077097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 23052917 - 23052696
Alignment:
Q  21 aacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaa 120  Q
    ||||| |||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||    
T  23052917 aacatcctcacttgcattcaattctgcaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaa 23052818  T
Q  121 actataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaat 220  Q
     ||  || || ||||||||| ||||||||   ||| |||| |||||||||||||  ||| |||||||| ||||||||||||| ||||| | |||||||      
T  23052817 gcttaactagtttcaatctcattctaagtctccatctaatatttaatatgcatcatcaggcactcaaaaacatctaaggttcaactcacaggtcaaaatc 23052718  T
Q  221 acagatttctacatgctctctg 242  Q
    ||| | ||| ||||||||||||    
T  23052717 acaaaattcaacatgctctctg 23052696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 12 - 239
Target Start/End: Original strand, 11851842 - 11852067
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||||| |||||| ||||||||  ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  11851842 acagatcgcaacatcctaacttgcacttagttctggaagtgcttacgaggcgagagcatctgatcgccatggcgagttcaagccagaattccaactaaag 11851941  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||   ||||  || ||||||||  |||||||||||| ||| ||||    
T  11851942 ttgttataagcta-accaggttcaatctcgttctaaatcatcatctaatctttaata-aaatcttaaggcactcaaaagcatctaaggttcaactgaaaa 11852039  T
Q  212 gtcaaaaatacagatttctacatgctct 239  Q
    || |||| |||  | ||| |||||||||    
T  11852040 gttaaaattacgaaattcaacatgctct 11852067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 86 - 241
Target Start/End: Complemental strand, 17524949 - 17524794
Alignment:
Q  86 agtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactc 185  Q
    ||||||||||||| |||| ||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||  || ||  || |||||    
T  17524949 agtacaagccagattccctactaatgttgttttaaactaaaccaggttcaatctcattctaatttatcatttaatctttaataaccacctttaggcactc 17524850  T
Q  186 aaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 241  Q
    ||| ||||||||||||| ||||||||||||||||||| || |||||||||||||||    
T  17524849 aaaaacatctaaggttcaactcaaaagtcaaaaatactgaattctacatgctctct 17524794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 241
Target Start/End: Complemental strand, 321789 - 321634
Alignment:
Q  86 agtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactc 185  Q
    |||||| || ||| |||||||||| |||||| ||| ||| ||||||||||||||| |||||||||||||||||| ||||||||  |||||  || |||||    
T  321789 agtacaggctagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaacctttaataaacatctttaggcactc 321690  T
Q  186 aaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 241  Q
    ||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  321689 aaaaacatctaaggttcaactcaaaagtcaaaaatacagaattctacatgctctct 321634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 242
Target Start/End: Complemental strand, 326992 - 326794
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          |||||||    
T  326992 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggtt 326903  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 233  Q
    |||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| |||    
T  326902 caatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgaca 326803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 11863060 - 11863215
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||||||| || | ||||| ||  |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  11863060 acagatcgcaacatcctaacttgcactcaattttggaagtacttacgaggcgagagcatctgctcgccatggcgagttcaagccagaattccaactaaag 11863159  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaata 168  Q
    | ||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||    
T  11863160 tagttctaagcta-accaggttcaatctcgttctaaatcatcatctaatctttaata 11863215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 16910013 - 16910105
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 98  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16910013 agcaacacagatcatgacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 16910105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 7793175 - 7792976
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  7793175 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 7793086  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  || | ||| ||    
T  7793085 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcataattcgac 7792986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 15482939 - 15483138
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||          ||||||    
T  15482939 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccaaactaaggttgtt----------ccaggt 15483028  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||  | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  15483029 tcaatcttgttctaaatcattctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 15483128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 238
Target Start/End: Complemental strand, 15849914 - 15849719
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||          ||||||    
T  15849914 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaccaaggttgtt----------ccaggt 15849825  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | ||||| ||| || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  15849824 tcaatcttgttctaaatcatcctctaatcattagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 15849725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 20461329 - 20461130
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||          ||||||    
T  20461329 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcctaactaaggttgtt----------ccaggt 20461240  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | | ||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  20461239 tcaatcttgttctaaatcatcctctgatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 20461140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 222
Target Start/End: Complemental strand, 1982636 - 1982460
Alignment:
Q  36 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttca 135  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||          |||||||||    
T  1982636 actcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttca 1982547  T
Q  136 atctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||| ||||||| | ||| | ||||||||| ||  |||||  ||  ||||||| ||||||||||||| ||||||||||| |||||||    
T  1982546 atcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaaacatctaaggttcaactcaaaagtccaaaatac 1982460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 1598308 - 1598226
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1598308 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 1598226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 17242250 - 17242425
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          |||||||    
T  17242250 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt----------ccaggtt 17242339  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  17242340 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 17242425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 31097383 - 31097184
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||| || |||          ||||||    
T  31097383 tgcactcagttctggaagtgctcgcgaggcggtagcatctgctcgccatggcgagtacaagccagattcccaactaaggtcgtt----------ccaggt 31097294  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||  | ||||||||| || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  31097293 tcaatcttgttctaaatcattctctaatctttagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 31097194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 38814662 - 38814744
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38814662 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 38814744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 16797883 - 16797800
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  16797883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 16797800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 242
Target Start/End: Complemental strand, 3402777 - 3402585
Alignment:
Q  40 agttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatct 139  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||          |||||||||||||    
T  3402777 agttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactacggttgtt----------ccaggttcaatct 3402688  T
Q  140 cgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctct 239  Q
     ||||||||| ||| | ||||||||||||  || ||  || ||||||||  |||||||||||| ||||||||||||||| |||| | ||| ||| |||||    
T  3402687 tgttctaagtcatcctctaatctttaatacacaactaaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaattcgacaagctct 3402588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 16808710 - 16808627
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  16808710 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 16808627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 15941732 - 15941658
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 108  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15941732 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacta 15941658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 11594967 - 11594789
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  11594967 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 11594878  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  11594877 caatcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 11594789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 3833952 - 3834127
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||          ||||    
T  3833952 gcactcaaatctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaaccaaggttgttcta----------ggtt 3834041  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  ||||||||||||||||||||| ||||||||||||||||    
T  3834042 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaagacatctaaggttcaactcaaaagtcaaaaa 3834127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 11300339 - 11300257
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11300339 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 11300257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 2897652 - 2897569
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||    
T  2897652 tgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgtcatgtcgagtacaagccagattcccaactaaggttgtt 2897569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 42326222 - 42326304
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||    
T  42326222 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt 42326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 16697071 - 16697152
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||    
T  16697071 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagctttccaactaaggttgtt 16697152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 16690498 - 16690579
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  | |||||||| ||||||    
T  16690498 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaaaagccagctttccaactaaggttgtt 16690579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 20723292 - 20723361
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||    
T  20723292 gaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagccagcttcccaactaatgttgtt 20723361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 7109981 - 7110042
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7109981 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 7110042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 7113916 - 7113977
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7113916 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 7113977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 11855015 - 11855088
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 108  Q
    ||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  11855015 cactcagttctggatttgctcgcgaggtgagagcatctgctcgccatggcgagtacaagccagcttcccaacta 11855088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 22337002 - 22337063
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22337002 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 22337063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 27409470 - 27409409
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27409470 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 27409409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 11557208 - 11557132
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttg 114  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||  |||||| | |||||||| ||||    
T  11557208 tcagttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtacttgccagatttccaactaaggttg 11557132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 15617656 - 15617717
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  15617656 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaagcca 15617717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 22321959 - 22322008
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22321959 gaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 22322008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 24188068 - 24188137
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  24188068 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 24188137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 55149256 - 55149338
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||  ||| ||||||||||||||||||||| |||| ||||||||||||||||||| |||   |||||||||| ||||||    
T  55149256 gcactcaaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaatccaacttcccaactaatgttgtt 55149338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 28950007 - 28950068
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  28950007 cactcaattctggaagtgctcacggggcgagagcatctgctcgccgtggcgagtacaagcca 28950068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 16862979 - 16862926
Alignment:
Q  63 gagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||| ||||||    
T  16862979 gagagcatctgctcgccatggcgagtacaagccaaatccccaactaaggttgtt 16862926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 3389691 - 3389600
Alignment:
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||||||| |||||| || ||| | ||||||||||||  || ||  || ||||||||  |||||||||||| |||||||||||||||    
T  3389691 ccaggttcaatcttgttctatgtcatcctctaatctttaatacacaactaaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaa 3389600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 12340064 - 12340103
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  12340064 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 12340103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 839537 - 839583
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 93  Q
    ||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  839537 gaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaag 839583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 3389780 - 3389719
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgc 78  Q
    |||| |||||||||   ||||| |||||| ||||||||||| ||||||||||||||||||||    
T  3389780 tcacgacattctcaaaagcacttagttctggaagtgctcgcaaggcgagagcatctgctcgc 3389719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 28350976 - 28350935
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  28350976 gaagtgctcgcgaggcgagagtatctactcgccatggcgagt 28350935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 1644493 - 1644453
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  1644493 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 1644453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 12852174 - 12852134
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  12852174 aagtgctcgcgaggcaagagcctctgctcgccatggcgagt 12852134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 13210138 - 13210098
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  13210138 aagtgctcgcgaggcgagagcctctactcgccatggcgagt 13210098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 16690635 - 16690675
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  16690635 actcaaaggcatctaaggttcaactcaaaagtcaaaaatac 16690675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 16697208 - 16697248
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  16697208 actcaaaggcatctaaggttcaactcaaaagtcaaaaatac 16697248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 17248092 - 17248040
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  17248092 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 17248040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 30030266 - 30030306
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaa 217  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  30030266 cagacactcaaaggcatctaaggttcaactcaaaagtcaaa 30030306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 32307979 - 32308019
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  32307979 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 32308019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 49667894 - 49667854
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  49667894 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 49667854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 14665917 - 14665956
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  14665917 agtgctcgcgaggcgagagcctctgctcgccattgcgagt 14665956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 14669072 - 14669111
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  14669072 agtgctcgcgaggtgagagcctctgctcgccatggcgagt 14669111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 14735430 - 14735469
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  14735430 agtgctcgcgaggcgagagcctctgctcgccattgcgagt 14735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 17525002 - 17524951
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggc 62  Q
    |||||||| ||| || ||||||||||||||||| | ||||||||||||||||    
T  17525002 cacagatcgcaatatcctcacttgcactcagttttggaagtgctcgcgaggc 17524951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 20698243 - 20698192
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  20698243 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 20698192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 26687201 - 26687252
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  26687201 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 26687252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 30030153 - 30030188
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||| |||||||||||||||||||    
T  30030153 ctcgcgaggcgagagcctctgctcgccatggcgagt 30030188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 20698130 - 20698084
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    ||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  20698130 cagacactcaaaagcatctaaggttcaactcaaaagtcaaaattaca 20698084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 4588494 - 4588457
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  4588494 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 4588457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 7986001 - 7986046
Alignment:
Q  51 tgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||    
T  7986001 tgctcgcgaggcgagagtacctactcgccatggcgagttcaagcca 7986046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 12340194 - 12340231
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  12340194 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 12340231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 13210007 - 13209966
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  13210007 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 13209966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 14179764 - 14179805
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  14179764 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 14179805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 14666047 - 14666084
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  14666047 cactcaacgacatctaaggttcaactcaaaagtcaaaa 14666084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 14669202 - 14669239
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  14669202 cactcaacgacatctaaggttcaactcaaaagtcaaaa 14669239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 14735560 - 14735597
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  14735560 cactcaacgacatctaaggttcaactcaaaagtcaaaa 14735597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 15941594 - 15941557
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15941594 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15941557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 16797744 - 16797707
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16797744 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16797707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 16809724 - 16809765
Alignment:
Q  63 gagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||||||||||||| || | ||||||||||    
T  16809724 gagagcatctgctcgccatggcgagttcaggtcagaatccca 16809765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 17674255 - 17674194
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||  |||||||||||| ||||||||||||||| |||  | ||| ||||||||||||    
T  17674255 cactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaattcaacatgctctctg 17674194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 38814800 - 38814837
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  38814800 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 38814837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 11557129 - 11557037
Alignment:
Q  128 caggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaat 220  Q
    |||||||||||| ||||||| | ||| | ||||||||||||  |||||   |  |||||||  |||||||||||| ||||||||||| |||||    
T  11557129 caggttcaatcttgttctaaatcatcctctaatctttaataaacatctatgggtactcaaaagcatctaaggttcaactcaaaagtccaaaat 11557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 12934121 - 12934081
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||  |||||||||||||||||||    
T  12934121 aagtactcgcgaggcgagagtctctgctcgccatggcgagt 12934081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 14499606 - 14499662
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 90  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  14499606 gcactcaattctagatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 14499662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 13032 - 13258
Alignment:
Q  16 atcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgt 115  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |    
T  13032 atcacaacattctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacgagccataatcccaactaaagttat 13131  T
Q  116 tttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtca 215  Q
    | ||| ||| ||||||||||||||| ||||| |||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||    
T  13132 tctaagctaaaccaggttcaatctcattctatgttatcatttaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtca 13231  T
Q  216 aaaatacagatttctacatgctctctg 242  Q
    |||||||| | ||| ||||||||||||    
T  13232 aaaatacataattcaacatgctctctg 13258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 61439 - 61378
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  61439 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 61378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 65348 - 65294
Alignment:
Q  42 ttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  65348 ttctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgaatacaagcca 65294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 2140 - 2376
Alignment:
Q  6 agcagcacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2140 agcaacacagatcataacattctcacttgcactcagttctcgaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaatcccaa 2239  T
Q  106 ctaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctac 205  Q
    ||||| ||||| ||| ||| |||||||||||||||  |||| ||| |||||||||||||||||  |||||  || ||||||||  |||||||||||| ||    
T  2240 ctaaaattgttctaagctaaaccaggttcaatctcagtctaggttctcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaac 2339  T
Q  206 tcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||| |||||||||||||| ||| ||||| ||||||    
T  2340 tcaaaggtcaaaaatacagaattcaacatgttctctg 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 6372 - 6603
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  6372 cacagatcgcaacatcctcacttgcacacagttctggaagtgctcgcgaggagagagcatctgctcgccatggcgagtacaagccagattcccaactaaa 6471  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  ||  |  ||  ||||||| ||||||||||||| |||||||    
T  6472 gttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaacaaatttaggaactcaaaaacatctaaggttcaactcaaa 6571  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||| | ||| ||||||||||||    
T  6572 agtcaaaaatacaaaattcaacatgctctctg 6603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 1934 - 1703
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  1934 cacagatcacaacattctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaactaaa 1835  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||    
T  1834 gttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaatacacatcttaaggcactcaaaagcatctaaggttcaactcaaa 1735  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
     ||||||| |||| | ||| ||||||||||||    
T  1734 ggtcaaaattacaaaattcgacatgctctctg 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 6928 - 6697
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6928 cacagatcgcaacattctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaa 6829  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||| |    ||||  || |||||||| ||||||||||||| |||||||    
T  6828 gttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttatttattatctttaggcactcaaaaacatctaaggttcaactcaaa 6729  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| ||| ||||||||||||    
T  6728 agtcaaaaatacagaattcgacatgctctctg 6697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 138; Significance: 3e-72; HSPs: 6)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 34746 - 34529
Alignment:
Q  25 ttctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 124  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||    
T  34746 ttctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagcta 34647  T
Q  125 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 224  Q
     |||||||||||||||  ||||||| ||||| |||||||||| |   ||||  || |||||||| ||||||||||||| ||||| |||||||||||||||    
T  34646 aaccaggttcaatctcactctaagtcatcatctaatctttaaaaaaaatcttaaggcactcaaaaacatctaaggttcaactcacaagtcaaaaatacag 34547  T
Q  225 atttctacatgctctctg 242  Q
    | ||||||||||||||||    
T  34546 aattctacatgctctctg 34529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 41403 - 41181
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||  |||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||||||    
T  41403 cacagatcgcaaagttctcacttgcactcagttctaaaagtgctcacgaggtgaaagcatctgctcgccatggcgagtacaagccagattcccaactaaa 41304  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| || ||||||||||||  ||||||| ||||| ||||||||||||   ||||  || ||||||||  |||||||||||| ||||| |    
T  41303 gttgttctaagctaaactaggttcaatctcactctaagtcatcatctaatctttaataaatatctttaggcactcaaaatcatctaaggttcaactcaca 41204  T
Q  211 agtcaaaaatacagatttctaca 233  Q
    ||||||||||||||| |||||||    
T  41203 agtcaaaaatacagaattctaca 41181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 64131 - 64213
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  64131 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 64213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 76015 - 76097
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  76015 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaatcctaactaaggttgtt 76097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 64269 - 64306
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  64269 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 64306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 76153 - 76190
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  76153 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 76190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 27 - 218
Target Start/End: Original strand, 36743 - 36934
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||| |||  || |    
T  36743 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaagttaaa 36842  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||    
T  36843 ccaggttcaatctcattctaagttatcatataatctttaataagcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 36934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 8791 - 8576
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||| ||   || |    
T  8791 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaatgttgttctaggttaaa 8692  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||| |||  ||||||| ||||||||||||| ||||||| ||||||||||| ||     
T  8691 ctaggttcaatctcgttctaagttatcatttaatctttaataggcatcttcagggactcaaaaacatctaaggttcaactcaaaggtcaaaaataccgaa 8592  T
Q  227 ttctacatgctctctg 242  Q
    || |||||||||||||    
T  8591 ttttacatgctctctg 8576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 136; Significance: 5e-71; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 70065 - 70272
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||     
T  70065 cacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaag 70164  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    | |||| ||   || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||    
T  70165 gctgttctaggttaaaccaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaa 70264  T
Q  211 agtcaaaa 218  Q
    ||||||||    
T  70265 agtcaaaa 70272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 10413 - 10214
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  10413 tgcactcatttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 10324  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  10323 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 10224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 58233 - 58164
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  58233 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 58164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 1760 - 1990
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  1760 acagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaag 1859  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||    
T  1860 ttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaa 1959  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  1960 gtcaaaattacagaattcaacatgctctctg 1990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 4696 - 4927
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  4696 cacagttcacaacattctcacttgaactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaaataaa 4795  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  ||| |||||||| |||||||    
T  4796 gttgttctaagctaaaccaggttcaatcttgttctaagtcatcatctaatctttaataaacatctttaggcactcaaaagcatttaaggttcaactcaaa 4895  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| ||||||  |  ||||||||||||    
T  4896 agtcaaaattacagaacttcacatgctctctg 4927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 3108 - 3339
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    ||||||||||||||| ||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||    
T  3108 cacagatcacaacatcctatcttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattccaacttaa 3207  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||| ||||||| ||||| |||||||||||||||||||||  |||||  || ||||||||  |||||||||||| |||||||    
T  3208 gttgttctaagctaaaccaggtgcaatctcattctaggttatcatttaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaa 3307  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||  ||| ||||||||||||    
T  3308 agtcaaaaatacaggattcaacatgctctctg 3339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 6774 - 7005
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    ||||||||||||||| ||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||    
T  6774 cacagatcacaacatcctatcttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagccagaattccaacttaa 6873  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||||||| ||||||| ||||| |||||||||||||||||||||  |||||  || ||||||||  |||||||||||| |||||||    
T  6874 gttgttctaagctaaaccaggtgcaatctcattctaggttatcatttaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaa 6973  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||| ||| | ||| ||||||||||||    
T  6974 agtcaaaaaaacaaaattcaacatgctctctg 7005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 79)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 21739872 - 21739641
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||     
T  21739872 cacagatcgcaacattctcaattgtactcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaat 21739773  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||| ||  |||||  || |||||||| ||||||||||||| |||||||    
T  21739772 gttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttagtaaacatctttaggcactcaaaaacatctaaggttcaactcaaa 21739673  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||| ||||| ||| ||||||||||||    
T  21739672 agtcaaaaaaacagaattcaacatgctctctg 21739641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 22432521 - 22432733
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  22432521 cacagatcgcaatatactaacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaaa 22432620  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    ||||||  |   || || ||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||| ||||||||||||| |||||||    
T  22432621 gttgttcaaggttaaactaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcatgcactcaaaaacatctaaggttcaactcaaa 22432720  T
Q  211 agtcaaaaataca 223  Q
    |||||||| ||||    
T  22432721 agtcaaaactaca 22432733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 19863249 - 19863456
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||     
T  19863249 cacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaag 19863348  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||   || || |||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||    
T  19863349 gttgttctaggttaaacaaggttcaatctcattctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaa 19863448  T
Q  211 agtcaaaa 218  Q
    ||||||||    
T  19863449 agtcaaaa 19863456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 22439071 - 22439283
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| || |||    
T  22439071 cacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagattccctacaaaa 22439170  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||   || || ||||||||||||||| ||||||||||||||| ||||||||| ||||| ||| |||||||| ||||||||||||| |||||||    
T  22439171 gttgttctaggttaaactaggttcaatctcgttataagttatcatttaagctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaa 22439270  T
Q  211 agtcaaaaataca 223  Q
    |||||||| ||||    
T  22439271 agtcaaaattaca 22439283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 25642017 - 25641802
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| || |||||| ||   || |    
T  25642017 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagttcaagccagattcccaacaaaggttgttctatgttaaa 25641918  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| ||||||||||| ||| |||| |     
T  25641917 ctaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtccaaactacaaaa 25641818  T
Q  227 ttctacatgctctctg 242  Q
    |  |||||||||||||    
T  25641817 tcttacatgctctctg 25641802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 21834739 - 21834509
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||| ||||||||||    
T  21834739 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctactcgccatggtgattacaagccagaattccaactaaag 21834640  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| | |||||||||||||||||||| | ||||| ||||||||||||  ||| |  || ||||||||  |||||||||||| ||||||||    
T  21834639 ttgttctaagctaaatcaggttcaatctcgttctaaatcatcatctaatctttaataaacatttttaggcactcaaaagcatctaaggttcaactcaaaa 21834540  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||||| ||| ||||||||||||    
T  21834539 gtcaaaaatacagaattcaacatgctctctg 21834509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 16523252 - 16523022
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||    
T  16523252 acagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacttaag 16523153  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||| ||| ||||| |||||||||||||||| | || || ||||||||||||  |||||  || | ||||||  |||||||||||| ||||||||    
T  16523152 ttgttctaagctaaaccagattcaatctcgttctaaatcattatctaatctttaataaacatcttaaggcgctcaaaagcatctaaggttcaactcaaaa 16523053  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||| |||||| ||| ||||||||||||    
T  16523052 gtcaaaattacagaattcaacatgctctctg 16523022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 18907377 - 18907609
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||| | |||||||||    
T  18907377 cacagatcgcaacattctcatttgcactctgttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgaaatcaagccagatttccaactaaa 18907476  T
Q  111 gttgttttaaactataccaggttcaatctcgttcta-agttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaa 209  Q
    |||||| ||| |||  |||||||||||||| |||||  ||||||| |||||||||||||  |||||  ||  ||||||| ||||||||||||| ||||||    
T  18907477 gttgttctaagctaagccaggttcaatctcattctagggttatcagttaatctttaatacacatctgaaggtactcaaaaacatctaaggttcaactcaa 18907576  T
Q  210 aagtcaaaaatacagatttctacatgctctctg 242  Q
    | || ||||||||||| ||| ||||||||||||    
T  18907577 aggtaaaaaatacagaattcgacatgctctctg 18907609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 22059587 - 22059396
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||||    
T  22059587 tcacgacattctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattcaacctaatgttgtt 22059488  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 208  Q
     ||| ||| |||||||||||||| ||||||| | || || ||||||||||||||||||| ||| |||||||| ||||||||||||| |||||    
T  22059487 ctaagctaaaccaggttcaatcttgttctaaatcattatctaatctttaatatgcatcttcaggcactcaaaaacatctaaggttcaactca 22059396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 218
Target Start/End: Original strand, 18180764 - 18180965
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||||||||  |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||||||    
T  18180764 tcacgacattctcaaatgcattcagttctggaagtgctcgcgaggcgagagcatctgctctccatggcgagtacaagccagatttccaactcaagttgtt 18180863  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
     ||  ||| |||||||||| |||| |||||| | ||| | ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||||||||    
T  18180864 ctatgctaaaccaggttcactctcattctaaatcatcctctaatctttaataaacatcttaaggcactcaaaaacatctaaggttcaactcaaaagtcaa 18180963  T
Q  217 aa 218  Q
    ||    
T  18180964 aa 18180965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 15041384 - 15041169
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    |||||||||||||| |||| |||||| | |||||||||||||||||||||| ||||||||||||||| |||| ||||||| | ||||||| ||   ||      
T  15041384 ctcacttgcactcaattctggaagtggttgcgaggcgagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 15041285  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    |||||||||||||| |||||||||||||| ||| ||||| ||  ||||| ||| |||||||| |||||||||||   ||||||||||||||| |||| |     
T  15041284 ccaggttcaatctcattctaagttatcatctaacctttattaaacatcttcaggcactcaaaaacatctaaggtataactcaaaagtcaaaattacaaaa 15041185  T
Q  227 ttctacatgctctctg 242  Q
    ||| ||||||||||||    
T  15041184 ttcaacatgctctctg 15041169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 17804474 - 17804673
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  17804474 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 17804563  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  17804564 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 17804663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 22429859 - 22429660
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||          ||||||    
T  22429859 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccagctaaggttgtt----------ccaggt 22429770  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  || |||||| |  |||||||||||| ||||||||||||||||  |||| ||| ||    
T  22429769 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggcactcagaagcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 22429670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 16965160 - 16964957
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||||||  |  |||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||        
T  16965160 cacagatcacattaaactcacttgcactaagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacaagccagacttccaacattg 16965061  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
     ||||| ||   ||  |||||| ||||||||| |||||||||| |  | |||||| || |||||| ||| ||||||||| |||||||||||| |||||||    
T  16965060 attgttctaggttaatccaggtccaatctcgtcctaagttatcttcaattctttattaagcatcttcaggcactcaaagccatctaaggttcaactcaaa 16964961  T
Q  211 agtc 214  Q
    ||||    
T  16964960 agtc 16964957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 217
Target Start/End: Complemental strand, 22405873 - 22405709
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttat 152  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| | ||| || |||||||| ||| ||| || ||||||||||||||||||| | ||    
T  22405873 ctcgcgaggcgaaagcatctgctcgccatggcgagtacaacccagatttccatctcaagttgttctaagctaaacaaggttcaatctcgttctaaatcat 22405774  T
Q  153 catttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaa 217  Q
    |||  |||||||| ||  |||||| || ||||| ||  |||||||||||| ||||||||||||||    
T  22405773 catccaatctttattaaacatctcaaggcactctaaagcatctaaggttcaactcaaaagtcaaa 22405709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 5616642 - 5616467
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||          |||||||    
T  5616642 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt----------ccaggtt 5616553  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  5616552 caatctcgttctaaatcattctataatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 5616467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 12496586 - 12496668
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12496586 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 12496668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 19873391 - 19873483
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 103  Q
    |||||||| ||| || || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19873391 cacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccc 19873483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 214
Target Start/End: Complemental strand, 16924713 - 16924526
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||     || || ||   ||      
T  16924713 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttccaacattgattattctaggttaat 16924614  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtc 214  Q
    |||||| |||||| || ||||||||||||  | |||||| || |||||| |||  |||||||| |||||||||||| ||| |||||||    
T  16924613 ccaggtccaatcttgtcctaagttatcatcaattctttattaagcatcttcaggaactcaaaggcatctaaggttcaactaaaaagtc 16924526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 12706966 - 12707048
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||    
T  12706966 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgtt 12707048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 27415771 - 27415596
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  27415771 tgcactcaattctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 27415682  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||| ||||||| | ||| | |||| | || ||  || ||  ||  ||||||||||||||||||||| |||||||||||||||    
T  27415681 tcaatcttgttctaattaatcctctaatatctagtagacacctaaaggtactcaaagacatctaaggttcaactcaaaagtcaaaa 27415596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 1587558 - 1587477
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  1587558 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 1587477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 18955591 - 18955509
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  18955591 gcactcaattcgagaagtgctcgcgaggcgagagcatctgctcgtcatggcgagtacaagccagattcccaactaaggttgtt 18955509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 19663046 - 19663221
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||          |||||||    
T  19663046 gcactcagttttggaagtgctcgcgaggcgatagcatctgctcgccatggcgagtacaagccagaatcccaacaaaggttgtt----------ccaggtt 19663135  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  19663136 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 19663221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 22592628 - 22592550
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  22592628 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatttcaactaaggttgtt 22592550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 242
Target Start/End: Original strand, 1644983 - 1645181
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    ||||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||          |||||||    
T  1644983 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggtt 1645072  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 233  Q
    ||||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| ||| |||||||| ||||||||||||||||  |||| ||| |||    
T  1645073 caatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatataaggttcaactcaaaagtcaaaaactcagaattcgaca 1645172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 16741484 - 16741548
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 98  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16741484 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 16741548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 25766997 - 25766914
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  25766997 tgcaatcagttctagaatggctcgtgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 25766914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 222
Target Start/End: Complemental strand, 19790603 - 19790429
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 137  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||  |||||| | |||||||  ||||||          |||||||||||    
T  19790603 tcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt----------ccaggttcaat 19790514  T
Q  138 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    || ||||||||| ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||| ||||||| |||||||    
T  19790513 cttgttctaagtcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactaaaaagtccaaaatac 19790429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 23657248 - 23657070
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||  ||||||          |||||||    
T  23657248 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccaggtttccaactacggttgtt----------ccaggtt 23657159  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||| ||||||| | ||||| ||||||| | ||  |||||  ||  |||||||  ||||||| |||| ||||||||||| |||||||    
T  23657158 caatcttgttctaaatcatcatctaatcttaagtagacatctaaaggtactcaaaagcatctaaagttcaactcaaaagtccaaaatac 23657070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 27567436 - 27567355
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||    
T  27567436 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt 27567355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 20803377 - 20803306
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  20803377 tcagttatggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaa 20803306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 21702568 - 21702647
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| ||||||    
T  21702568 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaatttccaactaaggttgtt 21702647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 14472548 - 14472630
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| ||||||    
T  14472548 gcactcaattctggatgtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccaaattcccaactaaggttgtt 14472630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 20907822 - 20907631
Alignment:
Q  21 aacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaa 120  Q
    ||||||||||   |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||        
T  20907822 aacattctcaaaagcactcagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt---- 20907727  T
Q  121 actataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaat 220  Q
          | ||||||||||| ||||||||| ||| | |||||| |||||  |||||  ||  | |||||  |||||||||||| ||||||||||| |||||    
T  20907726 ------ctaggttcaatcttgttctaagtcatcctctaatctataatacacatctaaaggtattcaaaagcatctaaggttcaactcaaaagtccaaaat 20907633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 22334741 - 22334647
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||| ||| || |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||  | | |||||||||||    
T  22334741 cacagatcgcaatatcctcacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtttaggtcagaatcccaa 22334647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 18917093 - 18917012
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| | | |||||||| ||||||    
T  18917093 cactcaattctagaagtgctcgcgaggcgagaacatctgctcgccgtggcgagtacaagccaaatttccaactaaggttgtt 18917012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 27553435 - 27553265
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||  |||||| | |||||||| ||||||          |||||||    
T  27553435 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgtgtacttgccagatttccaactaaggttgtt----------ccaggtt 27553346  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtc 214  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  ||||||| ||||| ||||||| |||||||||||    
T  27553345 caatcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaaacatccaaggttcaactcaaaagtc 27553265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 242
Target Start/End: Complemental strand, 9482120 - 9481923
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 134  Q
    |||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||  |||||||||| ||||||          ||||||||    
T  9482120 cactcaattctggaagtgctcgcgaggcgagagcatatgctcgtcatggcaagtacaagccaggttcccaactaaggttgtt----------ccaggttc 9482031  T
Q  135 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 234  Q
    |||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| |||||||| |||||||  |||| ||| ||||    
T  9482030 aatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaactcaaaaactcagaattcgacat 9481931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 15894265 - 15894185
Alignment:
Q  25 ttctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||| || | |||||||||||    
T  15894265 ttctcacttgcactcagttctggaagtgctcgcgaggtgagagactctgctcgccatggcgagttcaggtcagaatcccaa 15894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 16929421 - 16929242
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||   | ||||| ||   ||  ||||||     
T  16929421 gcactcagttttcaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttccaacattaattgttctaggttaatccaggtc 16929322  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtc 214  Q
    ||||||| | | ||||||||||  | |||||| || |||||| ||| ||||| ||| |||||||||||  |||||||||||    
T  16929321 caatctcatcccaagttatcatcaattctttattaagcatcttcaggcactc-aaggcatctaaggtttaactcaaaagtc 16929242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 22863224 - 22863286
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22863224 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 22863286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 25135492 - 25135438
Alignment:
Q  42 ttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25135492 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 25135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 8244140 - 8244201
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8244140 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 8244201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 11567142 - 11567203
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11567142 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 11567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 19870870 - 19870931
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19870870 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 19870931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 23395348 - 23395409
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23395348 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 23395409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 12618671 - 12618610
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  12618671 cactcaattctggaagtgctcgcgaggcgagagcatctgctcaccgtggcgagtacaagcca 12618610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 23990200 - 23990261
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  23990200 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgtcgtggcgagtacaagcca 23990261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 31164681 - 31164611
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccag 97  Q
    |||||||||||||| |||| ||||| |||||||||| || |||| ||||| ||||||||||||||||||||    
T  31164681 ctcacttgcactcaattctggaagtactcgcgaggcaagggcatatgctcaccatggcgagtacaagccag 31164611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 18821627 - 18821575
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    ||||||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  18821627 gctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 18821575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 20803242 - 20803182
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  20803242 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcaacatgctctctg 20803182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 21939695 - 21939734
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  21939695 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 21939734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 25928588 - 25928635
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagc 94  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||    
T  25928588 gaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagc 25928635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 25603212 - 25603143
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcc 102  Q
    ||||||| ||||||||   |||| |||||||||||| |||||||||||||| |||| |||| ||||||||    
T  25603212 tgcactctgttctagactagctcacgaggcgagagcctctgctcgccatggtgagttcaagtcagaatcc 25603143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 25611550 - 25611481
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcc 102  Q
    ||||||| ||||||||   ||||||||||||||||| ||||||| ||||||||||| || | ||||||||    
T  25611550 tgcactctgttctagactagctcgcgaggcgagagcctctgctctccatggcgagttcaggtcagaatcc 25611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 29808695 - 29808638
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||| |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  29808695 aagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 29808638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 22408150 - 22408110
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgc 57  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  22408150 tcacaacattctcaattgcactcagttctggaagtgctcgc 22408110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 25766858 - 25766798
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||  ||||||||||||    
T  25766858 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaatttgacatgctctctg 25766798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 28496284 - 28496244
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  28496284 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 28496244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 20360767 - 20360716
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| || |||||||||||||||| || | ||||||||||    
T  20360767 ctcgcgaggcgagagcctcagctcgccatggcgagttcaggtcagaatccca 20360716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 31155205 - 31155166
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagtaca 91  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  31155205 gctcgcgaggcgagagcctctgctcgccatggagagtaca 31155166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 116
Target Start/End: Complemental strand, 2685121 - 2685087
Alignment:
Q  82 ggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||||||||||||||||||| ||||||    
T  2685121 ggcgagtacaagccagaatcccaactaaggttgtt 2685087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 22831932 - 22831974
Alignment:
Q  180 acactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||||||  |||||||||||| |||||||||||||||||||    
T  22831932 acactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 22831974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 25629161 - 25629123
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtaca 91  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  25629161 ctcgcgaggcgagagcctctgctcgccacggcgagtaca 25629123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 34369788 - 34369742
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 93  Q
    ||||||||||||||||||||| |  | ||||||||||||||||||||    
T  34369788 gaagtgctcgcgaggcgagagtacatactcgccatggcgagtacaag 34369742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 1561745 - 1561786
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  1561745 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 1561786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 1587421 - 1587384
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  1587421 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 1587384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 2685031 - 2684994
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  2685031 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 2684994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 12707104 - 12707141
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  12707104 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 12707141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 15894109 - 15894072
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  15894109 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 15894072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 16741623 - 16741660
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16741623 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16741660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 16920323 - 16920282
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  16920323 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 16920282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 21702703 - 21702740
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21702703 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21702740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 25611402 - 25611365
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  25611402 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 25611365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 4185630 - 4185594
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  4185630 gctcgcgaggcgagagcctctactcgccatggcgagt 4185594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 4668020 - 4667984
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  4668020 gctcgcgaggcgagagcctctactcgccatggcgagt 4667984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 22080544 - 22080508
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  22080544 gctcgcgaggcgagagcctctactcgccatggcgagt 22080508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 22334561 - 22334525
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaa 217  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  22334561 cactcaaaggcatctaaggttcaactcaaaagtcaaa 22334525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 13913 - 13696
Alignment:
Q  25 ttctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 124  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| |||    
T  13913 ttctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttggtctaagcta 13814  T
Q  125 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 224  Q
     |||||||||||||||  | ||||| ||||| ||||||||||||   ||||  || |||||||| || |||||||||| ||||||||||||||||||||     
T  13813 aaccaggttcaatctcactataagtcatcatctaatctttaataaatatctttaggcactcaaaaacctctaaggttcaactcaaaagtcaaaaatacaa 13714  T
Q  225 atttctacatgctctctg 242  Q
    | ||||||||||||||||    
T  13713 aattctacatgctctctg 13696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 48310 - 48103
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |      
T  48310 cacagatcgcaatattcttacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcctaacaatg 48211  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||   || ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||  ||||||    
T  48210 gttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaatatacatcttcagacactcaaaaacatctaaggttcatctcaaa 48111  T
Q  211 agtcaaaa 218  Q
    ||||||||    
T  48110 agtcaaaa 48103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 19582 - 19616
Alignment:
Q  54 tcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||| |||||||||||||||||||    
T  19582 tcgcgaggcgagagcctctgctcgccatggcgagt 19616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 18525 - 18740
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||| | |||| ||| ||| |    
T  18525 ctcacttgcactcagttctggaagcgctcgtgaggcgagagcatttgctcgccatggcgagtacaagccagattccaaactaatgatgttctaagctaaa 18624  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||  || |||||||| ||||||||||||| ||||||||||||||||||| |      
T  18625 ccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacggta 18724  T
Q  227 ttctacatgctctctg 242  Q
    ||||||||||||||||    
T  18725 ttctacatgctctctg 18740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 76998 - 76917
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||| || ||||||    
T  76998 cactcaattctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtacaagccagcttcccaacgaaggttgtt 76917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 209
Target Start/End: Original strand, 32719 - 32901
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||| |||||||||| |||||| ||| ||| |    
T  32719 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcaacatgtcgagtacaagccagattcccaactaatgttgttctaagctaaa 32818  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| ||||||    
T  32819 ccaggttcaatctcgttctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaa 32901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 8778 - 8839
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8778 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 8839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 7564 - 7789
Alignment:
Q  16 atcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgt 115  Q
    ||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  7564 atcactacattctcacttgcactcagttttggaagtgctcgcgaggcgagagcatttgctcgccacggcgagtccaagccagaatcccaactaaaattgt 7663  T
Q  116 tttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtca 215  Q
    |  || ||| |||||||||||||||  ||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||||||| ||||    
T  7664 tccaagctaaaccaggttcaatctcagtctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaggtca 7763  T
Q  216 aaaatacagatttctacatgctctct 241  Q
    |||||||||| ||| ||||| |||||    
T  7764 aaaatacagaattcaacatgttctct 7789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 15519 - 15298
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||||||| || |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||    
T  15519 cacagatcacaatatcctcacttgcactaagttctagaagtgatcgcgaggcgagagcatctgcttgccatggcgagtacaagccagattcccaacaaaa 15420  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    ||||||          | ||||||||||||||||||||||||||||||||||||||||  |||||  |  |||||||| ||||||||||||| |||||||    
T  15419 gttgtt----------ctaggttcaatctcgttctaagttatcatttaatctttaatagacatctttaagcactcaaaaacatctaaggttcaactcaaa 15330  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||| ||||||||||| ||||||||||||||||    
T  15329 agtaaaaaatacagaattctacatgctctctg 15298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 10553 - 10440
Alignment:
Q  129 aggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagattt 228  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| ||  |||||||| ||||||||||||| |||||||||||||||||||||| ||    
T  10553 aggttcaatctcgttctaagttttcatttaatctttaataggcatcttcaagcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacagaatt 10454  T
Q  229 ctacatgctctctg 242  Q
    ||||||||||||||    
T  10453 ctacatgctctctg 10440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 223
Target Start/End: Original strand, 20268 - 20464
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||  |||| ||||||| || |||||| ||   || |    
T  20268 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaactcagattcccaacaaaggttgttctaggttaaa 20367  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||    
T  20368 ccaggttcaatctcattctaagttatcatttaatctttaataggcatctccaggcactcaaaaacatctaaggttcaactcaaaagtcaaaactaca 20464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 16199 - 15968
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||  |||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||     
T  16199 cacagatcgcaacaacctcacttgcactcaattctggaagtgctcgcgaggcgagggcatctgctcgccatggcgagtacaagccagattccctaccaat 16100  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| ||| ||||||||||| ||||||  |||||||||||||||||||  |||||  || |||||||| ||||||||||||| |||||||    
T  16099 gttgttctaagctaaacctggttcaatctcattctaaactatcatttaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaa 16000  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||| ||||||||||| ||| ||||||||||||    
T  15999 agtaaaaaatacagaattcaacatgctctctg 15968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 124; Significance: 7e-64; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 14957 - 15171
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| |    
T  14957 ctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccatctaaagttgttctaagctaaa 15056  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    ||||||||||||||| ||||||||||||| | ||||||||||  |||||  || |||||||| ||||||||||||| |||||||||| ||||| | |||     
T  15057 ccaggttcaatctcg-tctaagttatcatcttatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtaaaaaaaatagaa 15155  T
Q  227 ttctacatgctctctg 242  Q
    ||| ||||||||||||    
T  15156 ttcaacatgctctctg 15171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 23972 - 24189
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||| ||| |    
T  23972 ctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagccagactcccaactaaagttgttctaagctaaa 24071  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata---ca 223  Q
    |||||||||||||||| |||||||||||| ||||||||||||  |||||  || |||||||| ||||||||||||  |||||||||| ||||| |   ||    
T  24072 ccaggttcaatctcgt-ctaagttatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggtttaactcaaaagtaaaaaaaaaaaca 24170  T
Q  224 gatttctacatgctctctg 242  Q
    || ||| ||||||||||||    
T  24171 gaattcaacatgctctctg 24189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 39396 - 39613
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||| ||| |    
T  39396 ctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagccagactcccaactaaagttgttctaagctaaa 39495  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata---ca 223  Q
    |||||||||||||||| |||||||||||| ||||||||||||  |||||  || |||||||| ||||||||||||  |||||||||| ||||| |   ||    
T  39496 ccaggttcaatctcgt-ctaagttatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggtttaactcaaaagtaaaaaaaaaaaca 39594  T
Q  224 gatttctacatgctctctg 242  Q
    || ||| ||||||||||||    
T  39595 gaattcaacatgctctctg 39613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 25 - 240
Target Start/End: Complemental strand, 23503 - 23288
Alignment:
Q  25 ttctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| |||    
T  23503 ttctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagaacaagccagattcccaactaaagttgttctaagcta 23404  T
Q  125 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 224  Q
     |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  ||  ||| ||| | ||||| ||||| ||||||||||||||| |||||    
T  23403 aaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggtactaaaaaatatctatggttcaactcaaaagtcaaaagtacag 23304  T
Q  225 atttctacatgctctc 240  Q
    | ||| ||||||||||    
T  23303 aattcaacatgctctc 23288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 38289 - 38119
Alignment:
Q  72 tgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgc 171  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| || | ||||||||||  ||||||| ||||| ||||||||||||  |    
T  38289 tgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaactatgttcaatctcactctaagtcatcatgtaatctttaataaac 38190  T
Q  172 atctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||  ||  ||||||| |||| || ||||| ||||||||||||||| |||||| ||| ||||||| ||||    
T  38189 atctttaggtactcaaaaacatatatggttcaactcaaaagtcaaaagtacagaattcaacatgctttctg 38119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 660 - 889
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| |||    
T  660 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagatttccaactcaag 759  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| ||||||| |||||||||||||||||||||| | ||||| ||||||||||||  ||||   ||  |||||||  |||||||||||| ||||||||    
T  760 ttgttctaaactaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcattaggtactcaaaagcatctaaggttcaactcaaaa 859  T
Q  212 gtcaaaaatacagatttctacatgctctct 241  Q
    ||||||| |||||| ||| |||||||||||    
T  860 gtcaaaattacagaattcaacatgctctct 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 65640 - 65412
Alignment:
Q  14 agatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagtt 113  Q
    ||||| ||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| || |||    
T  65640 agatcgcaatatcctcacttgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgagtacaagccagatccccaacaaaggtt 65541  T
Q  114 gttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagt 213  Q
    ||| ||   || |||||||||||||| ||||||||||||||||||||||||||||   |||| ||| |||||||| ||||||||||||| ||||||||||    
T  65540 gttctaggttaaaccaggttcaatcttgttctaagttatcatttaatctttaataaatatcttcaggcactcaaaaacatctaaggttcaactcaaaagt 65441  T
Q  214 caaaaatacagatttctacatgctctctg 242  Q
    ||||| |||| | |  |||||||||||||    
T  65440 caaaactacaaaatcttacatgctctctg 65412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 53842 - 54041
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  53842 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 53931  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  53932 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcaac 54031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 18287 - 18072
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| || ||| ||| |    
T  18287 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactagccagattcccaactaatgttattctaagctaaa 18188  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    ||||||||||| || ||||||||||||||| |||  ||||||  |||||  || |||||||| ||||||||||||| |||| |||||||||| || |||     
T  18187 ccaggttcaatttcattctaagttatcattaaattattaataaacatctttaggcactcaaaaacatctaaggttcaactctaaagtcaaaattatagaa 18088  T
Q  227 ttctacatgctctctg 242  Q
    ||||||||||||||||    
T  18087 ttctacatgctctctg 18072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 5872 - 6081
Alignment:
Q  32 ttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 131  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  || ||| ||||||    
T  5872 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttcgaagctaaaccagg 5971  T
Q  132 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttcta 231  Q
    |||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||| ||||| ||| |    
T  5972 ttcaatcttgttctaagtcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaacacagaattcga 6071  T
Q  232 catgctctct 241  Q
    ||||||||||    
T  6072 catgctctct 6081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 7067 - 7276
Alignment:
Q  32 ttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 131  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  || ||| ||||||    
T  7067 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattacaactaaagttgttcaaagctaaaccagg 7166  T
Q  132 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttcta 231  Q
    |||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||| ||||| ||| |    
T  7167 ttcaatcttgttctaagtcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaacacagaattcga 7266  T
Q  232 catgctctct 241  Q
    ||||||||||    
T  7267 catgctctct 7276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 242
Target Start/End: Original strand, 445 - 657
Alignment:
Q  30 acttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 129  Q
    ||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||    
T  445 acttgcactcagttctagaagtgcttgcgaggagagagcatctactcgccatggcgagtacaagccagaattccaactaaagttgttctaagctaaacca 544  T
Q  130 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 229  Q
    |||||||||||||||||||| ||| | ||| | ||||||  |||||  |  ||||||||  |||||| ||||| |||||||||||||||||||||| |||    
T  545 ggttcaatctcgttctaagtcatcgtctaaccattaataaacatctttatgcactcaaaagcatctagggttcaactcaaaagtcaaaaatacagaattc 644  T
Q  230 tacatgctctctg 242  Q
     ||||||||||||    
T  645 aacatgctctctg 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 1609 - 1845
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||     
T  1609 cacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagccagactcccaacaaag 1708  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||   |  |||||||||||| || |||||||||||| ||||||||||||||  ||||| ||| |||||||| ||||||||||||| |||||||    
T  1709 gttgttctaggtttaaccaggttcaatgtctttctaagttatcctttaatctttaataaacatcttcaggcactcaaaaacatctaaggttcaactcaaa 1808  T
Q  211 agtcaaaaatacagatttctacatgctctctgctcct 247  Q
    |||||||| |||  | |  ||||||||||||| ||||    
T  1809 agtcaaaattacgaaatcttacatgctctctggtcct 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 15973 - 16009
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  15973 gctcgcgaggcgagagcctctgctcgccatggcgagt 16009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 1162 - 1393
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| || | ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| ||    
T  1162 cacagatcgcaacatcctaatttgcattcagttctagaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagatttccaactcaa 1261  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| | ||||||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||    
T  1262 gttgttctaagctaaatcaggttcaatctcattctaaatcatcatctaatctttaatagacatcttaaggcactcaaaagcatctaaggttcaactcaaa 1361  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| || ||| ||| ||||||||||||    
T  1362 agtcaaaattatagaattcgacatgctctctg 1393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 242
Target Start/End: Complemental strand, 16959 - 16740
Alignment:
Q  23 cattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaac 122  Q
    ||||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||| ||| |    
T  16959 cattctcaaatgcactcggttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacatgccagattcccaactaaggttgttctaagc 16860  T
Q  123 tataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    || |||| ||||||||| ||||||||| ||||| |||| |||||||  |||||  || ||||||||  |||||||| ||| |||||||||||||||| ||    
T  16859 taaaccaagttcaatcttgttctaagtcatcatctaatatttaataaacatcttaaggcactcaaaagcatctaagcttcaactcaaaagtcaaaaacac 16760  T
Q  223 agatttctacatgctctctg 242  Q
    ||| ||||||||||||||||    
T  16759 agaattctacatgctctctg 16740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 46577 - 46346
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaa 110  Q
    |||||||| |||||| || |||||||||||||||| ||||||||||||||| |||||||| || || ||||||||||||||||||||| ||| |||||||    
T  46577 cacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcgaggagagagcatttggtcaccatggcgagtacaagccagattcctaactaaa 46478  T
Q  111 gttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaa 210  Q
    |||||| ||| ||| |||| ||||||||||  ||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||    
T  46477 gttgttctaagctaaaccaagttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaa 46378  T
Q  211 agtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||| | ||| ||||||||||||    
T  46377 agtcaaaaatacataattcaacatgctctctg 46346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 27 - 218
Target Start/End: Original strand, 175052 - 175243
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    |||||||| |||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||| || |||||| ||   || |    
T  175052 ctcacttggactcggttctggaagtgctcgcgaggtgagagcatctgctcgcaatggcgagtacaagccagattcccaacaaaggttgttctaggttaaa 175151  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  175152 ccaggttcaatctcattctaagttatcatttaatctctaataggcatctccaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 175243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 124899 - 124950
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  124899 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 124950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 6150 - 5952
Alignment:
Q  20 caacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtttta 119  Q
    |||||| |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||    
T  6150 caacatcctcacttgcattcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttcta 6051  T
Q  120 aactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    | ||  |||||||||||||||  |||||||  |||| ||||||||||||||||||| ||| |||||||| ||||||||||||| ||||| | |||||||    
T  6050 agcttaaccaggttcaatctcaatctaagtcttcatctaatctttaatatgcatcttcaggcactcaaaaacatctaaggttcaactcacaggtcaaaa 5952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 6247 - 6038
Alignment:
Q  30 acttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 129  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||| ||| ||||    
T  6247 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaacca 6148  T
Q  130 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 229  Q
     |||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  6147 agttcaatctcattctaaatcatcatctaatctttaataaacatctgaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaagtacagaattc 6048  T
Q  230 tacatgctct 239  Q
     |||||||||    
T  6047 aacatgctct 6038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 26706 - 26877
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttcta 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||| ||   || ||||||||||||||| |||||    
T  26706 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattcta 26805  T
Q  147 agttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||    
T  26806 agttatcatttaatctttaataagcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 26877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 1037 - 867
Alignment:
Q  72 tgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgc 171  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||| ||| ||| || |||||||||||| ||||||||||||||||||||||||||| ||    
T  1037 tgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaactaggttcaatctcattctaagttatcatttaatctttaataggc 938  T
Q  172 atctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||| ||| |||||||| ||||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  937 atcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacataattctacatgctctctg 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 1077 - 1031
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgc 57  Q
    |||||||| ||| || ||||||||||||||||||| |||||||||||    
T  1077 cacagatcgcaatatcctcacttgcactcagttctggaagtgctcgc 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 21418 - 21188
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |    
T  21418 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaattccaactaagg 21319  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||| | ||| ||| ||||||||||||||| | |||  ||||||||||||| ||||||  |||||  ||  ||| ||| ||||||||||||| ||||||||    
T  21318 ttgctctaagctaaaccaggttcaatctcatcctacattatcatttaatccttaatacacatcttaaggtactaaaaaacatctaaggttcaactcaaaa 21219  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    || ||||||| ||| ||| ||||||||||||    
T  21218 gtaaaaaatatagaattcgacatgctctctg 21188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 80139 - 80102
Alignment:
Q  51 tgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  80139 tgctcgcgaggcgagagcctctgctcgccatgtcgagt 80102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 106; Significance: 4e-53; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 30589 - 30364
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||  |||||||    
T  30589 tcacaacattctcaaatgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtataagccagatttccaactccagttgtt 30490  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
     ||| ||| |||||||||||||||||||||| | ||||| ||||||||| ||   ||||  || ||||||||  |||||||||||| |||||||||||||    
T  30489 ctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttattaaagatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaa 30390  T
Q  217 aaatacagatttctacatgctctctg 242  Q
    || |||  | ||| ||||||||||||    
T  30389 aattacgaaattcaacatgctctctg 30364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 2157 - 2216
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2157 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 2216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 2292 - 2329
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  2292 actcaaagacatctaaggttcaactcaaaagtcaaaaa 2329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 101; Significance: 4e-50; HSPs: 4)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 4011 - 4167
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||| |    
T  4011 acagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatggcgagtacaagctagattcccaactaatg 4110  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaata 168  Q
    ||||| ||| ||| ||||||||||||||| ||||||| |||||||||||| ||||||    
T  4111 ttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcattaata 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 8442 - 8598
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||| |    
T  8442 acagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatggcgagtacaagctagattcccaactaatg 8541  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaata 168  Q
    ||||| ||| ||| ||||||||||||||| ||||||| |||||||||||| ||||||    
T  8542 ttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcattaata 8598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 4181 - 4219
Alignment:
Q  204 actcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  4181 actcaaaagtcaaaagtacagaattctacatgctctctg 4219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 8612 - 8650
Alignment:
Q  204 actcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  8612 actcaaaagtcaaaagtacagaattctacatgctctctg 8650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 4767 - 4552
Alignment:
Q  27 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 126  Q
    |||| |||||||| ||| | ||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||| ||| ||| |    
T  4767 ctcaattgcactcggttttggaaatgctcgcgaggcgagagcatcttctcaccatgacgagtacaagccagaattccaactaaagttgttctaagctaaa 4668  T
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 226  Q
    || |||||||||||  ||||||| ||||| ||||||||||||  |||||  || || ||||| | ||||||||||| ||||||||||||||||||||||     
T  4667 cccggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcattcaaaaatatctaaggttcaactcaaaagtcaaaaatacagaa 4568  T
Q  227 ttctacatgctctctg 242  Q
    ||| |||||| |||||    
T  4567 ttcaacatgcgctctg 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 94; Significance: 6e-46; HSPs: 5)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 191102 - 190917
Alignment:
Q  40 agttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatct 139  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||| ||   || ||||||||||||||    
T  191102 agttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaattttgttctaggttaaaccaggttcaatct 191003  T
Q  140 cgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacaga 225  Q
    | |||||||||||||||||||| ||  ||  |||||  || |||||||| ||||||||||||  |||||||||||||||| |||||    
T  191002 cattctaagttatcatttaatcatttctaaacatctttaggcactcaaaaacatctaaggttgaactcaaaagtcaaaaacacaga 190917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 192812 - 192620
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    |||||| || ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||| ||   || |||||||    
T  192812 tgcacttagatctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaagtttgttctaggttaaaccaggt 192713  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacaga 225  Q
    ||||||||  ||||||||||||||||||| ||  ||  |||||  || |||||||| ||||||||||||  |||||||||||||||| |||||    
T  192712 tcaatctcaatctaagttatcatttaatcatttctaaacatctttaggcactcaaaaacatctaaggttgaactcaaaagtcaaaaacacaga 192620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 56376 - 56457
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  56376 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 56457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 15056 - 14963
Alignment:
Q  129 aggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||||||||||||||||||  |  | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  15056 aggttcaatctcgttctaagtctttctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 14963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 19578 - 19485
Alignment:
Q  129 aggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||||||||||||||||||  |  | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  19578 aggttcaatctcgttctaagtctttctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 19485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 32 - 242
Target Start/End: Original strand, 566 - 766
Alignment:
Q  32 ttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 131  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |  ||| ||          |||||    
T  566 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacaatggttatt----------ccagg 655  T
Q  132 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttcta 231  Q
    |||||||| ||||||||| ||||| ||||||||| ||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||||||||| |    
T  656 ttcaatcttgttctaagtcatcatctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagatttcaa 755  T
Q  232 catgctctctg 242  Q
    |||||||||||    
T  756 catgctctctg 766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 15362 - 15490
Alignment:
Q  21 aacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaa 120  Q
    ||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  15362 aacattctcaaatgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatttcaactaaagttgttctaa 15461  T
Q  121 actataccaggttcaatctcgttctaagt 149  Q
     ||| |||||||||||||| |||||||||    
T  15462 gctaaaccaggttcaatcttgttctaagt 15490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 2096 - 2325
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| |  ||||| | |||||| | |||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||| |||    
T  2096 acagatcgcaacatcccaacttgtattcagttatggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaag 2195  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| |||  || |||||||||||||||||| ||| | ||||| ||||||||| ||  |||||  || |||| |||  |||||||||||| ||||||||    
T  2196 ttgttctaagataaaccaggttcaatctcgttttaaatcatcatctaatctttattaaacatcttaaggcacttaaaagcatctaaggttcaactcaaaa 2295  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||| || ||||||| ||| ||||| ||||||    
T  2296 gtc-aacatacagaattcaacatgttctctg 2325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 9778 - 10007
Alignment:
Q  12 acagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 111  Q
    ||||||| |||||| |  ||||| | |||||| | |||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||| |||    
T  9778 acagatcgcaacatcccaacttgtattcagttatggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaag 9877  T
Q  112 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 211  Q
    ||||| |||  || |||||||||||||||||| ||| | ||||| ||||||||| ||  |||||  || |||| |||  |||||||||||| ||||||||    
T  9878 ttgttctaagataaaccaggttcaatctcgttttaaatcatcatctaatctttattaaacatcttaaggcacttaaaagcatctaaggttcaactcaaaa 9977  T
Q  212 gtcaaaaatacagatttctacatgctctctg 242  Q
    ||| || ||||||| ||| ||||| ||||||    
T  9978 gtc-aacatacagaattcaacatgttctctg 10007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 178974 - 179128
Alignment:
Q  64 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctt 163  Q
    |||||||||||| |||||||||||||||||||||| ||||||| |  |||||| |||  || ||||||||||||||  ||||||||||||||||||||||    
T  178974 agagcatctgctagccatggcgagtacaagccagattcccaacaatggttgttctaagttaaaccaggttcaatcttattctaagttatcatttaatctt 179073  T
Q  164 taatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||| |||||| ||| |||| ||| ||||||||||| | |||||||||||||||    
T  179074 taataagcatcttcaggcactgaaaaacatctaaggtccaactcaaaagtcaaaa 179128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 242
Target Start/End: Complemental strand, 1328 - 1119
Alignment:
Q  23 cattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaac 122  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  ||              
T  1328 cattctcacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagaattccaacaatggt---------- 1239  T
Q  123 tataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||| ||| ||||||||| ||||||||| | ||| ||||||||||||  |||||  || ||||||||  ||||||| |||| ||||| ||||||||| |||    
T  1238 tattccaagttcaatcttgttctaagtcaacatctaatctttaataaacatctaaaggcactcaaaagcatctaaagttcaactcacaagtcaaaactac 1139  T
Q  223 agatttctacatgctctctg 242  Q
    ||| ||| ||||||||||||    
T  1138 agaattcgacatgctctctg 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 79; Significance: 5e-37; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 18461 - 18262
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||          | ||||    
T  18461 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaataaggttgtt----------ctaggt 18372  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||  | ||||||||||||  || ||  || |||||||| ||||||||||||| ||||||||||||||||  |||| ||  ||    
T  18371 tcaatcttgttctaaatcattctctaatctttaatagacacctaaaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaactcagaatttgac 18272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 4822 - 4874
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    ||||||| |||||||| ||||||||||||||||||| || | |||| ||||||    
T  4822 ctcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 12404 - 12456
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    ||||||| |||||||| ||||||||||||||||||| || | |||| ||||||    
T  12404 ctcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 12456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 22356 - 22408
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    ||||||| |||||||| ||||||||||||||||||| || | |||| ||||||    
T  22356 ctcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 22408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 79; Significance: 5e-37; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 19465 - 19664
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  19465 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 19554  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||  | ||||||||| ||  || ||  ||  ||||||||  ||||||||||| ||||||||||||||||  |||| ||| ||    
T  19555 tcaatcttgttctaaatcattctctaatctttagtagacacctaaaggtactcaaaggtatctaaggttcaactcaaaagtcaaaaactcagaattcgac 19654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 13181 - 13264
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  13181 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 13264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 62541 - 62600
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  62541 ctcaattctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 62600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 66244 - 66045
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  66244 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 66155  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    ||||||| ||||||| | ||| | |||||| || ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||   ||| ||| ||    
T  66154 tcaatcttgttctaaatcatcctctaatctatattagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaacttagaattcgac 66055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 242
Target Start/End: Complemental strand, 71343 - 71186
Alignment:
Q  75 tcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatc 174  Q
    |||||||||||||||||||||||| |||||||||| ||||||          ||||||||||||| ||||||| | ||| | |||||| || ||  || |    
T  71343 tcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttcaatcttgttctaaatcatcctctaatctatattagacacc 71254  T
Q  175 tccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |  ||  |||||||| |||||||||||| ||||||||||||||||   ||| ||| ||||||||||||    
T  71253 taaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaacttagaattcgacatgctctctg 71186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 218
Target Start/End: Complemental strand, 19136 - 18945
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||||||||  ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |  ||        
T  19136 tcacgacattctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagaattccaacaatggt---- 19041  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
          ||| ||||||||||||| ||||||||| ||||| ||||||||| |   |||||  || ||||||||  |||||||||||| |||||||||||||    
T  19040 ------tattccaggttcaatcttgttctaagtcatcatctaatctttagtgaacatctaaaggcactcaaaagcatctaaggttcaactcaaaagtcaa 18947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 10181 - 10356
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          |||||||    
T  10181 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt----------ccaggtt 10270  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  10271 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 10356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 242
Target Start/End: Original strand, 173567 - 173766
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  173567 tgcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 173656  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 232  Q
    |||||||| || ||| | ||| | ||||| ||| ||  || ||  ||  ||||||||||||||||||||| ||| ||||||||||||  |||| ||| ||    
T  173657 tcaatctcattataaatcatcctctaatcattagtagacacctaaaggtactcaaagacatctaaggttcaactaaaaagtcaaaaactcagaattcgac 173756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 422359 - 422285
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 108  Q
    |||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||  |||||| | |||||||    
T  422359 gcactctgttctggaagtgctcgcgagctgagagcatctgctcgccatggcgagtacttgccagatttccaacta 422285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 242
Target Start/End: Complemental strand, 35338 - 35140
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||| ||||||          |||||||    
T  35338 gcactcagttctggaagtgctcgcgaggcgagagcatctcctcgccatggcgagtacaagccaggtttccaactaaggttgtt----------ccaggtt 35249  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 233  Q
    |||||| ||||||| | ||| | ||||||||| ||| |||||  ||  |||||||  |||||||||||| ||||||||||||||| |||| | ||| |||    
T  35248 caatcttgttctaaatcatcctctaatctttattatacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaattcgaca 35149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 74; Significance: 5e-34; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 242
Target Start/End: Complemental strand, 19845 - 19647
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||          |||||||    
T  19845 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgtt----------ccaggtt 19756  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 233  Q
    |||||| ||||||| | ||  | ||||||||| ||  || ||  |   |||||||| |||||||||||| ||||||||||||||||  |||| ||| |||    
T  19755 caatcttgttctaaatcattctctaatctttagtagacacctaaatgtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgaca 19656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 32642 - 32601
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  32642 cagacactcaaaagcatctaaggttcgactcaaaagtcaaaa 32601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 46363 - 46404
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  46363 cagacactcaaaagcatctaaggttcgactcaaaagtcaaaa 46404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 44391 - 44550
Alignment:
Q  83 gcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagaca 182  Q
    |||||||||||||||||| ||| || |||||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||   ||||  || ||    
T  44391 gcgagtacaagccagaattccagcttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaatatcttaaggca 44490  T
Q  183 ctcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||  |||||||||||| ||||||||||||||| |||| | ||| ||||||||||||    
T  44491 ctcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaattcaacatgctctctg 44550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 228202 - 228119
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  228202 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 228119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 72; Significance: 7e-33; HSPs: 5)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 96883 - 96966
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  96883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 96966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 71590 - 71765
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  71590 tgcactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 71679  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||| ||||||| | ||| | |||| | || ||  || ||  ||  ||||||||||||||||||||| |||||||||||||||    
T  71680 tcaatcttgttctaattaatcctctaatatctagtagacacctaaaggtactcaaagacatctaaggttcaactcaaaagtcaaaa 71765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 139988 - 140163
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| ||          ||||    
T  139988 gcactcagttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgttcta----------ggtt 140077  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  140078 caatctcgttctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 140163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 413891 - 413803
Alignment:
Q  21 aacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    |||||||||| || || |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||    
T  413891 aacattctcaattacattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaa 413803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 339757 - 339705
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||||||||||| |||||||||| |||||||| || | |||| ||||||    
T  339757 ctcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaa 339705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 207 - 289
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  207 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 345 - 382
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  345 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 592 - 807
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||| ||    
T  592 tcacgacattctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttatt 691  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
    |          |||||||||||| ||||||||| ||| | ||||||||| |   |||||  ||  |||||||  |||||||||||| ||||||||||| |    
T  692 t----------caggttcaatcttgttctaagtcatcctctaatctttagtgaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcca 781  T
Q  217 aaatacagatttctacatgctctctg 242  Q
    || |||  | ||| ||||||||||||    
T  782 aattacgaaattcaacatgctctctg 807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 36583 - 36665
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  36583 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaggttgtt 36665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 36721 - 36757
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||| |||||||||||| |||||||||||||||    
T  36721 actcaaaggcatctaaggttcaactcaaaagtcaaaa 36757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 71; Significance: 3e-32; HSPs: 6)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 45379 - 45594
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||| ||    
T  45379 tcacgacattctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttatt 45478  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
    |          |||||||||||| ||||||||| ||| | ||||||||| |   |||||  ||  |||||||  |||||||||||| ||||||||||| |    
T  45479 t----------caggttcaatcttgttctaagtcatcctctaatctttagtgaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcca 45568  T
Q  217 aaatacagatttctacatgctctctg 242  Q
    || |||  | ||| ||||||||||||    
T  45569 aattacgaaattcaacatgctctctg 45594  T

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Target: scaffold0109; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 7222 - 7296
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 108  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||| ||| |||||||    
T  7222 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccaaagcgagtacaagccaaaattccaacta 7296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 38646 - 38564
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 117  Q
    |||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||   | |||||||| |||||||    
T  38646 cactcaattcttgaagtgctcacgaggcgagaggatctgctcgccatggcgagtacaagccaactttccaactaaggttgttt 38564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 11117 - 11068
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11117 gaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagcca 11068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 10992 - 10955
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  10992 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 10955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 38509 - 38472
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  38509 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 38472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 15247 - 15072
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 132  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||          ||||||    
T  15247 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgtt----------ccaggt 15158  T
Q  133 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| |||||||||| ||||    
T  15157 tcaatcttgttctaattcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtgaaaa 15072  T

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Target: scaffold0193 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 9701 - 9780
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9701 ctcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 9780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 9836 - 9873
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  9836 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 9873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 2502 - 2419
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  2502 tgcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 2419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 9631 - 9680
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| ||||    
T  9631 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaggcca 9680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 2353 - 2304
Alignment:
Q  192 atctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 241  Q
    ||||||||||| ||||||||||||||||  |||| ||| |||||||||||    
T  2353 atctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctct 2304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 24796 - 24714
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  24796 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 24714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 2068 - 2144
Alignment:
Q  22 acattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 98  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2068 acattctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 2144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 2165 - 2277
Alignment:
Q  130 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 229  Q
    |||||||||| ||||||||| ||| | |||||||||||   |||||  ||  |||||||  |||||||||||| ||||||||||| ||| |||  | |||    
T  2165 ggttcaatcttgttctaagtcatcctctaatctttaatgaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaattacgaaattc 2264  T
Q  230 tacatgctctctg 242  Q
     ||||||||||||    
T  2265 aacatgctctctg 2277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 13316 - 13240
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13316 tgcactcagttctggaagtgctcgcgaggagagagcatctgctcgccatggcgagtacaagccagattcccaactaa 13240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 3359 - 3283
Alignment:
Q  33 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 109  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  3359 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactaa 3283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 64398 - 64282
Alignment:
Q  126 accaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacaga 225  Q
    ||||||||||||||| ||||| |||||||||||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||| |    
T  64398 accaggttcaatctcattctatgttatcatttaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacata 64299  T
Q  226 tttctacatgctctctg 242  Q
     ||| ||||||||||||    
T  64298 attcaacatgctctctg 64282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 47413 - 47458
Alignment:
Q  177 cagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||||||  |||||||||||| ||||||||||||| |||||    
T  47413 cagacactcaaaagcatctaaggttcaactcaaaagtcaacaatac 47458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 11658 - 11740
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  11658 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatccccaactaaggttgtt 11740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 5828 - 5746
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||||    
T  5828 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccggaattccaactaaggttgtt 5746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 23494 - 23576
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  23494 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgtt 23576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 242348 - 242417
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  242348 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 130221 - 130257
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  130221 gctcgcgaggcgagagcctctgctcgccatggcgagt 130257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 23632 - 23669
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  23632 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 23669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 9613 - 9694
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  9613 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgtt 9694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 635 - 713
Alignment:
Q  38 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || ||||||    
T  635 tcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaacaaaggttgtt 713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 2263 - 2084
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||  ||||||          |||||||    
T  2263 gcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactacggttgtt----------ccaggtt 2174  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    |||||| || |||||| ||| | ||||||||||||  || ||  ||  |||||||  |||||||||||| || |||||||||||| ||||    
T  2173 caatcttgtactaagtcatcctctaatctttaatacacaactaaaggtactcaaaagcatctaaggttcaacgcaaaagtcaaaattaca 2084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 10123 - 10061
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10123 gcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 10061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 10040 - 9944
Alignment:
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 223  Q
    ||||||||||||| || |||||| ||| | ||||||||||||  || ||  ||  |||||||  |||||||||||| || |||||||||||| ||||    
T  10040 ccaggttcaatcttgtactaagtcatcctctaatctttaatacacaactaaaggtactcaaaagcatctaaggttcaacgcaaaagtcaaaattaca 9944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 4052 - 3874
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||  ||||||          |||||||    
T  4052 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccaggtttccaactacggttgtt----------ccaggtt 3963  T
Q  134 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  ||||||| |||| ||||||||||| |||||||    
T  3962 caatcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaagttcaactcaaaagtccaaaatac 3874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 242
Target Start/End: Original strand, 18633 - 18830
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 134  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| | |||||| ||||||||| |||||||||| ||||||          ||||||||    
T  18633 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccttagcgagttcaagccagattcccaactaaggttgtt----------ccaggttc 18722  T
Q  135 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 234  Q
    |||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  || | ||| ||||    
T  18723 aatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcataattcgacat 18822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 58545 - 58484
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  58545 cactcaattctagaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 58484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 132963 - 133003
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  132963 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 133003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 36105 - 36034
Alignment:
Q  147 agttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    |||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||    
T  36105 agttatcatttaatctttaataagcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 36034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 8849 - 8931
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||  |||||| | |||||||| ||||||    
T  8849 gcactcagttctggaaatgctcgcgaggcgagagcatctcctcgccatggcgagtacttgccagatttccaactaaggttgtt 8931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 851 - 945
Alignment:
Q  11 cacagatcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||| ||| || |||| || ||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| || | |||||||||||    
T  851 cacagatcgcaatatcctcatttacactcagttctggaagtgctcacgaggcgagaacatctgctcgccatggcgagttcagggcagaatcccaa 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 1021 - 1062
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  1021 cactcaaagacatctaaggttcaactcaaaagtcaaaaatac 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 6085 - 6011
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 108  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||| ||| |||||||    
T  6085 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccaaagcgagtacaagccaaaattccaacta 6011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 2190 - 2239
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2190 gaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagcca 2239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 2315 - 2352
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  2315 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 2352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 192161 - 191966
Alignment:
Q  17 tcacaacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| |||||||||   ||||||| |||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| ||||     ||||||    
T  192161 tcacgacattctcaaaagcactcaattctggaagtgctcacgaggcgagagcatcagctcgccacggcgagtacaagccagaattccaatactggttgtt 192062  T
Q  117 ttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaa 216  Q
              ||||||||||||| ||||||||| ||  | ||||||||||||  |||||  ||  |||| || ||||||||||||| ||||||||||| |    
T  192061 ----------ccaggttcaatcttgttctaagtcattctctaatctttaatacacatctaaaggtactcgaaaacatctaaggttcaactcaaaagtcca 191972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 4928 - 4867
Alignment:
Q  35 cactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4928 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 4867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 15618 - 15698
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 117  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||   | |||||||| |||||||    
T  15618 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccattgcgagtacaagccaactttccaactaaggttgttt 15698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 15759 - 15796
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15759 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 7098 - 7042
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 90  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  7098 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtac 7042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 18180 - 18106
Alignment:
Q  42 ttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 116  Q
    |||| ||||||||||||||| ||||||||| ||||||||| |||||||||||||||| ||| |||||| ||||||    
T  18180 ttctggaagtgctcgcgaggtgagagcatcagctcgccatagcgagtacaagccagattcctaactaaggttgtt 18106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 18050 - 18013
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18050 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 1345 - 1406
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  1345 cactcaaaggcatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctctg 1406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 3912 - 3973
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  3912 cactcaaagtcatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctctg 3973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 7976 - 8037
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  7976 cactcaaagtcatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctctg 8037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 3795 - 3846
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||| ||||||| ||||||||||||||||||| || | ||||||||||    
T  3795 ctcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatccca 3846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 7859 - 7910
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||| ||||||| ||||||||||||||||||| || | ||||||||||    
T  7859 ctcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatccca 7910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 16488 - 16429
Alignment:
Q  37 ctcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  16488 ctcaattctggaagtgcttgcgaggcgagtgcatctgctcgccatggcgagtacaagcca 16429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 30022 - 29973
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  30022 gaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcca 29973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 10468 - 10517
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  10468 gaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagcca 10517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 14355 - 14306
Alignment:
Q  47 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  14355 gaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagcca 14306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 10221 - 10261
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10221 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 10261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 10352 - 10389
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  10352 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 10389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 24461 - 24421
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  24461 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 24421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1048 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 1798 - 1893
Alignment:
Q  127 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||||||| ||||||| |  || | ||||||||||||  |||||  ||  ||||||| ||||||||||||| ||||||||||| |||||||    
T  1798 ccaggttcaatcttgttctaaatcctcctctaatctttaataaacatctaaaggtactcaaaaacatctaaggttcaactcaaaagtccaaaatac 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 340 - 379
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  340 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 8103 - 8064
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  8103 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 8064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 7973 - 7936
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaa 218  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  7973 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 7936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 207328 - 207289
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  207328 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 207198 - 207160
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  207198 cactcaaaggcatctaaggttcaactcaaaagtcaaaaa 207160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 4821 - 4780
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  4821 cactcaaaggcatctaaggttcaactcaaaagtcaaaaatac 4780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 2383 - 2424
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  2383 cactcaaaggcatctaaggttcaactcaaaagtcaaaaatac 2424  T

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Target: scaffold0256 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 24794 - 24741
Alignment:
Q  43 tctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 96  Q
    ||||||||||| ||||||||||||| | || ||| |||||||||||||||||||    
T  24794 tctagaagtgcccgcgaggcgagagtacctactcaccatggcgagtacaagcca 24741  T

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Target: scaffold0405 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 9382 - 9322
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||| |||||||||||| ||||||||||||||||  || | ||| ||||||||||||    
T  9382 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcaaaattcgacatgctctctg 9322  T

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Target: scaffold0358 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 253 - 301
Alignment:
Q  56 gcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    ||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  253 gcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 5029 - 5077
Alignment:
Q  56 gcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    ||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  5029 gcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 5077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 7041 - 7081
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaata 221  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  7041 cactcaaaggcatctaaggttcaactcaaaagtcaaaaata 7081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 20716 - 20768
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    ||||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  20716 gctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 20768  T

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Target: scaffold0211 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 28620 - 28580
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  28620 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 28580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 2251 - 2215
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2251 gctcgcgaggcgagagcctctgctcgccatggcgagt 2215  T

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Target: scaffold0142 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 7581 - 7541
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  7581 aagtgctcgcgaggcgagagcctctgcttgccatggcgagt 7541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 17095 - 17130
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||| |||||||||||||||||||    
T  17095 ctcgcgaggcgagagcctctgctcgccatggcgagt 17130  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 59309 - 59273
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  59309 gctcgcgaggcgagagcctctgctcgccatggcgagt 59273  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 40173 - 40209
Alignment:
Q  55 cgcgaggcgagagcatctgctcgccatggcgagtaca 91  Q
    |||||||||||||| |||||||||| |||||||||||    
T  40173 cgcgaggcgagagcctctgctcgccgtggcgagtaca 40209  T

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Target: scaffold1984 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 445 - 480
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||| |||||||||||||||||||    
T  445 ctcgcgaggcgagagcctctgctcgccatggcgagt 480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 856 - 805
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  856 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 11481 - 11430
Alignment:
Q  191 catctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 242  Q
    |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  11481 catctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 11430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 3784 - 3835
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  3784 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 3835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 12618 - 12579
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  12618 agtgcttgcgaggcgagagcctctgctcgccatggcgagt 12579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 16406 - 16371
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||| |||||||||||||||||||    
T  16406 ctcgcgaggcgagagcctctgctcgccatggcgagt 16371  T

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Target: scaffold0175 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 13406 - 13457
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  13406 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 13457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 34437 - 34471
Alignment:
Q  54 tcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||| |||||||||||||||||||    
T  34437 tcgcgaggcgagagcctctgctcgccatggcgagt 34471  T

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Target: scaffold0175; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 34562 - 34603
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  34562 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 34603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 9643 - 9604
Alignment:
Q  49 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  9643 agtgctcgcgaggcgagagcctctgctcgccatgacgagt 9604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 32378 - 32429
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||| ||| |||| ||||||||||    
T  32378 ctcgcgaggcgagagcctctgctcgccgtggcaagttcaagtcagaatccca 32429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 32495 - 32536
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  32495 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 32536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 52226 - 52277
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  52226 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 52277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 167786 - 167735
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 104  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  167786 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 167735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 1883 - 1850
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcga 86  Q
    |||||||||||||||| |||||||||||||||||    
T  1883 ctcgcgaggcgagagcctctgctcgccatggcga 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 6432 - 6489
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctct 239  Q
    |||||||| | |||||||||| ||||||||||||||||  |||| ||| |||||||||    
T  6432 actcaaaggcgtctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctct 6489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 742 - 701
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  742 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 13926 - 13967
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  13926 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 13967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 13808 - 13844
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  13808 gctcgcgaggcgagagcctctgctcgccgtggcgagt 13844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 10951 - 10910
Alignment:
Q  181 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  10951 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 10910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 12169 - 12206
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaa 219  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  12169 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 12206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 39075 - 39124
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcc 102  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||    
T  39075 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcc 39124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 1979 - 1939
Alignment:
Q  182 actcaaagacatctaaggttctactcaaaagtcaaaaatac 222  Q
    ||||||| |||||||||| || |||||||||||||||||||    
T  1979 actcaaaaacatctaaggatcaactcaaaagtcaaaaatac 1939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 2112 - 2072
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| |||||| ||||||||||||    
T  2112 aagtactcgcgaggcgagagcctctgcttgccatggcgagt 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 2613 - 2573
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| |||||||||||||||| ||| |||||||||||||||    
T  2613 aagtactcgcgaggcgagagcctctactcgccatggcgagt 2573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 9390 - 9426
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  9390 gctcgcgaggcgagagcctctactcgccatggcgagt 9426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 15421 - 15369
Alignment:
Q  53 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 105  Q
    |||||||||||||||| ||||||||| ||||||||| || | |||| ||||||    
T  15421 ctcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaa 15369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 12700 - 12756
Alignment:
Q  34 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 90  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  12700 gcactcaattctagatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 12756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 32393 - 32433
Alignment:
Q  48 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    |||| ||||||||| |||||| |||||||||||||||||||    
T  32393 aagtactcgcgaggtgagagcctctgctcgccatggcgagt 32433  T

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Target: scaffold0125 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 45597 - 45561
Alignment:
Q  52 gctcgcgaggcgagagcatctgctcgccatggcgagt 88  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  45597 gctcgcgaggcgagagcctctactcgccatggcgagt 45561  T

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