View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10384_high_2 (Length: 253)
Name: NF10384_high_2
Description: NF10384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10384_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 42508970 - 42509206
Alignment:
| Q |
1 |
agagccatcatcgactctagagaatccaccttcaggccactacaacaacaaaaaagttggaagtgaaagagatattgataatgaaagtaatagatcatca |
100 |
Q |
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| T |
42508970 |
agagccatcatcgactctagagaatccaccttcaggccactacaacaacaaaaaagttggaagtgaaagagatattgatgatgaaagtaatagatcatca |
42509069 |
T |
|
| Q |
101 |
agatcaatgagttccaatcacagtagaagaaatgatcacatgaagttgtcttttataagagatgacagagagaggtttgatttgcaagagttgctgagag |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42509070 |
agatcaatgagttccaaccacagtagaagaaatgatcacatgaagttgtcttttataagagatgacagagagaggtttgatttgcaagagttgctgagag |
42509169 |
T |
|
| Q |
201 |
cttctgctgagattttgggaagtggtttttatagttc |
237 |
Q |
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||||||| ||||||||||||||||||||||||||||| |
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| T |
42509170 |
cttctgccgagattttgggaagtggtttttatagttc |
42509206 |
T |
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