View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10385_high_9 (Length: 388)
Name: NF10385_high_9
Description: NF10385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10385_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 15 - 366
Target Start/End: Original strand, 36397427 - 36397779
Alignment:
| Q |
15 |
gtttaagataacgaaaacaaaattcactacgtgatcacgtaggctttttatcgttacatggtgaaagtttgatcacaattatatcccataaccacggtgt |
114 |
Q |
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| T |
36397427 |
gtttaagataacgaaaacaaaattcacgacgtgatcacgtaggctttttatcgttacatggtgaaagtttgatcacaattacatcccataaccacggtgt |
36397526 |
T |
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| Q |
115 |
ttttcaataagagcgtgagtgtattggtcaacaacgattaattcataatgcaattcactatgaaaagtctcctgatgtataacactgccgttgcaataat |
214 |
Q |
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| T |
36397527 |
ttttcaataagagcgtgagtgtattggtcaacaacgattaattcataatgcaattcactatgaaaactctcctgctgtataacactgccgttgcaataat |
36397626 |
T |
|
| Q |
215 |
attggtaccgtgattacactggcatcaatcatacttgtctagtaccgaaacaagtacaatccttcaactagtgccatacact-tatatgtttgaattttt |
313 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
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| T |
36397627 |
attggtaccgtgattacactggcatcaaccatacttgtctagtaccgaaacaagtacaatccttcaactagtgacatacactatatatgtttgaattttt |
36397726 |
T |
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| Q |
314 |
cgacaaacaacactttgaatctggaaaacatcattactttcctcctagataca |
366 |
Q |
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| T |
36397727 |
cgacaaacaacactttgaatctggaaaacatcattactttcctcctagataca |
36397779 |
T |
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