View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10386_high_3 (Length: 419)
Name: NF10386_high_3
Description: NF10386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10386_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 19 - 411
Target Start/End: Complemental strand, 40218461 - 40218069
Alignment:
| Q |
19 |
acttaatcatgttccctatcaggtaggaaattctatccgaacttgttttctattactattattatttgaggccatttactatttttgtttggttgaattg |
118 |
Q |
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| T |
40218461 |
acttaatcatgttccctattaggtaggaaattctatccgaacttgttttctagtactattattatttgaggtcatttactatttttgttaggttgaattg |
40218362 |
T |
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| Q |
119 |
aaaactaaattttatattggatacaacaagtgaattcgatggtgtcataaagttaactcgtaataatatagtaatatgggagttgattggaatatatgta |
218 |
Q |
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| T |
40218361 |
aaaactaaattttatattggatacaacaagtgaattcgatggtgtcataaagttaactcataataatatagtaatatgggagttggttggaatatatgta |
40218262 |
T |
|
| Q |
219 |
tctccaacctttgaaatcattagtacgtattttaaatgttgtttttgttgtctactattatattcataatcaaaagattaaacaaccaaaaacaaagacc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40218261 |
tctccaacctttgaaatcattagtacgtattttaaatggtgtttttgttgtctactattatattcataatcaaaagattaaacaaccaaaaacaaagacc |
40218162 |
T |
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| Q |
319 |
tatatataattgttgttgatgttaaatggagccatttggactattgattgaatcaaagtgggaagtattaatttcctcacacttgttcatctc |
411 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40218161 |
tatatataattgttgttgatgttaaatggagccatttggactattgattgaatcaaagtgggaagtattaatttcctcacacttgttcatctc |
40218069 |
T |
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