View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10386_low_13 (Length: 256)

Name: NF10386_low_13
Description: NF10386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10386_low_13
NF10386_low_13
[»] chr8 (36 HSPs)
chr8 (1-256)||(24692051-24692303)
chr8 (4-58)||(8587170-8587224)
chr8 (1-55)||(17006914-17006968)
chr8 (1-55)||(17570279-17570333)
chr8 (1-59)||(33057667-33057725)
chr8 (1-41)||(15688047-15688087)
chr8 (2-62)||(39571199-39571259)
chr8 (4-43)||(28463626-28463665)
chr8 (2-60)||(7785776-7785834)
chr8 (1-39)||(31758700-31758738)
chr8 (2-59)||(54611-54668)
chr8 (2-59)||(2890161-2890218)
chr8 (2-59)||(43199353-43199410)
chr8 (2-58)||(6552729-6552785)
chr8 (2-58)||(28999122-28999178)
chr8 (2-58)||(33289261-33289317)
chr8 (2-61)||(12763651-12763710)
chr8 (12-59)||(12763738-12763785)
chr8 (12-59)||(25601084-25601131)
chr8 (1-60)||(27422263-27422322)
chr8 (2-61)||(32211360-32211419)
chr8 (2-60)||(7805697-7805755)
chr8 (12-58)||(31654613-31654659)
chr8 (5-47)||(41450889-41450931)
chr8 (2-60)||(44498185-44498243)
chr8 (12-61)||(4245665-4245714)
chr8 (2-59)||(8587244-8587301)
chr8 (2-43)||(12343155-12343196)
chr8 (2-43)||(13578931-13578972)
chr8 (2-43)||(15888367-15888408)
chr8 (2-59)||(25600999-25601056)
chr8 (12-60)||(54696-54744)
chr8 (12-60)||(2890246-2890294)
chr8 (2-58)||(3304278-3304334)
chr8 (12-60)||(7785862-7785910)
chr8 (12-60)||(7805783-7805831)
[»] chr1 (33 HSPs)
chr1 (1-59)||(11897053-11897111)
chr1 (1-59)||(16448181-16448239)
chr1 (3-62)||(11897129-11897188)
chr1 (1-60)||(21537942-21538001)
chr1 (1-59)||(30800498-30800556)
chr1 (2-60)||(47588335-47588393)
chr1 (2-59)||(17556827-17556884)
chr1 (2-60)||(14984911-14984969)
chr1 (2-59)||(25694393-25694450)
chr1 (2-43)||(44955221-44955262)
chr1 (2-58)||(11796007-11796063)
chr1 (4-60)||(12483626-12483682)
chr1 (11-43)||(17556767-17556799)
chr1 (2-58)||(27159358-27159414)
chr1 (2-58)||(31842795-31842851)
chr1 (2-58)||(39401966-39402022)
chr1 (2-58)||(44668093-44668149)
chr1 (2-58)||(47777481-47777537)
chr1 (2-61)||(1050962-1051021)
chr1 (4-59)||(12213550-12213605)
chr1 (2-61)||(34042770-34042829)
chr1 (2-60)||(9981721-9981779)
chr1 (14-48)||(11989791-11989825)
chr1 (12-46)||(47588421-47588455)
chr1 (12-61)||(11795930-11795979)
chr1 (4-53)||(12043609-12043658)
chr1 (2-43)||(47216714-47216755)
chr1 (4-60)||(5392222-5392278)
chr1 (12-60)||(12483712-12483760)
chr1 (2-58)||(26471065-26471121)
chr1 (12-60)||(26471149-26471197)
chr1 (12-60)||(27159442-27159490)
chr1 (12-60)||(44668177-44668225)
[»] chr5 (22 HSPs)
chr5 (1-46)||(36595786-36595831)
chr5 (2-60)||(13033125-13033183)
chr5 (2-61)||(41989404-41989463)
chr5 (2-60)||(9395424-9395482)
chr5 (2-60)||(13103098-13103156)
chr5 (12-58)||(26350434-26350480)
chr5 (12-61)||(4443957-4444006)
chr5 (2-55)||(4444034-4444087)
chr5 (2-59)||(17025698-17025755)
chr5 (2-59)||(36563537-36563594)
chr5 (12-61)||(36563622-36563671)
chr5 (1-57)||(5174835-5174891)
chr5 (2-58)||(6126898-6126954)
chr5 (5-54)||(3346896-3346946)
chr5 (12-58)||(11795168-11795214)
chr5 (2-43)||(11795242-11795283)
chr5 (2-59)||(21576020-21576077)
chr5 (2-43)||(23360016-23360057)
chr5 (4-49)||(27081016-27081061)
chr5 (2-59)||(37642028-37642085)
chr5 (2-58)||(37148955-37149011)
chr5 (12-60)||(37149039-37149087)
[»] chr7 (29 HSPs)
chr7 (2-58)||(9575483-9575539)
chr7 (3-59)||(28469480-28469536)
chr7 (5-59)||(7661075-7661129)
chr7 (1-47)||(36033237-36033283)
chr7 (2-60)||(36583469-36583527)
chr7 (2-58)||(94318-94374)
chr7 (2-58)||(7269479-7269535)
chr7 (2-60)||(1738445-1738503)
chr7 (2-60)||(7240823-7240881)
chr7 (2-60)||(7482299-7482357)
chr7 (2-59)||(1565728-1565785)
chr7 (2-59)||(9268830-9268887)
chr7 (12-60)||(22285697-22285745)
chr7 (2-58)||(22285773-22285829)
chr7 (2-58)||(46840934-46840990)
chr7 (1-43)||(7269420-7269462)
chr7 (12-58)||(36016280-36016326)
chr7 (2-60)||(38063911-38063969)
chr7 (12-62)||(46840856-46840906)
chr7 (12-61)||(1565813-1565862)
chr7 (2-43)||(31319414-31319455)
chr7 (2-43)||(33418450-33418491)
chr7 (2-43)||(36016211-36016252)
chr7 (2-43)||(38441534-38441575)
chr7 (12-60)||(1738531-1738579)
chr7 (12-60)||(7240747-7240795)
chr7 (2-58)||(23314139-23314195)
chr7 (4-56)||(24097953-24098005)
chr7 (3-39)||(46877665-46877701)
[»] chr6 (24 HSPs)
chr6 (4-59)||(3788113-3788168)
chr6 (3-59)||(7597052-7597108)
chr6 (2-58)||(8417793-8417849)
chr6 (2-61)||(8099604-8099663)
chr6 (2-61)||(9644770-9644829)
chr6 (2-61)||(9650787-9650846)
chr6 (2-60)||(14236697-14236755)
chr6 (2-60)||(26602397-26602455)
chr6 (2-59)||(6330189-6330246)
chr6 (2-59)||(11572144-11572201)
chr6 (2-59)||(13853592-13853649)
chr6 (2-59)||(28747133-28747190)
chr6 (2-58)||(2830409-2830465)
chr6 (2-58)||(8382969-8383025)
chr6 (12-60)||(8417877-8417925)
chr6 (12-60)||(13853677-13853725)
chr6 (12-59)||(6143553-6143600)
chr6 (213-256)||(24735566-24735609)
chr6 (19-60)||(3788034-3788075)
chr6 (2-59)||(6068640-6068697)
chr6 (12-60)||(8383053-8383101)
chr6 (2-58)||(17992062-17992118)
chr6 (2-62)||(33052790-33052850)
chr6 (12-60)||(33052878-33052926)
[»] chr4 (32 HSPs)
chr4 (3-61)||(17344288-17344346)
chr4 (1-58)||(1716301-1716358)
chr4 (2-59)||(3993050-3993107)
chr4 (2-58)||(42797806-42797862)
chr4 (2-60)||(3422134-3422192)
chr4 (1-43)||(17344228-17344270)
chr4 (2-60)||(41469764-41469822)
chr4 (2-60)||(47838615-47838673)
chr4 (1-58)||(4780368-4780425)
chr4 (2-59)||(24704444-24704501)
chr4 (12-61)||(43900546-43900595)
chr4 (1-58)||(51894582-51894639)
chr4 (2-59)||(52756749-52756806)
chr4 (2-58)||(6121893-6121949)
chr4 (4-48)||(41615752-41615796)
chr4 (2-58)||(47833685-47833741)
chr4 (4-44)||(50430494-50430534)
chr4 (4-39)||(41594673-41594708)
chr4 (2-60)||(33621870-33621928)
chr4 (1-43)||(38160387-38160429)
chr4 (2-60)||(48336337-48336395)
chr4 (2-43)||(7579384-7579425)
chr4 (12-61)||(41469850-41469899)
chr4 (2-59)||(53337444-53337501)
chr4 (12-60)||(3372119-3372167)
chr4 (2-58)||(3372195-3372251)
chr4 (4-60)||(5986952-5987008)
chr4 (2-58)||(20538686-20538742)
chr4 (3-47)||(23226014-23226058)
chr4 (2-58)||(46797799-46797855)
chr4 (12-60)||(47833609-47833657)
chr4 (12-60)||(48336261-48336309)
[»] chr3 (47 HSPs)
chr3 (3-61)||(9027139-9027197)
chr3 (2-59)||(46208104-46208161)
chr3 (2-58)||(21295326-21295382)
chr3 (2-61)||(10298053-10298112)
chr3 (2-49)||(33942941-33942988)
chr3 (4-59)||(33943008-33943063)
chr3 (2-61)||(40690993-40691052)
chr3 (12-62)||(9111578-9111628)
chr3 (12-58)||(35513473-35513519)
chr3 (12-61)||(8817470-8817519)
chr3 (2-59)||(49823380-49823437)
chr3 (2-58)||(19557052-19557108)
chr3 (1-61)||(26019477-26019537)
chr3 (2-58)||(34080030-34080086)
chr3 (2-58)||(38964466-38964522)
chr3 (12-60)||(42170430-42170478)
chr3 (2-58)||(48340471-48340527)
chr3 (2-61)||(17653786-17653845)
chr3 (12-51)||(29285842-29285881)
chr3 (12-59)||(46208029-46208076)
chr3 (2-60)||(8817384-8817442)
chr3 (1-39)||(14848276-14848314)
chr3 (12-58)||(17653712-17653758)
chr3 (1-59)||(34988074-34988132)
chr3 (12-58)||(37508921-37508967)
chr3 (1-43)||(42170361-42170403)
chr3 (14-60)||(42299651-42299697)
chr3 (4-54)||(43323064-43323114)
chr3 (12-46)||(51406685-51406719)
chr3 (2-43)||(4238668-4238709)
chr3 (2-59)||(8437499-8437556)
chr3 (2-43)||(9111509-9111550)
chr3 (26-59)||(9190145-9190178)
chr3 (2-43)||(22722005-22722046)
chr3 (2-43)||(37508995-37509036)
chr3 (2-43)||(42507370-42507411)
chr3 (2-43)||(44785411-44785452)
chr3 (12-61)||(44785480-44785529)
chr3 (2-59)||(51406747-51406804)
chr3 (2-58)||(2787832-2787888)
chr3 (12-60)||(4238592-4238640)
chr3 (1-61)||(9213513-9213573)
chr3 (12-60)||(21295410-21295458)
chr3 (12-60)||(22721929-22721977)
chr3 (3-59)||(26001065-26001121)
chr3 (4-40)||(33128224-33128260)
chr3 (12-60)||(34080114-34080162)
[»] chr2 (28 HSPs)
chr2 (2-60)||(41492894-41492952)
chr2 (2-63)||(3055632-3055693)
chr2 (4-49)||(12170408-12170453)
chr2 (2-61)||(37990010-37990069)
chr2 (2-60)||(6648517-6648575)
chr2 (2-60)||(9047753-9047811)
chr2 (1-39)||(16734802-16734840)
chr2 (2-60)||(41478637-41478695)
chr2 (2-43)||(36688897-36688938)
chr2 (2-59)||(38917521-38917578)
chr2 (2-59)||(44398760-44398817)
chr2 (2-58)||(12337937-12337993)
chr2 (2-58)||(13197710-13197766)
chr2 (2-58)||(15372300-15372356)
chr2 (2-58)||(15896916-15896972)
chr2 (2-37)||(31726809-31726844)
chr2 (2-60)||(16243781-16243839)
chr2 (4-58)||(31150653-31150707)
chr2 (2-60)||(37666608-37666666)
chr2 (2-59)||(13344558-13344615)
chr2 (2-59)||(30099181-30099238)
chr2 (2-59)||(30852691-30852748)
chr2 (12-61)||(41478723-41478772)
chr2 (2-43)||(44397621-44397662)
chr2 (12-60)||(15372224-15372272)
chr2 (2-58)||(16044317-16044373)
chr2 (4-60)||(23227348-23227404)
chr2 (12-60)||(37990097-37990145)
[»] scaffold0011 (2 HSPs)
scaffold0011 (8-67)||(231294-231353)
scaffold0011 (1-58)||(231376-231433)
[»] scaffold0063 (1 HSPs)
scaffold0063 (2-59)||(53340-53397)
[»] scaffold0482 (2 HSPs)
scaffold0482 (2-60)||(12934-12992)
scaffold0482 (12-60)||(12858-12906)
[»] scaffold0464 (1 HSPs)
scaffold0464 (2-60)||(6129-6187)
[»] scaffold0204 (2 HSPs)
scaffold0204 (2-60)||(23859-23917)
scaffold0204 (12-60)||(23783-23831)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-58)||(49581-49635)
scaffold0009 (12-61)||(49502-49551)
[»] scaffold1707 (1 HSPs)
scaffold1707 (2-43)||(1409-1450)


Alignment Details
Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 24692051 - 24692303
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttgacatcaaaattttag-aaattttacataattaacnnnn 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||  ||         
T  24692051 cagatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatttgacatcaaaattttagaaaattttacataacaaa----a 24692146  T
Q  100 nnngaaatcttttagaacagcattagattggatcattagtatacactgaaattcagctcttatcgcttagattcgttnnnnnnnntaaatagatcaggag 199  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||| | |||| |||    
T  24692147 aaagaaatcttttagaacagcattagattggatcattagtatacactgaaattcagctcttatcgcttagattcgttaaaaaaaaaaaaaaaatcatgag 24692246  T
Q  200 taagaattaaaagttacaatacaaacctcagtctgaagtttttgattctgagcttga 256  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24692247 taagaattaaaagctacaatacaaacctcagtctgaagtttttgattctgagcttga 24692303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 8587224 - 8587170
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||| |||||||||||||||||| || || ||||||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17006968 - 17006914
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaaggga 55  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  17006968 cagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17570279 - 17570333
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaaggga 55  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  17570279 cagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33057667 - 33057725
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| || | |||||||    
T  33057667 cagatacatcaatttttgttgaccaaactttctcttataaataagaccggatggagtat 33057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15688087 - 15688047
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  15688087 cagatacatcaacttttgttgacccaactttctcttataaa 15688047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 39571259 - 39571199
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttg 62  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||||    
T  39571259 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttg 39571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 28463665 - 28463626
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaata 28463626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 7785834 - 7785776
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  7785834 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31758700 - 31758738
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttata 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  31758700 cagattcatcaacttttgttgacctaactttctcttata 31758738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 54668 - 54611
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  54668 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 2890218 - 2890161
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  2890218 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 43199410 - 43199353
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  43199410 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6552729 - 6552785
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  6552729 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 28999122 - 28999178
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||| ||||||||||| |||||||| |||||||||| | |||| ||||||    
T  28999122 agatacatcaatttttgttgaccaaactttcttttataaataaaaccgaatggagta 28999178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 33289317 - 33289261
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  33289317 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 12763710 - 12763651
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || |||||||||||    
T  12763710 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtattt 12763651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 12763738 - 12763785
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||| |||||||||||||||||| || ||| |||||    
T  12763738 acttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 25601084 - 25601131
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||| ||||||||||||||| ||||| ||| |||||    
T  25601084 acttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27422263 - 27422322
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||  | ||||||||||| || ||||||||||||||| || |||||||||||||    
T  27422263 cagatacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 32211419 - 32211360
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||| ||||||||||| ||  |||||||||||||| || || |||||||||||    
T  32211419 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattt 32211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 7805755 - 7805697
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||| ||||| ||  |||||||||||||| || || ||||||||||    
T  7805755 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 31654659 - 31654613
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||||||||||||| ||||||||||||||| || || ||||||||    
T  31654659 acttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 41450931 - 41450889
Alignment:
Q  5 tacatcaacttttgttgacctaactttctcttataaataagat 47  Q
    |||||||||||||||| || ||| |||||||||||||||||||    
T  41450931 tacatcaacttttgtttacttaattttctcttataaataagat 41450889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 44498243 - 44498185
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| |||||| ||  |||||||||||||| || || ||||||||||    
T  44498243 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 4245665 - 4245714
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  4245665 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 4245714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 8587244 - 8587301
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||| |||||  || |||||||||||||||||| || ||| |||||    
T  8587244 agatacatcaacttttattgactcaagtttctcttataaataagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 12343196 - 12343155
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  12343196 agatacatcaacttttgttgaccaaaaattctcttataaata 12343155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 13578931 - 13578972
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  13578931 agatacatcaacttttgttgacccaaaattctcttataaata 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 15888408 - 15888367
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  15888408 agatacatcaacttttgttgacccaaaattctcttataaata 15888367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 25601056 - 25600999
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||| |||||||||||||| ||  |||||||||||||| || || |||||||||    
T  25601056 agatacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 54696 - 54744
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  54696 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 2890246 - 2890294
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  2890246 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 3304334 - 3304278
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||    
T  3304334 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 7785862 - 7785910
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  7785862 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 7805783 - 7805831
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  7805783 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11897111 - 11897053
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||    
T  11897111 cagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16448181 - 16448239
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||||||||||| |||||||||||||||||| || || |||||||||    
T  16448181 cagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 11897129 - 11897188
Alignment:
Q  3 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttg 62  Q
    |||||||||||||||||||||| || ||||||||||||||| || || ||||||||||||    
T  11897129 gatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatttg 11897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21537942 - 21538001
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||| || |||||||    
T  21537942 cagatacatcaacttttgttgactcaattttctcttataaataagatcggagagagtatt 21538001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30800498 - 30800556
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||||||| ||| ||| ||||| | ||||||||||||||||||||||    
T  30800498 cagatacatcaacttttgttaacccaacgttctcatgtaaataagatcgaagggagtat 30800556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 47588393 - 47588335
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| | |||||||||||||    
T  47588393 agatacatcaacttttgttgacccaaaattctcttataaataaaaccgaagggagtatt 47588335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 17556827 - 17556884
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| || ||||||||||||||| || || |||||||||    
T  17556827 agatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 14984911 - 14984969
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  14984911 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 25694393 - 25694450
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  25694393 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 44955262 - 44955221
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  44955262 agatacatcaacttttgttgacctaaaattctcttataaata 44955221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 11796007 - 11796063
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  11796007 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 12483682 - 12483626
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  12483682 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 17556799 - 17556767
Alignment:
Q  11 aacttttgttgacctaactttctcttataaata 43  Q
    |||||||||||||||||||||||||||||||||    
T  17556799 aacttttgttgacctaactttctcttataaata 17556767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 27159414 - 27159358
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  27159414 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 31842851 - 31842795
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  31842851 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 39402022 - 39401966
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  39402022 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 44668149 - 44668093
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  44668149 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 47777537 - 47777481
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  47777537 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 1050962 - 1051021
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||| ||||||| ||  |||||||||||||| || || |||||||||||    
T  1050962 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtattt 1051021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 12213550 - 12213605
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||| || ||||||||||||||| |||||||||||||||||  | |||||||||    
T  12213550 atacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 34042770 - 34042829
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  ||||||||||||||  | || |||||||||||    
T  34042770 agatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 9981721 - 9981779
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||| ||||    
T  9981721 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggaatatt 9981779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 11989825 - 11989791
Alignment:
Q  14 ttttgttgacctaactttctcttataaataagatc 48  Q
    ||||||||||| |||||||||||||||||||||||    
T  11989825 ttttgttgacccaactttctcttataaataagatc 11989791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 47588421 - 47588455
Alignment:
Q  12 acttttgttgacctaactttctcttataaataaga 46  Q
    |||||||||||||||| ||||||||||||||||||    
T  47588421 acttttgttgacctaaatttctcttataaataaga 47588455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 11795979 - 11795930
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  11795979 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 12043658 - 12043609
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagg 53  Q
    |||||||||||||||||||| ||| | ||| ||||||||| |||||||||    
T  12043658 atacatcaacttttgttgacttaaatatcttttataaataggatcgaagg 12043609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 47216755 - 47216714
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  47216755 agatacatcaacttttgttgacccaaaattctcttataaata 47216714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 5392222 - 5392278
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||| ||||||||| ||||||||||| ||  || ||||| |||||||    
T  5392222 atacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtatt 5392278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 12483712 - 12483760
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  12483712 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 26471121 - 26471065
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||| | ||  |||||||||||||| || || ||||||||    
T  26471121 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 26471149 - 26471197
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  26471149 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 27159442 - 27159490
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  27159442 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 44668177 - 44668225
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  44668177 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36595831 - 36595786
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataaga 46  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  36595831 cagatacatcaatttttgttgacctaactttctcttataaataaga 36595786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 13033125 - 13033183
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||||    
T  13033125 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 41989463 - 41989404
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  41989463 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 41989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 9395424 - 9395482
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  9395424 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 13103098 - 13103156
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  13103098 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 26350434 - 26350480
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  26350434 acttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 4444006 - 4443957
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| || |||||| |||||||    
T  4444006 acttttgttgacctaaatttctcttataaataggaccgaaggaagtattt 4443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 4444034 - 4444087
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaaggga 55  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||| || |||||    
T  4444034 agatacatcaacttttgttgatctaaaattctcttataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 17025698 - 17025755
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  17025698 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 36563594 - 36563537
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  36563594 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 36563622 - 36563671
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| ||||| ||| |||||||    
T  36563622 acttttgttgacctaaatttctcttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5174891 - 5174835
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagt 57  Q
    |||||| ||||||||||||||| |||| | ||||||||||||| |||||||| ||||    
T  5174891 cagatatatcaacttttgttgatctaaatgtctcttataaatatgatcgaagtgagt 5174835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6126898 - 6126954
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  6126898 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 3346946 - 3346896
Alignment:
Q  5 tacatcaacttttgttgacctaactttctcttataaata-agatcgaaggg 54  Q
    |||||||||||||||||||  |||||||||||||| ||| |||||||||||    
T  3346946 tacatcaacttttgttgacgaaactttctcttatatatagagatcgaaggg 3346896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 11795214 - 11795168
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||||||||||||| ||||||||||||||| ||||| ||| ||||    
T  11795214 acttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 11795242 - 11795283
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  11795242 agatacatcaacttttgttgacccaaaattctcttataaata 11795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 21576020 - 21576077
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||| | ||  |||||||||||||| || || |||||||||    
T  21576020 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 23360016 - 23360057
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  23360016 agatacatcaacttttgttgacccaaaattctcttataaata 23360057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 27081016 - 27081061
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcg 49  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  27081016 atacatcaacttttgttgacctaaatgtctcttgtaaataggatcg 27081061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 37642028 - 37642085
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||| |||||| ||  |||||||||||||| || || |||||||||    
T  37642028 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 37149011 - 37148955
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||| ||||||||| || || ||||||||    
T  37149011 agatacatcaacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 37149039 - 37149087
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  37149039 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 9575483 - 9575539
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||| ||||||||||| |||||||||||||||||| || |||||||||||    
T  9575483 agatacatcaagttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 28469536 - 28469480
Alignment:
Q  3 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  28469536 gatacattaacttttgttgacctaaatgtcttttataaataagatcgaagggagtat 28469480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 7661129 - 7661075
Alignment:
Q  5 tacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||| ||||| ||| ||||||||||||||| |||||||||||||||    
T  7661129 tacatcaacttttattgacataaatttctcttataaataggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36033283 - 36033237
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagat 47  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  36033283 cagatacatcaacttttgttgacctaaatttatcttataaataagat 36033237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 36583469 - 36583527
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||||    
T  36583469 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 94374 - 94318
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||    
T  94374 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 7269479 - 7269535
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||| || ||||||||    
T  7269479 agatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 1738503 - 1738445
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  1738503 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 7240823 - 7240881
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  7240823 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 7482299 - 7482357
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  7482299 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 1565785 - 1565728
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  ||||||||||||||  | ||||||||||||    
T  1565785 agatacatcaacttttgttgacccaaaattctcttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 9268830 - 9268887
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  9268830 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 22285745 - 22285697
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||||||||||    
T  22285745 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 22285773 - 22285829
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  22285773 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 46840934 - 46840990
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  46840934 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7269462 - 7269420
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||    
T  7269462 cagatgcatcaacttttgttaacccaactttctcttataaata 7269420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 36016280 - 36016326
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||||||||||||| ||||||||||||||| || || ||||||||    
T  36016280 acttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 38063969 - 38063911
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || |  ||||||||||    
T  38063969 agatacatcaacttttgttgacccaaaattctcttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 46840906 - 46840856
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatttg 62  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||||    
T  46840906 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 46840856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 1565813 - 1565862
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  1565813 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 31319455 - 31319414
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  31319455 agatacatcaacttttgttgacccaaaattctcttataaata 31319414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 33418450 - 33418491
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  33418450 agatacatcaacttttgttgacccaaaattctcttataaata 33418491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 36016252 - 36016211
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  36016252 agatacatcaacttttgttgacccaaaattctcttataaata 36016211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 38441534 - 38441575
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  38441534 agatacatcaacttttgttgacccaaaattctcttataaata 38441575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 1738531 - 1738579
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  1738531 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 7240795 - 7240747
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  7240795 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 23314195 - 23314139
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||| ||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  23314195 agatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 24098005 - 24097953
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggag 56  Q
    |||||| || |||||||||||||| | | ||||||||| ||||||||||||||    
T  24098005 atacattaaattttgttgacctaattgtttcttataaaaaagatcgaagggag 24097953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 46877665 - 46877701
Alignment:
Q  3 gatacatcaacttttgttgacctaactttctcttata 39  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  46877665 gatacattaacttttgttgacccaactttctcttata 46877701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 3788113 - 3788168
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||||||||||| ||| |||||||||||||| || |||||||||    
T  3788113 atacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 7597052 - 7597108
Alignment:
Q  3 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||||| ||  |||||||||||||||||||||| | |||||||||    
T  7597052 gatacatcaacttttgttaacacaactttctcttataaataagattggagggagtat 7597108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 8417849 - 8417793
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || |||||||||||    
T  8417849 agatacatcaacttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 8099604 - 8099663
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  8099604 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 8099663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 9644770 - 9644829
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  9644770 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 9650787 - 9650846
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  9650787 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 14236697 - 14236755
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||| | ||||| ||||    
T  14236697 agatacatcaacttttgttgactcaactttctcttataaacaagattggagggaatatt 14236755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 26602397 - 26602455
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  26602397 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 6330189 - 6330246
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  6330189 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 11572201 - 11572144
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  11572201 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 13853649 - 13853592
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  13853649 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 28747190 - 28747133
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||  |||||||||||    
T  28747190 agatacatcaacttttgttgacccaaaattctcttataaataggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 2830409 - 2830465
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  2830409 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 8383025 - 8382969
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  8383025 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 8417877 - 8417925
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| |||||||||||||||||| |  ||||||||||    
T  8417877 acttttgttgacctaaatttctcttataaataagaccagagggagtatt 8417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 13853677 - 13853725
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || |||||| ||||||    
T  13853677 acttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 6143600 - 6143553
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||| ||||||||||||||| ||||| ||| |||||    
T  6143600 acttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 24735609 - 24735566
Alignment:
Q  213 ttacaatacaaacctcagtctgaagtttttgattctgagcttga 256  Q
    ||||||||||||| ||||||||||||||||| || |||||||||    
T  24735609 ttacaatacaaacttcagtctgaagtttttggttatgagcttga 24735566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 3788075 - 3788034
Alignment:
Q  19 ttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||| |||||||||||||||||| ||||| ||||||||||    
T  3788075 ttgacccaactttctcttataaataggatcgtagggagtatt 3788034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 6068640 - 6068697
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||  ||  |||||||||||||| || || |||||||||    
T  6068640 agatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 8383053 - 8383101
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  8383053 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 17992062 - 17992118
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||| | ||||||||||| ||  |||||||||||||| || |||||||||||    
T  17992062 agatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 33052850 - 33052790
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttg 62  Q
    |||||||||||||||| |||||| ||  |||||||||||||| || || | ||||||||||    
T  33052850 agatacatcaacttttattgacccaaaattctcttataaataggaccggatggagtatttg 33052790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 33052878 - 33052926
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  33052878 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 17344288 - 17344346
Alignment:
Q  3 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||||||| | || ||||||||||||||||||| | |||||||||||    
T  17344288 gatacatcaacttttgttgatccaaatttctcttataaataagattggagggagtattt 17344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1716358 - 1716301
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||||||||||||||||||||| || | |||||||||||||||| || ||||||||    
T  1716358 cagatacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 3993050 - 3993107
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||| || |||||||||    
T  3993050 agatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 42797806 - 42797862
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||||||  |||||||||||||| || || ||||||||    
T  42797806 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 3422134 - 3422192
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  3422134 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17344270 - 17344228
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  17344270 cagatacatcaacttttgttgatttaactttctcttataaata 17344228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 41469822 - 41469764
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  41469822 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 47838673 - 47838615
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  47838673 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4780368 - 4780425
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||| |||||||||||||| || ||||||||||||||| || || ||||||||    
T  4780368 cagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 24704444 - 24704501
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||| |||||||||||||| ||  |||||||||||||| ||||| |||||||||    
T  24704444 agatacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 43900595 - 43900546
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| || || |||||||||||    
T  43900595 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 43900546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51894639 - 51894582
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  51894639 cagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 52756749 - 52756806
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||| ||||||||| || ||||||||||||    
T  52756749 agatacatcaacttttgttgacccaaaattcttttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 6121949 - 6121893
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  6121949 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 41615752 - 41615796
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatc 48  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||    
T  41615752 atacattaacttttgttgacctaattttctcttataaataggatc 41615796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 47833685 - 47833741
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  47833685 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 50430494 - 50430534
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataa 44  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  50430494 atacatcaacttttgttgacccaacttgctcttataaataa 50430534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 41594708 - 41594673
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttata 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  41594708 atacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 33621870 - 33621928
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||||    
T  33621870 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtatt 33621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38160429 - 38160387
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaata 43  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  38160429 cagatacatcaatttttgttgacctaaatctctcttataaata 38160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 48336337 - 48336395
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||||    
T  48336337 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 48336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 7579384 - 7579425
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  7579384 agatacatcaacttttgttgacccaaaattctcttataaata 7579425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 41469850 - 41469899
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||| ||||||||| || |||||| |||||||    
T  41469850 acttttgttgacctaaatttcttttataaataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 53337444 - 53337501
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||| |||||| ||  |||||||||||||| || || |||||||||    
T  53337444 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 3372167 - 3372119
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  3372167 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 3372195 - 3372251
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||    
T  3372195 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 5986952 - 5987008
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||| ||  |||||||||||||| || || || |||||||    
T  5986952 atacatcaacttttgttgacccaaaattctcttataaataggaccggagagagtatt 5987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 20538742 - 20538686
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||| ||||||||||| ||  |||||||||||||| || || ||||||||    
T  20538742 agatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 23226058 - 23226014
Alignment:
Q  3 gatacatcaacttttgttgacctaactttctcttataaataagat 47  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||    
T  23226058 gatacatcaatttttgttgatctaaatatctcttataaataagat 23226014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 46797799 - 46797855
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||| ||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  46797799 agatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 47833657 - 47833609
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  47833657 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 48336309 - 48336261
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  48336309 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 9027197 - 9027139
Alignment:
Q  3 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||||||||| |||||| ||||||||||| || || |||||||||||    
T  9027197 gatacatcaacttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 46208104 - 46208161
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||||||  |||||||||||||| || || |||||||||    
T  46208104 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 21295382 - 21295326
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||||||  |||||||||||||| || || ||||||||    
T  21295382 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 10298053 - 10298112
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  10298053 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 33942988 - 33942941
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcg 49  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||    
T  33942988 agatacatcaacttttgttgacccaagtttctcttataaataggatcg 33942941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 33943008 - 33943063
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||||| | |||||||    
T  33943008 atacattaacttttgttgacctaactttcttttataaataggatcggaaggagtat 33943063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 40691052 - 40690993
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  40691052 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 40690993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 9111578 - 9111628
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatttg 62  Q
    |||||||||||||||| ||||||||||||||| || |||||| ||||||||    
T  9111578 acttttgttgacctaaatttctcttataaataggaccgaaggtagtatttg 9111628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 35513519 - 35513473
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||    
T  35513519 acttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 8817470 - 8817519
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| || |||||| |||||||    
T  8817470 acttttgttgacctaaatttctcttataaataggaccgaaggtagtattt 8817519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 49823437 - 49823380
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  49823437 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 19557108 - 19557052
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  19557108 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26019537 - 26019477
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||| |||||| ||||||| || ||||||||||||||| ||||| | |||||||||    
T  26019537 cagatacataaactttggttgaccaaattttctcttataaataggatcggaaggagtattt 26019477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 34080086 - 34080030
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  34080086 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 38964466 - 38964522
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  38964466 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 42170430 - 42170478
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| |||||||||||||||||| || ||| ||||||    
T  42170430 acttttgttgacctaaatttctcttataaataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 48340471 - 48340527
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  48340471 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 17653786 - 17653845
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||| |||||||    
T  17653786 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 17653845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 29285842 - 29285881
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaa 51  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  29285842 acttttgttgacctaaatttatcttataaataagatcgaa 29285881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 46208076 - 46208029
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||| ||||||||||||||| || || |||||||||    
T  46208076 acttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 8817442 - 8817384
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || | ||||||||    
T  8817442 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14848314 - 14848276
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttata 39  Q
    |||||||||||||||||||||||| || |||||||||||    
T  14848314 cagatacatcaacttttgttgacccaattttctcttata 14848276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 17653758 - 17653712
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||||||||||||| ||||||||||||||| || || ||||||||    
T  17653758 acttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34988132 - 34988074
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||| ||||||||||||||||| || | ||||| ||||||| || ||||||||||||    
T  34988132 cagatagatcaacttttgttgacccaaatgtctctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 37508967 - 37508921
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||||||||||||| ||||||||||||||| || || ||||||||    
T  37508967 acttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42170403 - 42170361
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaata 43  Q
    |||||||||||||||||||||||| ||  ||||||||||||||    
T  42170403 cagatacatcaacttttgttgacccaaaattctcttataaata 42170361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 42299651 - 42299697
Alignment:
Q  14 ttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||| | |||||||||||||||||| ||||| ||||||||||    
T  42299651 ttttgttgatccaactttctcttataaatacgatcggagggagtatt 42299697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 43323114 - 43323064
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaaggg 54  Q
    ||||||||||||||||||||| || ||| ||||||||||| ||| ||||||    
T  43323114 atacatcaacttttgttgacccaattttttcttataaataggatggaaggg 43323064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 51406719 - 51406685
Alignment:
Q  12 acttttgttgacctaactttctcttataaataaga 46  Q
    |||||||||||||||| ||||||||||||||||||    
T  51406719 acttttgttgacctaaatttctcttataaataaga 51406685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 4238668 - 4238709
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  4238668 agatacatcaacttttgttgaccaaaaattctcttataaata 4238709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 8437499 - 8437556
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||  ||  |||||||||||||| || || |||||||||    
T  8437499 agatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 9111550 - 9111509
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  9111550 agatacatcaacttttgttgacccaaaattctcttataaata 9111509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 9190145 - 9190178
Alignment:
Q  26 aactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||||| |||||||||||||||    
T  9190145 aactttctcttataaataggatcgaagggagtat 9190178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 22722005 - 22722046
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  22722005 agatacatcaacttttgttgacccaaaattctcttataaata 22722046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 37508995 - 37509036
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  37508995 agatacatcaacttttgttgacccaaaattctcttataaata 37509036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 42507411 - 42507370
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  42507411 agatacatcaacttttgttgacccaaaattctcttataaata 42507370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 44785452 - 44785411
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  44785452 agatacatcaacttttgttgacccaaaattctcttataaata 44785411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 44785480 - 44785529
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  44785480 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 51406747 - 51406804
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||| ||||||||||| ||  |||||||||||||| || || |||||||||    
T  51406747 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 2787888 - 2787832
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||| ||||| ||  |||||||||||||| || || ||||||||    
T  2787888 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 4238640 - 4238592
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  4238640 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9213573 - 9213513
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||||||||||  || | ||| ||||||||| || || |||||||||||    
T  9213573 cagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagtattt 9213513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 21295410 - 21295458
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  21295410 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 22721977 - 22721929
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  22721977 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 26001121 - 26001065
Alignment:
Q  3 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||| |||||||||| |||||| |  ||||| |||||||||||||| ||||||||||    
T  26001121 gatatatcaacttttattgacccagatttctattataaataagatcaaagggagtat 26001065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 33128260 - 33128224
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataa 40  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  33128260 atacattaacttttgttgacctaaatttctcttataa 33128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 34080114 - 34080162
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  34080114 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 41492952 - 41492894
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| || ||||||||||||||| || || ||||||||||    
T  41492952 agatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 3055632 - 3055693
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttga 63  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||||    
T  3055632 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttga 3055693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 12170453 - 12170408
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcg 49  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  12170453 atacatcaacttttgttgacccaagtttctcttataaataagatcg 12170408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 37990069 - 37990010
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  37990069 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 37990010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 6648575 - 6648517
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  6648575 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 9047811 - 9047753
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  9047811 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16734840 - 16734802
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16734840 cagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 41478695 - 41478637
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  41478695 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 36688938 - 36688897
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  36688938 agatacatcaacgtttgttgaccaaactttctcttataaata 36688897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 38917578 - 38917521
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  38917578 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 44398760 - 44398817
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  44398760 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 12337993 - 12337937
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  12337993 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 13197766 - 13197710
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  13197766 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 15372300 - 15372356
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  15372300 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 15896916 - 15896972
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  15896916 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 31726844 - 31726809
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctctta 37  Q
    |||||||||||||||||||||||||||||| |||||    
T  31726844 agatacatcaacttttgttgacctaactttatctta 31726809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 16243839 - 16243781
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || | ||||||||    
T  16243839 agatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagtatt 16243781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 31150707 - 31150653
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    |||||| |||||||||||||  |||||||||||||||||| ||||| || |||||    
T  31150707 atacataaacttttgttgacgcaactttctcttataaataggatcggagagagta 31150653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 37666666 - 37666608
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||| ||||||| ||  |||||||||||||| || || ||||||||||    
T  37666666 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 13344558 - 13344615
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||| | ||  |||||||||||||| || || |||||||||    
T  13344558 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 30099238 - 30099181
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    ||||||||||||||||||||||| ||  |||||| ||||||| || || |||||||||    
T  30099238 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 30852691 - 30852748
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||| ||||||| || | |||||||||||||||||||| || || |||||||||    
T  30852691 agatacataaacttttattaatctaactttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 41478723 - 41478772
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  41478723 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 41478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 44397621 - 44397662
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  44397621 agatacatcaacttttgttgacccaaaattctcttataaata 44397662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 15372272 - 15372224
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| ||  | ||||||||||    
T  15372272 acttttgttgacctaaatttctcttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 16044373 - 16044317
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||| ||||||| ||  |||||||||||||| || || ||||||||    
T  16044373 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 23227348 - 23227404
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||| || | ||||||||||||| ||  ||||| ||||||    
T  23227348 atacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 37990097 - 37990145
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  37990097 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 231353 - 231294
Alignment:
Q  8 atcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttgacatc 67  Q
    ||||||||||||||||||||  ||||| |||||||| || || |||||||||||||||||    
T  231353 atcaacttttgttgacctaatattctcctataaataggaccggagggagtatttgacatc 231294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 231376 - 231433
Alignment:
Q  1 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||| |||||||||||| | ||||||||||||||| || ||||| ||||||||    
T  231376 cagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 53397 - 53340
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 59  Q
    |||||||||||||||||||  || |||||||| ||||||||||||||| | |||||||    
T  53397 agatacatcaacttttgttatccaaactttcttttataaataagatcggatggagtat 53340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 12934 - 12992
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||| ||||| ||  |||||||||||||| || || ||||||||||    
T  12934 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 12906 - 12858
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  12906 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 6187 - 6129
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||||    
T  6187 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 6129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 23859 - 23917
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||||    
T  23859 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 23917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 23831 - 23783
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtatt 60  Q
    |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  23831 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 23783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 49581 - 49635
Alignment:
Q  4 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 58  Q
    ||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  49581 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 49551 - 49502
Alignment:
Q  12 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 61  Q
    |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  49551 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 49502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 1409 - 1450
Alignment:
Q  2 agatacatcaacttttgttgacctaactttctcttataaata 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  1409 agatacatcaacttttgttgacccaaaattctcttataaata 1450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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