View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10388_low_13 (Length: 237)
Name: NF10388_low_13
Description: NF10388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10388_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 37212492 - 37212712
Alignment:
| Q |
1 |
tttcgtctctttttgtttctaggcaataattcttataatgcactgttattatacttcaatatatgcagaactgcacttcggcaaagcatggtccagtgga |
100 |
Q |
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| T |
37212492 |
tttcgtctctttttgtttctagtcaataattcttataatgcactgttattatacttcaatatatgcagagctgcacttcggcaaagcatggtccagtgga |
37212591 |
T |
|
| Q |
101 |
gggaaaaacttggccagaccaccatagatttgggaatagcccctgataagttaatatatcaggagaatggagaaacaaaagtaatagacccaatagatag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
37212592 |
gggaaaaacttggccagaccaccatagatttgggaatagcccctgataagttaatatatcaggagaatggagaaacaaaagtaacagacccaatagatag |
37212691 |
T |
|
| Q |
201 |
attgaagtctataaagggact |
221 |
Q |
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||||||||||||||||||||| |
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| T |
37212692 |
attgaagtctataaagggact |
37212712 |
T |
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