View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10389_high_11 (Length: 251)
Name: NF10389_high_11
Description: NF10389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10389_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 32151670 - 32151518
Alignment:
| Q |
1 |
cgttgaatcaagtactcatgaactatgttctttgtttgttattgttacttggatagttaatttaaaattcaaataannnnnnnncatttgatttgattaa |
100 |
Q |
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| T |
32151670 |
cgttgaattatgtactcatgaactatgttctttgtttgttattgttacttggatagttaatttaaaattcaaatattgttttttcatttgatttgattaa |
32151571 |
T |
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| Q |
101 |
aaatgttcctcctctttctcctttgaaatataaagttattgttatctagtatg |
153 |
Q |
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||||||||||||||||| |||||||||||||||||||||||| |||||||||| |
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| T |
32151570 |
aaatgttcctcctctttttcctttgaaatataaagttattgtaatctagtatg |
32151518 |
T |
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