View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10389_low_18 (Length: 273)
Name: NF10389_low_18
Description: NF10389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10389_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 42037203 - 42037445
Alignment:
| Q |
20 |
taatgcagcttcttcttcgagccaaaaacaattgtcacctcgtaaggacttaaaaaagagtagaagacgatctctcaatggaactaagtgtgcgagtgca |
119 |
Q |
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| T |
42037203 |
taatgcagcttcttcttcgagccaaaaacaattgtcacctcgtaaggacttaaaaaagagtagaagacgatctctcaatggaactaagtgtgcgagtgca |
42037302 |
T |
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| Q |
120 |
aataagagatgggtttagtagcgagtaagtcagcttgaatcaccaactattccaattagcaaatgccnnnnnnnaccttgaaattctggaattcgattta |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |
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| T |
42037303 |
aataagagatgggtttagtagcgagtaagtcagcttgaatcaccaactattccgattagcaaatgcctttttttaccttgaaattctggaattcgattta |
42037402 |
T |
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| Q |
220 |
cattaaggtgacttccatgtagatatgcttatttcgtgttcat |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42037403 |
cattaaggtgacttccatgtagatatgcttatttcgtgttcat |
42037445 |
T |
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