View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10389_low_24 (Length: 238)
Name: NF10389_low_24
Description: NF10389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10389_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 48223291 - 48223125
Alignment:
| Q |
1 |
catgtaaacaaaattggatagtgttattctaatcttaagatgctacctannnnnnnnnnnnnnnnnnnnnnnngatatgtccatgaagaatttttaaata |
100 |
Q |
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| T |
48223291 |
catgtaaacaaaattggatagtgttattctaatcttaagatgctacctattttttactcatcttttttgttttgatatgtccatgaagaatttccaaata |
48223192 |
T |
|
| Q |
101 |
atcaactcttattttgctcttggtattttgtcttcagtcacgtcgcggcttttgttgttacactacg |
167 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48223191 |
atcaactcttattttgctcttggtattttgtcttcagtcacgtcgcggcttttgttgttacactacg |
48223125 |
T |
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