View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10389_low_6 (Length: 435)
Name: NF10389_low_6
Description: NF10389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10389_low_6 |
 |  |
|
| [»] scaffold0001 (1 HSPs) |
 |  |  |
|
| [»] scaffold0221 (1 HSPs) |
 |  |  |
|
| [»] scaffold0281 (1 HSPs) |
 |  |  |
|
| [»] scaffold0500 (1 HSPs) |
 |  |  |
|
| [»] scaffold0069 (1 HSPs) |
 |  |  |
|
| [»] scaffold0204 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 24)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 336
Target Start/End: Complemental strand, 25409449 - 25409116
Alignment:
| Q |
18 |
aaaggtaaccggaggtttggatcataagagagaaggcacccagcatccttggcaacttccattgccttcagatgtgctgatctacatggctccacaatca |
117 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
25409449 |
aaaggtaacctaaggtttggatcataagagagaaggcacccagcatccttggcaacttccattgccttcagatgtgctgatctgcatggctccacaatca |
25409350 |
T |
 |
| Q |
118 |
aacttatcgatccataatgaaatacttttgcctgaaaaatcatgtttcataattcaattactct---------------ttggtggcaaattgatcaaga |
202 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| |
|
|
| T |
25409349 |
aacttatcgatccataatggaatacttttgcctgaaaaatcatgtttcataattcaattactcttaggcattcgagacataggtgaaaaattgatcaaga |
25409250 |
T |
 |
| Q |
203 |
tcgaactatccaaaacaatgcagattttgatttgtgttataatttaaaaacttggatcatctgatttgaccatcacactctcatcgatttgacccttaaa |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
25409249 |
tcgaactatccaaaacaatgcagattttgatttgtgttataatttaaaaacttggatcatctgatttgaccatcacactcccatcgatttgacccttaaa |
25409150 |
T |
 |
| Q |
303 |
ctaataaaatcaactaaaaggttccaaaattata |
336 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
25409149 |
ctaataaaatcaactaaaaggttccaaaattata |
25409116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 31152670 - 31152735
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
31152670 |
cgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
31152735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 39170967 - 39171032
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
39170967 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatttt |
39171032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 55631929 - 55631864
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
55631929 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatttt |
55631864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 43047398 - 43047461
Alignment:
| Q |
345 |
tcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||| |||||||| || | |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
43047398 |
tcccgcaataaatgacttgtttgaaaatgtgcaattttaacctaacttactttgaccatatttt |
43047461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 3708262 - 3708327
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||| | | ||||||||||||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
3708262 |
cgtcccacaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatttt |
3708327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 10384857 - 10384922
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| ||| |||||||||| |
|
|
| T |
10384857 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaaccatatttt |
10384922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 37667828 - 37667763
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
37667828 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgaccatatttt |
37667763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 40411655 - 40411598
Alignment:
| Q |
351 |
aataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
40411655 |
aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
40411598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 46608222 - 46608287
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | |||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
46608222 |
cgtcccgcaataaatgacctgtttgaaaatgtgaaattttgacctaacttactttgaccatatttt |
46608287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 43447195 - 43447239
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
43447195 |
tttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
43447239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 48380482 - 48380547
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||| | || | |||||||||||||| |||| |||||||||| |||||||||||||| |
|
|
| T |
48380482 |
cgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgaccatatttt |
48380547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 29821080 - 29821124
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| | |||||||| |||||||||||||| |
|
|
| T |
29821080 |
tttgaaaatgtgcaattttgatctaacttactttgaccatatttt |
29821124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 33394111 - 33394151
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
33394111 |
aaaatgtgcaattttgacctaacttactttgaccatatttt |
33394151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 39332863 - 39332819
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| | |||||||| |||||||||||||| |
|
|
| T |
39332863 |
tttgaaaatgtgcaattttgaactaacttactttgaccatatttt |
39332819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 53987809 - 53987769
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
53987809 |
aaaatgtgcaatattaacctaacttactttgaccatatttt |
53987769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 31657410 - 31657345
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||| ||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
31657410 |
cgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgaccatatttt |
31657345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 43140166 - 43140211
Alignment:
| Q |
296 |
ccttaaactaataaaatcaactaaaaggttccaaaattatactctc |
341 |
Q |
| |
|
|||||||||||| |||||||||||||||| | ||||||||||||| |
|
|
| T |
43140166 |
ccttaaactaatcaaatcaactaaaaggtccataaattatactctc |
43140211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 48336482 - 48336417
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| ||||| || ||| ||||||||||||||||||| |||||||||| ||||| | |||||| |
|
|
| T |
48336482 |
cgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttactttgatcgtatttt |
48336417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 1377533 - 1377577
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
1377533 |
tttgaaaatttgcaattttgacctatcttactttgaccatatttt |
1377577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 1613251 - 1613207
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| |||||| ||| |||||||||||||| |
|
|
| T |
1613251 |
tttgaaaatgtgtaattttgacctaatttactttgaccatatttt |
1613207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 42185304 - 42185348
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
42185304 |
tttgaaaatttgcaattttgacctaatttagtttgaccatatttt |
42185348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 47834177 - 47834133
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| || ||||||| |||||||||||||| |
|
|
| T |
47834177 |
tttgaaaatgtgtaattttgacataacttactttgaccatatttt |
47834133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 52818718 - 52818674
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| |||||||| ||||| |
|
|
| T |
52818718 |
tttgaaaatgtgtaattttaacctaatttactttgaccacatttt |
52818674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 20)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 42376724 - 42376603
Alignment:
| Q |
30 |
aggtttggatcataagagagaaggcacccagcatccttggcaacttccattgccttcagatgtgctgatctacatggctccacaatcaaacttatcgatc |
129 |
Q |
| |
|
||||| |||||||| ||||||||||| ||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
42376724 |
aggttaggatcataggagagaaggcagccagcctctttggcaacttccaatgccttcaagtgtgctgatctacatggctccacaatcaagcttatggatc |
42376625 |
T |
 |
| Q |
130 |
cataatgaaatacttttgcctg |
151 |
Q |
| |
|
|||| || || ||||| ||||| |
|
|
| T |
42376624 |
catagtggaaaactttagcctg |
42376603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 7724665 - 7724600
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
7724665 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
7724600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 12208998 - 12209063
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
12208998 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
12209063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 31603470 - 31603405
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||| || | ||||||||||||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
31603470 |
cgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacaatatttt |
31603405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 40471745 - 40471810
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| ||||||||||| | ||||||||||||||||||| || ||||||||||||| |||||||| |
|
|
| T |
40471745 |
cgtcccgcaataaataacctgtttgaaaatgtgcaattttgacttaacttattttgatcatatttt |
40471810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 16126145 - 16126071
Alignment:
| Q |
335 |
tactctctc-gtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||| |||||||| || ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
16126145 |
tactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
16126071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 16333480 - 16333554
Alignment:
| Q |
335 |
tactctctc-gtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||| |||||||| || ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
16333480 |
tactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
16333554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 8373464 - 8373508
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
8373464 |
tttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
8373508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 8896301 - 8896345
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
8896301 |
tttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
8896345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 10333611 - 10333567
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
10333611 |
tttgaaaatgtgtaattttgacctaacttattttgaccatatttt |
10333567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 38963825 - 38963869
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
38963825 |
tttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
38963869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 44022298 - 44022342
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
44022298 |
tttgaaaatgtgcaattttaacctaacttactttgactatatttt |
44022342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 5096257 - 5096322
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||| ||||||| || ||||||||||||| |||||||| |
|
|
| T |
5096257 |
cgtcccgcaataaattacctgtttgaaaatgtacaattttgacataacttattttgatcatatttt |
5096322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 16127834 - 16127769
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | |||||||||||| |||||| |||||||||| ||||| |||||||| |
|
|
| T |
16127834 |
cgtcccgcaataaatgacctatttgaaaatgtgtaattttgacctaacttactttgatcatatttt |
16127769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 18504502 - 18504546
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| || |||||||||||||||||||||| |
|
|
| T |
18504502 |
tttgaaaatgtgtaattttgacgtaacttattttgaccatatttt |
18504546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 408
Target Start/End: Original strand, 41436826 - 41436906
Alignment:
| Q |
329 |
aaattatactctctc-gtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||| ||| ||||| ||||||| | || ||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
41436826 |
aaattatactccctccgtcccgtaataaatgaaatgtttgaaaatgtataattttgacctaacttactttgaccatatttt |
41436906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 11277562 - 11277625
Alignment:
| Q |
345 |
tcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||| |||||||| || | ||||||||||||||||||| || ||||||| ||||| |||||||| |
|
|
| T |
11277562 |
tcccgcaataaatgacctatttgaaaatgtgcaattttgacataacttactttgatcatatttt |
11277625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 2831741 - 2831781
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
2831741 |
aaaatgtgtaattttgacctaacttactttgaccatatttt |
2831781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 15177399 - 15177443
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||| ||||||||| ||||||| |||||||||||||| |
|
|
| T |
15177399 |
tttgaaaatgtacaattttaatttaacttactttgaccatatttt |
15177443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 22718576 - 22718532
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
22718576 |
tttgaaaatttgcaattttgacctagcttactttgaccatatttt |
22718532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 25)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 408
Target Start/End: Complemental strand, 30721738 - 30721675
Alignment:
| Q |
345 |
tcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
30721738 |
tcccgcaataaatgacatatttgaaaatgtgcaattttgacctaacttattttgaccatatttt |
30721675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 19344754 - 19344689
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19344754 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatttt |
19344689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 1098184 - 1098249
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
1098184 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
1098249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 14607612 - 14607547
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
14607612 |
cgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttaatttgaccatatttt |
14607547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 31191232 - 31191167
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
31191232 |
cgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttactttgaccatatttt |
31191167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 20022876 - 20022934
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
20022876 |
caataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
20022934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 1781200 - 1781135
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
1781200 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaagttactttgaccatatttt |
1781135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 20040462 - 20040405
Alignment:
| Q |
351 |
aataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
20040462 |
aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
20040405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 41263184 - 41263119
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | || ||| ||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
41263184 |
cgtccctcaataaatgatatgtttaaaaatgtgcaattttgacctaacttactttgaccatatttt |
41263119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 13548243 - 13548287
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
13548243 |
tttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
13548287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 14633037 - 14633081
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
14633037 |
tttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
14633081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 32474056 - 32474012
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
32474056 |
tttgaaaatgtgtaattttaacataacttattttgaccatatttt |
32474012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 8627144 - 8627209
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| ||||| || || | ||||||||||||||||||| | |||||||| |||||||||||||| |
|
|
| T |
8627144 |
cgtcccgcaatagatgacctatttgaaaatgtgcaattttgatctaacttactttgaccatatttt |
8627209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 9936943 - 9936878
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | || ||| ||||||||||||||| | |||| |||||||||||||||||| |
|
|
| T |
9936943 |
cgtcccgcaataaatgatatatttaaaaatgtgcaattttgatctaatttattttgaccatatttt |
9936878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 30211796 - 30211731
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||| ||||||||||||||| | |||||||| |||||||||||||| |
|
|
| T |
30211796 |
cgtcccgcaataaatgacctgtttaaaaatgtgcaattttgatctaacttactttgaccatatttt |
30211731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 40079990 - 40080055
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||| |||||| || || | ||||||||| | |||||||||||||||||| |||||||||||||| |
|
|
| T |
40079990 |
cgtcctacaatagatgacctatttgaaaatttacaattttaacctaacttactttgaccatatttt |
40080055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 40316827 - 40316892
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||| ||| || ||||||||||| |
|
|
| T |
40316827 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttacttcgaccatatttt |
40316892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 41410714 - 41410649
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||| ||| || ||||||||||| |
|
|
| T |
41410714 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttacttcgaccatatttt |
41410649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 2551657 - 2551617
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
2551657 |
aaaatgtgcaattttgacctaacttattttaaccatatttt |
2551617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 28142958 - 28143002
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||||| |||| ||| |||||||||||||| |
|
|
| T |
28142958 |
tttgaaaatgtgcaattttaatctaatttactttgaccatatttt |
28143002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 408
Target Start/End: Complemental strand, 41042890 - 41042827
Alignment:
| Q |
345 |
tcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||| ||||||||||| | ||||||||| ||||||||| | ||| |||| |||||||||||||| |
|
|
| T |
41042890 |
tcccgcaataaataacctatttgaaaatttgcaattttgatctagcttactttgaccatatttt |
41042827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 1831360 - 1831425
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| || ||| ||| || ||||||||||| |
|
|
| T |
1831360 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacataatttacttcgaccatatttt |
1831425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Original strand, 2799661 - 2799697
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgac |
400 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
2799661 |
tttgaaaatgtgcaattttgacctaacttactttgac |
2799697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 30788235 - 30788279
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| || ||||||| |||||||||||||| |
|
|
| T |
30788235 |
tttgaaaatgtgtaattttgacataacttactttgaccatatttt |
30788279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 34347497 - 34347541
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| || ||||||| |||||||||||||| |
|
|
| T |
34347497 |
tttgaaaatgtgtaattttgacataacttactttgaccatatttt |
34347541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 30464441 - 30464506
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
30464441 |
cgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
30464506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 25691642 - 25691584
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
25691642 |
caataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
25691584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 8496917 - 8496873
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
8496917 |
tttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
8496873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 4327171 - 4327106
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| | |||||||| ||||| |||||||| |
|
|
| T |
4327171 |
cgtcccgcaataaatgacttgtttgaaaatgtgcaattttgatctaacttactttgatcatatttt |
4327106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 14378738 - 14378673
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
14378738 |
cgtcccgcaataaatgataggtttgaaaatgtgcaattttgacctaacttactttgactatatttt |
14378673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 23437865 - 23437800
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||| || |||||||||||||| |
|
|
| T |
23437865 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttgctttgaccatatttt |
23437800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 25009153 - 25009218
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
25009153 |
cgtccctcaataaatgatctgtttgaaaatgtgcaattttgacctaatttactttgaccatatttt |
25009218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 28583355 - 28583290
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| ||||| || || ||||||||||||||||||||| |||||| ||| ||||| |||||||| |
|
|
| T |
28583355 |
cgtcccgcaatagatgacctttttgaaaatgtgcaattttgacctaatttactttgagcatatttt |
28583290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 37094141 - 37094206
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
37094141 |
cgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatttt |
37094206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 44887767 - 44887702
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| |||| ||||| |||||||||||||| |
|
|
| T |
44887767 |
cgtcccgcaataaatgatctatttgaaaatgtgcaattttgacctgacttagtttgaccatatttt |
44887702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 761560 - 761624
Alignment:
| Q |
344 |
gtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||| |||||||| || | |||||||||||| |||||| |||||| ||| |||||||||||||| |
|
|
| T |
761560 |
gtcccgcaataaatgacctgtttgaaaatgtgtaattttgacctaatttactttgaccatatttt |
761624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 11756806 - 11756850
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| |||||||||| |||||||||||||| |
|
|
| T |
11756806 |
tttgaaaatttgcaattttgacctaacttactttgaccatatttt |
11756850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 17523835 - 17523879
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| |||||||| |
|
|
| T |
17523835 |
tttgaaaatgtgcagttttaacctaacttactttgatcatatttt |
17523879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 20671286 - 20671330
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
20671286 |
tttgaaaatgtgtaattttgacctaacttactttgaccatatttt |
20671330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 21132959 - 21132915
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| || ||||||| |||||||||||||| |
|
|
| T |
21132959 |
tttgaaaatgtgcaattttgacttaacttactttgaccatatttt |
21132915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 29917955 - 29917915
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
29917955 |
aaaatgtgtaattttgacctaacttattttgaccatatttt |
29917915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 30653394 - 30653434
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
30653394 |
aaaatgtgcaattttaatctaacttactttgaccatatttt |
30653434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 4960181 - 4960225
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
4960181 |
tttgaaaatttgcaattttgacctagcttactttgaccatatttt |
4960225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 12948049 - 12948114
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
12948049 |
cgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
12948114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 16434907 - 16434842
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16434907 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatttt |
16434842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 9484605 - 9484670
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
9484605 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
9484670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 29793428 - 29793363
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
29793428 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
29793363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 34669617 - 34669682
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
34669617 |
cgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgatcatatttt |
34669682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 42098677 - 42098612
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
42098677 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
42098612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 46866352 - 46866417
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||| | ||||||| |
|
|
| T |
46866352 |
cgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttattttggcaatatttt |
46866417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 49076476 - 49076411
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
49076476 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
49076411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 53275045 - 53274980
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
53275045 |
cgtcccgcaataaatgacctatttgaaaatgtgcaattttgacctaacttattttgatcatatttt |
53274980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 408
Target Start/End: Complemental strand, 36364812 - 36364748
Alignment:
| Q |
342 |
tcgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||| ||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
36364812 |
tcgtcccgcaataaataacctatttgaaaatg--caattttgacctaacttattttgaccatatttt |
36364748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 36179195 - 36179121
Alignment:
| Q |
335 |
tactctctc-gtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||||||||||| | ||||||||||||||||||| || ||| ||| ||||| |||||||| |
|
|
| T |
36179195 |
tactctctccgtcccacaataaataacctgtttgaaaatgtgcaattttgacttaatttactttgatcatatttt |
36179121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 29455750 - 29455693
Alignment:
| Q |
351 |
aataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
29455750 |
aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
29455693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 34263754 - 34263689
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||| ||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
34263754 |
cgtcccgcaataaatgacctgtttaaaaatgtgcaattttgacctaacttactttgaccatatttt |
34263689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 48927852 - 48927787
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
48927852 |
cgtcccgcaataaatgatctgtttgaaaatgtgcaatttttacctaacttactttgaccatatttt |
48927787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 50673693 - 50673751
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| || | ||||||||||||||||||| || ||||||| |||||||||||||| |
|
|
| T |
50673693 |
caataaatgacctgtttgaaaatgtgcaattttgacttaacttactttgaccatatttt |
50673751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 901138 - 901073
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
901138 |
cgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatttt |
901073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 34555160 - 34555225
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||| | || | |||||||||||||| |||| |||||||||| |||||||||||||| |
|
|
| T |
34555160 |
cgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgaccatatttt |
34555225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 38878520 - 38878463
Alignment:
| Q |
351 |
aataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||| || | ||||||||||||||||||| || ||| |||||||||||||||||| |
|
|
| T |
38878520 |
aataaatgacctgtttgaaaatgtgcaattttgacataaattattttgaccatatttt |
38878463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 53055675 - 53055610
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||| ||||||||| || |||||||||||| |||||| |||||||| |||||||||||||||| |
|
|
| T |
53055675 |
cgtcctacaataaatgaccaatttgaaaatgtgtaattttgacctaactaattttgaccatatttt |
53055610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 36594448 - 36594404
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||| |||||||| |
|
|
| T |
36594448 |
tttgaaaatgtgtaattttgacctaacttattttgatcatatttt |
36594404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 38834014 - 38833950
Alignment:
| Q |
344 |
gtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||| |||||||| || | ||| |||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
38834014 |
gtcccgcaataaatgacctgtttaaaaatgtgtaattttgacctaacttactttgaccatatttt |
38833950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 43394587 - 43394543
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||| | | ||||||||||||||||||||||| |
|
|
| T |
43394587 |
tttgaaaatgtgcaattctgatctaacttattttgaccatatttt |
43394543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 4945901 - 4945836
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| ||| || || | ||||| ||| ||||||||| |||||||||| |||||||||||||| |
|
|
| T |
4945901 |
cgtcccaccatagatgacgtatttgagaatttgcaattttgacctaacttactttgaccatatttt |
4945836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 29720404 - 29720469
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| |||||||||| ||||| | |||||| |
|
|
| T |
29720404 |
cgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcctatttt |
29720469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 1325576 - 1325532
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||| ||||||| |
|
|
| T |
1325576 |
tttgaaaatttgcaattttaacctaacttactttgattatatttt |
1325532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 32961280 - 32961320
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||| ||||||||| |||||||||| |||||||||||||| |
|
|
| T |
32961280 |
aaaatttgcaattttgacctaacttagtttgaccatatttt |
32961320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 52094123 - 52094079
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| | |||||||| |||||||||||||| |
|
|
| T |
52094123 |
tttgaaaatttgcaattttgatctaacttaatttgaccatatttt |
52094079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 23)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 10100572 - 10100507
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
10100572 |
cgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
10100507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 52749290 - 52749355
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
52749290 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaatttttacctaacttattttgaccatatttt |
52749355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 45299327 - 45299392
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
45299327 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
45299392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 10124120 - 10124183
Alignment:
| Q |
345 |
tcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
10124120 |
tcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
10124183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 5945765 - 5945839
Alignment:
| Q |
335 |
tactctctc-gtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||| |||||||| |||| ||||||||||||||||||| || ||| ||||||| |||||||||| |
|
|
| T |
5945765 |
tactctctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacataatttattttaaccatatttt |
5945839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 343 - 409
Target Start/End: Complemental strand, 8251208 - 8251142
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatattttc |
409 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| | |||||||| ||||||||||||||| |
|
|
| T |
8251208 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgatctaacttactttgaccatattttc |
8251142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 44741359 - 44741417
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| |||| |||||| |||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
44741359 |
caataaatgacatatttgaatatgtgcaattttgatctaacttattttgaccatatttt |
44741417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 31651960 - 31651895
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | |||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
31651960 |
cgtcccgcaataaatgacctatttgaaaatgtgcaattttaacctggcttaatttgaccatatttt |
31651895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 1821666 - 1821622
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
1821666 |
tttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
1821622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 10648239 - 10648195
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
10648239 |
tttgaaaatgtgtaattttgacctaacttattttgaccatatttt |
10648195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 6017508 - 6017443
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| | |||||||| |||||||||||||| |
|
|
| T |
6017508 |
cgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttgaccatatttt |
6017443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 26543877 - 26543942
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||| ||||||| |||||||||| |||||||||||||| |
|
|
| T |
26543877 |
cgtcccgcaataaatgatctgtttgaaaatgtacaattttgacctaacttactttgaccatatttt |
26543942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 41855860 - 41855795
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||| |||||| ||||| | |||||||||| ||| | |||||||||| ||||||||||||||||| |
|
|
| T |
41855860 |
cgtcctacaatagataacctatttgaaaatgagcattattaacctaacatattttgaccatatttt |
41855795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 8048786 - 8048742
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
8048786 |
tttgaaaatttgcaattttgacctagcttattttgaccatatttt |
8048742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 44452225 - 44452269
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
44452225 |
tttgaaaatgtgtaattttgacctaacttactttgaccatatttt |
44452269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 408
Target Start/End: Complemental strand, 7075387 - 7075324
Alignment:
| Q |
345 |
tcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||| |||||||| || | |||||||| |||||||||| | |||||||| |||||||||||||| |
|
|
| T |
7075387 |
tcccgcaataaatgacttgtttgaaaacgtgcaattttgatctaacttactttgaccatatttt |
7075324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 48389082 - 48389140
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| || | ||||||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
48389082 |
caataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatttt |
48389140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 41855772 - 41855715
Alignment:
| Q |
351 |
aataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||| || | ||||||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
41855772 |
aataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatttt |
41855715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 43453196 - 43453159
Alignment:
| Q |
371 |
atgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
43453196 |
atgtgtaattttgacctaacttattttgaccatatttt |
43453159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 44240528 - 44240593
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||| ||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
44240528 |
cgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgaccatatttt |
44240593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 12685936 - 12685892
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| | |||| ||||||||| |||||||| |
|
|
| T |
12685936 |
tttgaaaatgtgcaattttgatctaatttattttgatcatatttt |
12685892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 29253509 - 29253553
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
29253509 |
tttgaaaatttgcaattttgacctagcttactttgaccatatttt |
29253553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 41414233 - 41414277
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
41414233 |
tttgaaaatttgcaattttgacctagcttactttgaccatatttt |
41414277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 183982 - 184040
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||| | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
183982 |
caataaataacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
184040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0221 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0221
Description:
Target: scaffold0221; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 5385 - 5450
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
5385 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
5450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 408
Target Start/End: Original strand, 40231945 - 40232002
Alignment:
| Q |
351 |
aataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
40231945 |
aataaataacctgtttgaaaatgtgcaattttgacctaatttattttgaccatatttt |
40232002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 38069067 - 38069125
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
38069067 |
caataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
38069125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 16807193 - 16807136
Alignment:
| Q |
351 |
aataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
16807193 |
aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
16807136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 46242514 - 46242470
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
46242514 |
tttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
46242470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 35693878 - 35693820
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| || | ||||||||||||||||||| |||||||||| || ||||||||||| |
|
|
| T |
35693878 |
caataaatgacctgtttgaaaatgtgcaattttgacctaacttacttcgaccatatttt |
35693820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 36819632 - 36819690
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| || | ||||||||||||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
36819632 |
caataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgatcatatttt |
36819690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 4620096 - 4620141
Alignment:
| Q |
363 |
ttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
4620096 |
ttttgaaaatgtgtaattttgacctaacttactttgaccatatttt |
4620141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 30462276 - 30462211
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| || ||||||| |||||||||||||| |
|
|
| T |
30462276 |
cgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacttaacttactttgaccatatttt |
30462211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 37101081 - 37101016
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| ||||| || || | |||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
37101081 |
cgtcccgcaatagatgacctatttgaaaatgtgtaattttgacctaacttactttgaccatatttt |
37101016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 25274051 - 25274011
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccata |
404 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
25274051 |
tttgaaaatgtgcaattttgacctaacttactttgaccata |
25274011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 28016145 - 28016189
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| | |||||||| |||||||||||||| |
|
|
| T |
28016145 |
tttgaaaatgtgcaattttgatctaacttactttgaccatatttt |
28016189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 38441843 - 38441887
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
38441843 |
tttgaaaatgtgtaatttttacctaacttactttgaccatatttt |
38441887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 38850732 - 38850776
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
38850732 |
tttgaaaatgtgtaattttgacctaacttactttgaccatatttt |
38850776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 47713466 - 47713422
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||| |||||| |
|
|
| T |
47713466 |
tttgaaaatgtgcaattttgacctaacttactttgaccgtatttt |
47713422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 5842147 - 5842191
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||||| |||| ||| ||||| |||||||| |
|
|
| T |
5842147 |
tttgaaaatgtgcaattttaatctaatttactttgatcatatttt |
5842191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 19817335 - 19817379
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||| ||||||| |
|
|
| T |
19817335 |
tttgaaaatgtataattttaacctaacttactttgacaatatttt |
19817379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 31496679 - 31496635
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||| ||||||| |||||||||| ||||||| |||||| |
|
|
| T |
31496679 |
tttgaaaatgtacaattttgacctaacttactttgaccgtatttt |
31496635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 40818731 - 40818687
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| | |||||||| | |||||||||||| |
|
|
| T |
40818731 |
tttgaaaatgtgcaattttgatctaacttactctgaccatatttt |
40818687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 24798605 - 24798540
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
24798605 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
24798540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 2397779 - 2397844
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||||||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
2397779 |
cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgaccatatttt |
2397844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 17496377 - 17496312
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
17496377 |
cgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
17496312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 408
Target Start/End: Original strand, 24825190 - 24825239
Alignment:
| Q |
359 |
acatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
24825190 |
acatgtttgaaaatgtgcaattttgacctaacttactttgaccatatttt |
24825239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 35117310 - 35117354
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
35117310 |
tttgaaaatgtgcaattttaacataacttactttgaccatatttt |
35117354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 2656729 - 2656664
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
2656729 |
cgtcccgcaataaatgagctgtttgaaaatgtgcaattttgacctaacttactttgactatatttt |
2656664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 2667384 - 2667319
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
2667384 |
cgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgactatatttt |
2667319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 408
Target Start/End: Complemental strand, 6188699 - 6188650
Alignment:
| Q |
359 |
acatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
6188699 |
acatgtttgaaaatgtgcaattttgacctaacttactttgagcatatttt |
6188650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 408
Target Start/End: Original strand, 13358522 - 13358583
Alignment:
| Q |
347 |
ccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| || || | |||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
13358522 |
ccacaatagatgacttatttgaaaatgtgtaattttgacctaacttactttgaccatatttt |
13358583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 29515077 - 29515020
Alignment:
| Q |
351 |
aataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||| |||| | ||||||||||||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
29515077 |
aataagtaacctgtttgaaaatgtgcaattttgacctaacttactttgatcatatttt |
29515020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 32541536 - 32541471
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| || | ||||||||| ||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
32541536 |
cgtcccgcaataaatgacctgtttgaaaatatgcaattttgacctaatttactttgaccatatttt |
32541471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 6142545 - 6142501
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
6142545 |
tttgaaaatgtgcaattttgacctaacttactttgatcatatttt |
6142501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 9022856 - 9022914
Alignment:
| Q |
350 |
caataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| || | ||||||||| ||||||||| ||||||| || |||||||||||||| |
|
|
| T |
9022856 |
caataaatgacctgtttgaaaatatgcaattttgacctaacatactttgaccatatttt |
9022914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 28483047 - 28483112
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| | |||||||| ||| |||||||||| |
|
|
| T |
28483047 |
cgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaaccatatttt |
28483112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 29795460 - 29795525
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| |||||||| | | ||||||||||||||||||| | |||||||| ||| |||||||||| |
|
|
| T |
29795460 |
cgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaaccatatttt |
29795525 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 2141598 - 2141642
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||| ||||||| |||||||||| ||||| |||||||| |
|
|
| T |
2141598 |
tttgaaaatgtacaattttgacctaacttactttgatcatatttt |
2141642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 4890160 - 4890120
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
4890160 |
aaaatgtgcaattttgacctaatttactttgaccatatttt |
4890120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 16661640 - 16661596
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||||| |||||||||| ||||||| |||||| |
|
|
| T |
16661640 |
tttgaaaatgtgtaattttgacctaacttactttgaccgtatttt |
16661596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 16969408 - 16969452
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||||||| || ||| ||| |||||||||||||| |
|
|
| T |
16969408 |
tttgaaaatgtgcaattttgacttaatttactttgaccatatttt |
16969452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 30699295 - 30699335
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
30699295 |
aaaatgtgtaattttgacctaacttactttgaccatatttt |
30699335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 31948679 - 31948635
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||||||||| |||| | || |||||||||||||||||||||| |
|
|
| T |
31948679 |
tttgaaaatgtgtaattatgacttaacttattttgaccatatttt |
31948635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 32673782 - 32673822
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||||||| |
|
|
| T |
32673782 |
aaaatttgcaattttgatctaacttattttgaccatatttt |
32673822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0281 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0281
Description:
Target: scaffold0281; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 13095 - 13178
Alignment:
| Q |
326 |
ccaaaattatactctctc-gtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||| |||||| ||| |||||||||||||| || | ||| ||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
13095 |
ccaaaatcatactccctccgtcccacaataaatgacctgtttaaaaatttgcaattttgacctagcttactttgaccatatttt |
13178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0500 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 709 - 665
Alignment:
| Q |
364 |
tttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||| ||||||||| |||||||||| |||||||||||||| |
|
|
| T |
709 |
tttgaaaatatgcaattttgacctaacttagtttgaccatatttt |
665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 4475 - 4515
Alignment:
| Q |
368 |
aaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
4475 |
aaaatgtgcaattttgacctaacttattttgaccgtatttt |
4515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0204 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0204
Description:
Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 24004 - 23939
Alignment:
| Q |
343 |
cgtcccacaataaataacatttttgaaaatgtgcaattttaacctaacttattttgaccatatttt |
408 |
Q |
| |
|
|||||| ||||| || ||| ||||||||||||||||||| |||||||||| ||||| | |||||| |
|
|
| T |
24004 |
cgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttactttgatcgtatttt |
23939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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