View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10390_low_7 (Length: 387)

Name: NF10390_low_7
Description: NF10390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10390_low_7
NF10390_low_7
[»] chr2 (28 HSPs)
chr2 (1-331)||(26895255-26895585)
chr2 (1-331)||(19803047-19803377)
chr2 (1-308)||(21244761-21245068)
chr2 (1-331)||(22702022-22702352)
chr2 (1-259)||(26900694-26900952)
chr2 (1-281)||(10898481-10898758)
chr2 (43-249)||(27039696-27039900)
chr2 (1-280)||(19357138-19357412)
chr2 (10-249)||(24782655-24782891)
chr2 (75-202)||(14692656-14692780)
chr2 (75-249)||(5984548-5984719)
chr2 (328-377)||(41300886-41300935)
chr2 (70-202)||(25084558-25084689)
chr2 (328-377)||(21072645-21072694)
chr2 (60-281)||(18389926-18390143)
chr2 (2-281)||(22670888-22671162)
chr2 (176-281)||(25044521-25044624)
chr2 (164-249)||(5033121-5033205)
chr2 (1-54)||(12629640-12629693)
chr2 (13-53)||(6262921-6262961)
chr2 (13-53)||(18872910-18872950)
chr2 (13-53)||(19664342-19664382)
chr2 (13-53)||(19665301-19665341)
chr2 (13-53)||(21078113-21078153)
chr2 (328-371)||(22841975-22842019)
chr2 (265-298)||(23084983-23085016)
chr2 (2-94)||(2524520-2524611)
chr2 (13-53)||(9239973-9240013)
[»] chr3 (33 HSPs)
chr3 (1-331)||(1990170-1990500)
chr3 (1-331)||(13027303-13027634)
chr3 (9-331)||(16326220-16326541)
chr3 (1-331)||(34853493-34853822)
chr3 (36-281)||(36526859-36527104)
chr3 (33-281)||(3265772-3266020)
chr3 (1-154)||(21081495-21081648)
chr3 (1-281)||(16727518-16727795)
chr3 (1-188)||(20416466-20416651)
chr3 (76-281)||(15024998-15025200)
chr3 (75-281)||(9643651-9643855)
chr3 (60-216)||(12507593-12507748)
chr3 (1-202)||(53647651-53647850)
chr3 (2-249)||(22308369-22308613)
chr3 (1-249)||(14440127-14440372)
chr3 (328-377)||(10833265-10833314)
chr3 (328-377)||(10952687-10952736)
chr3 (328-377)||(10953616-10953665)
chr3 (65-281)||(12513566-12513774)
chr3 (328-377)||(18893728-18893777)
chr3 (65-249)||(19574092-19574273)
chr3 (46-281)||(8492900-8493132)
chr3 (1-249)||(35066296-35066538)
chr3 (13-53)||(3801224-3801264)
chr3 (13-53)||(16840887-16840927)
chr3 (13-53)||(20250617-20250657)
chr3 (13-53)||(51609063-51609103)
chr3 (1-249)||(42328014-42328260)
chr3 (13-53)||(10556258-10556298)
chr3 (13-53)||(11911924-11911964)
chr3 (17-53)||(24341509-24341545)
chr3 (13-53)||(29546788-29546828)
chr3 (13-53)||(38313630-38313670)
[»] chr6 (21 HSPs)
chr6 (1-331)||(13762975-13763305)
chr6 (1-331)||(29417759-29418088)
chr6 (1-331)||(29849359-29849689)
chr6 (13-247)||(5112203-5112436)
chr6 (2-202)||(20412542-20412740)
chr6 (328-377)||(29415513-29415562)
chr6 (1-216)||(24551229-24551443)
chr6 (65-202)||(23017885-23018021)
chr6 (43-188)||(31736393-31736536)
chr6 (13-53)||(4475049-4475089)
chr6 (13-53)||(10989028-10989068)
chr6 (13-53)||(15815909-15815949)
chr6 (13-53)||(21321105-21321145)
chr6 (13-53)||(27222080-27222120)
chr6 (256-298)||(23621879-23621921)
chr6 (298-331)||(1583932-1583965)
chr6 (17-53)||(1253654-1253690)
chr6 (263-295)||(3852727-3852759)
chr6 (13-49)||(18857086-18857122)
chr6 (13-53)||(25737390-25737430)
chr6 (13-53)||(34298314-34298354)
[»] scaffold0001 (3 HSPs)
scaffold0001 (15-337)||(391084-391406)
scaffold0001 (107-249)||(31179-31320)
scaffold0001 (107-249)||(36486-36627)
[»] chr5 (24 HSPs)
chr5 (1-331)||(22468829-22469159)
chr5 (1-331)||(23537344-23537673)
chr5 (1-318)||(22358919-22359227)
chr5 (1-236)||(6555186-6555421)
chr5 (1-236)||(6554585-6554820)
chr5 (1-206)||(10815511-10815715)
chr5 (1-191)||(23540494-23540683)
chr5 (2-282)||(25251323-25251599)
chr5 (2-282)||(25315108-25315384)
chr5 (1-249)||(26760502-26760747)
chr5 (43-281)||(16226193-16226429)
chr5 (328-377)||(23539812-23539861)
chr5 (298-331)||(22358896-22358929)
chr5 (13-53)||(22338266-22338306)
chr5 (13-53)||(22748509-22748549)
chr5 (13-53)||(23114188-23114228)
chr5 (13-53)||(28372866-28372906)
chr5 (13-53)||(37806218-37806258)
chr5 (284-331)||(10815714-10815761)
chr5 (267-298)||(21906174-21906205)
chr5 (13-53)||(22334736-22334776)
chr5 (299-331)||(24278105-24278137)
chr5 (299-331)||(24384076-24384108)
chr5 (13-53)||(36448159-36448199)
[»] chr4 (26 HSPs)
chr4 (1-331)||(4832447-4832776)
chr4 (1-331)||(4829152-4829481)
chr4 (1-331)||(4835742-4836071)
chr4 (2-331)||(15988838-15989167)
chr4 (13-281)||(33184864-33185131)
chr4 (13-281)||(14184033-14184299)
chr4 (13-281)||(14187572-14187838)
chr4 (111-282)||(15607743-15607912)
chr4 (8-249)||(10358122-10358360)
chr4 (111-217)||(32467735-32467842)
chr4 (328-377)||(15747513-15747562)
chr4 (328-377)||(24046436-24046485)
chr4 (1-197)||(21060873-21061066)
chr4 (328-377)||(4830114-4830163)
chr4 (328-377)||(4833409-4833458)
chr4 (75-282)||(16027697-16027900)
chr4 (9-162)||(19961-20112)
chr4 (43-100)||(51992238-51992295)
chr4 (13-53)||(2754472-2754512)
chr4 (13-53)||(18210858-18210898)
chr4 (13-53)||(30145124-30145164)
chr4 (13-53)||(43258993-43259033)
chr4 (298-331)||(33685314-33685347)
chr4 (299-331)||(3336651-3336683)
chr4 (13-53)||(14046742-14046782)
chr4 (13-53)||(24049255-24049295)
[»] chr7 (39 HSPs)
chr7 (1-328)||(48742248-48742575)
chr7 (1-289)||(14189945-14190233)
chr7 (1-290)||(15212486-15212774)
chr7 (1-287)||(13254314-13254598)
chr7 (2-211)||(14192781-14192990)
chr7 (44-281)||(32997008-32997242)
chr7 (77-249)||(10660719-10660887)
chr7 (65-249)||(13151323-13151505)
chr7 (1-249)||(36706362-36706607)
chr7 (1-249)||(44373023-44373268)
chr7 (1-249)||(44381879-44382124)
chr7 (65-249)||(11065570-11065752)
chr7 (65-249)||(15121003-15121185)
chr7 (43-249)||(17131205-17131407)
chr7 (8-202)||(36686997-36687189)
chr7 (2-249)||(12370379-12370623)
chr7 (328-377)||(831590-831639)
chr7 (328-377)||(1196770-1196819)
chr7 (328-377)||(11662152-11662201)
chr7 (328-377)||(34958608-34958657)
chr7 (32-281)||(4070110-4070355)
chr7 (109-281)||(13700377-13700547)
chr7 (3-202)||(32435258-32435455)
chr7 (231-331)||(14192694-14192782)
chr7 (31-249)||(14220702-14220913)
chr7 (13-53)||(145787-145827)
chr7 (13-53)||(16004252-16004292)
chr7 (13-53)||(16110675-16110715)
chr7 (13-53)||(34956304-34956344)
chr7 (45-98)||(14553002-14553055)
chr7 (121-198)||(15280724-15280800)
chr7 (298-331)||(15732196-15732229)
chr7 (13-53)||(834744-834784)
chr7 (13-53)||(854785-854825)
chr7 (13-53)||(1199924-1199964)
chr7 (13-53)||(1212789-1212829)
chr7 (13-53)||(11659562-11659602)
chr7 (13-53)||(14419975-14420015)
chr7 (13-49)||(16252441-16252477)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-331)||(47219-47548)
[»] chr8 (26 HSPs)
chr8 (1-281)||(19878425-19878704)
chr8 (1-297)||(24977284-24977579)
chr8 (79-287)||(41682435-41682642)
chr8 (172-331)||(19881266-19881425)
chr8 (43-281)||(39696274-39696509)
chr8 (1-281)||(25849928-25850204)
chr8 (1-280)||(19664127-19664402)
chr8 (8-281)||(23946630-23946899)
chr8 (43-202)||(22585242-22585399)
chr8 (1-249)||(20180251-20180496)
chr8 (1-249)||(21398278-21398523)
chr8 (1-249)||(21792771-21793016)
chr8 (109-249)||(23417795-23417934)
chr8 (75-281)||(42267251-42267455)
chr8 (2-188)||(17216932-17217116)
chr8 (60-290)||(6103359-6103586)
chr8 (1-182)||(8490-8669)
chr8 (65-281)||(17908360-17908572)
chr8 (113-216)||(22243859-22243962)
chr8 (75-187)||(23888145-23888256)
chr8 (70-197)||(20453428-20453553)
chr8 (13-53)||(25066519-25066559)
chr8 (13-53)||(27943406-27943446)
chr8 (8-178)||(18759368-18759537)
chr8 (12-52)||(12576100-12576140)
chr8 (13-49)||(25648248-25648284)
[»] scaffold0577 (2 HSPs)
scaffold0577 (12-281)||(6711-6979)
scaffold0577 (12-54)||(9800-9842)
[»] chr1 (18 HSPs)
chr1 (12-281)||(12359772-12360040)
chr1 (1-196)||(21652413-21652608)
chr1 (39-249)||(24725705-24725913)
chr1 (43-217)||(42696104-42696277)
chr1 (43-281)||(45753852-45754087)
chr1 (43-281)||(22348755-22348991)
chr1 (60-198)||(24724344-24724481)
chr1 (43-279)||(51475216-51475449)
chr1 (328-377)||(28313395-28313444)
chr1 (65-280)||(19762472-19762689)
chr1 (75-280)||(1641725-1641927)
chr1 (13-53)||(16370189-16370229)
chr1 (75-198)||(19674804-19674926)
chr1 (13-53)||(21341388-21341428)
chr1 (13-53)||(29533239-29533279)
chr1 (111-187)||(13301275-13301349)
chr1 (298-331)||(28205170-28205203)
chr1 (13-53)||(32648319-32648359)
[»] scaffold0117 (2 HSPs)
scaffold0117 (13-281)||(41961-42229)
scaffold0117 (13-53)||(19434-19474)
[»] scaffold0335 (2 HSPs)
scaffold0335 (1-190)||(8541-8730)
scaffold0335 (276-331)||(8742-8797)
[»] scaffold0026 (2 HSPs)
scaffold0026 (8-224)||(144904-145118)
scaffold0026 (13-53)||(108854-108894)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-281)||(94615-94892)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-249)||(7343-7587)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-202)||(69337-69536)
[»] scaffold0220 (1 HSPs)
scaffold0220 (75-249)||(16853-17024)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-281)||(3995-4271)
scaffold0075 (9-162)||(59660-59811)
[»] scaffold0042 (2 HSPs)
scaffold0042 (43-216)||(48247-48420)
scaffold0042 (79-198)||(27701-27818)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-249)||(79083-79328)
[»] scaffold0509 (1 HSPs)
scaffold0509 (2-249)||(10498-10741)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-249)||(396838-397082)
[»] scaffold0671 (1 HSPs)
scaffold0671 (109-217)||(4316-4424)
[»] scaffold0375 (1 HSPs)
scaffold0375 (1-202)||(10152-10351)
[»] scaffold0328 (1 HSPs)
scaffold0328 (2-249)||(17361-17602)
[»] scaffold0321 (1 HSPs)
scaffold0321 (78-281)||(1430-1630)
[»] scaffold0021 (2 HSPs)
scaffold0021 (251-331)||(145314-145394)
scaffold0021 (330-377)||(147670-147717)
[»] scaffold1600 (1 HSPs)
scaffold1600 (2-249)||(1339-1585)
[»] scaffold0589 (1 HSPs)
scaffold0589 (75-281)||(2757-2959)
[»] scaffold1243 (1 HSPs)
scaffold1243 (143-249)||(923-1028)
[»] scaffold0010 (1 HSPs)
scaffold0010 (2-216)||(127913-128125)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-198)||(330287-330482)
scaffold0004 (109-188)||(108665-108742)
[»] scaffold0462 (1 HSPs)
scaffold0462 (2-174)||(4999-5169)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-200)||(171293-171490)
[»] scaffold1223 (1 HSPs)
scaffold1223 (13-53)||(2175-2215)
[»] scaffold0337 (1 HSPs)
scaffold0337 (13-53)||(11611-11651)
[»] scaffold0241 (1 HSPs)
scaffold0241 (1-202)||(565-758)
[»] scaffold0080 (1 HSPs)
scaffold0080 (13-53)||(27720-27760)
[»] scaffold0059 (1 HSPs)
scaffold0059 (10-54)||(57618-57662)
[»] scaffold0037 (2 HSPs)
scaffold0037 (13-53)||(66180-66220)
scaffold0037 (70-188)||(114154-114269)
[»] scaffold0019 (2 HSPs)
scaffold0019 (13-53)||(138667-138707)
scaffold0019 (13-53)||(24993-25033)
[»] scaffold0090 (1 HSPs)
scaffold0090 (231-281)||(16856-16906)
[»] scaffold0842 (1 HSPs)
scaffold0842 (13-50)||(4562-4599)
[»] scaffold0381 (1 HSPs)
scaffold0381 (298-331)||(14529-14562)
[»] scaffold0599 (1 HSPs)
scaffold0599 (13-53)||(3618-3658)
[»] scaffold0445 (1 HSPs)
scaffold0445 (75-131)||(3539-3594)
[»] scaffold0247 (2 HSPs)
scaffold0247 (13-53)||(3578-3618)
scaffold0247 (13-53)||(18849-18889)
[»] scaffold0180 (2 HSPs)
scaffold0180 (13-49)||(821-857)
scaffold0180 (13-49)||(5141-5177)
[»] scaffold0139 (1 HSPs)
scaffold0139 (12-52)||(22398-22438)
[»] scaffold0089 (1 HSPs)
scaffold0089 (13-49)||(857-893)
[»] scaffold0064 (1 HSPs)
scaffold0064 (13-53)||(66519-66559)
[»] scaffold0046 (1 HSPs)
scaffold0046 (13-53)||(14833-14873)
[»] scaffold0012 (1 HSPs)
scaffold0012 (13-53)||(224929-224969)


Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 26895255 - 26895585
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||    
T  26895255 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagcaaaattactatttatttcaatcatttcataa 26895354  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  26895355 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaa 26895454  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||| ||    
T  26895455 cagtcttcaacataaaagtcataataaatcacgtaatatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcatgtgtac 26895554  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
    |  ||||||||||||||||||||||||||||    
T  26895555 aataactaacagctactactctgcatcacct 26895585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 19803047 - 19803377
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||| || |||||| ||| ||||| ||||||||||||||||||| ||||||    
T  19803047 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttaaaacgtaaatataacaaaattactatttatttcaatcatttcataa 19803146  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||    
T  19803147 tatcaaaattaaatctcaatgaagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacctaataaaaatccagtctaaa 19803246  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |  || ||||||||||||||||||||||||||||| ||||    
T  19803247 cagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccacaccccgttacgtatcagagcacctaagactcatgcgaac 19803346  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
    ||||||||| ||||||||| |||||||||||    
T  19803347 agcaactaatagctactacactgcatcacct 19803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 21244761 - 21245068
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||    
T  21244761 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagcaaaattactatttatttcaatcatttcataa 21244860  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  21244861 tatcaaaattaaatctcaatgcatcggaaaatatcttaataaaacattatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaa 21244960  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  21244961 cagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatctccatcctgttacgtatcagagcacctaagactcatgtgaac 21245060  T
Q  301 agcaacta 308  Q
    | ||||||    
T  21245061 aacaacta 21245068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 22702022 - 22702352
Alignment:
Q  1 ttttttag-cataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcata 99  Q
    |||||||| |||||||||||||| || ||||||||||||||| |||||||||||||| | |||| |||||||   ||||||| ||||||||||| |||||    
T  22702022 ttttttagtcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcata 22702120  T
Q  100 atatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaa 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||||||||||||||||||||||||| |||||    
T  22702121 atatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcttcaacttaaacaacttaataaaaatccaatctaa 22702220  T
Q  200 acagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaa 299  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||||||| ||||||| |    
T  22702221 acagtcttcaacataaaagtcattataaatcacgtaacatatggaaaacaataaagatcctcatctcgttacgtatcagagcacctaagattcatgtgta 22702320  T
Q  300 cagcaactaacagctactactctgcatcacct 331  Q
    | |||||||||||| |||||||||||||||||    
T  22702321 ccgcaactaacagcaactactctgcatcacct 22702352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 26900694 - 26900952
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||    
T  26900694 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagcaaaattactatttatttcaatcatttcataa 26900793  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  26900794 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaa 26900893  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcc 259  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  26900894 cagtcttcaacataaaagtcataataaatcacgtaatatatggaaaacaataaagatcc 26900952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 10898758 - 10898481
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||  | ||| ||||||||||||||   |||| |||| |||  |||||||||||||||||||||||||     
T  10898758 tttttttgcataaatcagagtaaaacaactaaaataggatgctacacttctttcaaatataaatatagtaaagttactatttatttcaatcatctcatat 10898659  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| | ||||||||||||||||||||||| || | ||| ||||||| ||||| | ||||||||| ||||||||| |||| || ||||||||||||| |    
T  10898658 catca-atttaaatctcaatgcagcggaaaacatttaaattaaacatcgtgttggcgcaacgaccttaacttaaacgactt-attaaaatccagtctaga 10898561  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    | | |||| ||||| ||| | |||||||| ||| ||||| ||||||||||   ||||||| | ||| |||||||||||||||    
T  10898560 cgaatctttaacat-aaattcataataaa-cacataacacatggaaaacaaacaagatccccatcccgttacgtatcagagc 10898481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 43 - 249
Target Start/End: Complemental strand, 27039900 - 27039696
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    ||||||||||  || | |||| ||||||||| |||||| |||||||||||||  ||   |||| ||||||||||||||||||||||||| | || |||      
T  27039900 tacacttcttataatcataaatatagcaaaattactatatatttcaatcatcatatgtcatca-aattaaatctcaatgcagcggaaaacaactaaattc 27039802  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 241  Q
    |||||| ||||| ||||| | |||||||||||| |||||| |||||||||||| ||||| |  ||||||||||||| | ||||||||| |||||||| ||    
T  27039801 aacatcgtgttggcacaatggcctcaacttaaataacttattaaaaatccagtttaaacaaaacttcaacataaaa-tcataataaat-acgtaacacat 27039704  T
Q  242 ggaaaaca 249  Q
    ||||||||    
T  27039703 ggaaaaca 27039696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 19357138 - 19357412
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| |||||||| |||||| || | || |||| | ||| ||||||||||||||   |||| |||| |||| ||||||||||||||||||||||||      
T  19357138 tttttttgcataaattagagta-aacaactaaaacaggatgctacacttctttcaaatataaatatagtaaaattactatttatttcaatcatctcatgt 19357236  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| | |||||| |||||||||||||||| ||  ||||  || ||| |  || ||||||| ||||||||||||||||||| | |||||||| |||| |    
T  19357237 catca-atttaaatatcaatgcagcggaaaacat--taatttaatatcgtaatggcacaacggcctcaacttaaacaacttatttaaaatccaatctaga 19357333  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagag 280  Q
    | | |||||||||| ||| | ||||||||| ||| |||| |||||||||| | ||||||| | ||| ||||||||||||||    
T  19357334 caaatcttcaacat-aaattcataataaat-acgcaacacatggaaaacaatcaagatccccttcccgttacgtatcagag 19357412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 24782891 - 24782655
Alignment:
Q  10 ataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataat 109  Q
    ||||||||||||| || | || |||| | ||| ||||||||||||||   | || |||| |||| || |||||||||||||||||  ||   |||| |||    
T  24782891 ataaatcagagtaaaacaact-aaacaggatgctacacttctttcaaatatgaatatagtaaaattaatatttatttcaatcatcatatgtcatca-aat 24782794  T
Q  110 taaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttc 208  Q
    ||||||||| |||||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| ||||| |  ||||    
T  24782793 taaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaagtccagtttaaacaaaacttc 24782694  T
Q  209 aacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    ||||||||| | || |||||| |||||||| ||||||||||    
T  24782693 aacataaaa-tcatgataaat-acgtaacacatggaaaaca 24782655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 14692656 - 14692780
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    ||||||||||||||||||||||||   |||| | |||||||| |||||||||||||| |  | |||  |||||||||||| ||||||| |||||||||||    
T  14692656 tactatttatttcaatcatctcatgtcatca-acttaaatcttaatgcagcggaaaacaattaaattcaacatcatgttggcacaacggcctcaacttaa 14692754  T
Q  175 acaacttaataaaaatccagtctaaaca 202  Q
    |||||||| |  ||||||||||||||||    
T  14692755 acaacttatt--aaatccagtctaaaca 14692780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 249
Target Start/End: Original strand, 5984548 - 5984719
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    ||||||||||||||||||||||||   |||| | ||||||||||||||||||||||| || | |||  |||||| ||||| ||||||| ||||||||| |    
T  5984548 tactatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacggcctcaacttta 5984646  T
Q  175 acaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    |||||||  | |||||||||| ||||| | ||||||||| |||| | ||||||||| |||||| | ||||||||||    
T  5984647 acaactt-gttaaaatccagtttaaacaaatcttcaacacaaaa-tcataataaat-acgtaatacatggaaaaca 5984719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 41300935 - 41300886
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41300935 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 41300886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 25084558 - 25084689
Alignment:
Q  70 aaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaa 169  Q
    |||| ||||||||||||||||||||  ||   |||| |||||||||||| |||||||||||  | || | |  |||||||||||| ||||||||||||||    
T  25084558 aaaattactatttatttcaatcatcatatgtcatca-aattaaatctcattgcagcggaaatcaactaagttcaacatcatgttggcacaacgacctcaa 25084656  T
Q  170 cttaaacaacttaataaaaatccagtctaaaca 202  Q
     |||||||||||||| ||||| |||| ||||||    
T  25084657 tttaaacaacttaattaaaattcagtttaaaca 25084689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 21072694 - 21072645
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21072694 accttagttttgatgaacaaactcttacagaatcagattctccccctttg 21072645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 281
Target Start/End: Complemental strand, 18390143 - 18389926
Alignment:
Q  60 taaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacaca 159  Q
    |||| |||| |||| ||||||||||||||||||||||||   |||| | ||||||||||||||||||||||| || | |||  ||| || ||||| ||||    
T  18390143 taaatatagtaaaattactatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattcaacttcgtgttggcaca 18390045  T
Q  160 acgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatc 258  Q
    ||  |||||||||||| |||||| |  ||||| ||||||||| | ||||| ||||||| |  |||||||| | ||||||| ||||||||||   |||||     
T  18390044 acagcctcaacttaaataacttatt--aaatctagtctaaacaaatcttc-acataaatg-cataataaa-cgcgtaacacatggaaaacaagtaagatt 18389950  T
Q  259 ct-cgtcctgttacgtatcagagc 281  Q
    || | |||||||||||||||||||    
T  18389949 ctccatcctgttacgtatcagagc 18389926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 281
Target Start/End: Original strand, 22670888 - 22671162
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   |||| |||| |||  |||||||||||||||| |||||||       
T  22670888 ttttttgcataaatcagagtaaaacaactaaaacaggatgctacacttctttcaaatataaatatagtaaagttactatttatttcaataatctcatgtc 22670987  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| | || ||| ||||||| |||||||| |  ||||   |||||| |  || ||||||| ||||||| || ||||||| || |||||||| |||| |     
T  22670988 atca-atttcaatatcaatgcggcggaaaaca--ttaaattaacatcgtaatggcacaacggcctcaacatagacaactt-attaaaatccaatctagat 22671083  T
Q  202 ag-tcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
     | |||||||||||||| | || || |||||||||||| ||||||||||   ||||||||| ||| |||||||||||||||    
T  22671084 ggttcttcaacataaaa-tcat-atcaatcacgtaacacatggaaaacaagtaagatcctcatcccgttacgtatcagagc 22671162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 281
Target Start/End: Original strand, 25044521 - 25044624
Alignment:
Q  176 caacttaataaaaatccagtctaaacagtc-ttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgta 274  Q
    ||||||| ||||||||| || |||||| || ||||||||||||   ||||||||| |||||||| ||||||||||||||| |||||| ||| ||||||||    
T  25044521 caacttattaaaaatccggtttaaacaatccttcaacataaaacc-ataataaat-acgtaacacatggaaaacattaaa-atcctcatcccgttacgta 25044617  T
Q  275 tcagagc 281  Q
    |||||||    
T  25044618 tcagagc 25044624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 5033205 - 5033121
Alignment:
Q  164 cctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    ||||||||||||||||||||| |||||||||| ||||| |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  5033205 cctcaacttaaacaacttaattaaaatccagtttaaacaaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 5033121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12629693 - 12629640
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttc 54  Q
    |||||| | ||||||||||||| || ||||||||||||||| ||||||||||||    
T  12629693 tttttttgtataaatcagagtaaaacaccttaaacggaatgctacacttctttc 12629640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 6262961 - 6262921
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  6262961 aatcagagtaaaacaccttaaacggaatgttacacttcttt 6262921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 18872950 - 18872910
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  18872950 aatcagagtaaaacaccttaaacggaatgttacacttcttt 18872910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 19664382 - 19664342
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  19664382 aatcagagtaaaacaccttaaacggaatgttacacttcttt 19664342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 19665341 - 19665301
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  19665341 aatcagagtaaaacaccttaaacggaatgttacacttcttt 19665301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 21078153 - 21078113
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  21078153 aatcagagtaaaacaccttaaacggaatgttacacttcttt 21078113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 371
Target Start/End: Original strand, 22841975 - 22842019
Alignment:
Q  328 accttagttttgatgaacaaa-ctcttacacaatcagattctccc 371  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  22841975 accttagttttgatgaataaagctcttacacaatcagattctccc 22842019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 298
Target Start/End: Original strand, 23084983 - 23085016
Alignment:
Q  265 ctgttacgtatcagagcacctaagactcatgtga 298  Q
    ||||||||||||||||| ||||||||||||||||    
T  23084983 ctgttacgtatcagagctcctaagactcatgtga 23085016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 2524611 - 2524520
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatc 94  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   | || |||| |||| ||||||||||||||||||||    
T  2524611 ttttttgcataaatcagagtaaaacaact-aaacaggatgatacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatc 2524520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 9239973 - 9240013
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || ||||| |||||||||||||||||||||    
T  9239973 aatcagagtaaaacaccttcaacggaatgttacacttcttt 9240013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 1990500 - 1990170
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||| ||| ||||||    
T  1990500 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagcaaaattactatttatttcaagcatttcataa 1990401  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  1990400 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcactacggcctcaacttaaacaacttaataaaaatccagtctaaa 1990301  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||||||||||||||    
T  1990300 cagtcttcaatataaaagtcataataaatcacgtaacatatggaaaacagtaaaaatccccatcccgttacgtatcagagcacctaagactcatgtgaac 1990201  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
    ||||||||||| |||||||||||||||||||    
T  1990200 agcaactaacaactactactctgcatcacct 1990170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 13027634 - 13027303
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||    
T  13027634 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagcaaaattactatttatttcaatcatttcataa 13027535  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| |||||||||    
T  13027534 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacattatgttggcacaacggcctcaacttaaacaacttaataaaaattcagtctaaa 13027435  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatgg-aaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaa 299  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||||| | |||  |||||||||||||||||||||||||||||| |    
T  13027434 cagtcttcaacataagagtcataataaatcacgtaacatatggaaaaacaataaagatccccatcccattacgtatcagagcacctaagactcatgtgta 13027335  T
Q  300 cagcaactaacagctactactctgcatcacct 331  Q
    |||||||||||||| |||||||||||||||||    
T  13027334 cagcaactaacagcaactactctgcatcacct 13027303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 9 - 331
Target Start/End: Complemental strand, 16326541 - 16326220
Alignment:
Q  9 cataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataa 108  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||||||| ||||||||| | ||    
T  16326541 cataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagcaaaattactatt-atttcaatcatttcataatattaaaa 16326443  T
Q  109 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtcttc 208  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||    
T  16326442 ttaaatctcaatgcagtggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaataacttaataaaaatccagtttaaacagtcttc 16326343  T
Q  209 aacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaacagcaacta 308  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||| ||| || |||||||    
T  16326342 aacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcaagtgtaccgcaacta 16326243  T
Q  309 acagctactactctgcatcacct 331  Q
    ||||| |||||||||||||||||    
T  16326242 acagcaactactctgcatcacct 16326220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 34853822 - 34853493
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||    
T  34853822 ttttttagcataaatcagagtaaaacaccttaaacggaatgttacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataa 34853724  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||||||    
T  34853723 catcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaattcagtctaaa 34853624  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| || ||| ||||| ||||||||||||||||||||||||| ||    
T  34853623 cagtcttcaacataaaagtcatgataaatcacgtaacatatggaaaacaataaagatcttcatcccgttacatatcagagcacctaagactcatgtgtac 34853524  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
     ||||||| |||| |||||||||||||||||    
T  34853523 cgcaactagcagcaactactctgcatcacct 34853493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 36 - 281
Target Start/End: Original strand, 36526859 - 36527104
Alignment:
Q  36 ggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttattt-caatcatctcataatatcataattaaatctcaatgcagcggaaaatat 134  Q
    |||||| |||||||||||||| |||||| |||| |||| ||||||| |||| ||||| | |||||||| || ||||||||||||||||| ||||||||||    
T  36526859 ggaatgctacacttctttcaaacgtaaatatagtaaaattactattcattttcaatcgtttcataatacca-aattaaatctcaatgcatcggaaaatat 36526957  T
Q  135 cttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaacataaaagttataataaatcacgt 234  Q
    |||||||||||||| ||||| ||||||| | |||| || ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  36526958 cttaataaaacatcgtgttggcacaacggcttcaatttgaacaacttaataaaaatcctgtctaaacagtcttcaacataaaagtcataataaatcacgt 36527057  T
Q  235 aacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    ||||||||||||| | ||||||||| | ||| |||||||||||||||    
T  36527058 aacatatggaaaataataaagatccccatcccgttacgtatcagagc 36527104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 3266020 - 3265772
Alignment:
Q  33 aacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttattt-caatcatctcataatatcataattaaatctcaatgcagcggaaaa 131  Q
    ||||||||| || ||||||||||| | |||| |||| |||| ||||||| |||| ||||| | |||||||| || |||||||||||||||||||||||||    
T  3266020 aacggaatgctatacttctttcaaacataaatatagtaaaattactattcattttcaatcgtttcataatacca-aattaaatctcaatgcagcggaaaa 3265922  T
Q  132 tatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaacataaaagttataataaatca 231  Q
    ||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||  |||||||||||||||||||||||||| || ||||||||    
T  3265921 tatcttaataaaacatcatgttggcacaacggcctcaatttgaacaacttaataaaaatcatgtctaaacagtcttcaacataaaagtcatgataaatca 3265822  T
Q  232 cgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||||||||||||||| ||||||||  | ||| |||||||||||||||    
T  3265821 cgtaacatatggaaaacaataaagatctccatcccgttacgtatcagagc 3265772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 21081495 - 21081648
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || |||||||||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||    
T  21081495 ttttttagcataaatcagagtaaaacaccttaaacgaaatgttacacttctttcaaacgtaaatatagcaaaattactatttatttcaatcatttcataa 21081594  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttg 154  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  21081595 tatcaaaattaaatctcaattcagcggaaaatatcttaatgaaatatcatgttg 21081648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 16727518 - 16727795
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| |||||||| |||||| || | || |||| | ||| |||||||||| |||   | || |||| |||| ||||||||||||||||||||||||      
T  16727518 tttttttgcataaattagagtaaaacaactaaaacaggatgctacacttcttacaaatatgaatatagtaaaattactatttatttcaatcatctcatgt 16727617  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| | ||||||||||||||||||||||| || | |||  |||||||||||| ||||| | |||||||||||||||||| || |||||||||| | ||    
T  16727618 catca-atttaaatctcaatgcagcggaaaacatttaaatttaacatcatgttggcacaatggcctcaacttaaacaactt-attaaaatccagtttgaa 16727715  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    | | |||||||||||||| | ||||||||| ||| |||| ||||||||||   || |||||| | |||||||||||||||||    
T  16727716 caaatcttcaacataaaa-tcataataaat-acggaacacatggaaaacaagcaaaatcctcattctgttacgtatcagagc 16727795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 20416466 - 20416651
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   |||| |||| | || ||||||||||||||||||||||||      
T  20416466 tttttttgcataaatcagagta-aacaactaaaacaggatgctacacttctttcaaatataaacatagtagaattactatttatttcaatcatctcatgt 20416564  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaa 188  Q
    ||||| | ||||||||||||||||||||||| || | |||  |||||| |  || ||||||||| ||||||||||||||||| |||||    
T  20416565 tatca-atttaaatctcaatgcagcggaaaacatttaaattcaacatcgtaatggcacaacgacgtcaacttaaacaacttattaaaa 20416651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 76 - 281
Target Start/End: Complemental strand, 15025200 - 15024998
Alignment:
Q  76 actatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaa 175  Q
    |||||||||||||||||||||||   |||| | ||||||||||||||||||||||| || | |||  |||||| ||||| |||||||||||||| |||||    
T  15025200 actatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacgacctcaatttaaa 15025102  T
Q  176 caacttaataaaaatccagtctaaacag-tcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgta 274  Q
    ||||||| ||||| ||||||| ||| |  |||||||||||||    ||||||||| | |||||| ||||||||||   ||||||| | ||| ||||||||    
T  15025101 caacttattaaaa-tccagtccaaataaatcttcaacataaatac-ataataaat-atgtaacacatggaaaacaagcaagatccccatcccgttacgta 15025005  T
Q  275 tcagagc 281  Q
    |||||||    
T  15025004 tcagagc 15024998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 281
Target Start/End: Original strand, 9643651 - 9643855
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    ||||||||||||||||||||||||   |||| | ||||||||||||||||||||||| || | |||  ||| || ||||| ||||||| |||||||||||    
T  9643651 tactatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattcaacttcgtgttggcacaacggcctcaacttaa 9643749  T
Q  175 acaacttaataaaaatccagtctaaac-agtcttcaacataaaagtt-ataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacg 272  Q
    |||||| | | ||||||||||||| || | ||||||||||  ||||| ||||||||| ||| |||| || ||||||| | ||||||| | ||| ||||||    
T  9643750 acaactcatttaaaatccagtctagacaaatcttcaacat--aagttcataataaat-acgcaacacatagaaaacaatcaagatccccttcccgttacg 9643846  T
Q  273 tatcagagc 281  Q
    ||| |||||    
T  9643847 tattagagc 9643855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 12507748 - 12507593
Alignment:
Q  60 taaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacaca 159  Q
    |||| ||||||||| |||||| |||||||||||||||||     || ||||||||||||||||||||||||| || | ||| ||||||| ||||| ||||    
T  12507748 taaatatagcaaaattactatatatttcaatcatctcatgtctaca-aattaaatctcaatgcagcggaaaacatttaaattaaacatcgtgttggcaca 12507650  T
Q  160 acgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaa 216  Q
    ||||||| |||||||| ||||| || ||||||||||||| || | |||||||||||||    
T  12507649 acgaccttaacttaaataactt-attaaaatccagtctagacaaatcttcaacataaa 12507593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 53647850 - 53647651
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| |||||||||| |||| || | || |||| | ||||||||||||||| ||   | || |||| |||| ||||||||||||||||||||  ||      
T  53647850 tttttttgcataaatcaaagtaaaacaact-aaacaggatgttacacttcttttaaatatgaatatagtaaaattactatttatttcaatcatcatatgt 53647752  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| |||||||||||| | || | || ||||| |||||| ||||||| ||||||||||||||||||||| |||||||| | ||||    
T  53647751 catca-aattaaatctcattgcagcggaaaacaactaagtacaacattatgttggcacaacggcctcaacttaaacaacttaattaaaatccaatttaaa 53647653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 249
Target Start/End: Complemental strand, 22308613 - 22308369
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   | || |||| |||| ||||||||||| ||||||||  ||       
T  22308613 ttttttgcataaatcagagtaaaacaact-aaacaggatgctacacttctttcaaatatgaatatagtaaaattactatttattacaatcatcatatgtc 22308515  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| |||||||||||| ||||| |||||| | || | |  |||||||||||  ||||||| ||||||||||||||||||||| |||||||||| |||||    
T  22308514 atca-aattaaatctcattgcagtggaaaacaactaagttcaacatcatgttagcacaacggcctcaacttaaacaacttaattaaaatccagtttaaac 22308416  T
Q  202 -agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
     |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  22308415 aaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 22308369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 14440127 - 14440372
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||     || |||| |||| ||| ||||||||||||||||  ||      
T  14440127 tttttttgcataaatcagagtaaaacaact-aaacaggatgatacacttctttcaaataagaatatagtaaaattacaatttatttcaatcatcatatgt 14440225  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| || ||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| | |||||||| ||||    
T  14440226 catca-aattaaatctcattgtagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattataatccagtttaaa 14440324  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  14440325 caaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 14440372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 10833314 - 10833265
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10833314 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 10833265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 10952736 - 10952687
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10952736 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 10952687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 10953665 - 10953616
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10953665 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 10953616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 281
Target Start/End: Complemental strand, 12513774 - 12513566
Alignment:
Q  65 atagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgac 164  Q
    ||||||||| |||||| |||||||||||||||||   |||| ||||||||||||||||||||||||| || | ||| ||||||  ||||| ||||| |||    
T  12513774 atagcaaaattactatatatttcaatcatctcatgtcatca-aattaaatctcaatgcagcggaaaacatttaaattaaacattgtgttggcacaatgac 12513676  T
Q  165 ctcaacttaaacaacttaataaaaatccagtctaaacag-tcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgt 263  Q
    ||     |||| |||||| ||||| ||||||||| |||  |||||||||||||  | | |||||| ||||||||| ||||||||||  |||||||| | |    
T  12513675 ct-----taaaaaacttattaaaa-tccagtctagacaaatcttcaacataaat-tcacaataaa-cacgtaacacatggaaaacagcaaagatccccat 12513584  T
Q  264 cctgttacgtatcagagc 281  Q
    |  |||||||||||||||    
T  12513583 ctcgttacgtatcagagc 12513566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 18893728 - 18893777
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18893728 accttagttttgatgaacaaactcttacacaatgagattctccccctttg 18893777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 249
Target Start/End: Original strand, 19574092 - 19574273
Alignment:
Q  65 atagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgac 164  Q
    |||| |||| ||||||| ||||||||||||||||   |||| | ||||||||||||||||||||||| |  | |||  |||||| |  || |||||||||    
T  19574092 atagtaaaattactattaatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacaattaaattcaacatcgtaatggcacaacgac 19574190  T
Q  165 ctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    || |||||||||||||| || |||||| | |||| || | |||||||||| ||| |||||||||| ||||||||| ||||||||||    
T  19574191 cttaacttaaacaactt-attaaaatctaatctagacaaatcttcaacat-aaatttataataaa-cacgtaacacatggaaaaca 19574273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 281
Target Start/End: Complemental strand, 8493132 - 8492900
Alignment:
Q  46 acttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaac 145  Q
    |||||||||||   |||| |||| ||||  |||||||||||||||||||||||   |||| | |||||| | |||||||||||||| || | |||  | |    
T  8493132 acttctttcaagtataaacatagtaaaatgactatttatttcaatcatctcatgtgatca-atttaaattttaatgcagcggaaaacatttaaattcatc 8493034  T
Q  146 atcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatgga 244  Q
    ||  ||||| ||||| |  ||||||||||||||||| || ||||| || | || || | |||||||||||||| | ||||||||| |||||||| |||||    
T  8493033 attgtgttggcacaatggtctcaacttaaacaactt-attaaaattcaatttagacaactcttcaacataaaa-tcataataaat-acgtaacacatgga 8492937  T
Q  245 aaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||   ||||||  | |||||||||||||||||||    
T  8492936 aaacaaacaagatctccatcctgttacgtatcagagc 8492900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 35066538 - 35066296
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||| | ||||||||||||   |||| |||| |||| |||||||| ||||||||| |||||      
T  35066538 tttttttgcataaatcagagta-aacaactaaaacaggatgatgcacttctttcaaatataaatatagtaaaattactatttgtttcaatcaactcatgt 35066440  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| | ||||||||||||||||| ||||| |  ||||| ||||| | |  |||||||| | ||||||||||||  |||| || |||||||| | || |    
T  35066439 catca-atttaaatctcaatgcagcagaaaaca--ttaattaaacaacgtaatgacacaatggcctcaacttaaatgactt-attaaaatccactataga 35066344  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | | |||||||||| ||| | ||||||||| |||||||| ||||||||||    
T  35066343 caaatcttcaacat-aaattcataataaat-acgtaacacatggaaaaca 35066296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 3801224 - 3801264
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  3801224 aatcagagtaaaacaccttaaacggaatgttacacttcttt 3801264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 16840927 - 16840887
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  16840927 aatcagagtaaaacaccttaaacggaatgttacacttcttt 16840887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 20250657 - 20250617
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  20250657 aatcagagtaaaacaccttaaacggaatgttacacttcttt 20250617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 51609103 - 51609063
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  51609103 aatcagagtaaaacaccttaaacggaatgttacacttcttt 51609063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 42328260 - 42328014
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||| ||||||||||  || | |||| ||||||||| |||||| ||||||||||||   |       
T  42328260 tttttttgcataaatcagagtaaaacaact-aaacaggatgctacacttcttataatcataaatatagcaaaattactatatatttcaatcattataagt 42328162  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatctta-ataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaa 199  Q
     |||| |||||||||||| |||||||||||| | || |  | || |||| ||||| |||| |  ||||| ||||||||||| | | ||||| || | |||    
T  42328161 catca-aattaaatctcattgcagcggaaaacaactaagttcaatcatcgtgttggcacagcagcctcagcttaaacaactcatttaaaattcaatttaa 42328063  T
Q  200 ac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    || | |||||||||||||| | ||||||||| |||||||| ||||||||||    
T  42328062 acaattcttcaacataaaa-tcataataaat-acgtaacacatggaaaaca 42328014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 10556258 - 10556298
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || ||||||||| |||||||||||||||||    
T  10556258 aatcagagtaaaacaccttaaacagaatgttacacttcttt 10556298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 11911924 - 11911964
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||| ||||||||||||    
T  11911924 aatcagagtaaaacaccttaaacggaatattacacttcttt 11911964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 24341545 - 24341509
Alignment:
Q  17 agagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||| || |||||||||||||||||||||||||||    
T  24341545 agagtaaaacaccttaaacggaatgttacacttcttt 24341509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 29546828 - 29546788
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || ||||||||| |||||||||||||||||    
T  29546828 aatcagagtaaaacaccttaaacagaatgttacacttcttt 29546788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 38313670 - 38313630
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||| ||||||    
T  38313670 aatcagagtaaaacaccttaaacggaatgttacatttcttt 38313630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 243; Significance: 1e-134; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 13762975 - 13763305
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    ||||||||||||||| |||||| || |||||||||| |||| |||||||||||||| |||||| |||| |||| ||||||||||||||||||| ||||||    
T  13762975 ttttttagcataaattagagtaaaacaccttaaacgaaatggtacacttctttcaaacgtaaatatagtaaaattactatttatttcaatcatttcataa 13763074  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||| | ||||||||||  ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  13763075 tatcaaaattaaatctcaatgcagtgaaaaatatcttggtaaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaa 13763174  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  13763175 cagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcctgttacgtatcagagcacctaagactcatgtgaac 13763274  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
    | |||||||||||||||||||||||||||||    
T  13763275 aacaactaacagctactactctgcatcacct 13763305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 29418088 - 29417759
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    ||||||||||||||| |||||| || ||||||||||||||| |||||||||||||| | |||| ||||||||| ||||||| ||||||||||| ||||||    
T  29418088 ttttttagcataaataagagtaaaacaccttaaacggaatgctacacttctttcaaacataaatatagcaaaattactatt-atttcaatcatttcataa 29417990  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||||| |||||||||    
T  29417989 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcgacttaaacaacttaataaaaattcagtctaaa 29417890  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||| ||    
T  29417889 cagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagattctcatcccgttacgtatcagagcacctaagactcatgtgtac 29417790  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
     |||||||||| | |||||||||||||||||    
T  29417789 cgcaactaacaacaactactctgcatcacct 29417759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 29849689 - 29849359
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || |||||||| |||||| |||| |||||| || |||||| ||||||||| ||||||||||||||||||| ||||||    
T  29849689 ttttttagcataaatcagagtaaaacaccttaaaaggaatgctacaattctttaaaacgtaaatatagcaaaattactatttatttcaatcatttcataa 29849590  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||    
T  29849589 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtttaaa 29849490  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| || ||| |||| |||| |||||||||||||||| ||| |||    
T  29849489 cagtcttcaacataaaagtcataacaaatcacgtaacatatggaaaacaataaagatcttcatcccgttatgtattagagcacctaagactcgtgtaaac 29849390  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
     |||||||| |||||||||||||||||||||    
T  29849389 tgcaactaatagctactactctgcatcacct 29849359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 5112436 - 5112203
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaa 112  Q
    |||||||||| ||  ||||||||||||||||||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||||||| ||||||    
T  5112436 aatcagagtaaaacgccttaaacggaatgttacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataatatcaaaattaa 5112338  T
Q  113 atctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaaca 212  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5112337 atctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaattcagtctaaacagtcttcaaca 5112238  T
Q  213 taaaagttataataaatcacgtaacatatggaaaa 247  Q
    ||||||| ||| |||||||||||||||||||||||    
T  5112237 taaaagtcatagtaaatcacgtaacatatggaaaa 5112203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 202
Target Start/End: Complemental strand, 20412740 - 20412542
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   | || |||| |||| ||||||||||||||||||||  ||       
T  20412740 ttttttgcataaatcagagtaaaacaact-aaacaggatgctacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgtc 20412642  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| |||||||||||| |||||| ||||| | || | |  |||||||||||| ||||||| ||| ||||||||||||||||| |||||||||| |||||    
T  20412641 atca-aattaaatctcattgcagcagaaaacaactaagttcaacatcatgttggcacaacggccttaacttaaacaacttaattaaaatccagtttaaac 20412543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 29415562 - 29415513
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29415562 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 29415513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 24551443 - 24551229
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||||||||||||||  || | |||| ||||||||| |||||| |||||||||||||  ||      
T  24551443 tttttttgcataaatcagagtaaaacaact-aaacaggatgttacacttcttataatcataaatatagcaaaattactatatatttcaatcatcatatgt 24551345  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||| | |||||||||||| | || | |  |||||| ||||| ||||| |  ||||||||||| |||||| ||| |||||||| ||||    
T  24551344 catca-aattaaatcttattgcagcggaaaacaactaagttcaacatcgtgttggcacaatggtctcaacttaaataacttattaataatccagtttaaa 24551246  T
Q  201 c-agtcttcaacataaa 216  Q
    | | |||||||||||||    
T  24551245 caaatcttcaacataaa 24551229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 202
Target Start/End: Complemental strand, 23018021 - 23017885
Alignment:
Q  65 atagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgac 164  Q
    |||| |||| ||||||||||||||||||||  ||   |||| |||||||||||| |||||| ||||| | || | |  |||||||||||| ||||| | |    
T  23018021 atagtaaaattactatttatttcaatcatcatatgtcatca-aattaaatctcattgcagctgaaaacaactaagttcaacatcatgttggcacaatggc 23017923  T
Q  165 ctcaacttaaacaacttaataaaaatccagtctaaaca 202  Q
    | |||||||||||||||||| |||||||| | ||||||    
T  23017922 cgcaacttaaacaacttaattaaaatccaatttaaaca 23017885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 31736536 - 31736393
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    ||||||||||| ||  ||||  |||| |||| |||||||||||||||||||||| |   |||| | |||||||||| |||||||||||| || | ||| |    
T  31736536 tacacttctttaaaatgtaattatagtaaaattactatttatttcaatcatctcctgtcatca-atttaaatctcattgcagcggaaaacat-taaatta 31736439  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaa 188  Q
    || ||| |  |||||||||| ||||||||||||||||||| |||||    
T  31736438 aatatcgtaatgacacaacggcctcaacttaaacaacttattaaaa 31736393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 4475049 - 4475089
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  4475049 aatcagagtaaaacaccttaaacggaatgttacacttcttt 4475089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 10989068 - 10989028
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  10989068 aatcagagtaaaacaccttaaacggaatgttacacttcttt 10989028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 15815949 - 15815909
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  15815949 aatcagagtaaaacaccttaaacggaatgttacacttcttt 15815909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 21321105 - 21321145
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  21321105 aatcagagtaaaacaccttaaacggaatgttacacttcttt 21321145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 27222080 - 27222120
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  27222080 aatcagagtaaaacaccttaaacggaatgttacacttcttt 27222120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 23621921 - 23621879
Alignment:
Q  256 atcctcgtcctgttacgtatcagagcacctaagactcatgtga 298  Q
    |||||| ||||||||||||||||||| |||||||| |||||||    
T  23621921 atcctcatcctgttacgtatcagagctcctaagacacatgtga 23621879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 1583932 - 1583965
Alignment:
Q  298 aacagcaactaacagctactactctgcatcacct 331  Q
    |||||||||||||||||||||||||| |||||||    
T  1583932 aacagcaactaacagctactactctggatcacct 1583965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 1253654 - 1253690
Alignment:
Q  17 agagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||| || |||||||||||||||||||||||||||    
T  1253654 agagtaaaacaccttaaacggaatgttacacttcttt 1253690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 295
Target Start/End: Complemental strand, 3852759 - 3852727
Alignment:
Q  263 tcctgttacgtatcagagcacctaagactcatg 295  Q
    |||||||||||||||||||||||||||| ||||    
T  3852759 tcctgttacgtatcagagcacctaagacacatg 3852727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 18857122 - 18857086
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacactt 49  Q
    |||||||||| || |||||||||||||||||||||||    
T  18857122 aatcagagtaaaacaccttaaacggaatgttacactt 18857086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 25737390 - 25737430
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||| ||||||||||||||||    
T  25737390 aatcagagtaaaacaccttaaacgaaatgttacacttcttt 25737430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 34298354 - 34298314
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||| ||||||||||||    
T  34298354 aatcagagtaaaacaccttaaacggaatattacacttcttt 34298314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 239; Significance: 1e-132; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 15 - 337
Target Start/End: Original strand, 391084 - 391406
Alignment:
Q  15 tcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaat 114  Q
    |||||||| || ||||||||||||||| |||||||||||||| |||||| ||| ||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  391084 tcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatataccaaaattactatttatttcaatcatttcataatatcaaaattaaat 391183  T
Q  115 ctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaacata 214  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  391184 ctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaacata 391283  T
Q  215 aaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaacagcaactaacagct 314  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||| | ||| |||| |||| ||||||||||||||||||||||||||||||||||| ||    
T  391284 aaagtcataataaatctcgtaacatatggaaaacaataaagatccccatcccgttaagtattagagcacctaagactcatgtgaacagcaactaacaact 391383  T
Q  315 actactctgcatcaccttagttt 337  Q
    ||| |||||||||||||||||||    
T  391384 actgctctgcatcaccttagttt 391406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 31179 - 31320
Alignment:
Q  107 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 205  Q
    |||||||||||| |||||||||||| |  | | |  |||||||||||| ||||| | ||||||||||||||||||||| | ||||||||  |||| |  |    
T  31179 aattaaatctcattgcagcggaaaacaattaagttcaacatcatgttggcacaatggcctcaacttaaacaacttaattataatccagttgaaacaaaac 31278  T
Q  206 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  31279 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 31320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 36486 - 36627
Alignment:
Q  107 aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtc 205  Q
    |||||||||||| |||||||||||| |  | | |  |||||||||||| ||||| | ||||||||||||||||||||| | ||||||||  |||| |  |    
T  36486 aattaaatctcattgcagcggaaaacaattaagttcaacatcatgttggcacaatggcctcaacttaaacaacttaattataatccagttgaaacaaaac 36585  T
Q  206 ttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    |||||||||||| | || |||||| |||||||| ||||||||||    
T  36586 ttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 36627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 22468829 - 22469159
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || | |||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||| ||||||    
T  22468829 ttttttagcataaatcagagtaaaacatcttaaacggaatgttacacttctttcaaacataaatatagcaaaattactatttatttcaatcatttcataa 22468928  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  22468929 tatcaaaattaaatctcaatgcagcggaaaatatctcaacaaaacatcatgttggcacaacggcctcaacttaaacaacttaataaagatccagtctaaa 22469028  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||   ||| ||||||||||||||||||||||||||||||||||    
T  22469029 cagtcttcaacataaaagtcataatgaatcacataacatatggaaaacaataaagatcccaatcccgttacgtatcagagcacctaagactcatgtgaac 22469128  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
    ||||||||||||| |||||||||||||||||    
T  22469129 agcaactaacagcaactactctgcatcacct 22469159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 23537344 - 23537673
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||    
T  23537344 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataa 23537442  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  23537443 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaataacttaataaaaatccagtctaaa 23537542  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||| ||    
T  23537543 cagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcatgtgtac 23537642  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
     |||||||||||| |||||||||||||||||    
T  23537643 cgcaactaacagcaactactctgcatcacct 23537673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 22359227 - 22358919
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||| | |||||| ||||||||| ||||||||||||||||||| ||||||    
T  22359227 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcgaacgtaaatatagcaaaattactatttatttcaatcatttcataa 22359128  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||         |||||||||||||||||||||    
T  22359127 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaac---------ttaataaaaatccagtctaaa 22359037  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||||||||||||||| |||| ||    
T  22359036 tagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcgtgtgtac 22358937  T
Q  301 agcaactaacagctacta 318  Q
    | ||||||||||| ||||    
T  22358936 aacaactaacagcaacta 22358919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 6555186 - 6555421
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| || ||||||||||| |||||| |||| |||| ||||||||||||||||||| ||||||    
T  6555186 ttttttagcataaatcagagtaaaacaccttaaacggaatgctatacttctttcaaacgtaaatatagaaaaactactatttatttcaatcatttcataa 6555285  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  6555286 tatcaaaattaaatctcaatgcagcggaaaatatcttaatgaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaa 6555385  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaa 236  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6555386 cagtcttcaacataaaagtcataataaatcacgtaa 6555421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 6554585 - 6554820
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| || ||||||||||| |||||| |||| |||| ||||||||||||||||||| ||||||    
T  6554585 ttttttagcataaatcagagtaaaacaccttaaacggaatgctatacttctttcaaacgtaaatatagaaaaattactatttatttcaatcatttcataa 6554684  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  6554685 tatcaaaattaaatctcaatgcagcggaaaatatcttaatgaaacatcatgtttgcacaacggcctcaacttaaacaacttaataaaaatccagtctaaa 6554784  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaa 236  Q
    |||||||| |||||||||| ||||||||||||||||    
T  6554785 cagtcttcgacataaaagtcataataaatcacgtaa 6554820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 10815511 - 10815715
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||| ||||||||||||||||| || ||||||||||||||| |||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||    
T  10815511 ttttatagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataa 10815609  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  10815610 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccagtctaaa 10815709  T
Q  201 cagtct 206  Q
    ||||||    
T  10815710 cagtct 10815715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 23540494 - 23540683
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||    
T  23540494 ttttttagcataaatcagagtaaaacaccttaaacggaatgttacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataa 23540592  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatc 191  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||    
T  23540593 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaataacttaataaaaatc 23540683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 282
Target Start/End: Complemental strand, 25251599 - 25251323
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   |||| |||| |||| ||||||||||||||||||||||||       
T  25251599 ttttttgcataaatcagagta-aacaactaaaaccggatgctacacttctttcaaatataaacatagtaaaattactatttatttcaatcatctcatgtc 25251501  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| | |||||||||||||||||  |||| || | |||  |||||| ||||| ||||| | |||||||||||||||| | || |||||||||| || ||    
T  25251500 atca-atttaaatctcaatgcagcaaaaaacatttaaattcaacatcgtgttggcacaatggcctcaacttaaacaacat-attaaaatccagtttagac 25251403  T
Q  202 -agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagca 282  Q
     | |||||||||||||| | ||||||||| |||||||| ||||||||||   ||||||| | ||| ||||||||||||||||    
T  25251402 aaatcttcaacataaaa-tcataataaat-acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagca 25251323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 282
Target Start/End: Complemental strand, 25315384 - 25315108
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   |||| |||| |||| ||||||||||||||||||||||||       
T  25315384 ttttttgcataaatcagagta-aacaactaaaaccggatgctacacttctttcaaatataaacatagtaaaattactatttatttcaatcatctcatgtc 25315286  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| | |||||||||||||||||  |||| || | |||  |||||| ||||| ||||| | |||||||||||||||| | || |||||||||| || ||    
T  25315285 atca-atttaaatctcaatgcagcaaaaaacatttaaattcaacatcgtgttggcacaatggcctcaacttaaacaacat-attaaaatccagtttagac 25315188  T
Q  202 -agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagca 282  Q
     | |||||||||||||| | ||||||||| |||||||| ||||||||||   ||||||| | ||| ||||||||||||||||    
T  25315187 aaatcttcaacataaaa-tcataataaat-acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagca 25315108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 26760502 - 26760747
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| | ||||||||||||| || | || |||| ||||| ||||||||||||||   | || |||| |||| |||||||||||||||||||| |||      
T  26760502 tttttttgtataaatcagagtaaaacaact-aaacagaatgctacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcacatgt 26760600  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| |||||| ||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||    
T  26760601 catca-aattaaatctcattgcagcagaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaa 26760699  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  26760700 caaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 26760747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 281
Target Start/End: Original strand, 16226193 - 16226429
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    ||||||||||| ||   |||| |||| |||| ||||||||||||||||||| ||||   |||| | |||||||| |||||||||||||| || | |||      
T  16226193 tacacttcttttaaatataaatatagtaaaattactatttatttcaatcatatcatgtcatca-atttaaatcttaatgcagcggaaaacatttaaattc 16226291  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 241  Q
    ||| || ||||| ||||||| ||||||||||||||||||| | ||||||||||||| || | |||||||||| ||| | ||||||||| ||  |||| ||    
T  16226292 aacttcgtgttggcacaacggcctcaacttaaacaacttatttaaaatccagtctagacaaatcttcaacat-aaattcataataaat-acacaacacat 16226389  T
Q  242 ggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||||| | ||||||  | ||| |||||||||||||||    
T  16226390 ggaaaacaatcaagatctccttcccgttacgtatcagagc 16226429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 23539812 - 23539861
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23539812 accttagttttgatgaacaatctcttacacaatcagattctccccctttg 23539861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 22358929 - 22358896
Alignment:
Q  298 aacagcaactaacagctactactctgcatcacct 331  Q
    ||||||||||||||||||||||||||||||||||    
T  22358929 aacagcaactaacagctactactctgcatcacct 22358896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 22338266 - 22338306
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  22338266 aatcagagtaaaacaccttaaacggaatgttacacttcttt 22338306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 22748509 - 22748549
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  22748509 aatcagagtaaaacaccttaaacggaatgttacacttcttt 22748549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 23114228 - 23114188
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  23114228 aatcagagtaaaacaccttaaacggaatgttacacttcttt 23114188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 28372906 - 28372866
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  28372906 aatcagagtaaaacaccttaaacggaatgttacacttcttt 28372866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 37806258 - 37806218
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  37806258 aatcagagtaaaacaccttaaacggaatgttacacttcttt 37806218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 10815714 - 10815761
Alignment:
Q  284 ctaagactcatgtgaacagcaactaacagctactactctgcatcacct 331  Q
    |||||||||||||| ||  ||||||||||| |||||||||||||||||    
T  10815714 ctaagactcatgtgtaccacaactaacagcaactactctgcatcacct 10815761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 298
Target Start/End: Complemental strand, 21906205 - 21906174
Alignment:
Q  267 gttacgtatcagagcacctaagactcatgtga 298  Q
    ||||||||||||||||||||||||||||||||    
T  21906205 gttacgtatcagagcacctaagactcatgtga 21906174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 22334736 - 22334776
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  22334736 aatcagagtaaaaccccttaaacggaatgttacacttcttt 22334776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 24278137 - 24278105
Alignment:
Q  299 acagcaactaacagctactactctgcatcacct 331  Q
    ||||||||||||||||||||||||| |||||||    
T  24278137 acagcaactaacagctactactctggatcacct 24278105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Original strand, 24384076 - 24384108
Alignment:
Q  299 acagcaactaacagctactactctgcatcacct 331  Q
    ||||||||||||||||||||||||| |||||||    
T  24384076 acagcaactaacagctactactctggatcacct 24384108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 36448159 - 36448199
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||| ||||||||||||    
T  36448159 aatcagagtaaaacaccttaaacggaatattacacttcttt 36448199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 4832776 - 4832447
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||    
T  4832776 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataa 4832678  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  4832677 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccagtctaaa 4832578  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||| ||    
T  4832577 cagtcttcaacataaaagtcatagtaaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcatgtgtac 4832478  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
     |||||||||||| |||||||||||||||||    
T  4832477 cgcaactaacagcaactactctgcatcacct 4832447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 4829481 - 4829152
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||    
T  4829481 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataa 4829383  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||| |||||||||    
T  4829382 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacagcctcaacttaaacaacttaataaaaattcagtctaaa 4829283  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||| ||    
T  4829282 cagtcttcaacataaaagtcatagtaaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcatgtgtac 4829183  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
     |||||||||||| |||||||||||||||||    
T  4829182 cgcaactaacagcaactactctgcatcacct 4829152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 4836071 - 4835742
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||    
T  4836071 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataa 4835973  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  4835972 tatctaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccagtctaaa 4835873  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    || |||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||| ||    
T  4835872 caatcttcaacataaaagtcatagtaaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcatgtgtac 4835773  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
     |||||||||||| |||||||||||||||||    
T  4835772 cgcaactaacagcaactactctgcatcacct 4835742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 2 - 331
Target Start/End: Original strand, 15988838 - 15989167
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||  ||||||||| || |||||||||||||||| |||| ||    
T  15988838 tttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaagtatagcaaaattattatttatttcaatcatttcatgat 15988937  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||| ||||||||||    
T  15988938 atcaaaattaaatctcaatgcagcggaaaatattttaataaaacatcatgttggcacaacggcctcaacttaaataacttaataaaaattcagtctaaac 15989037  T
Q  202 agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaaca 301  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||||| |||||||||||||| ||     
T  15989038 agtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatcaacatcccgttacgtatcagagcatctaagactcatgtgtacc 15989137  T
Q  302 gcaactaacagctactactctgcatcacct 331  Q
    | |||||||||| |||||||||||||||||    
T  15989138 gtaactaacagcaactactctgcatcacct 15989167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 13 - 281
Target Start/End: Original strand, 33184864 - 33185131
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaa 112  Q
    |||||||||| || ||||||||||||||| |||||||||||||| |||||| |||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  33184864 aatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagtaaaattactatttatttcaatcatctcataatatca-aattaa 33184962  T
Q  113 atctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaaca 212  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  33184963 atctcaatgcagcggaaaatatctaaataaaacatcatgttggcacaacggcttcaacttaaacaacttaatgaaaatccagtctaaacagtcttcaaca 33185062  T
Q  213 taaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||||  | ||| |||| ||||||||||    
T  33185063 taaaagtcataataaatcacgtaaaatatggaaaacaataaagatcaccatcccgttatgtatcagagc 33185131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 13 - 281
Target Start/End: Original strand, 14184033 - 14184299
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttattt-caatcatctcataatatcataatta 111  Q
    |||||||||| || ||||||||||||||| |||||||||||||| |||||| |||| |||| ||||||| |||| ||||| | | |||||| || |||||    
T  14184033 aatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagtaaaattactattcattttcaatcgttttataatacca-aatta 14184131  T
Q  112 aatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacag-tcttcaa 210  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||| || ||||||||  ||||| || |||||||    
T  14184132 aatctcaatgcaacggaaaatatcttaataaaacatcatgttggcacaacggcttcaactt-aacaactt-attaaaatccaaactaaatagttcttcaa 14184229  T
Q  211 cataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    ||||||| | |||  || | |||||||||||||||||||   ||||||| | ||| |||||||||||||||    
T  14184230 cataaaaatcatagcaagt-acgtaacatatggaaaacaagtaagatccccatcccgttacgtatcagagc 14184299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 13 - 281
Target Start/End: Original strand, 14187572 - 14187838
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaa-tcatctcataatatcataatta 111  Q
    |||||||||| || ||||||||| ||||| |||||||||||||| |||||| |||| |||| ||||||| |||| || || | | ||||||||| |||||    
T  14187572 aatcagagtaaaacaccttaaactgaatgctacacttctttcaaacgtaaatatagtaaaattactattcattttaaatcgttttataatatca-aatta 14187670  T
Q  112 aatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacag-tcttcaa 210  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||| | ||||||| |||||||| || ||||||||  ||||| || |||||||    
T  14187671 aatctcaatgcagcggaaaatatcttaataaaacatcatgttggcaaaacggcttcaactt-aacaactt-attaaaatccaaactaaatagttcttcaa 14187768  T
Q  211 cataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    ||||||| | |||  || | |||||||||||||||||||   ||||||  | ||| |||||||||||||||    
T  14187769 cataaaaatcatagcaagt-acgtaacatatggaaaacaagtaagatctccatcccgttacgtatcagagc 14187838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 282
Target Start/End: Original strand, 15607743 - 15607912
Alignment:
Q  111 aaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttca 209  Q
    ||||||||||||||||||||| || | |||  |||||| ||||| ||||||  ||||||||||||||||||||| |||||||||| ||||| | ||||||    
T  15607743 aaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaaccgcctcaacttaaacaacttaattaaaatccagtttaaacaaatcttca 15607842  T
Q  210 acataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagca 282  Q
    |||||||| | || |||||| |||||||| ||||||||||  ||| |||| | ||| ||||||||||||||||    
T  15607843 acataaaa-tcatgataaat-acgtaacacatggaaaacaacaaa-atccccatcccgttacgtatcagagca 15607912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 249
Target Start/End: Complemental strand, 10358360 - 10358122
Alignment:
Q  8 gcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcata 107  Q
    ||||||||||||||| || | || |||| | ||| ||||||||||||||   | || |||| |||| ||||||||||||||||||||  ||   |||| |    
T  10358360 gcataaatcagagtaaaacaact-aaacaggatgctacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgtcatca-a 10358263  T
Q  108 attaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtct 206  Q
    ||||||||||| |||||||||||| |  | | |  |||||||||||| ||||||| |||||| |||||||||||||| |||||||||| ||||| |  ||    
T  10358262 attaaatctcattgcagcggaaaacaattaagttcaacatcatgttggcacaacggcctcaaattaaacaacttaattaaaatccagtttaaacaaaact 10358163  T
Q  207 tcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    ||||||||||| | || |||||| |||||||| ||||||||||    
T  10358162 tcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 10358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 32467842 - 32467735
Alignment:
Q  111 aaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa-cagtcttca 209  Q
    ||||||||||||||||||||| || | |||  || ||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||  | ||||||    
T  32467842 aaatctcaatgcagcggaaaacatttaaattcaatatcatgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaataaatcttca 32467743  T
Q  210 acataaaa 217  Q
    ||||||||    
T  32467742 acataaaa 32467735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 15747562 - 15747513
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15747562 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 15747513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 24046485 - 24046436
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24046485 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 24046436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 21060873 - 21061066
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || |  | |||| | |||||||||||||||||| | |||| |||| |||| | ||||||||||||||||||||||      
T  21060873 tttttttgcataaatcagagta-aacatttaaaacaggatgttacacttctttcaaacataaatatagtaaaattgctatttatttcaatcatctcatgt 21060971  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtct 197  Q
     |||| | ||||||||||||||| |||||||  | | | | |||||||    || |||||| ||||||||||||||||||| || ||||||||||||    
T  21060972 catca-atttaaatctcaatgcaacggaaaacttttaatttaaacatcggaatggcacaacaacctcaacttaaacaactt-attaaaatccagtct 21061066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 4830163 - 4830114
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4830163 accttagttttgatgaacaatctcttacacaatcagattctccccctttg 4830114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 4833458 - 4833409
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4833458 accttagttttgatgaacaatctcttacacaatcagattctccccctttg 4833409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 282
Target Start/End: Complemental strand, 16027900 - 16027697
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    ||||||||||||||||||||||||   |||| | |||||||||| |||||||||||| || | | | ||||||  |  || ||||||| |||||||||||    
T  16027900 tactatttatttcaatcatctcatgtcatca-acttaaatctcattgcagcggaaaacat-taagttaaacattgtaatggcacaacggcctcaacttaa 16027803  T
Q  175 acaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgt 273  Q
    ||||||| || |||||||||||||  | | |||||||||||||| | | || |||| |||||||| ||||||||||   ||||||| | ||| |||||||    
T  16027802 acaactt-attaaaatccagtctaggcaaatcttcaacataaaa-tcaaaacaaat-acgtaacacatggaaaacaagtaagatccccatcccgttacgt 16027706  T
Q  274 atcagagca 282  Q
    |||||||||    
T  16027705 atcagagca 16027697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 19961 - 20112
Alignment:
Q  9 cataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataa 108  Q
    |||||||||||||| |||| || |||| | ||| ||||||||||||||   |||| |||| |||  |||||||||||||| |||||||||   |||| |     
T  19961 cataaatcagagta-aataactaaaacaggatgctacacttctttcaaatataaatatagtaaagttactatttatttcattcatctcatgtcatca-at 20058  T
Q  109 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacg 162  Q
    ||||||||||||||||||||||| || | |||  |||||| ||||| |||||||    
T  20059 ttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacg 20112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 51992238 - 51992295
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    ||||||||||  |||| |||| ||||||||| |||||| |||||||||||||||||||    
T  51992238 tacacttcttataaccataaatatagcaaaattactatatatttcaatcatctcataa 51992295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 2754472 - 2754512
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  2754472 aatcagagtaaaacaccttaaacggaatgttacacttcttt 2754512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 18210858 - 18210898
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  18210858 aatcagagtaaaacaccttaaacggaatgttacacttcttt 18210898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 30145124 - 30145164
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  30145124 aatcagagtaaaacaccttaaacggaatgttacacttcttt 30145164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 43259033 - 43258993
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  43259033 aatcagagtaaaacaccttaaacggaatgttacacttcttt 43258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 33685347 - 33685314
Alignment:
Q  298 aacagcaactaacagctactactctgcatcacct 331  Q
    |||||||||||||||||||||||||| |||||||    
T  33685347 aacagcaactaacagctactactctggatcacct 33685314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Original strand, 3336651 - 3336683
Alignment:
Q  299 acagcaactaacagctactactctgcatcacct 331  Q
    ||||||||||||||||||||||||| |||||||    
T  3336651 acagcaactaacagctactactctggatcacct 3336683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 14046742 - 14046782
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||| ||||||||||    
T  14046742 aatcagagtaaaacaccttaaacggaatgtcacacttcttt 14046782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 24049295 - 24049255
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || ||||||||||||||||||||| |||||    
T  24049295 aatcagagtaaaacaccttaaacggaatgttacacctcttt 24049255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 48742248 - 48742575
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||  |||||||||||||| |||||| ||||||||| |||||||||||| |||||| ||||||    
T  48742248 ttttttagcataaatcagagtaaaacaccttaaacggaatactacacttctttcaaacgtaaatatagcaaaattactatttattttaatcatttcataa 48742347  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||| |||| ||||    
T  48742348 tattaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaaattagtaaaaattcagtataaa 48742447  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  | ||  ||||||||||||||||||||||||||||||| ||    
T  48742448 tagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatctccatctcgttacgtatcagagcacctaagactcatgtgtac 48742547  T
Q  301 agcaactaacagctactactctgcatca 328  Q
    | ||||||||||||||||||||||||||    
T  48742548 aacaactaacagctactactctgcatca 48742575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 14190233 - 14189945
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||| ||||||    
T  14190233 ttttttagcataaatcagagtaaaacaccttaaacggaatgttacacttctttcaaaagtaaatatagcaaaattactatttatttcaatcatttcataa 14190134  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  14190133 tatcaaaattaaatctcaatgcagaggaaaatatcttaatagaacatcatgttgccacaacggcctcaacttaaacaacttaataaaaatccagtctaaa 14190034  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaaga 289  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | | ||| |||||||||||||||||||||||    
T  14190033 cagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagattcccatcccgttacgtatcagagcacctaaga 14189945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 15212486 - 15212774
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||| ||||| ||||||||||||||||||| ||||||    
T  15212486 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatataacaaaattactatttatttcaatcatttcataa 15212585  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||||||||||    
T  15212586 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcagaacggcctcaacttaaactacttaataaaaatccagtctaaa 15212685  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagac 290  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||| ||||||    
T  15212686 cagtcttcaacataagagtcataat-aatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagcacttaagac 15212774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 13254314 - 13254598
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||| ||| |||||| ||||||||| ||||||| ||||||||||| ||||||    
T  13254314 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctt-caaacgtaaatatagcaaaattactatt-atttcaatcatttcataa 13254411  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  13254412 tattaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccagtctaaa 13254511  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaa 287  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||| ||||||||||||||||    
T  13254512 cagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttatgtatcagagcacctaa 13254598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 14192990 - 14192781
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||| ||||||||||| |||||||    
T  14192990 tttttagcataaatcagagtaaaacaccttaaacggaatgttacacttctttcaaatgtaaatatagcaaaattactattaatttcaatcatttcataat 14192891  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| |||| |||||||||| |||| |||||||||||||| |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  14192890 atcaaaattcaatctcaatgtagcgaaaaatatcttaatagaacatcatgttggcacaacggcctcaacttaaacaacttcataaaaatccagtctaaac 14192791  T
Q  202 agtcttcaac 211  Q
    ||||||||||    
T  14192790 agtcttcaac 14192781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 281
Target Start/End: Original strand, 32997008 - 32997242
Alignment:
Q  44 acacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaa 143  Q
    |||||||||||||   |||| |||| |||  ||||||||||||||||||||||||   |||| | ||||||||||||||||| ||||| || | |||  |    
T  32997008 acacttctttcaaatataaatatagtaaagttactatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcagaaaacatttaaattca 32997106  T
Q  144 acatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatg 242  Q
    || || ||||| ||||||| |||||||||||||||||| || |||||||||| ||||| | |||||||||||||| | |||| |||| |||||||| |||    
T  32997107 acgtcgtgttggcacaacggcctcaacttaaacaactt-attaaaatccagtttaaacaaatcttcaacataaaa-tcataacaaat-acgtaacacatg 32997203  T
Q  243 gaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||||   |  |||||| ||| |||||||||||||||    
T  32997204 gaaaacaagcagaatcctcatcccgttacgtatcagagc 32997242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 77 - 249
Target Start/End: Complemental strand, 10660887 - 10660719
Alignment:
Q  77 ctatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaac 176  Q
    ||||||||||||||||||||||   |||| | ||||||||||||||||||||||| || | ||| || |||| ||||| ||||||| |||||||||||||    
T  10660887 ctatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaatcaa-catcgtgttggcacaacggcctcaacttaaac 10660790  T
Q  177 aacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    ||||| || |||||||||||||||| | |||||||||| ||| | ||||||||| |||||||| ||||||||||    
T  10660789 aactt-attaaaatccagtctaaacaaatcttcaacat-aaattcataataaat-acgtaacacatggaaaaca 10660719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 65 - 249
Target Start/End: Complemental strand, 13151505 - 13151323
Alignment:
Q  65 atagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgac 164  Q
    |||| |||| ||||||||||||||||||||  ||   |||| |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||| |    
T  13151505 atagtaaaattactatttatttcaatcatcatatgtcatca-aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggc 13151407  T
Q  165 ctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    |||||||||||||||||||| |||||||||| ||||| |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  13151406 ctcaacttaaacaacttaattaaaatccagtttaaacaaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 13151323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 36706607 - 36706362
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || |  |||||| | ||| ||||||||||  || | |||| ||||||||| ||||||||||||||||||||  ||      
T  36706607 tttttttgcataaatcagagtaaaacaa-ttaaacaggatgctacacttcttataatcataaatatagcaaaattactatttatttcaatcatcatatgt 36706509  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||| ||||| |||||||||||| | || | |  |||||| ||||| ||||||| |||||||||||||| |||| ||||||| | || ||||    
T  36706508 catca-aattaagtctcattgcagcggaaaacaactaagttcaacatcgtgttggcacaacggcctcaacttaaacagcttattaaaaattcggtttaaa 36706410  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | | |||||||||||||| | ||||||||| |||||||| ||||||||||    
T  36706409 caattcttcaacataaaa-tcataataaat-acgtaacacatggaaaaca 36706362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 44373023 - 44373268
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||||||||||| ||||||   | || |||| |||| ||||||||||||||||||||  ||      
T  44373023 tttttttgcataaatcagagtaaaacaact-aaacaggatgttacacttttttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgt 44373121  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| |||||||||||| | || | |  |||||||||||| |||||||  |||||||||||||| ||||| |||||||||| ||||    
T  44373122 catca-aattaaatctcattgcagcggaaaacaactaagtttaacatcatgttggcacaacggtctcaacttaaacaatttaattaaaatccagtttaaa 44373220  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  44373221 caaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 44373268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 44381879 - 44382124
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||||||||||| ||||||   | || |||| |||| ||||||||||||||||||||  ||      
T  44381879 tttttttgcataaatcagagtaaaacaact-aaacaggatgttacacttttttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgt 44381977  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| |||||||||||| | || | |  |||||||||||| |||||||  |||||||||||||| ||||| |||||||||| ||||    
T  44381978 catca-aattaaatctcattgcagcggaaaacaactaagtttaacatcatgttggcacaacggtctcaacttaaacaatttaattaaaatccagtttaaa 44382076  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  44382077 caaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 44382124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 65 - 249
Target Start/End: Original strand, 11065570 - 11065752
Alignment:
Q  65 atagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgac 164  Q
    |||| |||| ||||||||||||||||||||  ||   |||| |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||| |    
T  11065570 atagtaaaattactatttatttcaatcatcatatgtcatca-aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggc 11065668  T
Q  165 ctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    |||||||||||||| ||||| |||||||||| ||||| |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  11065669 ctcaacttaaacaagttaattaaaatccagtttaaacaaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 11065752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 65 - 249
Target Start/End: Complemental strand, 15121185 - 15121003
Alignment:
Q  65 atagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgac 164  Q
    |||| |||| ||||||||||||||||||||  ||   |||| |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||  |    
T  15121185 atagtaaaattactatttatttcaatcatcatatgtcatca-aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacagc 15121087  T
Q  165 ctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    |||||||||||||||||||| |||||||||| ||||| |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  15121086 ctcaacttaaacaacttaattaaaatccagtttaaacaaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 15121003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 43 - 249
Target Start/End: Complemental strand, 17131407 - 17131205
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    ||||||||||||||   |||| |||| |||| ||||||||||||||||||||||||  ||||| |||||||||||| |||||||||||| || | |||      
T  17131407 tacacttctttcaaatataaatatagtaaaattactatttatttcaatcatctcatgttatca-aattaaatctcattgcagcggaaaacatttaaattc 17131309  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 241  Q
    |||||| ||||| || |||| ||||||| | |||||||| || ||||||||||||| || | ||||||||||| || | ||||||||| |||||| | ||    
T  17131308 aacatcgtgttggcataacggcctcaacct-aacaactt-attaaaatccagtctagacaattcttcaacatagaa-tcataataaat-acgtaagacat 17131213  T
Q  242 ggaaaaca 249  Q
    ||||||||    
T  17131212 ggaaaaca 17131205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 36687189 - 36686997
Alignment:
Q  8 gcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcata 107  Q
    ||||||||||||||| || | || |||| | ||| ||||||||||||||   | || |||| |||| ||||||||||||||||||||  ||   |||| |    
T  36687189 gcataaatcagagtaaaacaact-aaacaggatgctacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgtcatca-a 36687092  T
Q  108 attaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 202  Q
    ||||||||| | |||||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| ||||| |||| ||||||    
T  36687091 attaaatctgattgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaattcagtttaaaca 36686997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 12370379 - 12370623
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| |||||||||| |||| || | || |||| | ||| ||||||||||||||   | || |||| |||| ||||||||||||||||||||  ||       
T  12370379 ttttttgcataaatcatagtaaaacaact-aaacaggatgctacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgtc 12370477  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| ||||| |||||| ||||| |||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| |||||| ||| |||||    
T  12370478 atca-aattatatctcattgcagtggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaatcaagtttaaac 12370576  T
Q  202 -agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
     |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  12370577 aaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 12370623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 831639 - 831590
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  831639 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 831590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 1196819 - 1196770
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1196819 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 1196770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 11662152 - 11662201
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11662152 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 11662201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 34958608 - 34958657
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34958608 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 34958657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 4070110 - 4070355
Alignment:
Q  32 aaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaa 131  Q
    |||| |||||| ||||| |||||||   |||| |||| |||| ||||||||||||||||||||||||   |||| | ||||||  || ||||||||||||    
T  4070110 aaacagaatgtcacactactttcaaatataaatatagtaaaattactatttatttcaatcatctcatgtcatca-atttaaattccattgcagcggaaaa 4070208  T
Q  132 tatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatc 230  Q
     || | ||| ||||||| |  || |||||||  ||||||||||||||||| || ||||| ||||||| || | |||||||||||||| | ||||  |||     
T  4070209 cat-taaattaaacatcgtaatggcacaacggtctcaacttaaacaactt-attaaaattcagtctagacaaatcttcaacataaaa-tcataa-caatt 4070304  T
Q  231 acgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||||| ||||||||||   ||||||| | ||| |||||||||||||||    
T  4070305 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 4070355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 281
Target Start/End: Complemental strand, 13700547 - 13700377
Alignment:
Q  109 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 207  Q
    ||||||||||||||| | ||||| || | |||  |||||| ||||| ||||||||||||||||||| ||| ||||| |||||||||| ||||| | ||||    
T  13700547 ttaaatctcaatgcaacagaaaacatttaaattcaacatcctgttggcacaacgacctcaacttaatcaatttaattaaaatccagtttaaacaaatctt 13700448  T
Q  208 caacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
     |||||| || | || |||||| ||||||||| |||||||||  ||| |||| | ||| |||||||||||||||    
T  13700447 taacatagaa-tcatgataaat-acgtaacatgtggaaaacagcaaa-atccccatcccgttacgtatcagagc 13700377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 32435455 - 32435258
Alignment:
Q  3 ttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataata 102  Q
    |||| ||||||||||||||| || | || |||| | ||| || |||||||||||   | || |||| |||| ||||||||||||||||||||  ||   |    
T  32435455 tttttgcataaatcagagtaaaacaact-aaacaggatgctatacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgtca 32435357  T
Q  103 tcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 202  Q
    ||| |||||||||||| ||  || ||||| | || | |  ||||| |||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  32435356 tca-aattaaatctcattgttgcagaaaacaactaagttcaacattatgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaaca 32435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 331
Target Start/End: Complemental strand, 14192782 - 14192694
Alignment:
Q  231 acgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacc 330  Q
    ||||||||||||| ||||| ||||||||| | ||| ||||||||||||||||||||||            ||||||||||||||||||||||||||||||    
T  14192782 acgtaacatatgggaaacaataaagatccccatcccgttacgtatcagagcacctaag------------agcaactaacagctactactctgcatcacc 14192695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 249
Target Start/End: Complemental strand, 14220913 - 14220702
Alignment:
Q  31 taaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaa 130  Q
    ||||| ||||||||||||||||||||   |||| |||| |||  ||||||||||| |||||| |||||   |||| | ||||||||||||||||||||||    
T  14220913 taaacagaatgttacacttctttcaaatataaatatagtaaagttactatttatt-caatcaactcatgtcatca-atttaaatctcaatgcagcggaaa 14220816  T
Q  131 atatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa-cagtcttcaacataaaagttataataaat 229  Q
    | |  |||||  || ||| |  || ||||||  |||||||||||| |||||| |  ||||||||||||||  | |||||||||| ||| | ||||||||     
T  14220815 aca--ttaatttaatatcgtaatggcacaactgcctcaacttaaataacttatt--aaatccagtctaaataaatcttcaacat-aaattcataataaa- 14220722  T
Q  230 cacgtaacatatggaaaaca 249  Q
    ||||||||| ||||||||||    
T  14220721 cacgtaacacatggaaaaca 14220702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 145787 - 145827
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  145787 aatcagagtaaaacaccttaaacggaatgttacacttcttt 145827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 16004252 - 16004292
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  16004252 aatcagagtaaaacaccttaaacggaatgttacacttcttt 16004292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 16110715 - 16110675
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  16110715 aatcagagtaaaacaccttaaacggaatgttacacttcttt 16110675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 34956304 - 34956344
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  34956304 aatcagagtaaaacaccttaaacggaatgttacacttcttt 34956344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 14553002 - 14553055
Alignment:
Q  45 cacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcat 98  Q
    ||||||||||||   |||| |||| |||| ||||||||||||||||||||||||    
T  14553002 cacttctttcaaatataaatatagtaaaattactatttatttcaatcatctcat 14553055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 15280724 - 15280800
Alignment:
Q  121 gcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtcta 198  Q
    ||||||||||| || | ||| ||||||| |  || ||||||| |||||||||||||||||| || |||||||||||||    
T  15280724 gcagcggaaaacatttaaattaaacatcgtaatggcacaacggcctcaacttaaacaactt-attaaaatccagtcta 15280800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 15732229 - 15732196
Alignment:
Q  298 aacagcaactaacagctactactctgcatcacct 331  Q
    |||||||||||||||||||||||||| |||||||    
T  15732229 aacagcaactaacagctactactctggatcacct 15732196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 834784 - 834744
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  834784 aatcagagtaaaacaccttaaatggaatgttacacttcttt 834744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 854825 - 854785
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  854825 aatcagagtaaaacaccttaaatggaatgttacacttcttt 854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 1199964 - 1199924
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  1199964 aatcagagtaaaacaccttaaatggaatgttacacttcttt 1199924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 1212829 - 1212789
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  1212829 aatcagagtaaaacaccttaaatggaatgttacacttcttt 1212789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 11659562 - 11659602
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || ||||||||||||||||||||| |||||    
T  11659562 aatcagagtaaaacaccttaaacggaatgttacacctcttt 11659602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 14419975 - 14420015
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    ||||||| || || |||||||||||||||||||||||||||    
T  14419975 aatcagactaaaacaccttaaacggaatgttacacttcttt 14420015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 16252477 - 16252441
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacactt 49  Q
    |||||||||| || |||||||||||||||||||||||    
T  16252477 aatcagagtaaaacaccttaaacggaatgttacactt 16252441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 47219 - 47548
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||| ||||||| || ||||||||||||| | |||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||    
T  47219 ttttttagcataaaacagagtaaaacaccttaaacggaaagctacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataa 47317  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||    
T  47318 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtttaaa 47417  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaac 300  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| | ||| |||| |||||||||||||||||||||||||| |     
T  47418 cagtcttcaacataaaagttataataaatcacgtaacacatggaaaacaataaagatccccatcccgttatgtatcagagcacctaagactcatgtgtag 47517  T
Q  301 agcaactaacagctactactctgcatcacct 331  Q
     |||||||||||| |||||||||||||||||    
T  47518 tgcaactaacagcaactactctgcatcacct 47548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 201; Significance: 1e-109; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 19878425 - 19878704
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||| |||| |||| ||||||||||||||||||| ||||||    
T  19878425 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagtaaaattactatttatttcaatcatttcataa 19878524  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  19878525 tatcaaaattaaatctcaatgcagcggaaaatatcttaat-aaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaa 19878623  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||   ||| |||||||||||||||    
T  19878624 cagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaatatcccgatcccgttacgtatcagagc 19878704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 24977284 - 24977579
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||| ||||||||||||||||| || ||||||||||||||| |||||||||||||| | |||| |||||||   ||||||| ||||||||||| ||||||    
T  24977284 ttttatagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacataaatatagcaattttactatt-atttcaatcatttcataa 24977382  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  24977383 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacgacggcctcaacttaaacaacttaataaaaatccagtctaaa 24977482  T
Q  201 cagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagcacctaagactcatgtg 297  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||||||| | ||| |||||||||||||||||||||||||||||||    
T  24977483 cagtcttcaacataaaagtcatagtaaatcacgtaacataaggaaaacaataaagatccccatcccgttacgtatcagagcacctaagactcatgtg 24977579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 41682642 - 41682435
Alignment:
Q  79 atttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaa 178  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  41682642 atttatttcaatcatttcataatatca-aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaa 41682544  T
Q  179 cttaataaaaatccagtctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcag 278  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||    
T  41682543 cttaataaaaatccagtctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttacgtatcag 41682444  T
Q  279 agcacctaa 287  Q
    |||||||||    
T  41682443 agcacctaa 41682435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 172 - 331
Target Start/End: Original strand, 19881266 - 19881425
Alignment:
Q  172 taaacaacttaataaaaatccagtctaaacagtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttac 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||    
T  19881266 taaacaacttaataaaaatccagtctaaacagtcttcaacataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatcccgttac 19881365  T
Q  272 gtatcagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacct 331  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  19881366 gtatcagagcacctaagactcatgtgaagagcaactaacggctactactctgaatcacct 19881425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 281
Target Start/End: Complemental strand, 39696509 - 39696274
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    |||||||| |||||   |||| |||| |||| ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| || | ||| |    
T  39696509 tacacttccttcaaatataaatatagtaaaaatactatttatttcaatcatctcatgttatca-aattaaatctcaatgcagcggaaaacatttaaatta 39696411  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 241  Q
    |||||| ||||| ||||||| ||| |||||||||||||| || ||||||||||||| || | | |||| ||||||| | ||||||||| |||||||| ||    
T  39696410 aacatcgtgttggcacaacggccttaacttaaacaactt-attaaaatccagtctagacaaattttcagcataaaa-tcataataaat-acgtaacacat 39696314  T
Q  242 ggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    ||||||||   || |||||| ||| |||||||||||||||    
T  39696313 ggaaaacaagcaaaatcctcatcccgttacgtatcagagc 39696274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 25850204 - 25849928
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||| |||||||||| |||   |||| |||| |||| ||||||||||||||||||||  ||      
T  25850204 tttttttgcataaatcagagtaaaacaact-aaacaggatgctacacttcttacaattataaatatagtaaaattactatttatttcaatcatcgtatgt 25850106  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| ||||||||||||||||||||||||| | || | |  |||||| ||||| ||||| | ||||||||||||||||||| ||||||| |||| ||||    
T  25850105 catca-aattaaatctcaatgcagcggaaaacaactaagttcaacatcgtgttggcacaatggcctcaacttaaacaacttattaaaaattcagtttaaa 25850007  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    | | |||||||||||||| | ||||||||| |||||||| ||||||||||| ||| |||| | ||| |||||||||||||||    
T  25850006 caaatcttcaacataaaa-tcataataaat-acgtaacacatggaaaacatcaaa-atccccatcccgttacgtatcagagc 25849928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 19664127 - 19664402
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||| ||| || | || |||| | ||| |||||||||| |||   | || |||| |||| |||||||||||||| |||||||||      
T  19664127 tttttttgcataaatcagtgtaaaacaactaaaacaggatgctacacttcttacaaatatgaatatagtaaaattactatttatttcattcatctcatgt 19664226  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| | ||||||||||||||||||||||| || | ||| ||||||| ||||| ||||||| |||||||||||||||||| || |||||||||| ||||    
T  19664227 catca-atttaaatctcaatgcagcggaaaacatttaaattaaacatcgtgttggcacaacggcctcaacttaaacaactt-attaaaatccagtttaaa 19664324  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagag 280  Q
    | | |||||||||||||| | ||||||||| |||||||| ||||||||||  ||| |||| | ||| ||||||||||||||    
T  19664325 caaatcttcaacataaaa-tcataataaat-acgtaacacatggaaaacaacaaa-atccccatcccgttacgtatcagag 19664402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 281
Target Start/End: Original strand, 23946630 - 23946899
Alignment:
Q  8 gcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcata 107  Q
    ||||||||||||||| || | || |||| | ||| ||||||||||||||   |||| |||| |||| ||||||||||||||||||||||||   |||| |    
T  23946630 gcataaatcagagta-aacaactaaaacaggatgctacacttctttcaaatataaatatagtaaaattactatttatttcaatcatctcatgtcatca-a 23946727  T
Q  108 attaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtct 206  Q
     ||||||||||||||||||||||| || | |||  |||||  ||||| ||||||| |||||||||||||||||| || ||||||||||||| || | |||    
T  23946728 tttaaatctcaatgcagcggaaaacatttaaattcaacattgtgttggcacaacggcctcaacttaaacaactt-attaaaatccagtctagacaaatct 23946826  T
Q  207 tcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    ||||||||||| | ||||||||| |||||| | ||||||||||   ||||||| | | | |||||||||||||||    
T  23946827 tcaacataaaa-tcataataaat-acgtaatacatggaaaacaagcaagatccccattccgttacgtatcagagc 23946899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 43 - 202
Target Start/End: Complemental strand, 22585399 - 22585242
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    ||||||||||||||   |||| |||| | || ||||||||||||||||||||||||   |||| | ||||||||||||||||||||||| || | |||      
T  22585399 tacacttctttcaaatataaacatagtataattactatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattc 22585301  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaaca 202  Q
    |||||| ||||| |||||||||||||||||||||||||| || |||||||||| ||||||    
T  22585300 aacatcgtgttggcacaacgacctcaacttaaacaactt-attaaaatccagtttaaaca 22585242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 20180496 - 20180251
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||||||||||| ||||||   | || |||| |||| ||||||||||||||||||||  ||      
T  20180496 tttttttgcataaatcagagtaaaacaact-aaacaggatgttacacttttttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgt 20180398  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| |||||||||||| | || | |  |||||||||||| |||||||  |||||||||||||| ||||| |||||||||| ||||    
T  20180397 catca-aattaaatctcattgcagcggaaaacaactaagtttaacatcatgttggcacaacggtctcaacttaaacaatttaattaaaatccagtttaaa 20180299  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  20180298 caaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 20180251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 21398278 - 21398523
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || ||  ||| || ||||||||||||||   | || |||| |||| ||||||||||||||||||||  ||      
T  21398278 tttttttgcataaatcagagtaaaacaactaaatagga-tgctacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgt 21398376  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| ||||||| |||| | |  | |  |||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||    
T  21398377 catca-aattaaatctcattgcagcgaaaaagaacaaagttcaacatcatgttggcacaacgacctcaacttaaacaacttaattaaaatccagtttaaa 21398475  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  21398476 caaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 21398523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 21792771 - 21793016
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || ||  ||| || ||||||||||||||   | || |||| |||| ||||||||||||||||||||  ||      
T  21792771 tttttttgcataaatcagagtaaaacaactaaatagga-tgctacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgt 21792869  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| ||||||| |||| | |  | |  |||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||    
T  21792870 catca-aattaaatctcattgcagcgaaaaagaacaaagttcaacatcatgttggcacaacgacctcaacttaaacaacttaattaaaatccagtttaaa 21792968  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  21792969 caaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 21793016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 249
Target Start/End: Original strand, 23417795 - 23417934
Alignment:
Q  109 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa-cagtctt 207  Q
    ||||||||||||||||||||||| || | |||  ||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||  | ||||    
T  23417795 ttaaatctcaatgcagcggaaaacatttaaattcaacatcaggttggcacaacgacctcaacttaaacaacttaattaaaatccagtttaaataaatctt 23417894  T
Q  208 caacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    |||||||||| | || |||||| |||||||| ||||||||||    
T  23417895 caacataaaa-tcatgataaat-acgtaacacatggaaaaca 23417934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 281
Target Start/End: Complemental strand, 42267455 - 42267251
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    ||||||||||||||||||||| ||   |||| | ||||||||||||||||||||||| || | ||| ||||||  ||||| ||||||| |||||||||||    
T  42267455 tactatttatttcaatcatcttatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattaaacattgtgttggcacaacggcctcaacttaa 42267357  T
Q  175 acaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgt 273  Q
    |||||||| | ||||||||| ||| || | |||||||||| ||  | ||||||||| ||| |||| |||||||||| | ||||||| | ||  |||||||    
T  42267356 acaacttatttaaaatccagcctagacaaatcttcaacat-aatttcataataaat-acgcaacacatggaaaacaatcaagatccacttctcgttacgt 42267259  T
Q  274 atcagagc 281  Q
    ||||||||    
T  42267258 atcagagc 42267251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 17216932 - 17217116
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | ||  ||| ||||| | |||||| |||||   |||| |||| |||| ||||||||||||||||||||||||       
T  17216932 ttttttgcataaatcagagta-aacaactacaacagaatgctgcacttccttcaaatataaatatagtaaaattactatttatttcaatcatctcatgtc 17217030  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaa 188  Q
    |||| | ||||||||||||||||||||||| || | ||| ||||||| | ||| ||||| | ||||||||||||||||||| |||||    
T  17217031 atca-atttaaatctcaatgcagcggaaaacatttaaattaaacatcgtattggcacaatggcctcaacttaaacaacttattaaaa 17217116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 290
Target Start/End: Complemental strand, 6103586 - 6103359
Alignment:
Q  60 taaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacaca 159  Q
    |||| |||| |||| |||||||||||||||| |||||||   |||| | |||||||||| |||||||||||| || | | | ||||||| |  || ||||    
T  6103586 taaatatagtaaaattactatttatttcaattatctcatgtcatca-atttaaatctcattgcagcggaaaacatttaagttaaacatcgtagtggcaca 6103488  T
Q  160 acgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatc 258  Q
    ||| |||||||||||||||||| || |||||||||||||  | | |||||||||||||| | | ||  ||| |||||||| ||||||||||   ||||||    
T  6103487 acggcctcaacttaaacaactt-attaaaatccagtctaggcaaatcttcaacataaaa-tcaaaacgaat-acgtaacacatggaaaacaagtaagatc 6103391  T
Q  259 ctcgtcctgttacgtatcagagcacctaagac 290  Q
    | | | | ||||||||||||||||||||||||    
T  6103390 cccattccgttacgtatcagagcacctaagac 6103359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 8490 - 8669
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | ||  ||| | ||| ||||||||| ||||   |||| |||| |||  ||||||||||||||||||||||||      
T  8490 tttttttgcataaatcagagta-aacaactagaacaggatgctacacttctatcaaatttaaatatagtaaagttactatttatttcaatcatctcatgt 8588  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaactta 182  Q
     |||| | ||||||||||||||||||||||| || |  ||  |||||| ||||| ||||||| |||||||||||||||||||    
T  8589 catca-atttaaatctcaatgcagcggaaaacatttagattcaacatcttgttggcacaacggcctcaacttaaacaactta 8669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 281
Target Start/End: Complemental strand, 17908572 - 17908360
Alignment:
Q  65 atagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgac 164  Q
    |||| |||| ||||||||||||||||||||||||   |||| | |||||||||| || ||||||||| || | ||| ||||||| |  || ||||||| |    
T  17908572 atagaaaaattactatttatttcaatcatctcatgtcatca-atttaaatctcattgtagcggaaaacat-taaattaaacatcgtaatggcacaacggc 17908475  T
Q  165 ctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgt 263  Q
    ||||||||||||||||| || |||||||||||||  | | |||||||||||||| | ||||  | | |||||||| ||||||||||   ||||||| | |    
T  17908474 ctcaacttaaacaactt-attaaaatccagtctaggcaaatcttcaacataaaa-tcataa-catttacgtaacacatggaaaacaagtaagatccccat 17908378  T
Q  264 cctgttacgtatcagagc 281  Q
    || |||||||||||||||    
T  17908377 cccgttacgtatcagagc 17908360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 22243859 - 22243962
Alignment:
Q  113 atctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaac 211  Q
    |||||||||||||||||||||| | | | |||||||||  || ||||||| |||||||||||||||||| || ||||||||||||| || | ||||||||    
T  22243859 atctcaatgcagcggaaaatatttaatttaaacatcataatggcacaacggcctcaacttaaacaactt-attaaaatccagtctagacaaatcttcaac 22243957  T
Q  212 ataaa 216  Q
    |||||    
T  22243958 ataaa 22243962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 187
Target Start/End: Original strand, 23888145 - 23888256
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    |||||||||||| |||||||||||   |||| | ||||||||||||||||||||||| || | ||| ||||||| |  || ||||||| |||||||||||    
T  23888145 tactatttattttaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattaaacatcgtaatggcacaacggcctcaacttaa 23888243  T
Q  175 acaacttaataaa 187  Q
    |||||||| ||||    
T  23888244 acaacttattaaa 23888256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 20453428 - 20453553
Alignment:
Q  70 aaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaa 169  Q
    |||| ||||||||||||||||||||||||   |||| | ||||||||||||||||| ||||| |  | |||  |||||| |  || ||||||||||| ||    
T  20453428 aaaaatactatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcagaaaacaattaaattcaacatcgtaatggcacaacgaccttaa 20453526  T
Q  170 cttaaacaacttaataaaaatccagtct 197  Q
    |||||| ||||| || ||||||||||||    
T  20453527 cttaaaaaactt-attaaaatccagtct 20453553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 25066519 - 25066559
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  25066519 aatcagagtaaaacaccttaaacggaatgttacacttcttt 25066559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 27943446 - 27943406
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  27943446 aatcagagtaaaacaccttaaacggaatgttacacttcttt 27943406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 18759368 - 18759537
Alignment:
Q  8 gcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcata 107  Q
    ||||||||||||||| || | || |||| | ||| ||||||||||||||    ||| |||| |||  ||||||| ||||||||||||||||   |||| |    
T  18759368 gcataaatcagagta-aacaactaaaactggatgctacacttctttcaaatacaaatatagtaaagttactattcatttcaatcatctcatgtcatca-a 18759465  T
Q  108 attaaatctcaa-tgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaa 178  Q
     ||||||||||| |||||||||||| || | |||  |||||| ||||| ||||| | |||||| ||||||||    
T  18759466 tttaaatctcaaatgcagcggaaaacatttaaattcaacatcgtgttggcacaatggcctcaatttaaacaa 18759537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 12576100 - 12576140
Alignment:
Q  12 aaatcagagtacaataccttaaacggaatgttacacttctt 52  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  12576100 aaatcagagtaaaacaccttaaacggaatgtcacacttctt 12576140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 25648284 - 25648248
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacactt 49  Q
    |||||||||| || |||||||||||||||||||||||    
T  25648284 aatcagagtaaaacaccttaaacggaatgttacactt 25648248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 281
Target Start/End: Original strand, 6711 - 6979
Alignment:
Q  12 aaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataatta 111  Q
    ||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||| ||||||||||||| ||||||||||| |||||    
T  6711 aaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagcaaaattactaattatttcaatcatttcataatatca-aatta 6809  T
Q  112 aatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaac 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  6810 aatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccaatctaaatagtcttcaac 6909  T
Q  212 ataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||   ||| |||||||||||||||    
T  6910 ataaaagtcataataaatcacgtaacatatggaaaacaataaagatcccgatcccgttacgtatcagagc 6979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 9800 - 9842
Alignment:
Q  12 aaatcagagtacaataccttaaacggaatgttacacttctttc 54  Q
    ||||||||||| || ||||||||||||||| ||||||||||||    
T  9800 aaatcagagtaaaacaccttaaacggaatgctacacttctttc 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 281
Target Start/End: Complemental strand, 12360040 - 12359772
Alignment:
Q  12 aaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataatta 111  Q
    ||||||||||| || | ||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  12360040 aaatcagagtaaaacatcttaaacggaatgctacacttctttcaaacgtaaatatagcaaaattactatttatttcaatcatttcataatatca-aatta 12359942  T
Q  112 aatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaac 211  Q
    ||| ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12359941 aatttcaatgcagcgaaaaatatcttaataaaacatcatgttggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaac 12359842  T
Q  212 ataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  12359841 ataaaagtcataataaatcacgtaacatatggaaaacaataaagatccccatccagttacgcatcagagc 12359772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 21652413 - 21652608
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||    
T  21652413 ttttttagcataaatcagagtaaaacaccttaaacggaatgctacacttctttcaaacgtaaatatagcaaaattactatttatttcaatcatttcataa 21652512  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtc 196  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||||| |||||    
T  21652513 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcactatggcctcaacttaaacaacttaataaaaattcagtc 21652608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 249
Target Start/End: Original strand, 24725705 - 24725913
Alignment:
Q  39 atgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatctta 138  Q
    ||||||||||||||||||   |||| |||| |||  ||||||||||| |||||| |||||   |||| ||||||||||||||||||||||||| || | |    
T  24725705 atgttacacttctttcaaatataaatatagtaaagttactatttatt-caatcaactcatgtcatca-aattaaatctcaatgcagcggaaaacatttaa 24725802  T
Q  139 ataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccag-tctaaac-agtcttcaacataaaagttataataaatcacgtaa 236  Q
    ||  |||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | ||||| | |||||||||||||| | || |||||| ||||||    
T  24725803 attcaacaccatgttggcacaacgacctcaacttaaacaacttaattaaaatccagttttaaacaaatcttcaacataaaa-tcatgataaat-acgtaa 24725900  T
Q  237 catatggaaaaca 249  Q
    || ||||||||||    
T  24725901 cacatggaaaaca 24725913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 42696104 - 42696277
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    ||||||| ||||||   |||| |||| |||| ||||||||||||||||||||||||   |||| | ||||||||||||||||||||||| || | |||      
T  42696104 tacacttttttcaagtataaacatagtaaaattactatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattc 42696202  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaa 217  Q
    |||||||||||| ||||||| |||||||||||||||||| || |||||||||| ||||| | ||||||||||||||    
T  42696203 aacatcatgttggcacaacggcctcaacttaaacaactt-attaaaatccagtttaaacaaatcttcaacataaaa 42696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 281
Target Start/End: Original strand, 45753852 - 45754087
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    |||| |||||||||   |||| |||| |||| ||||||||||||||||||||||||   ||  || |||| ||||||||||||||||||||| | |||      
T  45753852 tacatttctttcaaatataaacatagtaaaattactatttatttcaatcatctcatgtcatt-tatttaagtctcaatgcagcggaaaatatttaaattc 45753950  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 241  Q
    |||||||||||| ||||||| ||||||||||| |||||| || | || ||||| || || | |||||||||||||| | ||||||||| |||||||| ||    
T  45753951 aacatcatgttggcacaacggcctcaacttaagcaactt-attagaacccagtttagacaattcttcaacataaaa-tcataataaat-acgtaacacat 45754047  T
Q  242 ggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    | ||||||   ||||||||| |||||||||||||||||||    
T  45754048 gaaaaacaagcaagatcctcatcctgttacgtatcagagc 45754087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 43 - 281
Target Start/End: Original strand, 22348755 - 22348991
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    ||||||||||| ||   |||| |||| |||| ||||||||||||||||||||||||   |||| | ||||||||||||||||||||||| || | |||      
T  22348755 tacacttctttaaaatataaatatagtaaaattactatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattc 22348853  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 241  Q
    ||| || ||||| ||||||  ||||||||||||||||| | | ||||||||||||| || | |||||||||| ||  | ||||||||| ||| |||| ||    
T  22348854 aacttcgtgttggcacaacagcctcaacttaaacaactaatttaaaatccagtctagacaaatcttcaacat-aatttcataataaat-acgcaacacat 22348951  T
Q  242 ggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||||| | ||||||| | || ||||||||||||||||    
T  22348952 ggaaaacaatcaagatccccttcatgttacgtatcagagc 22348991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 24724481 - 24724344
Alignment:
Q  60 taaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacaca 159  Q
    |||| |||| |||| ||||||||||||||||||||||||   |||| | |||||| ||||| |||||||||| || | ||| ||||||| ||||| ||||    
T  24724481 taaatatagtaaaattactatttatttcaatcatctcatgtcatca-atttaaatttcaattcagcggaaaacatttaaattaaacatcgtgttggcaca 24724383  T
Q  160 acgacctcaacttaaacaacttaataaaaatccagtcta 198  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  24724382 acgacctcaacttaaacaacttatttaaaatccagtcta 24724344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 279
Target Start/End: Original strand, 51475216 - 51475449
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    ||||||||||| ||   |||| |||| |||| |||||| |||||||||||||||||   |||| | ||||||||||||||||||||||| || | |||      
T  51475216 tacacttctttaaaatataaatatagtaaaattactatatatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattc 51475314  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 241  Q
    ||| || ||||| ||||||| | |||||||||| |||||| |  ||||||||||||||| | |||| ||||| ||| | |||||||| ||||||||| ||    
T  51475315 aacttcgtgttggcacaacggcttcaacttaaataacttatt--aaatccagtctaaacaaatctttaacat-aaattcataataaa-cacgtaacacat 51475410  T
Q  242 ggaaaacattaaaga-tcctcgtcctgttacgtatcaga 279  Q
    ||||||||   |||| ||||| ||| |||||||||||||    
T  51475411 ggaaaacaagcaagattcctcatcccgttacgtatcaga 51475449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 28313395 - 28313444
Alignment:
Q  328 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28313395 accttagttttgatgaacaaactcttacacaatcagattctccccctttg 28313444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 280
Target Start/End: Complemental strand, 19762689 - 19762472
Alignment:
Q  65 atagcaaaagtactatttatttcaatcatctcata-atatcat--aattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaac 161  Q
    |||| |||| ||||||||||||||||||||  | | || ||||  ||||||||||||||||| ||||||| | || | |  |||||| || || || ||     
T  19762689 atagtaaaactactatttatttcaatcatcatacatatgtcatcaaattaaatctcaatgcatcggaaaacaactaagttcaacatcgtgatggcataat 19762590  T
Q  162 gacctcaacttaaa-caacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcc 259  Q
    | || ||||||||| ||||||| |||||||||||| ||||| | |||||||| ||||| | ||||||||| |||||||| ||||||||||  ||| || |    
T  19762589 ggccccaacttaaaacaacttattaaaaatccagtttaaacaaatcttcaacgtaaaa-tcataataaat-acgtaacacatggaaaacagcaaa-attc 19762493  T
Q  260 tcgtcctgttacgtatcagag 280  Q
    || ||| ||||||||||||||    
T  19762492 tcatcccgttacgtatcagag 19762472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 280
Target Start/End: Original strand, 1641725 - 1641927
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    |||||||||||||| |||||| ||   |||| | |||||| |||||||||||||||| |  | |||  || ||| |  || ||||||| | | |||||||    
T  1641725 tactatttatttcagtcatcttatgtcatca-atttaaatatcaatgcagcggaaaacaattaaatttaatatcgtaatggcacaacggcattaacttaa 1641823  T
Q  175 acaacttaataaaaatccagtctaaacag-tcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgt 273  Q
    |||||||| ||||| ||||||||| |||  |||||||||||||  | |||||||| ||||||||| ||||||||||   ||||||| | ||| |||||||    
T  1641824 acaacttattaaaa-tccagtctagacaaatcttcaacataaat-tcataataaa-cacgtaacacatggaaaacaaacaagatccccatcccgttacgt 1641920  T
Q  274 atcagag 280  Q
    |||||||    
T  1641921 atcagag 1641927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 16370189 - 16370229
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  16370189 aatcagagtaaaacaccttaaacggaatgttacacttcttt 16370229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 198
Target Start/End: Original strand, 19674804 - 19674926
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaa-tgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaactta 173  Q
    ||||||| ||||||||||||||||   |||| | ||||||||||| |||||||||||| || | |||  |||||| ||||| || || | |||||| |||    
T  19674804 tactattcatttcaatcatctcatgtcatca-atttaaatctcaaatgcagcggaaaacatttaaattcaacatcgtgttggcataatggcctcaattta 19674902  T
Q  174 aacaacttaataaaaatccagtcta 198  Q
    |||||||| || |||||||||||||    
T  19674903 aacaactt-attaaaatccagtcta 19674926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 21341388 - 21341428
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  21341388 aatcagagtaaaacaccttaaacggaatgttacacttcttt 21341428  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 29533239 - 29533279
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  29533239 aatcagagtaaaacaccttaaacggaatgttacacttcttt 29533279  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 13301275 - 13301349
Alignment:
Q  111 aaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaa 187  Q
    |||||||| |||||||||||| ||  |||| ||||| | |  |||||||||||||||||| ||||||||||| ||||    
T  13301275 aaatctcattgcagcggaaaacat--taattaaacaacgtaatgacacaacgacctcaacataaacaacttattaaa 13301349  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 28205203 - 28205170
Alignment:
Q  298 aacagcaactaacagctactactctgcatcacct 331  Q
    |||||||||||||||||||||||||| |||||||    
T  28205203 aacagcaactaacagctactactctggatcacct 28205170  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 32648319 - 32648359
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || | |||||||||||||||||||||||||    
T  32648319 aatcagagtaaaacaacttaaacggaatgttacacttcttt 32648359  T

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Target: scaffold0117 (Bit Score: 166; Significance: 9e-89; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 13 - 281
Target Start/End: Complemental strand, 42229 - 41961
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttattt-caatcatctcataatatcataatta 111  Q
    |||||||||| |  ||||||||||||||| |||||||||||||| |||||| |||| |||| ||||||| |||| ||||| | |||||||| || |||||    
T  42229 aatcagagtaaaggaccttaaacggaatgctacacttctttcaaacgtaaatatagtaaaattactattcattttcaatcgtttcataatacca-aatta 42131  T
Q  112 aatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtcttcaac 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  42130 aatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggcctcaatttaaacaacttaataaaaatccagtctaaacagtcttcaac 42031  T
Q  212 ataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||||| ||||||||| ||||||| ||||||||||| ||||||||| | ||| |||||||||||||||    
T  42030 ataaaagtcataataaattacgtaacttatggaaaacaataaagatccccatcccgttacgtatcagagc 41961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 19434 - 19474
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  19434 aatcagagtaaaacaccttaaaaggaatgttacacttcttt 19474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 138; Significance: 5e-72; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 8541 - 8730
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||||||||||||||||||| || ||||||||| ||||| |||||||||||||| |||||| ||||||||| ||||||||||| ||||||| ||||||    
T  8541 ttttttagcataaatcagagtaaaacaccttaaacagaatgctacacttctttcaaacgtaaatatagcaaaattactatttattacaatcatttcataa 8640  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaat 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  8641 tatcaaaattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttggcacaacggtctcaacttaaacaacttaataaaaat 8730  T

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Target: scaffold0335; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 276 - 331
Target Start/End: Original strand, 8742 - 8797
Alignment:
Q  276 cagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacct 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8742 cagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacct 8797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 144904 - 145118
Alignment:
Q  8 gcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcata 107  Q
    ||||||||||||||| || | || |||| | ||| ||||||||||||||   | || |||| |||| ||||||||||||||||||||  ||   |||| |    
T  144904 gcataaatcagagtaaaacaact-aaacaggatgctacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgtcatca-a 145001  T
Q  108 attaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaacagtctt 207  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  145002 attaaatctcaatgcagtggaaattatcttaataaaacatcatgttggcacaacggccgcaacttaaacaacttaataaaaattcagtctaaacagtctt 145101  T
Q  208 caacataaaagttataa 224  Q
    |||||||||||| ||||    
T  145102 caacataaaagtcataa 145118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 108854 - 108894
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  108854 aatcagagtaaaacaccttaaacggaatgttacacttcttt 108894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 281
Target Start/End: Original strand, 94615 - 94892
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   |||| |||| |||| ||||||||||||||||||||||||       
T  94615 ttttttgcataaatcagagta-aacaactaaaacaggatgctacacttctttcaaatataaatatagtaaaattactatttatttcaatcatctcatgtc 94713  T
Q  102 atcataattaaatctcaatgcagcgg-aaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    |||| | ||||||||||||||||||| |||| || | ||| ||||||| ||||| ||||||| |||||||||||||||||| || ||||||||||||| |    
T  94714 atca-atttaaatctcaatgcagcggaaaaacatttaaattaaacatcgtgttggcacaacggcctcaacttaaacaactt-attaaaatccagtctaga 94811  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaac-attaaagatcctcgtcctgttacgtatcagagc 281  Q
    | | |||||||||||||| | ||||||||| | |||||| ||||||||| | |||||||||   ||| |||||||||||||||    
T  94812 caaatcttcaacataaaa-tcataataaat-atgtaacacatggaaaacaagtaaagatcccaatcccgttacgtatcagagc 94892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 7343 - 7587
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   |||| |||| |||  |||||||||||||||||||||||||     
T  7343 tttttttgcataaatcagagta-aacaactaaaacaggatgctacacttctttcaaatataaatatagtaaagttactatttatttcaatcatctcatat 7441  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| | ||||||||||||||||||||||| || | |||  ||| ||||||||  ||||||  ||||||||||||||||| || |||||| ||| ||||    
T  7442 catca-atttaaatctcaatgcagcggaaaacatttaaattcaacgtcatgttggtacaacggtctcaacttaaacaactt-attaaaatctagtttaaa 7539  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | | |||||||||||||| | ||||||||| ||||| || ||||||||||    
T  7540 caaatcttcaacataaaa-tcataataaat-acgtagcacatggaaaaca 7587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 69536 - 69337
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| | ||||||||||||| || | || |||| | ||| ||||||||||||||   |||| |||| |||| ||||||||||||||||||||  ||      
T  69536 tttttttgtataaatcagagtaaaacaact-aaacaggatgctacacttctttcaaatataaatatagtaaaattactatttatttcaatcatcatatgt 69438  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||    
T  69437 catca-aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaa 69339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 75 - 249
Target Start/End: Original strand, 16853 - 17024
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    ||||||||||||||||||||||||   |||| | ||||||||||||||||||||||| || | |||  |||||| ||||| ||||||| ||||||||| |    
T  16853 tactatttatttcaatcatctcatgtcatca-atttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacggcctcaacttta 16951  T
Q  175 acaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    ||||||| || |||||| ||| ||||| | |||||||||||||| | ||||||||| |||||||||||||||||||    
T  16952 acaactt-attaaaatcaagtttaaacaaatcttcaacataaaa-tcataataaat-acgtaacatatggaaaaca 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 4271 - 3995
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || ||||   ||| ||||||||||||||   | || |||| |||| ||||||||||||||||||||  ||      
T  4271 tttttttgcataaatcagagtaaaacaact-aaacaagatgatacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgt 4173  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    ||||| |||||||||||| |||||||||||| |  | | |  |||||||||||| ||||||| ||||||||||||||||||||| |||||||| | ||||    
T  4172 tatca-aattaaatctcattgcagcggaaaacaattaagttcaacatcatgttggcacaacggcctcaacttaaacaacttaattaaaatccaatttaaa 4074  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    | |  ||||||||||||| | || |||||| || ||||| ||||||||||   || |||||| ||| |||||||||||||||    
T  4073 caaaacttcaacataaaa-tcatgataaat-acataacacatggaaaacaagcaa-atcctcatcccgttacgtatcagagc 3995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 59660 - 59811
Alignment:
Q  9 cataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataa 108  Q
    |||||||||||||| |||| || |||| | ||| ||||||||||||||   |||| |||| |||  |||||||||||||| |||||||||   |||| |     
T  59660 cataaatcagagta-aataactaaaacaggatgctacacttctttcaaatataaatatagtaaagttactatttatttcattcatctcatgtcatca-at 59757  T
Q  109 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacg 162  Q
    ||||||||||||||||||||||| || | |||  |||||| ||||| |||||||    
T  59758 ttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacg 59811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 43 - 216
Target Start/End: Complemental strand, 48420 - 48247
Alignment:
Q  43 tacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataa 142  Q
    |||| |||||||||   |||| |||| |||| |||||| |||||||||||||||||   |||| | ||||||||||||||||| ||||| || | |||      
T  48420 tacaattctttcaaatataaatatagtaaaattactatatatttcaatcatctcatgtcatca-atttaaatctcaatgcagcagaaaacatttaaattc 48322  T
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaa 216  Q
    ||| |||||||| ||||||| ||||||||||||||||||| | ||||||||||||| || | |||||||||||||    
T  48321 aacttcatgttggcacaacggcctcaacttaaacaacttatttaaaatccagtctagacaaatcttcaacataaa 48247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 27701 - 27818
Alignment:
Q  79 atttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaa 178  Q
    ||||||||||||||||||||   |||| |||||||||||||||||||||||||||| | ||| ||||||| ||||| ||| ||| ||| | |||||||||    
T  27701 atttatttcaatcatctcatgtcatca-aattaaatctcaatgcagcggaaaatatttaaattaaacatcgtgttggcacgacggccttagcttaaacaa 27799  T
Q  179 cttaataaaaatccagtcta 198  Q
    |||||| |||||||||||||    
T  27800 cttaat-aaaatccagtcta 27818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 79328 - 79083
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || ||||   ||| ||||||||||||||   | || |||| |||| |||||||||||||||| |||  ||      
T  79328 tttttttgcataaatcagagtaaaacaact-aaacaagatgctacacttctttcaaatatgaatatagtaaaattactatttatttcaattatcatatgt 79230  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||||||||| ||||||||||||||| |||||||| | ||||    
T  79229 catca-aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacgacctcagcttaaacaacttaattaaaatccaatttaaa 79131  T
Q  201 c-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    | |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  79130 caaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 79083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 249
Target Start/End: Complemental strand, 10741 - 10498
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || ||||   ||| ||||||||||||||   | || |||| |||| ||||||||||||||||||||  ||       
T  10741 ttttttgcataaatcagagtaaaacaact-aaacatgatgctacacttctttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgtc 10643  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| |||||||||||| |||||||||||| | || | |  |||||||||||| ||||||| | ||||||||||||||||||| |||||||||| |||||    
T  10642 atca-aattaaatctcattgcagcggaaaacaactaagttcaacatcatgttggcacaacggc-tcaacttaaacaacttaattaaaatccagtttaaac 10545  T
Q  202 -agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
     |  ||||||||||||| | || |||||| |||||||| ||||||||||    
T  10544 aaaacttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 10498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 396838 - 397082
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| |  ||  ||||| | ||| ||||||||||||||   |||| |||| |||  ||||||||||| ||||||||||||      
T  396838 tttttttgcataaatcagagtaaacaac--taaacaggatgctacacttctttcaaatataaatatagtaaagttactatttatt-caatcatctcatgt 396934  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaa-taaaaatccagtctaa 199  Q
     |||| | ||||||||||||||| ||||||| || | |||  |||||| ||||| ||||| | ||| |||||||||||||||| |||||||||||| |||    
T  396935 catca-atttaaatctcaatgcatcggaaaacatttaaattcaacatcgtgttggcacaatggcctaaacttaaacaacttaattaaaaatccagtttaa 397033  T
Q  200 ac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
    || | |||||||||||||| | || |||||| |||||||| ||||||||||    
T  397034 acaaatcttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 397082  T

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Target: scaffold0671 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 4316 - 4424
Alignment:
Q  109 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtctt 207  Q
    ||||||||||||||||||||||| || | |||  |||||| ||||| |||||||||||||||||||||||||| || |||||||||| ||||| | ||||    
T  4316 ttaaatctcaatgcagcggaaaacatttaaattcaacatcgtgttggcacaacgacctcaacttaaacaactt-attaaaatccagtttaaacaattctt 4414  T
Q  208 caacataaaa 217  Q
    ||||||||||    
T  4415 caacataaaa 4424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 10351 - 10152
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||| ||||||| ||||||   | || |||| |||| ||||||||||||||||||||  ||      
T  10351 tttttttgcataaatcagagtaaaacaact-aaacaggatgctacacttttttcaaatatgaatatagtaaaattactatttatttcaatcatcatatgt 10253  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| |||||||||||| || ||||||||| | || | |  |||||||||||| |||||   |||||||||||||||||||||||||||||||| ||||    
T  10252 catca-aattaaatctcattgtagcggaaaacaactaagttcaacatcatgttggcacaatagcctcaacttaaacaacttaataaaaatccagtttaaa 10154  T

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Target: scaffold0328 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 17361 - 17602
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   |||| |||| |||| |||||||||||||||||| |||||       
T  17361 ttttttgcataaatcagagta-aacaactaaaacaggatgctacacttctttcaaatataaatatagtaaaattactatttatttcaatcaactcatgtc 17459  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| | ||||||||||||||||||||||| |  ||||| ||||| | |  || ||||||| ||||||||||||| |||| || ||||||||||||| ||    
T  17460 atca-atttaaatctcaatgcagcggaaaaca--ttaattaaacaacgtaatggcacaacggcctcaacttaaacgactt-attaaaatccagtctagac 17555  T
Q  202 -agtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
     | |||||||||| ||| | ||||||||| | |||||| ||||||||||    
T  17556 aaatcttcaacat-aaattcataataaat-atgtaacacatggaaaaca 17602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 281
Target Start/End: Complemental strand, 1630 - 1430
Alignment:
Q  78 tatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaaca 177  Q
    |||||||||||||||||  ||   |||| |||||||||||| |||||||||||| |  | | |  |||||| ||||| ||||||| ||||||||||||||    
T  1630 tatttatttcaatcatcatatgtcatca-aattaaatctcattgcagcggaaaacaattaagttcaacatcctgttggcacaacggcctcaacttaaaca 1532  T
Q  178 acttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgtatc 276  Q
    ||||| ||||||| |||| ||||| | | |||||||||||| | ||||||||| |||||||| ||||||||||  ||| |||| | ||| ||||||||||    
T  1531 acttattaaaaattcagtttaaacaaatattcaacataaaa-tcataataaat-acgtaacacatggaaaacagcaaa-atccccatcccgttacgtatc 1435  T
Q  277 agagc 281  Q
    |||||    
T  1434 agagc 1430  T

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Target: scaffold0021 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 145314 - 145394
Alignment:
Q  251 taaagatcctcgtcctgttacgtatcagagcacctaagactcatgtgaacagcaactaacagctactactctgcatcacct 331  Q
    ||||||||| | ||| |||||||||||||||||||||||||||| || || |||||||||||| |||||||||||||||||    
T  145314 taaagatccccatcccgttacgtatcagagcacctaagactcatatgtaccgcaactaacagcaactactctgcatcacct 145394  T

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Target: scaffold0021; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 147670 - 147717
Alignment:
Q  330 cttagttttgatgaacaaactcttacacaatcagattctccccctttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  147670 cttagttttgatgaacaaactcttacacaatcagattctccccctttg 147717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 1339 - 1585
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||| ||||||||| || | || |||| ||||| | |||||||| ||| | |||| |||| |||| |||||||||||| |||||||  ||       
T  1339 ttttttgcatagatcagagtaaaacaact-aaacagaatgctgcacttcttacaatcataaatatagtaaaattactatttatttaaatcatcatatgtc 1437  T
Q  102 atcataattaaatctcaatgcagcggaaaat-atcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
    |||| ||||||| |||| ||||||||||||  | || | |  |||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| ||||    
T  1438 atca-aattaaacctcattgcagcggaaaaacaactaagttcaacatcgtgttggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaa 1536  T
Q  201 --cagtcttcaacataaaagttataataaatcacgtaacatatggaaaaca 249  Q
       | |||||||||||||| | || |||||| |||||||| ||||||||||    
T  1537 acaaatcttcaacataaaa-tcatgataaat-acgtaacacatggaaaaca 1585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 281
Target Start/End: Original strand, 2757 - 2959
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    ||||||||||||||||||||||||   |||| |||||||| ||||||||||||||||  | | |||  ||| || | ||| || |||  |||||||||||    
T  2757 tactatttatttcaatcatctcatgtcatca-aattaaatttcaatgcagcggaaaacttttaaattcaacttcgtattggcataaccgcctcaacttaa 2855  T
Q  175 acaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatatggaaaacattaaagatcctcgtcctgttacgt 273  Q
    ||||||| || |||||||||| ||||| | |||||||||||||| | |||||||||   |||||| ||||||||||    | |||| | |||||||||||    
T  2856 acaactt-attaaaatccagtttaaacaaatcttcaacataaaa-tcataataaat--agtaacacatggaaaacaaacgaaatccccatcctgttacgt 2951  T
Q  274 atcagagc 281  Q
    ||||||||    
T  2952 atcagagc 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 1028 - 923
Alignment:
Q  143 aacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac-agtcttcaacataaaagttataataaatcacgtaacatat 241  Q
    |||||||||||| |||||||  |||||||||||||||||| |||||||||||| ||  | | ||||||||||||||| |||||| ||| |||||||| ||    
T  1028 aacatcatgttggcacaacggtctcaacttaaacaacttattaaaaatccagtttacgcaaatcttcaacataaaag-tataatcaat-acgtaacacat 931  T
Q  242 ggaaaaca 249  Q
    ||||||||    
T  930 ggaaaaca 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 128125 - 127913
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||   |||| | || |||  ||||||||||||||||||| ||||       
T  128125 ttttttgcataaatcagagta-aacaactaaaacaggatgctacacttctttcaaatataaatacagtaaagttactatttatttcaatcatttcatgtc 128027  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaac 201  Q
    |||| | |||||||||||||||||| |||| || | | | ||||||| |  || ||||||| |||||||||||||||||| || ||||| ||||||| ||    
T  128026 atca-acttaaatctcaatgcagcgaaaaacatttaatttaaacatcgtaatggcacaacggcctcaacttaaacaactt-attaaaattcagtctagac 127929  T
Q  202 -agtcttcaacataaa 216  Q
     | |||||||||||||    
T  127928 aaatcttcaacataaa 127913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 330482 - 330287
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| |||| || |||| | ||  ||||||||||||||    ||| |||| |||  ||||||| ||||||||||||||||      
T  330482 tttttttgcataaatcagagtaaaataact-aaacaggattctacacttctttcaaatacaaatatagtaaagttactattcatttcaatcatctcatgt 330384  T
Q  101 tatcataattaaatctcaa-tgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtcta 198  Q
     |||| | ||||||||||| |||||||||||| || | |||  |||||| ||||| ||||| | |||||| ||||||||||| || |||||||||||||    
T  330383 catca-atttaaatctcaaatgcagcggaaaacatttaaattcaacatcgtgttggcacaatggcctcaatttaaacaactt-attaaaatccagtcta 330287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 108665 - 108742
Alignment:
Q  109 ttaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaa 188  Q
    |||||||||| |||||||||||| ||  |||| ||||||| |  || ||||||||||||||| |||| |||||| |||||    
T  108665 ttaaatctcattgcagcggaaaacat--taattaaacatcgtaatggcacaacgacctcaacataaataacttattaaaa 108742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 4999 - 5169
Alignment:
Q  2 tttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataat 101  Q
    ||||| ||||||||||||||| || | || |||| | ||| ||||||||||||||    ||| |||| | || || ||||||||||||| ||||||        
T  4999 ttttttgcataaatcagagta-aacaactaaaacaggatgctacacttctttcaaataaaaacatagtagaattattatttatttcaataatctcaagtc 5097  T
Q  102 atcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaa 174  Q
    |||| ||||||||||||||||||||||||| | || | |  |||||||||||| ||||||| |||||||||||    
T  5098 atca-aattaaatctcaatgcagcggaaaacaactaagttcaacatcatgttggcacaacggcctcaacttaa 5169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 171490 - 171293
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| || | || |||| | ||| |||||||| |||||    ||| |||| |||  ||||||| ||||||||||||||||      
T  171490 tttttttgcataaatcagagtaaaacaact-aaacaggatgctacacttcgttcaaatacaaatatagtaaagttactattcatttcaatcatctcatgt 171392  T
Q  101 tatcataattaaatctcaa-tgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaa 199  Q
     |||| | ||||||||||| | |||||||||| || | |||  ||||| |||||| ||||| | |||||| ||||||||||| || ||||||||||||||    
T  171391 catca-atttaaatctcaaatacagcggaaaacatttaaattcaacattatgttggcacaatggcctcaaattaaacaactt-attaaaatccagtctaa 171294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 2175 - 2215
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  2175 aatcagagtaaaacaccttaaacggaatgttacacttcttt 2215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 11651 - 11611
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  11651 aatcagagtaaaacaccttaaacggaatgttacacttcttt 11611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 565 - 758
Alignment:
Q  1 ttttttagcataaatcagagtacaataccttaaacggaatgttacacttctttcaaccgtaaagatagcaaaagtactatttatttcaatcatctcataa 100  Q
    |||||| ||||||||||||||| |  ||  ||||| ||||| ||||||||||||||   |||| |||| |||  ||||||||||| |||||| |||||      
T  565 tttttttgcataaatcagagtaaacaac--taaacagaatgctacacttctttcaaatataaatatagtaaagttactatttatt-caatcaactcatgt 661  T
Q  101 tatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaacttaaacaacttaataaaaatccagtctaaa 200  Q
     |||| | ||||||||||||||||||||| | |  |||||  || ||| |  || ||||||| |||||||||||| |||||| |  ||||||||||||||    
T  662 catca-atttaaatctcaatgcagcggaacaca--ttaatttaatatcgtaatggcacaacggcctcaacttaaataacttatt--aaatccagtctaaa 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 27720 - 27760
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  27720 aatcagagtaaaacaccttaaacggaatgttacacttcttt 27760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 57618 - 57662
Alignment:
Q  10 ataaatcagagtacaataccttaaacggaatgttacacttctttc 54  Q
    ||||||||||||| || ||||||||||||||| ||||||||||||    
T  57618 ataaatcagagtaaaacaccttaaacggaatgctacacttctttc 57662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 66220 - 66180
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  66220 aatcagagtaaaacaccttaaacggaatgttacacttcttt 66180  T

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Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 114269 - 114154
Alignment:
Q  70 aaaagtactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaatatcttaataaaacatcatgttgacacaacgacctcaa 169  Q
    |||| ||||||||||||||| ||||||||   |||| | |||||||||| ||||| |||||| ||  |||| ||||| | |  || ||||| ||||||||    
T  114269 aaaattactatttatttcaaacatctcatgtcatca-atttaaatctcattgcagtggaaaacat--taattaaacaacgtaatggcacaatgacctcaa 114173  T
Q  170 cttaaacaacttaataaaa 188  Q
    | |||||||||||||||||    
T  114172 cataaacaacttaataaaa 114154  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 138707 - 138667
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  138707 aatcagagtaaaacaccttaaacggaatgttacacttcttt 138667  T

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Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 24993 - 25033
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||| ||||||||||||||    
T  24993 aatcagagtaaaacaccttaaacggattgttacacttcttt 25033  T

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Target: scaffold0090 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 16856 - 16906
Alignment:
Q  231 acgtaacatatggaaaacattaaagatcctcgtcctgttacgtatcagagc 281  Q
    |||||||| |||||||||| | ||||||||| ||| |||||||||||||||    
T  16856 acgtaacacatggaaaacaatcaagatcctcatcccgttacgtatcagagc 16906  T

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Target: scaffold0842 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 4562 - 4599
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttc 50  Q
    |||||||||| || ||||||||||||||||||||||||    
T  4562 aatcagagtaaaacaccttaaacggaatgttacacttc 4599  T

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Target: scaffold0381 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 14562 - 14529
Alignment:
Q  298 aacagcaactaacagctactactctgcatcacct 331  Q
    ||||||||||| ||||||||||||||||||||||    
T  14562 aacagcaactatcagctactactctgcatcacct 14529  T

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Target: scaffold0599 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 3618 - 3658
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||||||| ||||||||||||    
T  3618 aatcagagtaaaacaccttaaacggaatattacacttcttt 3658  T

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Target: scaffold0445 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 3594 - 3539
Alignment:
Q  75 tactatttatttcaatcatctcataatatcataattaaatctcaatgcagcggaaaa 131  Q
    ||||||||||||||| ||||||||  ||||| | | |||||||||||||||||||||    
T  3594 tactatttatttcaaacatctcatgttatca-attcaaatctcaatgcagcggaaaa 3539  T

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Target: scaffold0247 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 3618 - 3578
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || || ||||||||||||||||||||||||    
T  3618 aatcagagtaaaacactttaaacggaatgttacacttcttt 3578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 18889 - 18849
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || |||||||||| ||||||||||||||||    
T  18889 aatcagagtaaaacaccttaaacgaaatgttacacttcttt 18849  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 821 - 857
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacactt 49  Q
    |||||||||| || |||||||||||||||||||||||    
T  821 aatcagagtaaaacaccttaaacggaatgttacactt 857  T

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Target: scaffold0180; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 5141 - 5177
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacactt 49  Q
    |||||||||| || |||||||||||||||||||||||    
T  5141 aatcagagtaaaacaccttaaacggaatgttacactt 5177  T

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Target: scaffold0139 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 22398 - 22438
Alignment:
Q  12 aaatcagagtacaataccttaaacggaatgttacacttctt 52  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  22398 aaatcagagtaaaacaccttaaacggaatgtcacacttctt 22438  T

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Target: scaffold0089 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 857 - 893
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacactt 49  Q
    |||||||||| || |||||||||||||||||||||||    
T  857 aatcagagtaaaacaccttaaacggaatgttacactt 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 66519 - 66559
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || ||||||||||||||||||||| |||||    
T  66519 aatcagagtaaaacaccttaaacggaatgttacacatcttt 66559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 14873 - 14833
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || ||||||||| |||||||||||||||||    
T  14873 aatcagagtaaaacaccttaaacagaatgttacacttcttt 14833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 224969 - 224929
Alignment:
Q  13 aatcagagtacaataccttaaacggaatgttacacttcttt 53  Q
    |||||||||| || ||||||||||||||||||||| |||||    
T  224969 aatcagagtaaaacaccttaaacggaatgttacacctcttt 224929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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