View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10391_high_16 (Length: 238)
Name: NF10391_high_16
Description: NF10391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10391_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 38623021 - 38623243
Alignment:
| Q |
1 |
aagttcacattggtgggccctccctagccaccacgtatctttgatgattgtttacgttacgaaacaaacaacaccgaatttggcactgaaattgattact |
100 |
Q |
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| T |
38623021 |
aagttcacattggtgggccctccctagccaccacgtatctttgatgattgtttacgttacgaaacaaacaacaccgaatttggcactgaaattgattact |
38623120 |
T |
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| Q |
101 |
atttatctctacctatctatctagtttttggggttggtaaacatattggatccttccaattttaaatcaaagttgatgtatatgtaatcaatacacaaac |
200 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38623121 |
atctatctctacctatctatctagtttttggggttggtaaacatattggatccttccaattttaaatcaaagttgatgtatatgtaatcaatacacaaac |
38623220 |
T |
|
| Q |
201 |
tttacattagcttttgttgattc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
38623221 |
tttacattagcttttgttgattc |
38623243 |
T |
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