View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10391_low_1 (Length: 870)

Name: NF10391_low_1
Description: NF10391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10391_low_1
NF10391_low_1
[»] chr2 (8 HSPs)
chr2 (162-859)||(2748819-2749515)
chr2 (415-767)||(2733316-2733667)
chr2 (9-162)||(23393437-23393590)
chr2 (1-162)||(24802309-24802471)
chr2 (77-162)||(24815316-24815401)
chr2 (65-162)||(20319437-20319536)
chr2 (65-162)||(20647365-20647461)
chr2 (787-839)||(2714823-2714875)
[»] chr6 (7 HSPs)
chr6 (1-162)||(20634905-20635066)
chr6 (1-162)||(22385988-22386149)
chr6 (4-162)||(17609112-17609271)
chr6 (42-158)||(7587001-7587116)
chr6 (9-162)||(21118993-21119147)
chr6 (42-162)||(21127417-21127536)
chr6 (2-52)||(12953799-12953849)
[»] scaffold0177 (1 HSPs)
scaffold0177 (1-160)||(21140-21299)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-162)||(19745-19907)
[»] chr4 (4 HSPs)
chr4 (1-162)||(33377588-33377749)
chr4 (9-162)||(36210807-36210960)
chr4 (9-159)||(14779141-14779293)
chr4 (65-162)||(18007826-18007922)
[»] chr3 (14 HSPs)
chr3 (1-162)||(15832591-15832752)
chr3 (1-164)||(15848323-15848486)
chr3 (9-162)||(22150429-22150582)
chr3 (25-162)||(11909881-11910018)
chr3 (1-162)||(13147476-13147637)
chr3 (1-159)||(12753438-12753596)
chr3 (1-162)||(45862379-45862536)
chr3 (1-73)||(49989533-49989605)
chr3 (9-162)||(17017214-17017366)
chr3 (65-162)||(51340197-51340294)
chr3 (108-162)||(49989483-49989537)
chr3 (78-162)||(13953482-13953567)
chr3 (42-162)||(41044925-41045045)
chr3 (9-114)||(17006425-17006530)
[»] scaffold0422 (1 HSPs)
scaffold0422 (5-162)||(10915-11073)
[»] chr1 (9 HSPs)
chr1 (1-162)||(17370224-17370385)
chr1 (65-162)||(22018538-22018635)
chr1 (1-162)||(22642043-22642207)
chr1 (9-162)||(23058777-23058930)
chr1 (97-162)||(26549051-26549116)
chr1 (42-162)||(19037190-19037310)
chr1 (78-162)||(21541023-21541108)
chr1 (42-162)||(52351389-52351509)
chr1 (42-162)||(28379172-28379293)
[»] chr8 (11 HSPs)
chr8 (3-162)||(28902643-28902803)
chr8 (2-162)||(21540138-21540298)
chr8 (9-162)||(40002400-40002554)
chr8 (1-151)||(45568732-45568882)
chr8 (39-162)||(21287578-21287701)
chr8 (75-162)||(19460433-19460519)
chr8 (75-162)||(19558111-19558197)
chr8 (78-162)||(17519912-17519996)
chr8 (39-162)||(21298158-21298281)
chr8 (42-162)||(8031230-8031351)
chr8 (2-162)||(29378784-29378944)
[»] chr5 (11 HSPs)
chr5 (2-162)||(25112675-25112835)
chr5 (2-162)||(25171766-25171926)
chr5 (9-162)||(20215920-20216073)
chr5 (65-162)||(32159961-32160058)
chr5 (78-162)||(23487769-23487854)
chr5 (9-162)||(40227838-40227991)
chr5 (2-73)||(23477646-23477717)
chr5 (108-162)||(23477596-23477650)
chr5 (9-162)||(40033542-40033698)
chr5 (9-162)||(13403530-13403685)
chr5 (9-158)||(1914630-1914778)
[»] scaffold1321 (1 HSPs)
scaffold1321 (49-162)||(1727-1840)
[»] scaffold1263 (1 HSPs)
scaffold1263 (49-162)||(1920-2033)
[»] scaffold0220 (1 HSPs)
scaffold0220 (25-162)||(2575-2712)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-162)||(165399-165560)
[»] scaffold0655 (1 HSPs)
scaffold0655 (1-162)||(4297-4461)
[»] scaffold0211 (1 HSPs)
scaffold0211 (29-162)||(272-405)
[»] scaffold1507 (1 HSPs)
scaffold1507 (9-162)||(124-279)
[»] scaffold0132 (1 HSPs)
scaffold0132 (41-162)||(38893-39014)
[»] scaffold0018 (1 HSPs)
scaffold0018 (77-162)||(7290-7375)
[»] chr7 (4 HSPs)
chr7 (9-162)||(11087826-11087979)
chr7 (42-162)||(1559863-1559981)
chr7 (44-160)||(8999752-8999867)
chr7 (570-638)||(40430338-40430406)
[»] scaffold0050 (2 HSPs)
scaffold0050 (91-162)||(34836-34907)
scaffold0050 (2-53)||(34911-34962)
[»] scaffold0017 (2 HSPs)
scaffold0017 (2-162)||(41079-41237)
scaffold0017 (2-156)||(59623-59775)
[»] scaffold0010 (1 HSPs)
scaffold0010 (9-162)||(60914-61067)
[»] scaffold0084 (1 HSPs)
scaffold0084 (83-162)||(1178-1257)
[»] scaffold0570 (1 HSPs)
scaffold0570 (78-162)||(2479-2563)
[»] scaffold1820 (2 HSPs)
scaffold1820 (39-162)||(1017-1140)
scaffold1820 (39-92)||(912-965)
[»] scaffold0771 (1 HSPs)
scaffold0771 (78-162)||(5622-5707)


Alignment Details
Target: chr2 (Bit Score: 670; Significance: 0; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 670; E-Value: 0
Query Start/End: Original strand, 162 - 859
Target Start/End: Original strand, 2748819 - 2749515
Alignment:
Q  162 catatcatttgcttaatgtgggtgcattttatggtatcctttaggcgtatattggactgtgtcttggcatatatgtgggatacaagtcaccattgaagaa 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2748819 catatcatttgcttaatgtgggtgcattttatggtatcctttaggcgtatattggactgtgtcttggcatatatgtgggatacaagtcaccattgaagaa 2748918  T
Q  262 actgacgtgtggcaaagacaattgcagtcaatttgtattgaattttctcaaaatttgaaggcaaaaatcaactttagggctggtgaatttcttagcagct 361  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2748919 actgacgtgtggcaaagacaattgcggtcaatttgtattgaattttctcaaaatttgaaggcaaaaatcaactttagggctggtgaatttcttagcagct 2749018  T
Q  362 gatgaatattcaaagtatcattcaaacgtattccctctgaaatataagtaaaaatatttcaaacgtcaaatggtatttagtctaaaacttgtcttttaaa 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2749019 gatgaatattcaaagtatcattcaaacgtattccctctgaaatataagtaaaaatatttcaaacgtcaaatggtatttagtctaaaacttgtcttttaaa 2749118  T
Q  462 atcacttttaaatattactttttcaatttactgtgaatataattgttgttaaatatatggaaggattaattacagttttggtcattccttctattttcat 561  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2749119 atcacttttaaatattactttttcaatttactgtgaatataattgttgttaaatatatggaaggattaattacagttttgatcattccttctattttcat 2749218  T
Q  562 ttagtcacaaaatttgtcctcctattttaaaatcattcatttttaattcctctttcagattttttaaacttaaaaatgtcgatatatcatattcgaatta 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  2749219 ttagtcacaaaatttgtcctcctattttaaaatcattcatttttaattcctctttcaga-tttttaaacttaaaaatttcgatatatcatattcgaatta 2749317  T
Q  662 aagtttttagagagttttatgataatattaaggttcgtgataattttacagactaggtttcctgctgtaaagtttctgtgttgtttcacctgtgtaacat 761  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2749318 aagtttttagagagttttatgataatattaaggttcgtgataattttacagactaggtttcctgctgtaaagtttctgtgttgtttcacctgtgtaacat 2749417  T
Q  762 atcgtgacaaagattttccattaaaattttgaaattgaacaatgacattaaaatttgaggatgccaaattccttgagagtgagacatttgatgtccat 859  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  2749418 atcgtgacaaagattttccattaaaattttgaaattgaacaatgacattaaaatttgaggatgccaaattacttgagagtgagacatttgatgaccat 2749515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 415 - 767
Target Start/End: Original strand, 2733316 - 2733667
Alignment:
Q  415 atatttcaaacgtcaaatggtatttagtctaaaacttgtcttttaaaatcacttttaaatattactttttcaatttactgtgaatataattgttgttaaa 514  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  2733316 atatttaaaacgtcaa-tggtatttagtctaaaatttgtcttttaaaatcacttttaaatattacttttttaatttattgtgaataaaattgttgttaaa 2733414  T
Q  515 tatatggaaggattaattacagttttggtcattccttctattttcatttagtcacaaaatttgtcctcctattttaaaatcattcatttttaattcctct 614  Q
    ||||| |||||||||||||  ||| |  || ||| |||||| |||| ||| |||||||||| ||||||| ||||||| ||||||||  ||||||||||||    
T  2733415 tatatagaaggattaattatggttctactccttcgttctatattcacttaatcacaaaattggtcctcccattttaagatcattcagctttaattcctct 2733514  T
Q  615 ttcagattttttaaacttaaaaatgtcgat-atatcatattcgaattaaagtttttagagagttttatgataatattaaggttcgtgataattttacaga 713  Q
    |||||  |||||||||||| |||| ||||| |||||||||| ||||||| ||||||||||| |||||||||||| |||| ||| |||||||||||||  |    
T  2733515 ttcag-gtttttaaacttagaaatatcgatcatatcatatttgaattaatgtttttagagaattttatgataattttaatgttggtgataattttacgaa 2733613  T
Q  714 ctaggtttcctgctgtaaagtttctgtgttgtttcacctgtgtaacatatcgtg 767  Q
    | | ||||||||||| ||||||||| |||||||||||   ||||||||||||||    
T  2733614 ccaagtttcctgctgcaaagtttctatgttgtttcacgcttgtaacatatcgtg 2733667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 23393437 - 23393590
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||| |||| || |||||||||||||||||||||||||| |||||||||| ||||| |    
T  23393437 ttttactccgctgcatatccaattctgaattgcacatcagaagcaaatcaagtgcctctgaagtgtcatcacatcagaagcattttcaaacagcttctga 23393536  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| | |||| ||||||| |||||||||||| |||||||||||||||||||    
T  23393537 agtgatttcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 23393590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24802309 - 24802471
Alignment:
Q  1 ttactctgtttt-attccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaac 99  Q
    |||||||||||| | |||||||  |||||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||||||  |||||||||    
T  24802309 ttactctgtttttactccgctgtatatccaattctgaattgcacatcagaagcaaatcaattgcctctgaagtgtcatgacatcagaagtattttcaaac 24802408  T
Q  100 aacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    | ||||| ||||||||| |||| ||||||| ||||||||||||  ||||||||||||||||||    
T  24802409 agcttctgaagtgatctcagaagaagattttatcttgagaaaaacaaaacacaattcaacccc 24802471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 24815316 - 24815401
Alignment:
Q  77 tcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||||||| |||||||| | ||||| ||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||    
T  24815316 tcacatcagaagcattttcaaagagcttctgaagtgatctcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 24815401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 20319437 - 20319536
Alignment:
Q  65 tctgaagtgtcatcacatcagaagcg-ttttcaaacaacttctaaagtgatcttagaaaaagatttcatctt-gagaaaatgaaaacacaattcaacccc 162  Q
    |||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||| |||| ||||||| ||||| ||||||| |||||||||||||||||||    
T  20319437 tctgaagtgtaatcacatcagaagcgtttttcaaacagcttctgaagtggtctcagaagaagattttatcttagagaaaaagaaaacacaattcaacccc 20319536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 20647365 - 20647461
Alignment:
Q  65 tctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||| | ||||||||||||||  | ||||||| ||||| ||||||| | |||| |||||||  ||  ||||||| |||||||||||||||||||    
T  20647365 tctgaagtattatcacatcagaagcactctcaaacagcttctgaagtgatatcagaagaagattt-ttcaagagaaaaagaaaacacaattcaacccc 20647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 787 - 839
Target Start/End: Original strand, 2714823 - 2714875
Alignment:
Q  787 attttgaaattgaacaatgacattaaaatttgaggatgccaaattccttgaga 839  Q
    |||||||| |||| || |||||||| ||||||||||||||||||| |||||||    
T  2714823 attttgaagttgagcagtgacattagaatttgaggatgccaaattacttgaga 2714875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 2e-57; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 20635066 - 20634905
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  20635066 ttactctgttttattccgctgcttatcctattctgaactgcacatcagaagcaagtcaattgcttctgaagtgtcatcacatcagaagcgttttcaaaca 20634967  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
     ||||| ||||||||| |||| |||| || |||||||||||| |||||||||||||||||||    
T  20634966 gcttctgaagtgatctcagaagaagaatttatcttgagaaaaagaaaacacaattcaacccc 20634905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22386149 - 22385988
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    ||||||||||||| |||||||||||||| |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22386149 ttactctgttttactccgctgcttatcctattctgaactgcacatcagaagcaagtcaattgcctctgaagtgtcatcacatcagaagcgttttcaaaca 22386050  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
     ||||| ||||||||| |||| |||| || |||||||||||| |||||| ||||||||||||    
T  22386049 gcttctgaagtgatctcagaagaagaatttatcttgagaaaaagaaaactcaattcaacccc 22385988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 17609112 - 17609271
Alignment:
Q  4 ctctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcg-ttttcaaacaac 102  Q
    |||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||  |||||||||| ||||||||||||| | |||| ||||| |    
T  17609112 ctctgttttactccgctgcatatccaattctgaactgcacatcagaagcaagtcaattgcatctgaagtgtaatcacatcagaagtgttttttaaacagc 17609211  T
Q  103 ttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||| ||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||    
T  17609212 ttctgaagtgatctcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 17609271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 7587001 - 7587116
Alignment:
Q  42 acatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaa 141  Q
    ||||||||||||| | |||||  |||||||| | ||||||||||||||  | ||||||||||||| ||||||| | |||| || ||||  | ||||||||    
T  7587001 acatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactctcaaacaacttctgaagtgatatcagaagaatattt-tttttgagaaa 7587099  T
Q  142 atgaaaacacaattcaa 158  Q
    | |||||||||||||||    
T  7587100 aagaaaacacaattcaa 7587116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 21119147 - 21118993
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| ||||| |||||| |    |||||| |||||| | |||||  |||||||| | ||||||||||||||  | ||||||||||||| |    
T  21119147 ttttactccgctgcgtatccgattctgaacaatacatcataagcaatttaattgcatctgaagtattatcacatcagaagcactctcaaacaacttctga 21119048  T
Q  109 agtgatcttagaaaaagatttcatct-tgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| | |||| |||||||  | |  ||||||| |||||||||||||||||||    
T  21119047 agtgatatcagaagaagattttttttcagagaaaaagaaaacacaattcaacccc 21118993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 21127536 - 21127417
Alignment:
Q  42 acatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaa 141  Q
    |||||| |||||| | |||||  |||||| | | || |||||||||||  | ||||||| ||||||||||||| | |||| |||||||  ||  ||||||    
T  21127536 acatcaaaagcaatttaattgcatctgaactattataacatcagaagcactctcaaacagcttctaaagtgatatcagaagaagattttttc-agagaaa 21127438  T
Q  142 atgaaaacacaattcaacccc 162  Q
    | |||||||||||||||||||    
T  21127437 aagaaaacacaattcaacccc 21127417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 12953799 - 12953849
Alignment:
Q  2 tactctgttttattccgctgcttatccaattctgtattgcacatcagaagc 52  Q
    ||||||||||||||||||||| |||||||||||| |   ||||||||||||    
T  12953799 tactctgttttattccgctgcatatccaattctgaacatcacatcagaagc 12953849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 108; Significance: 9e-54; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 21140 - 21299
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    ||||||||||||| |||||||||||||| |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  21140 ttactctgttttactccgctgcttatcctattctgaactgcacatcagaagcaagtcaattgcctctgaagtgtcatcacatcagaagcgttttcaaata 21239  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacc 160  Q
     ||||| ||||||||| |||| |||| || |||||||||||| |||||||||||||||||    
T  21240 gcttctgaagtgatctcagaagaagaatttatcttgagaaaaagaaaacacaattcaacc 21299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 103; Significance: 9e-51; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 19907 - 19745
Alignment:
Q  1 ttactctgtttt-attccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaac 99  Q
    |||||||||||| | |||||||| ||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||    
T  19907 ttactctgtttttactccgctgcatatccaattatgaattgcacatcagaagcaaatcaattgcctctgaagtgtcatcacatcagaagcattttcaaac 19808  T
Q  100 aacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    | ||||| ||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||    
T  19807 atcttctgaagtgatctcagaagaagatttaatcttgagaaaaagaaaacacaattcaacccc 19745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 3e-50; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 33377749 - 33377588
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    |||||||| |||| |||||||| ||| |||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  33377749 ttactctgatttactccgctgcatatacaattctgaactgcacatcagaagcaaatcaattgcctctgaagtgtcatcacatcagaagcgttttcaaaca 33377650  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
     ||||| ||||||||| |||| |||| || |||||||||||| |||||||||||||||||||    
T  33377649 gcttctgaagtgatctcagaagaagaatttatcttgagaaaaagaaaacacaattcaacccc 33377588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 36210807 - 36210960
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||  |||||||||||| | | |||||||||||||| | |||||  |||||||| | ||||||||||||||  | | ||||| ||||| |    
T  36210807 ttttactccgctgtgtatccaattctgaactacacatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactcttaaacagcttctga 36210906  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| | |||| ||||||| |||||||||||| |||||||||||||||||||    
T  36210907 agtgatatcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 36210960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 14779141 - 14779293
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| ||||| |||||| |    ||||||||||||| | |||||  |||||||| | || |||||||||||  | ||||||| ||||| |    
T  14779141 ttttactccgctgcgtatccgattctgaacaatacatcagaagcaatttaattgcatctgaagtattattacatcagaagcactctcaaacagcttctga 14779240  T
Q  109 agtgatcttagaaaaagatttcatctt--gagaaaatgaaaacacaattcaac 159  Q
    |||||| | |||| |||||||  | ||  ||||||| ||||||||||||||||    
T  14779241 agtgatatcagaagaagatttttttttaagagaaaaagaaaacacaattcaac 14779293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 18007826 - 18007922
Alignment:
Q  65 tctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||| | ||||||||||||||  | ||||||| ||||| ||||||| | |||| |||||||  ||  ||||||| |||||||||||||||||||    
T  18007826 tctgaagtattatcacatcagaagcactctcaaacagcttctgaagtgatatcagaagaagattt-ttcaagagaaaaagaaaacacaattcaacccc 18007922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 3e-50; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 15832752 - 15832591
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    |||||||| |||| |||||||| | | |||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15832752 ttactctgctttactccgctgcattttcaattctgaactgcacatcagaagcaagtcaattgcctctgaagtgtcatcacatcagaagcgttttcaaaca 15832653  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
     ||||| ||||||||| |||| |||| || |||||||||||| |||||||||||||||||||    
T  15832652 gcttctgaagtgatctcagaagaagaatttatcttgagaaaaagaaaacacaattcaacccc 15832591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 15848486 - 15848323
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    |||||||| |||| |||||||| | |||||||||| | ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  15848486 ttactctgctttactccgctgcatttccaattctgaactgcacatcagaggcaagtcaattgcctctgaagtgtcatcacatcagaagcgttttaaaaca 15848387  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaaccccat 164  Q
     ||||||||||||||| |||| |||| || |||||||||||| |||||||||||||||| ||||    
T  15848386 gcttctaaagtgatctcagaagaagaatttatcttgagaaaaagaaaacacaattcaacaccat 15848323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 22150582 - 22150429
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| |||||||||||| | |||||||||||||||| |||||||  |||||||||| |||||||||||||| || ||||||| ||||| |    
T  22150582 ttttactccgctgcgtatccaattctgaactgcacatcagaagcaaatcaattgcatctgaagtgttatcacatcagaagcattctcaaacagcttctga 22150483  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||| |||| ||||||| |||||||||||| |||||||||||||||||||    
T  22150482 agtgatctcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 22150429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 11909881 - 11910018
Alignment:
Q  25 atccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaa 124  Q
    ||||||||||| | ||||||||||| ||||||||| || |||||||||||||||||||||||||||||||  |||| ||||| |||||| || |||| ||    
T  11909881 atccaattctgaactgcacatcagatgcaagtcaactgcctctgaagtgtcatcacatcagaagcgtttttcaacagcttctgaagtgacctcagaagaa 11909980  T
Q  125 gatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||| |||||| ||||| |||||||||||||||||||    
T  11909981 gattttatcttgggaaaaagaaaacacaattcaacccc 11910018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 13147637 - 13147476
Alignment:
Q  1 ttactctgtttt-attccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaac 99  Q
    |||||||||||| | |||||||| ||||||||| || ||||||||||||||||||||||||||  | |||||||| |||||||||||||| || | ||||    
T  13147637 ttactctgtttttactccgctgcgtatccaattatgaattgcacatcagaagcaagtcaattgcatatgaagtgttatcacatcagaagcattcttaaac 13147538  T
Q  100 aacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    | ||| | ||||||||| |||| |||||||  | ||||||||| |||||||||||||||||||    
T  13147537 agcttttgaagtgatctcagaagaagattt-tttttgagaaaaagaaaacacaattcaacccc 13147476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 12753438 - 12753596
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    ||||||||||||| |||| ||   ||||  ||||| | || |||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||    
T  12753438 ttactctgttttactccgttgtgcatccttttctgaactgtacatcagaagcaagtcaactgcctctgaagtgtcatcacatcagaagcgtttttcaaca 12753537  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaac 159  Q
      |||| |||||| || |||| ||||||| |||||||||||| ||||||| ||||||||    
T  12753538 gtttctgaagtgacctcagaagaagattttatcttgagaaaaagaaaacataattcaac 12753596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 45862379 - 45862536
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaa-gtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaac 99  Q
    ||||||||||||| |||||||   ||||||||||| | |||||||||||||||| ||||| || |||||||||||||||||||||||||||||||  |||    
T  45862379 ttactctgttttactccgctgtgcatccaattctgaactgcacatcagaagcaaagtcaactgcctctgaagtgtcatcacatcagaagcgtttttcaac 45862478  T
Q  100 aacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |     | |||| | || |||| ||||||| |||||||||||| |||||||||||||||||||    
T  45862479 a-----tgaagtaacctcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 45862536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 49989605 - 49989533
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtg 73  Q
    ||||||||||||| |||||||| |||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  49989605 ttactctgttttactccgctgcatatccaattctgaactgcacatcagaagcaagtcaattgcctctgaagtg 49989533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 17017366 - 17017214
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||  ||||| |||||| | | |||||||||||||| | |||||  |||||||| | ||||||||||||||  | | ||||| ||||| |    
T  17017366 ttttaatccgctgtgtatccgattctgaacttcacatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactcttaaacagcttctga 17017267  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| |||||| ||||| |  | ||| ||||| |||||||||||||||||||    
T  17017266 agtgatattagaagaagatat-tttttgggaaaaagaaaacacaattcaacccc 17017214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 51340294 - 51340197
Alignment:
Q  65 tctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||||| ||||||||  |||| | ||  |||| ||||| |||||| || |||| ||||||| |||||||||||| |||||||||||||||||||    
T  51340294 tctgaagtgttatcacatcgaaagcatctttcaacagcttctgaagtgacctcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 51340197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 49989537 - 49989483
Alignment:
Q  108 aagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||| |||| |||| || |||||||||||| |||||||||||||||||||    
T  49989537 aagtgatctcagaagaagaatttatcttgagaaaaagaaaacacaattcaacccc 49989483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 13953567 - 13953482
Alignment:
Q  78 cacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatctt-gagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||||||||| |  |||| ||||| ||||||  | |||| ||||||| ||||| ||||||| |||||||||||||||||||    
T  13953567 cacatcagaagcgttcttcaacagcttctgaagtgacttcagaagaagattttatcttagagaaaaagaaaacacaattcaacccc 13953482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 41045045 - 41044925
Alignment:
Q  42 acatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaa 141  Q
    ||||||||||||| | || ||  |||||||| | || |||||| ||||  | ||||||| ||||| ||||||| | ||||||||||||  |   ||||||    
T  41045045 acatcagaagcaatttaactgcatctgaagtattattacatcataagcactctcaaacagcttctgaagtgatatcagaaaaagatttttttaagagaaa 41044946  T
Q  142 atgaaaacacaattcaacccc 162  Q
    | |||||||||||||||||||    
T  41044945 aagaaaacacaattcaacccc 41044925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 17006530 - 17006425
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| ||||| |||||| | | || ||||||||||| | |||||  |||||||| | ||||||||||||||  | | ||||| ||||| |    
T  17006530 ttttaatccgctgcgtatccgattctgaacttcatatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactcttaaacagcttctga 17006431  T
Q  109 agtgat 114  Q
    ||||||    
T  17006430 agtgat 17006425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 95; Significance: 5e-46; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 11073 - 10915
Alignment:
Q  5 tctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcg-ttttcaaacaact 103  Q
    ||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||  |||||||||| ||||||| ||||||| |||||||||| ||    
T  11073 tctgttttactccgctgcatatccaattctgaactgcacatcagaagcaagtcaattgcatctgaagtgtaatcacattagaagcgtttttcaaacagct 10974  T
Q  104 tctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||| ||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||    
T  10973 tctgaagtgatctcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 10915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 2e-45; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17370385 - 17370224
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    ||||||||||||| |||||||| ||||||||| |  | ||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  17370385 ttactctgttttactccgctgcatatccaattttaaactgcacctcagaagcaagtcaattgcctctgaagtgtaatcacatcagaagtgttttcaaaca 17370286  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
     ||||| ||||||||| |||| ||| ||| |||||||||||| |||||||||||||||||||    
T  17370285 gcttctgaagtgatctcagaagaagtttttatcttgagaaaaagaaaacacaattcaacccc 17370224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 22018635 - 22018538
Alignment:
Q  65 tctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||||| |||||||||||||| || ||||||| ||||| ||||||||| |||| ||||||| |||||||||||| |||||||||||||| ||||    
T  22018635 tctgaagtgttatcacatcagaagcattctcaaacagcttctgaagtgatctcagaagaagattttatcttgagaaaaagaaaacacaattcaccccc 22018538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22642207 - 22642043
Alignment:
Q  1 ttactctgtttt-attccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaac 99  Q
    |||||||||||| | | |||||| ||||||||| || | |||||||||||||||| |||||||  |||||||||| |||||||||||||| || | |||     
T  22642207 ttactctgtttttacttcgctgcgtatccaattttgaactgcacatcagaagcaaatcaattgcatctgaagtgttatcacatcagaagcattcttaaat 22642108  T
Q  100 aacttctaaagtgatcttagaaaaagatttca--tcttgagaaaatgaaaacacaattcaacccc 162  Q
    | ||||| ||||||||| |||| ||||||  |  | ||||||||| |||||||||||||||||||    
T  22642107 agcttctgaagtgatctcagaagaagattatattttttgagaaaaagaaaacacaattcaacccc 22642043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 23058930 - 23058777
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| ||||| |||||| |    ||||||||||||| | |||||  |||||||| | ||||||||||||||  | ||||||| ||||| |    
T  23058930 ttttactccgctgcgtatccgattctgaacaatacatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactctcaaacagcttctga 23058831  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| | |||| |||||||    | ||||||| |||||||||||||||||||    
T  23058830 agtgatatcagaagaagattttcaatagagaaaaagaaaacacaattcaacccc 23058777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 26549051 - 26549116
Alignment:
Q  97 aacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||| ||||| |||||||||||||| | ||||| || ||||||||| |||||||||||||||||||    
T  26549051 aacagcttctgaagtgatcttagaagaggattttattttgagaaaaagaaaacacaattcaacccc 26549116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 19037310 - 19037190
Alignment:
Q  42 acatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaa 141  Q
    ||||||||||||| | |||||  |||||||| | ||||||||||||||  | ||||||| ||||| ||||||| | |||| |||||||      ||||||    
T  19037310 acatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactctcaaacagcttctgaagtgatatcagaagaagattttcaaaagagaaa 19037211  T
Q  142 atgaaaacacaattcaacccc 162  Q
    | |||||||||||||||||||    
T  19037210 aagaaaacacaattcaacccc 19037190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 21541108 - 21541023
Alignment:
Q  78 cacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatctt-gagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||||||||| |  |||| ||||| ||||||  | |||| ||||||| ||||| ||||||| |||||||||||||||||||    
T  21541108 cacatcagaagcgttcttcaacagcttctgaagtgacttcagaagaagattttatcttagagaaaaagaaaacacaattcaacccc 21541023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 52351389 - 52351509
Alignment:
Q  42 acatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaa 141  Q
    ||||||||||||| | |||||  || ||||| | ||||||||||||||  | ||||||| ||||| ||||||| | |||| |||||||  |   ||||||    
T  52351389 acatcagaagcaatttaattgcatcagaagtattatcacatcagaagcactgtcaaacagcttctgaagtgatatcagaagaagatttttttaagagaaa 52351488  T
Q  142 atgaaaacacaattcaacccc 162  Q
    | ||||||||||||| |||||    
T  52351489 aagaaaacacaattcgacccc 52351509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 28379293 - 28379172
Alignment:
Q  42 acatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttca--tcttgaga 139  Q
    ||||||||||||| | |||||  |||||||| | ||||||||||||||  | | ||||| ||||| | ||||| | |||| |||| ||||  | ||||||    
T  28379293 acatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactcttaaacagcttctgatgtgatatcagaagaaga-ttcattttttgaga 28379195  T
Q  140 aaatgaaaacacaattcaacccc 162  Q
    ||| |||||||||||||||||||    
T  28379194 aaaagaaaacacaattcaacccc 28379172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 2e-42; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 28902803 - 28902643
Alignment:
Q  3 actctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaac 102  Q
    ||||||||||| |||||||||||| | |||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |    
T  28902803 actctgttttactccgctgcttattctattctgaactgcacatcagaagcaagtcaactgcctctgaagtgtcatcacatcagaagcgttttcaaatagc 28902704  T
Q  103 ttctaaagtgatcttagaa-aaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||| ||||||||| |||| ||| ||||  | ||||||||| |||||||||||||||||||    
T  28902703 ttctgaagtgatctcagaagaaaaatttatttttgagaaaaagaaaacacaattcaacccc 28902643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 21540298 - 21540138
Alignment:
Q  2 tactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaa 101  Q
    |||||||||||| ||||||    |||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| ||||     
T  21540298 tactctgttttactccgctatgcatcctattctgaactgcacatcagaagcaagtcaactgcttctgaagtgtcatcacatcagaagcgttttccaacag 21540199  T
Q  102 cttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
     |||| |||||| || |||| ||||||| |||||||||||| |||||||||||||||||||    
T  21540198 attctgaagtgacctcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 21540138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 40002554 - 40002400
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||| || ||||  |||||||||| |||||||||||||| || | ||||| ||||| |    
T  40002554 ttttactccgctgcgtatccaattctgaattgcacatcagaagcaaatccattgcatctgaagtgttatcacatcagaagcattcttaaacagcttctga 40002455  T
Q  109 agtgatct-tagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||  |||| ||||||| || ||||||||| |||||||||||||||||||    
T  40002454 agtgatctcaagaagaagattttatattgagaaaaagaaaacacaattcaacccc 40002400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 45568732 - 45568882
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    ||||||||||||| |||||||   ||||||||||| | ||||||||||||||||||||| || ||| |||||||||||| ||||||||| ||||  ||||    
T  45568732 ttactctgttttactccgctgtgcatccaattctgaactgcacatcagaagcaagtcaactgcctcagaagtgtcatcatatcagaagcatttttcaaca 45568831  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacac 151  Q
     ||| | |||||| || |||| ||||||| |||||| ||||| ||||||||    
T  45568832 gcttttgaagtgacctcagaagaagattttatcttgggaaaaagaaaacac 45568882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 21287701 - 21287578
Alignment:
Q  39 tgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgag 138  Q
    |||||||||||||||| |||| ||  ||||||||||||||||||| |||||||| |  ||||  ||||  ||||| || |||| ||||||| |||||| |    
T  21287701 tgcacatcagaagcaattcaactgcttctgaagtgtcatcacatcggaagcgttcttcaacagtttctggagtgacctcagaagaagattttatcttggg 21287602  T
Q  139 aaaatgaaaacacaattcaacccc 162  Q
    |||| |||||||||||||||||||    
T  21287601 aaaaagaaaacacaattcaacccc 21287578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 19460519 - 19460433
Alignment:
Q  75 catcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||||||||||  | ||||||| ||||||||||||| | |||| |||||||  | ||||||||| |||||||||||||||||||    
T  19460519 catcacatcagaagcactctcaaacagcttctaaagtgatatcagaagaagattt-tttttgagaaaaagaaaacacaattcaacccc 19460433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 19558197 - 19558111
Alignment:
Q  75 catcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||||||||||  | ||||||| ||||||||||||| | |||| |||||||  | ||||||||| |||||||||||||||||||    
T  19558197 catcacatcagaagcactctcaaacagcttctaaagtgatatcagaagaagattt-tttttgagaaaaagaaaacacaattcaacccc 19558111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 17519912 - 17519996
Alignment:
Q  78 cacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||||| |||| || | ||||| ||||| ||||||||| |||| |||||||  | ||||||||| |||||||||||||||||||    
T  17519912 cacatcataagcattcttaaacagcttctgaagtgatctcagaagaagattttttattgagaaaaagaaaacacaattcaacccc 17519996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 21298281 - 21298158
Alignment:
Q  39 tgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgag 138  Q
    |||||||||||||||| |||| ||  |||| |||||| |||||||||||||||| |  ||||  |||  |||| | || |||| ||||||| |||||| |    
T  21298281 tgcacatcagaagcaattcaactgcttctggagtgtcttcacatcagaagcgttcttcaacagtttccgaagtaacctcagaagaagattttatcttggg 21298182  T
Q  139 aaaatgaaaacacaattcaacccc 162  Q
    |||| ||||||| |||| ||||||    
T  21298181 aaaaagaaaacataattaaacccc 21298158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 8031351 - 8031230
Alignment:
Q  42 acatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatctt---gag 138  Q
    ||||||||||||| | |||||| |||||||| | ||| ||||||||||  | ||||||| ||||| ||||||| | |||| |||||||  | ||   |||    
T  8031351 acatcagaagcaatttaattgtatctgaagtattatctcatcagaagcactctcaaacagcttctgaagtgatatcagaagaagattt--ttttaaagag 8031254  T
Q  139 aaaatgaaaacacaattcaacccc 162  Q
    |||| |||||||||||||||||||    
T  8031253 aaaaagaaaacacaattcaacccc 8031230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 29378944 - 29378784
Alignment:
Q  2 tactctgtt-ttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    ||||||||| ||| ||| |||| ||||| |||||| | | ||||| |||||||| | |||||  |||||||| | ||||||||| ||||  | | |||||    
T  29378944 tactctgttgttaatccactgcgtatccgattctgaacttcacataagaagcaatttaattgcatctgaagtattatcacatcaaaagcactcttaaaca 29378845  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| ||||||| | |||| |||  ||  | |||| |||| |||||||||||||||||||    
T  29378844 acttctgaagtgatatcagaagaagtattttttttga-aaaaagaaaacacaattcaacccc 29378784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 2e-42; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 25112675 - 25112835
Alignment:
Q  2 tactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaa 101  Q
    |||||| |||||||||| ||   |||| ||| || | ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||     
T  25112675 tactctattttattccgttgtgcatcctattatgaactgcacatcagaagtaagtcaattgcctctgaagtgtcatcacatcagaagcattttcaaacag 25112774  T
Q  102 cttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||| |||||| || |||| |||||||||||||||||||| |||||||||||||||||||    
T  25112775 cttctgaagtgacctcagaagaagatttcatcttgagaaaaagaaaacacaattcaacccc 25112835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 25171766 - 25171926
Alignment:
Q  2 tactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaa 101  Q
    |||||| |||||||||| ||   |||| ||| || | ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||     
T  25171766 tactctattttattccgttgtgcatcctattatgaactgcacatcagaagtaagtcaattgcctctgaagtgtcatcacatcagaagcattttcaaacag 25171865  T
Q  102 cttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||| |||||| || |||| |||||||||||||||||||| |||||||||||||||||||    
T  25171866 cttctgaagtgacctcagaagaagatttcatcttgagaaaaagaaaacacaattcaacccc 25171926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 20215920 - 20216073
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| |||||||||||| | | |||||||||||||| | |||||  |||||||| | ||||||||||||||  | |  |||| ||||| |    
T  20215920 ttttactccgctgcgtatccaattctgaactacacatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactctttaacagcttctga 20216019  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| | |||| ||||||| |||||||||||| |||||||||||||||||||    
T  20216020 agtgatatcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 20216073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 32160058 - 32159961
Alignment:
Q  65 tctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||||||||||||||||||||||||  |||| ||||| |||||| || |||| ||||||| |||||| ||||| |||||||||||||||||||    
T  32160058 tctgaagtgtcatcacatcagaagcgtttttcaacagcttctgaagtgacctcagaagaagattttatcttgggaaaaagaaaacacaattcaacccc 32159961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 23487854 - 23487769
Alignment:
Q  78 cacatcagaagcgtttt-caaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||||||||||| |||||| ||||| ||||||||| |||| ||||||| || ||||||||| |||||||||||||||||||    
T  23487854 cacatcagaagcgtttttcaaacagcttcttaagtgatctcagaagaagattttatattgagaaaaagaaaacacaattcaacccc 23487769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 40227991 - 40227838
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| ||||| |||||| |   |||||||||| ||| | |||||  |||||||| | || |||||||||||  | | ||||| ||||| |    
T  40227991 ttttactccgctgcgtatccgattctgaacaacacatcagaaacaatttaattgcatctgaagtattattacatcagaagcactcttaaacagcttctga 40227892  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| | |||| ||||||   | ||||||||| |||||||||||||||||||    
T  40227891 agtgatatcagaagaagattcatttttgagaaaaagaaaacacaattcaacccc 40227838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 23477717 - 23477646
Alignment:
Q  2 tactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtg 73  Q
    |||||||||||| |||||||| |||||  ||||| | |||||||||||||||||||| |||  |||||||||    
T  23477717 tactctgttttactccgctgcatatccttttctgaactgcacatcagaagcaagtcatttgcatctgaagtg 23477646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 23477650 - 23477596
Alignment:
Q  108 aagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||||||||| ||||||| || ||||||| | |||||||||||||||||||    
T  23477650 aagtgatcttagaagaagattttatattgagaacaagaaaacacaattcaacccc 23477596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 40033542 - 40033698
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| ||||| |||||| |    ||||||||||||| | |||||  |||||||| | ||||||||||||||  | | ||||| |||||||    
T  40033542 ttttactccgctgcgtatccgattctgaacaatacatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactcttaaacagcttctaa 40033641  T
Q  109 agtgatcttagaaaaagat---ttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| | |||| |||||   ||  | || |||||| |||||||||||||||||||    
T  40033642 agtgatatcagaagaagattcatttttttttagaaaaagaaaacacaattcaacccc 40033698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 13403685 - 13403530
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| ||||| |||||| |    ||||||||||||| | |||||  |||||||| | || |||||||||||  | ||||||| ||||| |    
T  13403685 ttttactccgctgcgtatccgattctgaacaatacatcagaagcaatttaattgcatctgaagtattattacatcagaagcactctcaaacagcttctga 13403586  T
Q  109 agtgatcttagaaaaagatttcatctt--gagaaaatgaaaacacaattcaacccc 162  Q
    ||| || | |||| |||||||  | ||  ||||||| |||||||||||||||||||    
T  13403585 agtaatatcagaagaagatttttttttaagagaaaaagaaaacacaattcaacccc 13403530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 1914778 - 1914630
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| ||||| |||||| |    ||||||||||||| | |||||  |||||||| | ||||||||||||||  | |  |||| ||||| |    
T  1914778 ttttactccgctgcgtatccgattctgaacaatacatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactcttcaacagcttctga 1914679  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaa 158  Q
    |||||| | |||| |||||||  | |||||||||  ||||||||||||||    
T  1914678 agtgatatcagaataagattt-tttttgagaaaaaaaaaacacaattcaa 1914630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 1727 - 1840
Alignment:
Q  49 aagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaa 148  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||| ||||||| |||||||||||| |||||    
T  1727 aagcaaatcaattgcctctgaagtgtcatcacatcagaagcattttcaaacagcttctgaagtgatctcagaagaagattttatcttgagaaaaagaaaa 1826  T
Q  149 cacaattcaacccc 162  Q
    ||||||||||||||    
T  1827 cacaattcaacccc 1840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 1920 - 2033
Alignment:
Q  49 aagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaa 148  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||| ||||||| |||||||||||| |||||    
T  1920 aagcaaatcaattgcctctgaagtgtcatcacatcagaagcattttcaaacagcttctgaagtgatctcagaagaagattttatcttgagaaaaagaaaa 2019  T
Q  149 cacaattcaacccc 162  Q
    ||||||||||||||    
T  2020 cacaattcaacccc 2033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 2575 - 2712
Alignment:
Q  25 atccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaa 124  Q
    ||||||||||| | | ||||||||||||||||||| || |||||||||||||||||||||||||||||||  |||| ||||| |||||| || |||| ||    
T  2575 atccaattctgaactacacatcagaagcaagtcaactgcctctgaagtgtcatcacatcagaagcgtttttcaacagcttctgaagtgacctcagaagaa 2674  T
Q  125 gatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||| |||||| ||||| |||||||||||||||||||    
T  2675 gattttatcttgggaaaaagaaaacacaattcaacccc 2712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 165399 - 165560
Alignment:
Q  1 ttactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaaca 100  Q
    ||||||| ||||| |||||||   ||||||||||| | ||||||||||||||||||||| || |||| ||||||||||||||||||| | ||||  ||||    
T  165399 ttactctattttactccgctgtgcatccaattctgaactgcacatcagaagcaagtcaactgcctctcaagtgtcatcacatcagaatcatttttcaaca 165498  T
Q  101 acttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
     ||||| |||||| || |||| ||||||| |||||| ||||| |||||||||||||||||||    
T  165499 gcttctgaagtgacctcagaagaagattttatcttgggaaaaagaaaacacaattcaacccc 165560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4461 - 4297
Alignment:
Q  1 ttactctgtttt-attccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaac 99  Q
    |||||||||||| | |||||||| |||||||||||| |||||||||||||||||| |||||||  |||||||||| |||||||||||||| || | ||||    
T  4461 ttactctgtttttactccgctgcgtatccaattctgaattgcacatcagaagcaaatcaattgcatctgaagtgttatcacatcagaagcattcttaaac 4362  T
Q  100 aacttctaaagtgatcttagaaaaagatttca--tcttgagaaaatgaaaacacaattcaacccc 162  Q
    | ||||| ||||||| | |||| ||||||  |  | ||||||||| |||||||||||||||||||    
T  4361 agcttctgaagtgatatcagaagaagattatattttttgagaaaaagaaaacacaattcaacccc 4297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 272 - 405
Alignment:
Q  29 aattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatt 128  Q
    ||||||| | ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||  |||| ||||| |||||| || |||| ||||||    
T  272 aattctgaactgcacatcagaagcaagtcaactgcctctgaagtttcatcacatcagaagcgtttttcaacagcttctgaagtgacctcagaagaagatt 371  T
Q  129 tcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    | |||||| ||||| |||| ||||||||||||||    
T  372 ttatcttgggaaaaagaaagcacaattcaacccc 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1507 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 124 - 279
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| |||||||||||  |||||||||||||||||| |||||||  |||||||||| |||||||||||||| || | ||||| ||||| |    
T  124 ttttactccgctgcgtatccaattctaaattgcacatcagaagcaaatcaattgcatctgaagtgttatcacatcagaagcattcttaaacagcttctga 223  T
Q  109 agtgatcttagaaaaagatttca--tcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| | |||| ||||||  |  | ||||||||| |||||||||||||||||||    
T  224 agtgatatcagaagaagattatattttttgagaaaaagaaaacacaattcaacccc 279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 38893 - 39014
Alignment:
Q  41 cacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaa 140  Q
    |||||||||||||| |||| ||  || |||||||||||||||||||||||||||  ||||  |||| |||||| || |||| ||||||| || ||| |||    
T  38893 cacatcagaagcaattcaactgcttcagaagtgtcatcacatcagaagcgtttttcaacagtttctgaagtgacctcagaagaagattttattttgggaa 38992  T
Q  141 aatgaaaacacaattcaacccc 162  Q
    || |||||||||||||||||||    
T  38993 aaagaaaacacaattcaacccc 39014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 7290 - 7375
Alignment:
Q  77 tcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||||||| |||||||| | ||||| ||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||    
T  7290 tcacatcagaagcattttcaaagagcttctgaagtgatctcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 7375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 11087826 - 11087979
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| |||||||||||| | |  ||||||||||||| | |||||  |||||||| | ||||||||||||||  | | ||||| ||||| |    
T  11087826 ttttactccgctgcgtatccaattctgaactttacatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactcttaaacagcttctga 11087925  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||| | |||| ||||||| || ||||||||| ||||||| |||||||||||    
T  11087926 agtgatatcagaagaagattttatattgagaaaaagaaaacaaaattcaacccc 11087979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 1559863 - 1559981
Alignment:
Q  42 acatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaa 141  Q
    ||||||||||||| | |||||  |||||||| | ||||||||||||||  | ||||||| ||||| ||||||| | |||| |||||||  |  | |||||    
T  1559863 acatcagaagcaatttaattgcatctgaagtattatcacatcagaagcactctcaaacagcttctgaagtgatatcagaagaagattt--ttctaagaaa 1559960  T
Q  142 atgaaaacacaattcaacccc 162  Q
    | |||||||||||||||||||    
T  1559961 aagaaaacacaattcaacccc 1559981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 8999752 - 8999867
Alignment:
Q  44 atcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaat 143  Q
    ||||||||||| | |||||  |||||||| | ||||||||||||||  | ||||||| ||||| ||||||| | |||| |||||||  |   |||||||     
T  8999752 atcagaagcaatttaattgcatctgaagtattatcacatcagaagcactgtcaaacagcttctgaagtgatatcagaagaagattt-tttaagagaaaaa 8999850  T
Q  144 gaaaacacaattcaacc 160  Q
    |||||||||||||||||    
T  8999851 gaaaacacaattcaacc 8999867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 570 - 638
Target Start/End: Complemental strand, 40430406 - 40430338
Alignment:
Q  570 aaaatttgtcctcctattttaaaatcattcatttttaattcctctttcagattttttaaacttaaaaat 638  Q
    |||||| ||| ||||||||||||||||   | ||||||||||| ||||| ||||||| |||||||||||    
T  40430406 aaaattggtcgtcctattttaaaatcacatagttttaattcctttttcatatttttttaacttaaaaat 40430338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 48; Significance: 6e-18; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 34907 - 34836
Alignment:
Q  91 ttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||||| ||||| ||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||    
T  34907 ttttcaaacagcttctgaagtgatctcagaagaagatttgatcttgagaaaaagaaaacacaattcaacccc 34836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 34962 - 34911
Alignment:
Q  2 tactctgttttattccgctgcttatccaattctgtattgcacatcagaagca 53  Q
    |||||||||||| |||||||| |||||||||||| | |||||||||||||||    
T  34962 tactctgttttactccgctgcatatccaattctgaactgcacatcagaagca 34911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 41079 - 41237
Alignment:
Q  2 tactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaa 101  Q
    |||||||||||| |||||||| ||||  |||||| |    |||||| |||||| | |||||  |||||||| | ||||||||||||||  | |||||||     
T  41079 tactctgttttactccgctgcgtatcagattctgaacaatacatcataagcaatttaattgcatctgaagtattatcacatcagaagcactctcaaacag 41178  T
Q  102 cttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    | ||||||||||| | |||| |||||||  | ||||||||| |||||||||||||||||||    
T  41179 cctctaaagtgatatcagaagaagattt--ttttgagaaaaagaaaacacaattcaacccc 41237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 59623 - 59775
Alignment:
Q  2 tactctgttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaa 101  Q
    |||||||||||| |||||||| ||||  |||||| |    |||||| |||||| | |||||  |||||||| | ||||||||||||||  | |||||||     
T  59623 tactctgttttactccgctgcgtatcagattctgaacaatacatcaaaagcaatttaattgcatctgaagtattatcacatcagaagcactctcaaacag 59722  T
Q  102 cttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattc 156  Q
    ||||| ||||||| | |||| |||||||  |  |||||||| |||||||||||||    
T  59723 cttctgaagtgatatcagaagaagattt--ttctgagaaaaagaaaacacaattc 59775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 61067 - 60914
Alignment:
Q  9 ttttattccgctgcttatccaattctgtattgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaa 108  Q
    ||||| |||||||| ||||| |||||| |   ||||| || ||||| | |||||  |||||||| | ||||||||||||||  | | ||||| |||||||    
T  61067 ttttactccgctgcgtatccgattctgaacaacacataaggagcaatttaattgcatctgaagtattatcacatcagaagcactcttaaacagcttctaa 60968  T
Q  109 agtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||| |||| |||||||  | |||| |||| |||||||||||||||||||    
T  60967 agtgatctcagaataagatttttttttgacaaaaagaaaacacaattcaacccc 60914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 1178 - 1257
Alignment:
Q  83 cagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||||||  |||| ||||| |||||| || |||| ||||||| |||||||||||| |||||||||||||||||||    
T  1178 cagaagcgtttttcaacagcttctgaagtgacctcagaagaagattttatcttgagaaaaagaaaacacaattcaacccc 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 2479 - 2563
Alignment:
Q  78 cacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgagaaaatgaaaacacaattcaacccc 162  Q
    |||||||||||| || | ||||| ||||| ||||||||| |||| |||||||  | ||||||||| |||||||||||||||||||    
T  2479 cacatcagaagcattcttaaacagcttctgaagtgatctcagaagaagattttttattgagaaaaagaaaacacaattcaacccc 2563  T

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Target: scaffold1820 (Bit Score: 36; Significance: 0.00000000008; HSPs: 2)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 1140 - 1017
Alignment:
Q  39 tgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatcttgag 138  Q
    |||||||||||||||| |||| ||  |||| |||||| |||||||||||||||| |  ||||  |||  |||| | || |||| ||||||| |||||| |    
T  1140 tgcacatcagaagcaattcaactgcttctggagtgtcttcacatcagaagcgttcttcaacagtttccgaagtaacctcagaagaagattttatcttggg 1041  T
Q  139 aaaatgaaaacacaattcaacccc 162  Q
    |||| ||||||| |||| ||||||    
T  1040 aaaaagaaaacataattaaacccc 1017  T

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Target: scaffold1820; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 965 - 912
Alignment:
Q  39 tgcacatcagaagcaagtcaattgtctctgaagtgtcatcacatcagaagcgtt 92  Q
    |||||||||||||||| |||| ||  |||| |||||| ||||||||||||||||    
T  965 tgcacatcagaagcaattcaactgcttctggagtgtcttcacatcagaagcgtt 912  T

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Target: scaffold0771 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 5707 - 5622
Alignment:
Q  78 cacatcagaagcgttttcaaacaacttctaaagtgatcttagaaaaagatttcatctt-gagaaaatgaaaacacaattcaacccc 162  Q
    ||||||||||||||| |  |||| ||||| ||||||  | |||| ||||||| ||||| ||||||| |||||||||||||||||||    
T  5707 cacatcagaagcgttcttcaacagcttctgaagtgacttcagaagaagattttatcttagagaaaaagaaaacacaattcaacccc 5622  T

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