View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10391_low_20 (Length: 249)
Name: NF10391_low_20
Description: NF10391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10391_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 10417701 - 10417939
Alignment:
| Q |
1 |
agcattaattggaaaacaaaataagtaggataagaaatgcgatgggttcatggagtctggttagttgagagacaaaaatctaattttaaggtgacaaaat |
100 |
Q |
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| T |
10417701 |
agcattaattggaaaacaaaataagtaggataagaaatgcgatgtgtttatggagtctggttagttgagagacaaaaatctaattttaaggtgacaaaat |
10417800 |
T |
|
| Q |
101 |
ggatccatctgtacatatcccatctaacccatcttaagcaaaatctatataaaattcatccatcaaacaagaaaaatctaaaatacctgaattcaatcca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10417801 |
ggatccatctgtacatatcccatctaacccatcttaagcaaaatctatataaaattcatccatcaaacaagaaaaatctaaaatacctgaattcaatcca |
10417900 |
T |
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| Q |
201 |
tacatttaacaccaaagattattttgaatccaccctttg |
239 |
Q |
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| |||||||| |||||||||||||||||||||||||||| |
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| T |
10417901 |
tccatttaacgccaaagattattttgaatccaccctttg |
10417939 |
T |
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