View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10391_low_21 (Length: 248)

Name: NF10391_low_21
Description: NF10391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10391_low_21
NF10391_low_21
[»] chr5 (68 HSPs)
chr5 (1-230)||(26414865-26415095)
chr5 (26-225)||(13634708-13634908)
chr5 (27-227)||(36392195-36392395)
chr5 (26-221)||(7544133-7544329)
chr5 (25-226)||(28279522-28279725)
chr5 (29-216)||(16938479-16938667)
chr5 (29-230)||(4373608-4373810)
chr5 (73-227)||(37606940-37607093)
chr5 (67-216)||(9856919-9857068)
chr5 (73-227)||(37779150-37779302)
chr5 (37-227)||(2550397-2550588)
chr5 (27-221)||(20146917-20147116)
chr5 (73-227)||(37551453-37551604)
chr5 (73-227)||(37654283-37654434)
chr5 (37-236)||(36363040-36363240)
chr5 (74-199)||(10072720-10072845)
chr5 (59-230)||(9798654-9798826)
chr5 (27-227)||(10476024-10476227)
chr5 (107-226)||(17024270-17024389)
chr5 (31-226)||(16501836-16502034)
chr5 (28-226)||(20513491-20513682)
chr5 (27-222)||(14681468-14681661)
chr5 (37-175)||(11756886-11757024)
chr5 (90-223)||(8502884-8503017)
chr5 (37-228)||(10650435-10650614)
chr5 (23-150)||(40815291-40815418)
chr5 (31-193)||(42681450-42681618)
chr5 (21-100)||(1657985-1658065)
chr5 (25-100)||(14245084-14245160)
chr5 (31-141)||(22022849-22022963)
chr5 (26-160)||(10204573-10204708)
chr5 (30-116)||(13634867-13634954)
chr5 (26-151)||(15986745-15986871)
chr5 (29-100)||(14245218-14245290)
chr5 (31-150)||(34980812-34980932)
chr5 (27-105)||(11436937-11437016)
chr5 (29-150)||(14684604-14684728)
chr5 (26-166)||(33744299-33744440)
chr5 (31-116)||(7544292-7544378)
chr5 (156-226)||(14245134-14245204)
chr5 (170-227)||(1657955-1658012)
chr5 (73-130)||(11419303-11419360)
chr5 (119-227)||(29002251-29002359)
chr5 (126-235)||(43504-43615)
chr5 (67-150)||(5688452-5688535)
chr5 (131-230)||(32727819-32727918)
chr5 (37-99)||(36363205-36363268)
chr5 (27-116)||(16938635-16938725)
chr5 (144-197)||(22023483-22023537)
chr5 (29-97)||(10476203-10476272)
chr5 (185-226)||(10650475-10650516)
chr5 (29-66)||(11437149-11437186)
chr5 (32-100)||(11757075-11757144)
chr5 (29-100)||(33744193-33744265)
chr5 (29-99)||(10650587-10650658)
chr5 (29-151)||(21580947-21581070)
chr5 (26-69)||(40305869-40305912)
chr5 (67-121)||(2550391-2550445)
chr5 (27-100)||(8502833-8502907)
chr5 (31-160)||(8551530-8551660)
chr5 (85-151)||(39966073-39966139)
chr5 (29-66)||(5688597-5688634)
chr5 (27-151)||(10043250-10043375)
chr5 (75-148)||(13298313-13298386)
chr5 (21-54)||(35176756-35176789)
chr5 (29-92)||(37551585-37551649)
chr5 (29-92)||(37654415-37654479)
chr5 (29-69)||(40305670-40305710)
[»] chr1 (54 HSPs)
chr1 (25-227)||(40094978-40095182)
chr1 (29-224)||(32951366-32951562)
chr1 (27-226)||(41498402-41498602)
chr1 (29-227)||(30010332-30010531)
chr1 (29-227)||(35349509-35349706)
chr1 (27-236)||(10391870-10392081)
chr1 (26-223)||(38509943-38510141)
chr1 (37-227)||(2858977-2859168)
chr1 (67-228)||(8529838-8529999)
chr1 (27-227)||(12234008-12234209)
chr1 (37-226)||(51597676-51597866)
chr1 (67-216)||(50744336-50744486)
chr1 (73-216)||(45585741-45585884)
chr1 (27-216)||(49946644-49946834)
chr1 (107-216)||(36285630-36285739)
chr1 (29-223)||(26940892-26941077)
chr1 (68-227)||(6563618-6563775)
chr1 (104-227)||(7444571-7444694)
chr1 (74-196)||(44210981-44211103)
chr1 (112-227)||(41676363-41676480)
chr1 (107-203)||(42230617-42230713)
chr1 (26-100)||(30010504-30010579)
chr1 (29-115)||(40094933-40095020)
chr1 (29-161)||(1085601-1085734)
chr1 (134-230)||(20576175-20576269)
chr1 (28-121)||(26324013-26324112)
chr1 (29-100)||(38509894-38509966)
chr1 (31-100)||(12234182-12234252)
chr1 (29-150)||(49832547-49832669)
chr1 (35-99)||(25268437-25268502)
chr1 (27-100)||(35349464-35349536)
chr1 (67-172)||(2470831-2470940)
chr1 (29-96)||(35927988-35928056)
chr1 (157-227)||(28770852-28770920)
chr1 (29-113)||(2858932-2859017)
chr1 (40-100)||(7444489-7444550)
chr1 (29-115)||(41498561-41498649)
chr1 (25-100)||(47261443-47261519)
chr1 (29-151)||(33643268-33643391)
chr1 (155-197)||(43552067-43552109)
chr1 (32-100)||(20576136-20576205)
chr1 (27-79)||(20607410-20607463)
chr1 (37-100)||(35512969-35513033)
chr1 (29-150)||(525221-525344)
chr1 (26-100)||(8529971-8530046)
chr1 (26-69)||(51303381-51303424)
chr1 (25-100)||(1085485-1085562)
chr1 (24-100)||(7444667-7444744)
chr1 (29-97)||(40709292-40709361)
chr1 (32-161)||(40709403-40709532)
chr1 (67-100)||(41676453-41676486)
chr1 (179-230)||(42742460-42742508)
chr1 (67-100)||(44210946-44210979)
chr1 (29-69)||(20607223-20607263)
[»] chr3 (59 HSPs)
chr3 (25-230)||(24560213-24560419)
chr3 (27-227)||(41110366-41110567)
chr3 (25-227)||(21773778-21773981)
chr3 (25-227)||(30200133-30200343)
chr3 (37-180)||(14897984-14898128)
chr3 (27-227)||(25655015-25655218)
chr3 (59-214)||(41040008-41040164)
chr3 (37-227)||(220442-220633)
chr3 (29-227)||(37102194-37102383)
chr3 (27-221)||(9312522-9312715)
chr3 (67-215)||(2387817-2387965)
chr3 (102-230)||(16275747-16275875)
chr3 (27-216)||(18654656-18654847)
chr3 (38-216)||(27541987-27542166)
chr3 (29-171)||(28582610-28582753)
chr3 (37-227)||(52473923-52474114)
chr3 (77-237)||(37807129-37807289)
chr3 (73-221)||(52185060-52185207)
chr3 (26-227)||(651737-651929)
chr3 (37-175)||(46204894-46205033)
chr3 (67-227)||(46556182-46556344)
chr3 (108-230)||(36568946-36569067)
chr3 (31-197)||(43005814-43005981)
chr3 (80-237)||(55327422-55327579)
chr3 (85-216)||(10748346-10748484)
chr3 (29-224)||(40463919-40464115)
chr3 (24-150)||(54574483-54574605)
chr3 (29-100)||(24253894-24253966)
chr3 (37-227)||(12790381-12790572)
chr3 (26-100)||(34641162-34641237)
chr3 (18-150)||(6803323-6803456)
chr3 (29-116)||(24560373-24560461)
chr3 (45-100)||(26135969-26136025)
chr3 (26-96)||(28581183-28581254)
chr3 (37-150)||(10943736-10943850)
chr3 (31-100)||(41110323-41110393)
chr3 (129-227)||(13082899-13083005)
chr3 (37-100)||(55428551-55428615)
chr3 (25-151)||(44412357-44412484)
chr3 (27-148)||(17474330-17474452)
chr3 (25-95)||(24253717-24253789)
chr3 (66-167)||(37236961-37237061)
chr3 (112-169)||(51819228-51819285)
chr3 (47-99)||(52474088-52474141)
chr3 (29-100)||(18654600-18654672)
chr3 (32-151)||(21090192-21090312)
chr3 (27-166)||(41414076-41414216)
chr3 (77-161)||(42699723-42699807)
chr3 (37-95)||(27541939-27541998)
chr3 (67-166)||(40858604-40858703)
chr3 (119-154)||(44302942-44302977)
chr3 (37-96)||(51819147-51819206)
chr3 (68-166)||(54996786-54996881)
chr3 (26-83)||(5903546-5903604)
chr3 (107-141)||(31684365-31684399)
chr3 (29-97)||(25654971-25655039)
chr3 (67-116)||(30200127-30200176)
chr3 (67-116)||(37102188-37102237)
chr3 (167-227)||(28581231-28581291)
[»] scaffold0067 (2 HSPs)
scaffold0067 (27-227)||(39232-39436)
scaffold0067 (29-116)||(39186-39275)
[»] chr7 (61 HSPs)
chr7 (32-227)||(33655153-33655349)
chr7 (58-226)||(41497003-41497172)
chr7 (22-216)||(1051556-1051749)
chr7 (27-226)||(13770994-13771192)
chr7 (37-226)||(34235053-34235239)
chr7 (25-227)||(40196577-40196769)
chr7 (29-230)||(47390855-47391058)
chr7 (31-226)||(24970211-24970407)
chr7 (67-230)||(43230275-43230437)
chr7 (27-161)||(39855976-39856111)
chr7 (25-200)||(37417705-37417871)
chr7 (29-202)||(34228388-34228563)
chr7 (29-230)||(25887192-25887395)
chr7 (100-227)||(4833576-4833703)
chr7 (67-225)||(17852910-17853067)
chr7 (109-215)||(22163167-22163272)
chr7 (109-215)||(22221875-22221980)
chr7 (30-171)||(31571569-31571713)
chr7 (70-227)||(42306376-42306529)
chr7 (135-226)||(18231693-18231784)
chr7 (37-181)||(41008190-41008334)
chr7 (114-226)||(10315719-10315831)
chr7 (93-228)||(45940700-45940835)
chr7 (25-150)||(37925837-37925963)
chr7 (31-230)||(40572277-40572475)
chr7 (32-176)||(26365770-26365916)
chr7 (119-227)||(13425165-13425273)
chr7 (26-166)||(33519045-33519186)
chr7 (27-115)||(4833529-4833618)
chr7 (29-161)||(36267664-36267797)
chr7 (25-96)||(18231762-18231834)
chr7 (29-100)||(40196532-40196604)
chr7 (29-116)||(41496957-41497045)
chr7 (29-100)||(48881558-48881630)
chr7 (69-124)||(23029482-23029537)
chr7 (29-99)||(36267553-36267624)
chr7 (32-146)||(18795721-18795835)
chr7 (27-96)||(30592251-30592321)
chr7 (41-147)||(48151996-48152099)
chr7 (32-116)||(42306486-42306571)
chr7 (29-100)||(13770948-13771020)
chr7 (29-96)||(33519224-33519292)
chr7 (26-100)||(28074100-28074175)
chr7 (112-166)||(18063667-18063721)
chr7 (112-225)||(23116306-23116420)
chr7 (37-94)||(40282205-40282263)
chr7 (31-116)||(45940658-45940744)
chr7 (27-100)||(47391028-47391102)
chr7 (67-124)||(10315652-10315709)
chr7 (32-81)||(31364237-31364285)
chr7 (114-230)||(32872823-32872939)
chr7 (68-116)||(33655148-33655196)
chr7 (31-150)||(37620776-37620896)
chr7 (27-101)||(48015378-48015453)
chr7 (120-190)||(20393693-20393763)
chr7 (39-100)||(35422136-35422198)
chr7 (27-99)||(4835477-4835550)
chr7 (126-167)||(18127347-18127388)
chr7 (21-97)||(25887368-25887444)
chr7 (167-220)||(31553234-31553287)
chr7 (27-64)||(48881758-48881795)
[»] chr4 (65 HSPs)
chr4 (26-227)||(31348366-31348568)
chr4 (29-230)||(45741890-45742092)
chr4 (27-227)||(54935065-54935268)
chr4 (27-221)||(54320433-54320627)
chr4 (37-221)||(27735753-27735938)
chr4 (27-181)||(1968450-1968605)
chr4 (29-202)||(26166937-26167111)
chr4 (32-227)||(46007744-46007942)
chr4 (45-223)||(49735517-49735695)
chr4 (29-215)||(47433766-47433953)
chr4 (27-171)||(37711136-37711286)
chr4 (30-226)||(36151577-36151773)
chr4 (27-216)||(5730886-5731077)
chr4 (27-221)||(29798286-29798478)
chr4 (38-215)||(16400809-16400987)
chr4 (29-201)||(45132573-45132739)
chr4 (42-215)||(6891373-6891547)
chr4 (26-230)||(17938149-17938355)
chr4 (80-181)||(35248738-35248839)
chr4 (45-227)||(24565391-24565572)
chr4 (74-230)||(28332850-28333006)
chr4 (74-230)||(44784038-44784193)
chr4 (26-169)||(56135746-56135890)
chr4 (31-221)||(2247854-2248043)
chr4 (80-227)||(41174397-41174544)
chr4 (84-174)||(2917061-2917151)
chr4 (37-227)||(34110806-34111003)
chr4 (26-100)||(49735465-49735540)
chr4 (29-161)||(22920981-22921115)
chr4 (29-161)||(22970684-22970818)
chr4 (27-151)||(21695010-21695134)
chr4 (29-100)||(54935241-54935313)
chr4 (26-100)||(54576324-54576399)
chr4 (29-150)||(22186719-22186841)
chr4 (29-161)||(17182596-17182729)
chr4 (29-100)||(37711295-37711367)
chr4 (25-116)||(45742046-45742138)
chr4 (29-100)||(54320606-54320678)
chr4 (31-151)||(47846176-47846298)
chr4 (37-220)||(55510177-55510361)
chr4 (37-105)||(6938289-6938358)
chr4 (56-116)||(31348348-31348409)
chr4 (45-100)||(21694906-21694962)
chr4 (85-149)||(34995108-34995172)
chr4 (31-100)||(27735917-27735987)
chr4 (27-100)||(41174517-41174591)
chr4 (27-99)||(6938420-6938493)
chr4 (27-166)||(7977602-7977743)
chr4 (36-100)||(17938114-17938179)
chr4 (29-77)||(49735687-49735736)
chr4 (29-100)||(5730830-5730902)
chr4 (29-100)||(37761636-37761708)
chr4 (66-166)||(43961448-43961548)
chr4 (27-83)||(53260716-53260771)
chr4 (27-101)||(11089687-11089755)
chr4 (37-83)||(35565566-35565613)
chr4 (26-99)||(24565343-24565417)
chr4 (84-122)||(36277781-36277819)
chr4 (26-150)||(51329793-51329917)
chr4 (75-167)||(23813148-23813240)
chr4 (27-150)||(29993893-29994017)
chr4 (37-100)||(35248858-35248922)
chr4 (27-150)||(37761463-37761586)
chr4 (58-97)||(44784166-44784206)
chr4 (31-166)||(55080581-55080717)
[»] chr8 (61 HSPs)
chr8 (27-227)||(1026894-1027094)
chr8 (29-227)||(31543117-31543316)
chr8 (29-216)||(7503010-7503198)
chr8 (37-226)||(1281151-1281341)
chr8 (67-236)||(16652988-16653157)
chr8 (37-227)||(11575451-11575642)
chr8 (31-230)||(30479759-30479959)
chr8 (29-221)||(9718530-9718723)
chr8 (29-197)||(11033419-11033587)
chr8 (37-227)||(7979148-7979339)
chr8 (26-221)||(6315063-6315255)
chr8 (66-197)||(42650408-42650542)
chr8 (29-223)||(2248452-2248647)
chr8 (67-221)||(11785565-11785719)
chr8 (32-228)||(37923122-37923320)
chr8 (29-203)||(40990251-40990427)
chr8 (27-227)||(29358385-29358587)
chr8 (64-202)||(37032415-37032553)
chr8 (31-215)||(28083744-28083929)
chr8 (69-202)||(41103576-41103709)
chr8 (46-216)||(31738440-31738611)
chr8 (37-188)||(33922533-33922680)
chr8 (29-227)||(4247563-4247764)
chr8 (29-226)||(13404976-13405178)
chr8 (25-166)||(12022249-12022391)
chr8 (42-227)||(3726908-3727086)
chr8 (74-227)||(30664407-30664560)
chr8 (25-159)||(10028106-10028241)
chr8 (32-225)||(24243096-24243287)
chr8 (67-227)||(36308881-36309042)
chr8 (79-230)||(29690964-29691118)
chr8 (29-100)||(43732859-43732931)
chr8 (112-199)||(35694828-35694915)
chr8 (27-116)||(31543070-31543160)
chr8 (31-166)||(16024155-16024292)
chr8 (27-97)||(8815316-8815387)
chr8 (29-215)||(30365130-30365317)
chr8 (163-221)||(34634278-34634336)
chr8 (37-97)||(36309018-36309079)
chr8 (29-100)||(3726863-3726935)
chr8 (37-116)||(11575415-11575494)
chr8 (22-100)||(11785698-11785777)
chr8 (26-100)||(16024326-16024400)
chr8 (26-96)||(43732676-43732747)
chr8 (28-97)||(7394636-7394706)
chr8 (29-97)||(12022142-12022212)
chr8 (27-96)||(30365306-30365376)
chr8 (27-92)||(41103502-41103568)
chr8 (56-116)||(16653105-16653166)
chr8 (29-100)||(8815141-8815213)
chr8 (56-166)||(30581916-30582030)
chr8 (29-100)||(31738595-31738667)
chr8 (37-220)||(34196316-34196501)
chr8 (110-150)||(34633819-34633859)
chr8 (75-151)||(38198170-38198245)
chr8 (165-227)||(10028259-10028322)
chr8 (91-166)||(27487053-27487128)
chr8 (109-151)||(1227886-1227928)
chr8 (27-100)||(34634315-34634389)
chr8 (29-69)||(8671998-8672038)
chr8 (32-151)||(20472813-20472933)
[»] chr2 (63 HSPs)
chr2 (24-227)||(15224739-15224943)
chr2 (29-227)||(39732774-39732972)
chr2 (29-230)||(36347583-36347785)
chr2 (67-223)||(23748134-23748290)
chr2 (32-226)||(36566896-36567093)
chr2 (27-227)||(19566865-19567062)
chr2 (31-230)||(36046246-36046443)
chr2 (37-227)||(8426924-8427107)
chr2 (85-227)||(16565832-16565976)
chr2 (26-211)||(12541767-12541949)
chr2 (127-229)||(42316807-42316909)
chr2 (67-215)||(39821708-39821856)
chr2 (20-221)||(9426976-9427179)
chr2 (37-225)||(31795816-31796000)
chr2 (29-151)||(35736175-35736298)
chr2 (23-161)||(41778767-41778906)
chr2 (29-227)||(40022363-40022572)
chr2 (73-201)||(28262514-28262642)
chr2 (31-181)||(2241413-2241563)
chr2 (126-230)||(34209562-34209666)
chr2 (79-219)||(37739946-37740085)
chr2 (113-202)||(17379897-17379986)
chr2 (37-215)||(9631566-9631747)
chr2 (31-151)||(41841684-41841805)
chr2 (79-227)||(7681299-7681443)
chr2 (38-161)||(886927-887049)
chr2 (26-193)||(32503153-32503324)
chr2 (27-150)||(2381109-2381233)
chr2 (27-166)||(31061357-31061497)
chr2 (75-134)||(9591973-9592032)
chr2 (27-100)||(9631732-9631806)
chr2 (112-202)||(12751899-12751989)
chr2 (27-100)||(23748267-23748341)
chr2 (65-180)||(29525823-29525940)
chr2 (16-161)||(45257294-45257440)
chr2 (19-151)||(3094474-3094607)
chr2 (66-215)||(39354231-39354380)
chr2 (29-100)||(22356176-22356248)
chr2 (25-100)||(35736359-35736435)
chr2 (29-160)||(42296415-42296547)
chr2 (74-177)||(6721717-6721820)
chr2 (31-116)||(8426881-8426967)
chr2 (27-100)||(17380013-17380087)
chr2 (143-228)||(27926668-27926753)
chr2 (26-122)||(31795766-31795863)
chr2 (27-150)||(34187573-34187697)
chr2 (22-69)||(17379839-17379886)
chr2 (29-99)||(45257480-45257551)
chr2 (173-223)||(1583222-1583272)
chr2 (33-161)||(33265611-33265739)
chr2 (38-122)||(40022523-40022608)
chr2 (30-100)||(36046205-36046276)
chr2 (113-167)||(18811413-18811467)
chr2 (27-116)||(36347539-36347629)
chr2 (67-116)||(1583233-1583282)
chr2 (67-116)||(15224733-15224782)
chr2 (85-150)||(22356022-22356087)
chr2 (37-89)||(31061543-31061596)
chr2 (48-99)||(887283-887335)
chr2 (27-99)||(7681417-7681488)
chr2 (31-150)||(16713494-16713614)
chr2 (37-96)||(31928225-31928285)
chr2 (67-115)||(39732768-39732816)
[»] chr6 (55 HSPs)
chr6 (32-225)||(4097559-4097754)
chr6 (29-230)||(33235951-33236152)
chr6 (32-227)||(21606889-21607085)
chr6 (32-235)||(19278071-19278278)
chr6 (40-223)||(31849121-31849305)
chr6 (32-202)||(30487375-30487546)
chr6 (67-227)||(1300658-1300819)
chr6 (30-226)||(9719077-9719273)
chr6 (27-226)||(1390317-1390517)
chr6 (88-230)||(5585343-5585486)
chr6 (25-201)||(14515469-14515644)
chr6 (27-227)||(10818227-10818415)
chr6 (27-226)||(16738042-16738241)
chr6 (90-230)||(34176397-34176537)
chr6 (32-226)||(2892650-2892844)
chr6 (29-227)||(9721183-9721381)
chr6 (86-204)||(13583777-13583895)
chr6 (32-226)||(33041473-33041660)
chr6 (31-150)||(2893632-2893752)
chr6 (135-227)||(2900017-2900109)
chr6 (29-144)||(12811108-12811224)
chr6 (68-235)||(2892880-2893050)
chr6 (85-216)||(10348854-10348986)
chr6 (85-226)||(1395692-1395834)
chr6 (30-125)||(10818364-10818459)
chr6 (69-143)||(6034201-6034275)
chr6 (27-100)||(9721136-9721210)
chr6 (97-183)||(25741476-25741562)
chr6 (32-176)||(30850008-30850153)
chr6 (27-100)||(9719029-9719103)
chr6 (27-107)||(1300785-1300866)
chr6 (27-151)||(23090993-23091118)
chr6 (48-192)||(29490475-29490621)
chr6 (27-95)||(30487304-30487373)
chr6 (29-160)||(15353364-15353495)
chr6 (25-160)||(14548718-14548850)
chr6 (29-151)||(15323225-15323348)
chr6 (126-197)||(665915-665987)
chr6 (25-100)||(4097231-4097307)
chr6 (29-122)||(9298636-9298735)
chr6 (37-96)||(19278042-19278102)
chr6 (37-99)||(23091131-23091195)
chr6 (59-151)||(26318336-26318428)
chr6 (29-95)||(14515648-14515715)
chr6 (120-167)||(32926737-32926784)
chr6 (26-100)||(33236122-33236197)
chr6 (27-69)||(9051736-9051778)
chr6 (98-183)||(25747403-25747489)
chr6 (27-95)||(665839-665907)
chr6 (41-82)||(14548629-14548670)
chr6 (47-151)||(16509299-16509403)
chr6 (24-99)||(9051529-9051605)
chr6 (168-227)||(9298625-9298685)
chr6 (185-221)||(12811034-12811070)
chr6 (67-99)||(21606883-21606915)
[»] scaffold0262 (2 HSPs)
scaffold0262 (67-227)||(16341-16501)
scaffold0262 (26-95)||(16293-16363)
[»] scaffold0096 (1 HSPs)
scaffold0096 (29-225)||(6584-6780)
[»] scaffold0026 (2 HSPs)
scaffold0026 (32-227)||(1175-1371)
scaffold0026 (27-161)||(1508-1644)
[»] scaffold0171 (1 HSPs)
scaffold0171 (73-236)||(15995-16158)
[»] scaffold0294 (1 HSPs)
scaffold0294 (85-224)||(15320-15458)
[»] scaffold0341 (1 HSPs)
scaffold0341 (68-227)||(18811-18968)
[»] scaffold0240 (1 HSPs)
scaffold0240 (25-96)||(17716-17786)
[»] scaffold0198 (2 HSPs)
scaffold0198 (32-116)||(3150-3235)
scaffold0198 (185-230)||(3189-3234)
[»] scaffold0007 (1 HSPs)
scaffold0007 (37-100)||(242388-242452)
[»] scaffold0012 (1 HSPs)
scaffold0012 (37-100)||(184779-184843)
[»] scaffold0119 (1 HSPs)
scaffold0119 (21-151)||(37375-37506)


Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 26414865 - 26415095
Alignment:
Q  1 cttatattgagagacaaaataaaatctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  26414865 cttatattgagagacaaaataaaatctaagggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacgga 26414964  T
Q  100 ctatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26414965 ctatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcatgttaatatgttaactttttataaaacatttcatagt 26415064  T
Q  200 gtctgcaatttaaaaataaaaagtaaactct 230  Q
    ||||| || |||||||| |||||||||||||    
T  26415065 gtctgtaacttaaaaatgaaaagtaaactct 26415095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 26 - 225
Target Start/End: Original strand, 13634708 - 13634908
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  13634708 ctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaata 13634807  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagta 224  Q
     |||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||  | ||||||||||| |||||||    
T  13634808 aattatgtgtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagta 13634907  T
Q  225 a 225  Q
    |    
T  13634908 a 13634908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 36392395 - 36392195
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    |||||| || |||||||||||||||||| |||||||| ||| || | |||||  |||||||||||||||||||||||||| | || |||| ||||||||     
T  36392395 taagggcgtgtttggattgagggtttaggaggggaagagagcggtgtgtttatatttcgtttttaaattacggactatataatatatttt-ctaaaatag 36392297  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  36392296 attaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaa 36392197  T
Q  226 ac 227  Q
    ||    
T  36392196 ac 36392195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 7544133 - 7544329
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||||||| |||||||||||||||||| | |||||||||||| |||| | | ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  7544133 ctaagggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaata 7544232  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
     || ||||||||||||||||||||||| | ||||||  |||||||||| |||||||||| |||||||||||||||||| | ||||||||||| ||||    
T  7544233 aatcaagtgtgattgaagtattatatgattgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 7544329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 226
Target Start/End: Complemental strand, 28279725 - 28279522
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgttttt-ctaaaa 122  Q
    ||||||||||| ||||||||||| || || |||||||||||||| ||||||||||||||| ||||||||||| ||| ||||| |||||||||| ||||||    
T  28279725 tctaagggtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaa 28279626  T
Q  123 tatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaag 222  Q
    || | |||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||||||||| ||||   ||||||||||| |||||    
T  28279625 taaactaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaag 28279526  T
Q  223 taaa 226  Q
    ||||    
T  28279525 taaa 28279522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 216
Target Start/End: Original strand, 16938479 - 16938667
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||||||  ||||| ||||||| ||||||||||||| |||||||| ||||||||| ||    
T  16938479 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataaat 16938578  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    |||||||||||||| ||||||||| || |||||| |||||| ||||||||| |||| |||||||||||||||||| | |||||||||||    
T  16938579 taagtgtgattgaaatattatatgatcatttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaat 16938667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 230
Target Start/End: Complemental strand, 4373810 - 4373608
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| | |||||   || ||||| |||||||||| ||||||||||||||||||||| ||| ||||||  |||||| ||    
T  4373810 agggtgtgtttggattgagggtttaggaagggaaaatagtggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaataaat 4373711  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||||||||| ||||||||| || |||||| ||||||||||||||||||| | |||| |||||| |||||| | ||||||||||| ||||||||||    
T  4373710 taagtgtgattgaaatattatatgatcatttatcatgttaatatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagtaaac 4373611  T
Q  228 tct 230  Q
    |||    
T  4373610 tct 4373608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 37606940 - 37607093
Alignment:
Q  73 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatg 172  Q
    ||||||||||||||||||||||| ||||||||| | |||||||| ||||||| ||||  |||||||||||||||||||| ||||||||| ||||||||||    
T  37606940 gtttacttttcgtttttaaattaaggactatataa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatg 37607038  T
Q  173 ttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  37607039 ttaactttttataaaacatttcatagtatctgtattttaaaaatgaaaagtaaac 37607093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 67 - 216
Target Start/End: Original strand, 9856919 - 9857068
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||| ||||| ||||| ||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||||||  ||||    
T  9856919 gggagagtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgatcgtttattatgtt 9857018  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    ||||||||||||||||| |||||||||||||||||| | || ||||||||    
T  9857019 aatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaat 9857068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 37779150 - 37779302
Alignment:
Q  73 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatg 172  Q
    ||||||||||||||||||||||| |||||||   | |||||||| ||||||| ||||  |||||||||||||||||||| ||||||||| ||||||||||    
T  37779150 gtttacttttcgtttttaaattaaggactatt--aaatgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatg 37779247  T
Q  173 ttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  37779248 ttaactttttataaaacatttcatagtatctgtagtttaaaaatgaaaagtaaac 37779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 2550588 - 2550397
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||  | |||||||||| ||||||||||||| |||| |||| |||||    
T  2550588 tttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacgtgtg 2550489  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaact-ttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||||||||||| | ||||||| || || ||| |||| | ||| | ||||||| |||||||||||| ||||||||||| ||||||||||    
T  2550488 attgaagtattatatgattgtttatcatg-tattattttaattgtttaaaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaaac 2550397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 27 - 221
Target Start/End: Complemental strand, 20147116 - 20146917
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata-- 124  Q
    ||||||||| |||||||||||||||||| ||||||||||    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||      
T  20147116 taagggtgtgtttggattgagggtttaggaggggaaggg----agggtttacttttcatttttaaattacggattatat-acatgtttttctaaaataaa 20147022  T
Q  125 --------tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
             |||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||| | | |||||||||||    
T  20147021 ttaagtgtaattaagtgtgattgaaatattatatgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaat 20146922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 37551453 - 37551604
Alignment:
Q  73 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatg 172  Q
    ||||||||||||||||||||||| ||||||||| | | ||||||  |||||| |||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  37551453 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37551551  T
Q  173 ttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||||||||  |||||||| | ||||||||| ||||||||||    
T  37551552 ttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaac 37551604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 37654283 - 37654434
Alignment:
Q  73 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatg 172  Q
    ||||||||||||||||||||||| ||||||||| | | ||||||  |||||| |||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  37654283 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37654381  T
Q  173 ttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||||||||  |||||||| | ||||||||| ||||||||||    
T  37654382 ttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaac 37654434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 236
Target Start/End: Original strand, 36363040 - 36363240
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    |||||||||||||||||||||||||| |||||| || ||||| ||||| | |||||| |||| ||||||| |||||||||||||||||| || ||||||     
T  36363040 tttggattgagggtttagaaggggaatggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaagtgtc 36363139  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactctgtcct 235  Q
    |||||||| ||||||  | ||||||| || ||||||||||||||| || || |||||| ||||| || | ||||||||||| |||||| |||||| ||||    
T  36363140 attgaagttttatatcattgtttatcatgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcct 36363239  T
Q  236 c 236  Q
    |    
T  36363240 c 36363240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 74 - 199
Target Start/End: Complemental strand, 10072845 - 10072720
Alignment:
Q  74 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgt 173  Q
    |||||||||| |||||||||||| |||  ||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  10072845 tttacttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 10072746  T
Q  174 taactttttataaaacatttcatagt 199  Q
    |||||||||| |||| ||||||||||    
T  10072745 taactttttaaaaaatatttcatagt 10072720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 9798826 - 9798654
Alignment:
Q  59 ggaagggagggaggg-tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtt 157  Q
    |||||||||||| || |||||||||| |||| ||||||| || ||||| |||||||||||| ||||| ||||| |||||||||||||||||||| |||||    
T  9798826 ggaagggagggaaggatttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaattgtgattgaagtattatatgatcgtt 9798727  T
Q  158 tatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    | || |||||| || || |||||||| |||||||||| |||| || | ||||||||||| |||||||||||||    
T  9798726 tttcatgttaaaatattgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaagtaaactct 9798654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 227
Target Start/End: Original strand, 10476024 - 10476227
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaa-ttacggactatatg-acatgtttttctaaaat 123  Q
    ||||||||| |||| ||||||||||||| ||||||||||| | ||||||||||||||| |||||||| |||| || |||||  |||||||||||||||||    
T  10476024 taagggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaat 10476123  T
Q  124 atattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    | |||||||||||||||||||||||||  ||||||||| | ||||||||||   |||||   ||| |||||||||||   | ||||||||||| | ||||    
T  10476124 aaattaagtgtgattgaagtattatataatcgtttatcatcttaatatgtttttttttttataaatatttcatagtggtcgtaatttaaaaattataagt 10476223  T
Q  224 aaac 227  Q
    ||||    
T  10476224 aaac 10476227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 107 - 226
Target Start/End: Complemental strand, 17024389 - 17024270
Alignment:
Q  107 acatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgca 206  Q
    |||||||||||||||||| |||||||  ||||||||||||||||| |||||| || |||||||||| |||||||||| | ||||||||||| ||||||||    
T  17024389 acatgtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcataatgtctgca 17024290  T
Q  207 atttaaaaataaaaagtaaa 226  Q
    |||||||||| |||||||||    
T  17024289 atttaaaaatgaaaagtaaa 17024270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 226
Target Start/End: Complemental strand, 16502034 - 16501836
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagggagggt--ttacttttcgtttttaaattacggactatatgacatgttttt-ctaaaatatat 127  Q
    ||||| |||||||||||||||||| |||| ||| ||||| | |   ||||||||  |||||||||||||||||||||  ||| ||||| |||||||| ||    
T  16502034 ggtgtgtttggattgagggtttaggagggaaagagagggggagaaattacttttattttttaaattacggactatatatcatattttttctaaaataaat 16501935  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
     |||||||||| |||| ||||||| || |||||  ||||||||||||||||||| | ||||||||||||| |||| | ||||||||||| |||| ||||    
T  16501934 caagtgtgattaaagttttatatgatcatttattatgttaatatgttaacttttaaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaa 16501836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 226
Target Start/End: Complemental strand, 20513682 - 20513491
Alignment:
Q  28 aagggtgtatttggattgagggtttag-aaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 126  Q
    |||||||| |||||||||||||||||| ||| | || | ||| ||| |||||||||| |||||||||||||            ||||||| ||||||| |    
T  20513682 aagggtgtgtttggattgagggtttaggaagcgaaaagaaggaaggatttacttttcttttttaaattacg------------tgtttttataaaataaa 20513595  T
Q  127 ttaagtgtgattgaagtattatat----ggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaag 222  Q
    ||||||||||||||||||||||||    | ||||||||| || |||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||    
T  20513594 ttaagtgtgattgaagtattatatatatgatcgtttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgtagtttaaaaatgaaaag 20513495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 14681468 - 14681661
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 126  Q
    |||| |||| |||||||||||||||||| ||||||||| || || |||| | ||||| |||||||||||| || ||||| |||||||||| ||||||| |    
T  14681468 taagtgtgtgtttggattgagggtttaggaggggaaggaagtgatggttaaattttcttttttaaattacagattatataacatgtttttttaaaataaa 14681567  T
Q  127 ttaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaag 222  Q
    |||| ||||||||||| | ||||||   ||||||| |||||||||  |||||||||| |||| |||| | || || || |||||||||||||||||    
T  14681568 ttaaatgtgattgaaggaatatatgactgtttatcatgttaatat-ataacttttta-aaaatattttacagggtttgtaatttaaaaataaaaag 14681661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 11756886 - 11757024
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 136  Q
    |||||||||||||||||| |||||| ||  ||||| ||||  ||||  ||||||||||||| ||||||| |||||||| ||||||||| |||||||||||    
T  11756886 tttggattgagggtttaggaggggagggatgggagagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaattaagtgtga 11756985  T
Q  137 ttgaagtattatatggtcgtttatcttgttaatatgtta 175  Q
    || |||||||||||| || |||||  |||||||||||||    
T  11756986 ttaaagtattatatgatcatttatgatgttaatatgtta 11757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 8503017 - 8502884
Alignment:
Q  90 aaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaac 189  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| |  | || |||| | ||||| ||||||||||||| ||||     
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaat 8502918  T
Q  190 atttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    |||||||| |||| | ||||||||||| ||||||    
T  8502917 atttcataatgtccgtaatttaaaaatgaaaagt 8502884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 228
Target Start/End: Original strand, 10650435 - 10650614
Alignment:
Q  37 tttggattgagggtttagaaggggaa--gggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtg 133  Q
    ||||||| |||| ||||| |||||||  ||||||| ||| |||||||||  ||||||||||||||||  ||||| |||||||||||||||| ||||||||    
T  10650435 tttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagtg 10650534  T
Q  134 tgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaact 228  Q
    |||||||||               |||| || |||||||||||||||||||||||||||||||||| || | |||||||||| ||||||||||||    
T  10650535 tgattgaag---------------tatcatggtaatatgttaactttttataaaacatttcatagtatccgtaatttaaaaacaaaaagtaaact 10650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 40815291 - 40815418
Alignment:
Q  23 aatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 121  Q
    ||||||||||||| |||||||||| | ||||| ||||||||||| | |||| |||||||||| |||||||||||| |||||||| |||||||||| ||||    
T  40815291 aatctaagggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattacagactatataacatgtttttataaa 40815390  T
Q  122 atatattaagtgtgattgaagtattatat 150  Q
    ||| |  ||||||||||||| ||||||||    
T  40815391 ata-aaaaagtgtgattgaaatattatat 40815418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 42681450 - 42681618
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgttttta-----aattacggactatatgacatgtttttctaaaata 124  Q
    ||||| |||||||||||||||||  ||||||| |||||| ||| |||||||||  |||||      ||||||||||||||| ||||||||||||||||||    
T  42681450 ggtgtgtttggattgagggtttaagaggggaaaggaggggaggatttactttttttttttttttttaattacggactatataacatgtttttctaaaata 42681549  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacattt 193  Q
      || ||||||||| |||||||||||| || |||||| ||||| ||| |||| |||||| |||| ||||    
T  42681550 attttagtgtgattaaagtattatatgatcatttatcatgttattattttaattttttaaaaaatattt 42681618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 1658065 - 1657985
Alignment:
Q  21 aaaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| ||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1658065 aaaatctaaaggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggac 1657985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 14245084 - 14245160
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||    
T  14245084 tctaagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggac 14245160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 22022849 - 22022963
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagg-gagggttta---cttttcgtttttaaattacggactatatgacatgtttttctaaaatata 126  Q
    ||||| |||||||||||||||||| ||||||| ||||| |||| ||||    ||||  ||||||||||||||||||||| |||| ||||||||||||| |    
T  22022849 ggtgtgtttggattgagggtttaggaggggaatggaggagaggatttagttttttttttttttaaattacggactatataacatatttttctaaaataaa 22022948  T
Q  127 ttaagtgtgattgaa 141  Q
    |||||||||||||||    
T  22022949 ttaagtgtgattgaa 22022963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 10204573 - 10204708
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||||||| ||||||| |||||||||| ||||||||||||| ||||| | ||||||  ||||||||||||  || || | | |||| ||| |||||||    
T  10204573 ctaagggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaata 10204672  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttat 160  Q
     |||||||||  ||||||||||||||| || |||||    
T  10204673 aattaagtgtttttgaagtattatatgatcatttat 10204708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 13634954 - 13634867
Alignment:
Q  30 gggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||| ||  ||||| ||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttt 13634867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 15986871 - 15986745
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||||||| |||||||||||||||||| ||||||||| || |||||| | ||||||  ||||||||||||| || || | | |||| ||| |||||||    
T  15986871 ctaagggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaata 15986772  T
Q  125 tattaagtgtgattgaagtattatatg 151  Q
     |||||||||  || ||||||||||||    
T  15986771 aattaagtgtttttaaagtattatatg 15986745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 14245290 - 14245218
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||  ||||| ||||||||||||||||    
T  14245290 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggac 14245218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 34980812 - 34980932
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| |||||||||| ||||||| |||||||||||||| |||||| ||||||  ||||||||||||| || |  | | || ||||| ||||||| ||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaatta 34980911  T
Q  130 agtgtgattgaagtattatat 150  Q
    |||||  ||||||||||||||    
T  34980912 agtgtttttgaagtattatat 34980932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 11436937 - 11437016
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatat 105  Q
    |||||| || |||||||||||||||||| |||||||||||| |||||| ||||||| | |||||||||||||||| ||||    
T  11436937 taagggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatat 11437016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 14684728 - 14684604
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttcta--aaatat 125  Q
    ||||||| |||||||| ||||||||| ||||| || ||| |||||| ||||||||| ||||| |||||||| | |||| | |||||||| |   |||||     
T  14684728 agggtgtgtttggatttagggtttaggaggggcagagagaggagggcttacttttctttttttaattacgggcaatataaaatgttttttttttaaataa 14684629  T
Q  126 attaagtgtgattgaagtattatat 150  Q
    |||||||||||||||| ||||||||    
T  14684628 attaagtgtgattgaaatattatat 14684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 33744440 - 33744299
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    ||||||||||||||||||||||||||||| ||  ||||||| ||||||| | ||||||   |||||||||||| || ||   | |||||||| |||||||    
T  33744440 ctaagggtgtatttggattgagggtttaggagatgaagggaggggagggctcacttttatattttaaattacgaacaattcaaaatgtttttttaaaata 33744341  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
     |||||||||  |||||| | |||||| || |||||| ||||    
T  33744340 aattaagtgtttttgaagaaatatatgatcatttatcatgtt 33744299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 7544378 - 7544292
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||| ||||||| |||||||||| ||||||||| |||| |||||||  ||||| ||||||||||||||||  ||||| ||||||||    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttt 7544292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 14245204 - 14245134
Alignment:
Q  156 tttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    |||||| |||||||||||||||||| || ||||||||||| |||||| | ||||||||||  |||||||||    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaa 14245134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 1657955 - 1658012
Alignment:
Q  170 atgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||||||||| ||||||||| |||||||| | ||||||||||| ||||||||||    
T  1657955 atgttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaac 1658012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 11419360 - 11419303
Alignment:
Q  73 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    ||||||||||| ||||||||||||||  ||||| |||||||||||||||||| |||||    
T  11419360 gtttacttttcttttttaaattacgggttatataacatgtttttctaaaataaattaa 11419303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 29002359 - 29002251
Alignment:
Q  119 aaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataa 218  Q
    |||||| ||||| | |||||| ||||||||||| ||||||||| ||||||||||||   |||  | ||||||||| |||||||    ||||||||||| |    
T  29002359 aaaataaattaaatatgattgtagtattatatgatcgtttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatga 29002260  T
Q  219 aaagtaaac 227  Q
    |||||||||    
T  29002259 aaagtaaac 29002251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 43504 - 43615
Alignment:
Q  126 attaagtgtgattgaagtattatatgg-tcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaa-tttaaaaataaaaagt 223  Q
    ||||||| ||| |||||||||| |||  || |||||  ||||||||||||||||||| | |||| ||||||||||||  | || ||||||||| ||||||    
T  43504 attaagtatgactgaagtattacatgtatcttttattatgttaatatgttaacttttcaaaaaatatttcatagtgttcgtaattttaaaaatgaaaagt 43603  T
Q  224 aaactctgtcct 235  Q
    ||||||| ||||    
T  43604 aaactctctcct 43615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 5688452 - 5688535
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatat 150  Q
    ||||||||| ||||||  ||||||||||||| || || | | |||||||| ||||||| |||||||||  ||||||||||||||    
T  5688452 gggagggttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatat 5688535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 32727918 - 32727819
Alignment:
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    ||||| ||||| ||||| ||| ||||||||| ||||||||||||   |||||| |||| |||||||| |  | | ||||||||||||||| |||||||||    
T  32727918 gtgtggttgaattattacatgatcgtttatcatgttaatatgttcgttttttaaaaaatatttcataatacccgtaatttaaaaataaaatgtaaactct 32727819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 36363268 - 36363205
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 99  Q
    ||||||| |||||||||| ||||||||||||| ||| ||| ||||||| |||||||||||||||    
T  36363268 tttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacgga 36363205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 16938725 - 16938635
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||||| ||||||| |||||||||| || |||| |||||| ||||||||  |||| |||||||||||| |||  ||||| ||||||||    
T  16938725 taagggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttt 16938635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 22023483 - 22023537
Alignment:
Q  144 attatatggtcgtttatcttgttaatatgttaac-tttttataaaacatttcata 197  Q
    |||||||| ||||||||| ||||||||||||||| |||||| |||||||||||||    
T  22023483 attatatgatcgtttatcatgttaatatgttaacttttttaaaaaacatttcata 22023537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 10476272 - 10476203
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 97  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||| |||||||| |  |||||||||||||    
T  10476272 agggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacg 10476203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 10650516 - 10650475
Alignment:
Q  185 aaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  10650516 aaaacatttcatagtgtccgtaatttaaaaataaaaagtaaa 10650475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 11437186 - 11437149
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga 66  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  11437186 agggtgtttttggattgagggtttagaaggggaaggga 11437149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 11757144 - 11757075
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    |||| ||||||| |||||||||  |||||||||||||| ||||||||  |||| ||||||||||||||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggac 11757075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 33744193 - 33744265
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| ||||||| ||  || |||||||||| |||||||||||||| ||||||||||| ||||    
T  33744193 agggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaattatggac 33744265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 10650658 - 10650587
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 99  Q
    ||||||| ||||||||||  |||| | ||||||||||||| ||  |||||||||| ||||||||||||||||    
T  10650658 agggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacgga 10650587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 21580947 - 21581070
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||||||||||||| |||||| | || | |||||| ||||||| | ||||||  ||| ||||||||| || || | | || ||||| ||||||| ||    
T  21580947 agggtgtatttggattgggggttttggagagaaagggaggggaggggtcacttttattttctaaattacgaacaatgtaaaatatttttttaaaataaat 21581046  T
Q  128 taagtgtgattgaagtattatatg 151  Q
    |||||||  ||||||||| |||||    
T  21581047 taagtgtttttgaagtatcatatg 21581070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 40305912 - 40305869
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg 69  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||    
T  40305912 ctaagggtgtgtttggattgagggtttaggaggagaagggaggg 40305869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 2550391 - 2550445
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 121  Q
    ||||||||||||||||| |||||||||||| |||  ||||| |||||||| ||||    
T  2550391 gggagggtttacttttcatttttaaattacagacactatgatatgtttttttaaa 2550445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 8502833 - 8502907
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| ||||||| || ||||||  | ||||| ||| ||||||||| ||||||| ||||||||||||||||    
T  8502833 taagggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggac 8502907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 8551660 - 8551530
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagggagggttt-acttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| |||||||||| ||||||| |||||||| ||||| |||| | ||||||  |||||||||||||  | || | | |||| |||  |||||| ||||    
T  8551660 ggtgtgtttggattgaaggtttaggaggggaagagagggggggtctcacttttattttttaaattacgagcaatgtaaaatgtgttttaaaaataaatta 8551561  T
Q  130 agtgtgattgaagtattatatggtcgtttat 160  Q
    |||||  || |||||||||||| || |||||    
T  8551560 agtgtttttaaagtattatatgatcatttat 8551530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 39966139 - 39966073
Alignment:
Q  85 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatg 151  Q
    ||||||||||||||| ||||| |||| ||||| | ||||| |||||  ||||||||| |||||||||    
T  39966139 tttttaaattacggattatataacatattttttttaaataaattaaacgtgattgaattattatatg 39966073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 5688634 - 5688597
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga 66  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  5688634 agggtgtgtttggattgagggtttaggaggggaaggga 5688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 10043250 - 10043375
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||||||| |||||| ||||||  |||||||||||||| | |  | ||||||  ||||||||||||| || || | | || || || ||||| |     
T  10043250 taagggtgtatttagattgatggtttatgaggggaagggaggggatgactcacttttattttttaaattacgaacaatgtaaaatattgttttaaaagaa 10043349  T
Q  126 attaagtgtgattgaagtattatatg 151  Q
    |||||||||  |||||||||||||||    
T  10043350 attaagtgtttttgaagtattatatg 10043375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 13298313 - 13298386
Alignment:
Q  75 ttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 148  Q
    ||||||||| |||||||||| ||||| |||| | | ||||||  || ||| ||||||||||||| |||||||||    
T  13298313 ttacttttcttttttaaattgcggacaatataaaacgtttttgcaatataaattaagtgtgatttaagtattat 13298386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 35176756 - 35176789
Alignment:
Q  21 aaaatctaagggtgtatttggattgagggtttag 54  Q
    |||| |||||||||||||||||||||||||||||    
T  35176756 aaaaactaagggtgtatttggattgagggtttag 35176789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 37551649 - 37551585
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaa 92  Q
    ||||||| ||||||| |||||||||  |||| ||||||| ||| |||||||||||| ||||||||    
T  37551649 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 37654479 - 37654415
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaa 92  Q
    ||||||| ||||||| |||||||||  |||| ||||||| ||| |||||||||||| ||||||||    
T  37654479 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 40305670 - 40305710
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg 69  Q
    ||||||| ||||||| |||||||||| ||||||||||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaagggaggg 40305710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 40095182 - 40094978
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgttttt-ctaaaa 122  Q
    ||||||||||| ||||||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  40095182 tctaagggtgtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaattacagactatataacatgttttttctaaaa 40095083  T
Q  123 tatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaag 222  Q
    || |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  40095082 taaattaagtgtgattgaagtattatatgatcgtttatcatgttaatttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaag 40094983  T
Q  223 taaac 227  Q
    |||||    
T  40094982 taaac 40094978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 32951562 - 32951366
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| ||||||||||| |||||| || ||||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  32951562 agggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataaat 32951463  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagta 224  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||||| |||||||    
T  32951462 taagtgtgattgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaagta 32951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 41498402 - 41498602
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| | ||||| | ||||| |||||||  |||     
T  41498402 taagggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataa 41498501  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
     ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  41498502 gttaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaa 41498601  T
Q  226 a 226  Q
    |    
T  41498602 a 41498602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 30010332 - 30010531
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||| |||||||||| | ||||||||||||||||||| |||||||||||||||||| ||    
T  30010332 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataaat 30010431  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||| ||||||||||||||| ||||||||  |||||||||||||||| |||| |||||||||| ||||||| | ||||| ||||| ||||||||||    
T  30010432 taagtgtggttgaagtattatatgatcgtttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaaac 30010531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 35349706 - 35349509
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |     
T  35349706 agggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaataaac 35349607  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||| || |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||  |||||| | ||||||||||| ||||||||||    
T  35349606 taagggttattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttc--agtgtccgtaatttaaaaatgaaaagtaaac 35349509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 27 - 236
Target Start/End: Original strand, 10391870 - 10392081
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    |||||||| ||||||||||||| ||||| |||||||  ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||     
T  10391870 taagggtgaatttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataa 10391969  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttt-ataaaacatttcatagtgtctgcaatttaaaaataaaaagta 224  Q
    ||||| ||||||| ||||||||||||  |||||||| |||||||||||||||||||| | ||||||||| ||| ||| || ||||||||||  |||||||    
T  10391970 attaattgtgattaaagtattatatgaccgtttatcatgttaatatgttaactttttaaaaaaacatttaataatgtttgtaatttaaaaacgaaaagta 10392069  T
Q  225 aactctgtcctc 236  Q
    |||||| |||||    
T  10392070 aactctctcctc 10392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 26 - 223
Target Start/End: Complemental strand, 38510141 - 38509943
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    ||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  38510141 ctaagagtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaata 38510042  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
     || ||||||||||||||||||||||  ||||||||| |||||| ||||||| |||||| || ||||||||||||||| | ||||||||||| ||||||    
T  38510041 aatcaagtgtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagt 38509943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 2859168 - 2858977
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  2859168 tttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgtg 2859069  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||||||||||| | ||||||  ||| | ||||||||||||||| | |||||||||||| ||||| |||||| |||| ||||||||||    
T  2859068 attgaagtattatatgattgtttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaac 2858977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 8529838 - 8529999
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||||||||||||| ||||||||||||  ||||||| |||||||||| | ||||| |||||||||||||||||||||||||| ||||||| | ||||    
T  8529838 gggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattatatgatcgtttaccatgtt 8529937  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaact 228  Q
    ||||||||||||||||| |||| ||||||||||||| | ||||||||||| |||||||||||    
T  8529938 aatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaact 8529999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 27 - 227
Target Start/End: Original strand, 12234008 - 12234209
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||     
T  12234008 taagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataa 12234107  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    || |||||||||||| |||| ||||| || | |||  |||||||||| ||||||| || |||||||||| ||||||| | ||||||||||| |||| |||    
T  12234108 atcaagtgtgattgatgtataatatgatcatatattatgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaa 12234207  T
Q  226 ac 227  Q
    ||    
T  12234208 ac 12234209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 226
Target Start/End: Original strand, 51597676 - 51597866
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||| ||||||||| ||||||||||| |||||||||| ||||||| ||||||||||    
T  51597676 tttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaagtgtg 51597775  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    |||||||||||||||| | ||||||| | ||||||||||||||||||| ||| |||||||||||||    ||||||||| | |||||||||    
T  51597776 attgaagtattatatgattgtttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagtaaa 51597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 50744486 - 50744336
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  50744486 gggagggtttgtttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 50744387  T
Q  167 aatatgttaact-ttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    |||||||||||| ||| | |||||||||||||||||| | |||||||||||    
T  50744386 aatatgttaactctttaaaaaaacatttcatagtgtccgtaatttaaaaat 50744336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 216
Target Start/End: Complemental strand, 45585884 - 45585741
Alignment:
Q  73 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatg 172  Q
    ||||||||||| | || |||||||||||||||| |||||||||| ||||||| |||||||||||| |||||| |||||| ||||||||| ||||||||||    
T  45585884 gtttacttttcctcttaaaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatg 45585785  T
Q  173 ttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    ||||||||| | ||||||||| ||||| |||  |||||||||||    
T  45585784 ttaacttttaaaaaaacattttatagtatctataatttaaaaat 45585741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 216
Target Start/End: Complemental strand, 49946834 - 49946644
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||| ||| ||||||||||||| ||||  |||||||||| | ||||||||||||||| | ||||||  |  |||||||| |||||||||| |||||||     
T  49946834 taaggatgtgtttggattgagggattaggcggggaagggatgtgagggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataa 49946735  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    ||||| |||||||||||||||||||| |  |||||| ||||||||||||||||||| | |||| |||| |||||||| | |||||||||||    
T  49946734 attaaatgtgattgaagtattatatgataatttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaat 49946644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 36285739 - 36285630
Alignment:
Q  107 acatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgca 206  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||| |||| |||||||  | |    
T  36285739 acatgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcgta 36285640  T
Q  207 atttaaaaat 216  Q
    ||||||||||    
T  36285639 atttaaaaat 36285630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 26941077 - 26940892
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 128  Q
    ||||||| |||||||||||||||||| |||||||||         || | ||||| |||||||| |||||| | ||| |||||||||||||||||| ||     
T  26941077 agggtgtgtttggattgagggtttaggaggggaagg---------ttcaattttcttttttaaaatacggattctataacatgtttttctaaaataaatc 26940987  T
Q  129 aagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    |||||||||||||||||||||||   |||||   |||||||| |||||||||| |  ||| ||||||||||||||  ||||||||||||||||||    
T  26940986 aagtgtgattgaagtattatatgactgtttacgatgttaataagttaacttttaaacaaatatttcatagtgtctataatttaaaaataaaaagt 26940892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 6563618 - 6563775
Alignment:
Q  68 ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtta 167  Q
    |||||||||| ||||| ||||||||| || |||||||| |||||| ||||||||||| |||| |||| |||||| ||||||||| || |||||| |||||    
T  6563618 ggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcatgtta 6563715  T
Q  168 atatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||| ||||||| ||| |||| | |||||||||||  | |||||||||| ||||||||||    
T  6563716 atatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 6563775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 7444571 - 7444694
Alignment:
Q  104 atgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtct 203  Q
    |||||||||||||||||| || |  ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||| ||||| ||||||||     
T  7444571 atgacatgtttttctaaattaaaccaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaatcattttatagtgtcc 7444670  T
Q  204 gcaatttaaaaataaaaagtaaac 227  Q
    | ||||| ||||| |||| |||||    
T  7444671 gtaattttaaaatgaaaactaaac 7444694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 44211103 - 44210981
Alignment:
Q  74 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgt 173  Q
    ||||| |||| ||| |||||||| | |||||| || ||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||  ||| |    
T  44211103 tttacatttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattt 44211004  T
Q  174 taactttttataaaacatttcat 196  Q
    ||| |||||| | ||||||||||    
T  44211003 taattttttagagaacatttcat 44210981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 41676363 - 41676480
Alignment:
Q  112 tttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactt--tttataaaacatttcatagtgtctgcaatt 209  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||     | ||||||||| |||||||| | ||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatt 41676462  T
Q  210 taaaaataaaaagtaaac 227  Q
    ||||||| ||||||||||    
T  41676463 taaaaatgaaaagtaaac 41676480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 42230617 - 42230713
Alignment:
Q  107 acatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtct 203  Q
    ||||||||||  |||||| |||||||||||||||||||||||||| | ||||||  ||||||||| |||||||| || ||||||||| |||||||||    
T  42230617 acatgttttttaaaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattttaactttataaaaaacattttatagtgtct 42230713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 30010579 - 30010504
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  30010579 ctaagggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggac 30010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 40094933 - 40095020
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttt 115  Q
    ||||||| ||||||| |||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||  ||||| |||||||    
T  40094933 agggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgtttt 40095020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 1085734 - 1085601
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| ||||||| |||||||||| ||||||||||||| || |  | ||||||  ||||||||||||| || || | | |||||||| ||||||| ||    
T  1085734 agggtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaataaat 1085635  T
Q  128 taagtgtgattgaagtattatatggtcgtttatc 161  Q
    |||||||  ||||||||||||||| || ||||||    
T  1085634 taagtgtttttgaagtattatatgatcatttatc 1085601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 20576269 - 20576175
Alignment:
Q  134 tgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||||||||  |||||| | ||||||||||| |||  ||||||||    
T  20576269 tgattgaagtattatatgatcgtttatcatgttaatatattaactctttaaaaaacatttc--agtgtccgtaatttaaaaatgaaatctaaactct 20576175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 26324013 - 26324112
Alignment:
Q  28 aagggtgtatttggattgagggtttagaaggggaaggga------gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 121  Q
    |||||||| |||||||||||||||||| |||||||||||      ||||||||||  ||||| ||||||||||||  ||||||| |||||||||||||||    
T  26324013 aagggtgtgtttggattgagggtttaggaggggaagggaggggaggggagggtttgattttcttttttaaattaccaactatataacatgtttttctaaa 26324112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 38509894 - 38509966
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| |||||||||||| |||||||| ||||||| ||||||||||||||||    
T  38509894 agggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggac 38509966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 12234252 - 12234182
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggac 12234182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 49832547 - 49832669
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    |||||| ||||||||| | ||||||| |||||||| ||| |||| | ||||||||| |||||||||||| ||  |||| |  |||||||  |||||| |     
T  49832547 agggtgcatttggattcaaggtttaggaggggaagtgagaggagagcttacttttcttttttaaattacagataatataaagtgttttttaaaaataaaa 49832646  T
Q  128 taagtgtgattgaagtattatat 150  Q
    |||||||||||||||||||||||    
T  49832647 taagtgtgattgaagtattatat 49832669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 25268502 - 25268437
Alignment:
Q  35 tatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacgga 99  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||| | |||||||||||||||    
T  25268502 tatttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacgga 25268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 35349464 - 35349536
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| ||||||| |||||||||  |||||| ||| ||||||||||||||||| ||||||||||||||||    
T  35349464 taagggtgtgtttggatggagggtttaagaggggagggg-gggagggtttacttttcatttttaaattacggac 35349536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 2470940 - 2470831
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgatt----gaagtattatatggtcgtttatct 162  Q
    |||| |||||||||||| |||||||||||   ||||||| |||||||||||||||||| | ||| |||||||    |||||||||||||   |||||||     
T  2470940 gggaaggtttacttttcttttttaaattatcaactatataacatgtttttctaaaatacactaattgtgattgaaggaagtattatatgactgtttatca 2470841  T
Q  163 tgttaatatg 172  Q
    ||||||||||    
T  2470840 tgttaatatg 2470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 35928056 - 35927988
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaa-gggagggagggtttacttttcgtttttaaattac 96  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| | |||||||||| ||||||||||||    
T  35928056 agggtgtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaattac 35927988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 28770852 - 28770920
Alignment:
Q  157 ttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||| |||||||||||||| |||||||||||||||||||| ||  || |||||||||||||||| |||||    
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcataatg--tgtaatttaaaaataaaaaataaac 28770920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 2858932 - 2859017
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtt 113  Q
    ||||||| ||||||| |||||||||| |||| ||||||||| |||||||||||||| ||| |||||||| |||  ||||| |||||    
T  2858932 agggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgtt 2859017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 7444489 - 7444550
Alignment:
Q  40 ggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||||||| | ||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  7444489 ggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacggac 7444550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 41498649 - 41498561
Alignment:
Q  29 agggtgtatttggattgagggtttagaagggg-aagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttt 115  Q
    ||||||| ||||||| ||| |||||| ||||| ||||||||| ||| |||||||||| ||||||||||||||||  ||||| |||||||    
T  41498649 agggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgtttt 41498561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 47261519 - 47261443
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    ||||||||||| ||||||| | || |||||||||||||| ||||| |||||||| ||||| |||||||| |||||||    
T  47261519 tctaagggtgtgtttggatgggggatttagaaggggaagagagggtagggtttaattttcttttttaaagtacggac 47261443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 33643268 - 33643391
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| ||| |||||| ||||||| ||||||||||| |||| |  | ||||||  ||||||||||||| |  || | | |||||||| ||||||| ||    
T  33643268 agggtgtgtttagattgaaggtttaggaggggaagggaagggatgactcacttttattttttaaattacgaaaaatgtaaaatgtttttttaaaataaat 33643367  T
Q  128 taagtgtgattgaagtattatatg 151  Q
    |||||||  |||||||||||||||    
T  33643368 taagtgtttttgaagtattatatg 33643391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 43552109 - 43552067
Alignment:
Q  155 gtttatcttgttaatatgttaactttttataaaacatttcata 197  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  43552109 gtttatcatgttaatatgttaactttttaaaaaacatttcata 43552067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 20576136 - 20576205
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    |||| ||||||| |||||||||| ||||||||||| ||||| |||||  |||| ||||||||||||||||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggac 20576205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 20607463 - 20607410
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttact 79  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||    
T  20607463 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 35513033 - 35512969
Alignment:
Q  37 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| |||||||||| ||||||||||| ||||||| ||||||||  ||||||||||| ||||    
T  35513033 tttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaattatggac 35512969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 525344 - 525221
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatata 126  Q
    ||||||| |||||||||||||||||| | |||||||| ||| || ||| ||||||  ||||||||||||  || |  | | ||| ||||| ||||||| |    
T  525344 agggtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaattacaaacaacgtaaaatgttttttttaaaataaa 525245  T
Q  127 ttaagtgtgattgaagtattatat 150  Q
    |||||| || ||||||||||||||    
T  525244 ttaagtttgtttgaagtattatat 525221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 8530046 - 8529971
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 100  Q
    |||||| ||| |||||||  || |||||| ||||||||||||| ||  ||||||||||| ||||||||||||||||    
T  8530046 ctaaggatgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggac 8529971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 51303381 - 51303424
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg 69  Q
    |||||||||| |||||||||||||||||| |||||| |||||||    
T  51303381 ctaagggtgtgtttggattgagggtttaggaggggaggggaggg 51303424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 1085485 - 1085562
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttactttt-cgtttttaaattacggac 100  Q
    ||||||||||| ||||||| |||||||||| ||||| | ||| ||||||  |||||||| | ||||||||||||||||    
T  1085485 tctaagggtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacggac 1085562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 7444744 - 7444667
Alignment:
Q  24 atctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    ||||||| |||| |||||||  || |||||||| |||||| ||||| |||||||| ||||| |||| |||||||||||    
T  7444744 atctaagagtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggac 7444667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 40709292 - 40709361
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacg 97  Q
    ||||||| |||||||| | ||||||  |||||||||||| |||||  ||||||||| |||||||||||||    
T  40709292 agggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacg 40709361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 40709532 - 40709403
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaag 131  Q
    |||| |||||||||||| ||||| ||||||| ||||||  || | ||||||  ||||||||||| | || || | | | ||||||  |||| | ||||||    
T  40709532 gtgtgtttggattgaggatttaggaggggaacggaggggagggtcacttttattttttaaattatgaacaatgtaaaaggttttttaaaaagaaattaag 40709433  T
Q  132 tgtgattgaagtattatatggtcgtttatc 161  Q
    |||  ||||||||||||||| || ||||||    
T  40709432 tgtttttgaagtattatatgatcatttatc 40709403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 41676486 - 41676453
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||||||||||| ||||||||||||||||    
T  41676486 gggagggtttacttttcatttttaaattacggac 41676453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 42742460 - 42742508
Alignment:
Q  179 ttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    ||||| ||||||||| |||||||||   ||||||||||||||||||||||||    
T  42742460 ttttaaaaaacattttatagtgtct---atttaaaaataaaaagtaaactct 42742508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 44210946 - 44210979
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||||||||||||||||||||||| ||||    
T  44210946 gggagggtttacttttcgtttttaaattatggac 44210979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 20607223 - 20607263
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg 69  Q
    ||||||| |||| ||||||||||||| ||||||||||||||    
T  20607223 agggtgtgtttgaattgagggtttaggaggggaagggaggg 20607263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 24560213 - 24560419
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||||| | |||||||||||||||||    
T  24560213 tctaagggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaat 24560312  T
Q  124 atattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    | ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||||    
T  24560313 aaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagt 24560412  T
Q  224 aaactct 230  Q
    |||||||    
T  24560413 aaactct 24560419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 41110567 - 41110366
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| ||||||||||||||||   |||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||     
T  41110567 taagggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataa 41110468  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||| ||||||||||||| | ||||||||||| ||||||||    
T  41110467 attaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaa 41110368  T
Q  226 ac 227  Q
    ||    
T  41110367 ac 41110366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 25 - 227
Target Start/End: Original strand, 21773778 - 21773981
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    ||||||||| | |||||||||| ||||||| ||||||||||| ||| |||| |||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  21773778 tctaagggtatgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaat 21773877  T
Q  124 atattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    | ||||||||||||||||| |||||||| | ||||||| ||| ||||||||||||||||| |||||||||| ||||||  | ||||||||||||||||||    
T  21773878 aaattaagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagt 21773977  T
Q  224 aaac 227  Q
    ||||    
T  21773978 aaac 21773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 30200343 - 30200133
Alignment:
Q  25 tctaagggtgtatttggattgaggg----tttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttcta 119  Q
    ||||||||||| |||||||||||||    | ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  30200343 tctaagggtgtgtttggattgagggagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttcta 30200244  T
Q  120 aaatatattaagtgtgattgaagtattatatg---gtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    ||||| || |||||||||| ||||| ||||||   || ||||||  ||||||||||| ||||||||| |||||||||||||||||| | |||||||||||    
T  30200243 aaataaatcaagtgtgattaaagtactatatgatcgttgtttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaat 30200144  T
Q  217 aaaaagtaaac 227  Q
     |||| |||||    
T  30200143 gaaaactaaac 30200133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 14897984 - 14898128
Alignment:
Q  37 tttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    ||||||||||| |||||| |||||||||||| |||   |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  14897984 tttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagtgtg 14898083  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaacttt 180  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||||    
T  14898084 attgaagtattatatgatcgtttatcgtgttaatatattaacttt 14898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 25655218 - 25655015
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| ||||||||||||||| |  ||| |||||||||| ||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||     
T  25655218 taagggtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataa 25655119  T
Q  126 attaagtgtgattgaagtatt--atatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    |||||||||||||||||||||  ||||| || |||||| | |||||||||||||| || | |||||||||| ||||||  | ||| ||||||| ||||||    
T  25655118 attaagtgtgattgaagtattatatatgatcatttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagt 25655019  T
Q  224 aaac 227  Q
    ||||    
T  25655018 aaac 25655015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 214
Target Start/End: Complemental strand, 41040164 - 41040008
Alignment:
Q  59 ggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtt 157  Q
    |||||||||| |||||||||||||||| |||||||||||||| || || ||||| |||| ||||||| | |||| ||||||||||||||||||| | |||    
T  41040164 ggaagggaggagagggtttacttttcgcttttaaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattatatgattgtt 41040065  T
Q  158 tatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaa 214  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  41040064 tatcatgttaatatgttaactttttataaaatatttcatagtgtctgtaatttaaaa 41040008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 220633 - 220442
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    ||||||| |||||||||| ||| |||||||||| ||  |||||||||| ||||||||||||||||||| | |||||||||||||||||| || |||| ||    
T  220633 tttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaatcaagtatg 220534  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||| ||||| | | ||||||  ||||||||||||||||||||| ||||||||||||| |||| | ||||||||||| |||| |||||    
T  220533 attgaagtgttataagattgtttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaac 220442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 37102383 - 37102194
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgttttt-ctaaaatatat 127  Q
    ||||||| |||||||||||||||||| |||||||||         ||||||| || ||||||||||||||||||||| |||||||||| |||||||| ||    
T  37102383 agggtgtgtttggattgagggtttaggaggggaagg---------tttacttatcttttttaaattacggactatataacatgttttttctaaaataaat 37102293  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
     ||||||| ||||||||||||||| ||||| ||  ||||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||| |||||    
T  37102292 caagtgtggttgaagtattatatgatcgtt-attatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 37102194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 221
Target Start/End: Complemental strand, 9312715 - 9312522
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacat---gtttttctaaaat 123  Q
    |||||| || |||||||||||||||||| |||||| |||||||    |||  ||||| |||||||||||| |||||||| ||||   | |||||||||||    
T  9312715 taagggagtgtttggattgagggtttaggaggggaggggaggg----tttgattttcttttttaaattaccgactatataacatcatgattttctaaaat 9312620  T
Q  124 atattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
    | |||||||||||||  ||||||||||| | ||||||| ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||    
T  9312619 aaattaagtgtgatttgagtattatatgattgtttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaatgaaaa 9312522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 67 - 215
Target Start/End: Complemental strand, 2387965 - 2387817
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||||||||||||| ||| ||||| |||| |||||| |||||||||||||||||| ||||||||||||| || ||||||||| ||||||||| ||||    
T  2387965 gggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgtgattaaattattatatgatcgtttatcatgtt 2387866  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaa 215  Q
    | ||| ||||||| ||| |||||||| ||||||||| | ||||||||||    
T  2387865 attattttaacttattaaaaaacattccatagtgtccgtaatttaaaaa 2387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 16275875 - 16275747
Alignment:
Q  102 atatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgt 201  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| |||    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgt 16275776  T
Q  202 ctgcaatttaaaaataaaaagtaaactct 230  Q
    | | ||||||||||| || ||| ||||||    
T  16275775 ccgaaatttaaaaatgaatagtgaactct 16275747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 216
Target Start/End: Complemental strand, 18654847 - 18654656
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttc-gtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||| |||| |||| ||||||||||||| ||||||||||| ||||| ||||  ||| |  ||||||||||||||||||||| |||||||| |||||||||    
T  18654847 taagagtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaata 18654748  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
     ||||||||| |||||||||||||||| || |||||| |||||||||||||||| || | |||| |||| |||| ||| | |||||||||||    
T  18654747 aattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaat 18654656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 216
Target Start/End: Complemental strand, 27542166 - 27541987
Alignment:
Q  38 ttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 136  Q
    |||||| |||||||||  ||||| |||||||| || ||||  ||||| ||||||||||| | ||||||| |||| ||||||||||||| ||||| |||||    
T  27542166 ttggatcgagggtttacgaggggcagggaggggagagtttgtttttcttttttaaattatgaactatataacatatttttctaaaataaattaactgtga 27542067  T
Q  137 ttgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    ||||||||||||||| ||||||||| |||||||||||||  ||||||  ||  ||||||||||||||  |||||||||||    
T  27542066 ttgaagtattatatgatcgtttatcatgttaatatgttagatttttaacaagtatttcatagtgtctctaatttaaaaat 27541987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 28582753 - 28582610
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||| ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||||| |||| |||||||||||||| ||| ||    
T  28582753 agggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaat 28582654  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatat 171  Q
     ||||||| ||||||||||||||  ||||||||  |||||||||    
T  28582653 caagtgtggttgaagtattatattatcgtttattatgttaatat 28582610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 227
Target Start/End: Original strand, 52473923 - 52474114
Alignment:
Q  37 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    ||||||||||| |||| | ||||||||  | ||||| ||| | ||||| ||||||||||||||| ||||| ||||||| || ||||||| ||||  ||||    
T  52473923 tttggattgagagtttgggaggggaagaaatgggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaattacatgtg 52474022  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||   ||||||| | ||||||||||||||||||| |||| |||||||||  || | ||||||||||||||||||||||    
T  52474023 attgaagtattatatgactgtttatcatattaatatgttaactttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaac 52474114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 37807129 - 37807289
Alignment:
Q  77 acttttcgtttttaaattacggactatatgacatgtttttctaaaatata-ttaagtgtgattgaagtattatatggtcgtttatcttgttaatatgtta 175  Q
    ||||||| |||||||| |||| ||||||| |||| |||||  |||||| | ||||||||||||||||||||||||| ||||||||| ||||||||| |||    
T  37807129 acttttcttttttaaactacgaactatataacat-tttttaaaaaataaaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatatta 37807227  T
Q  176 actttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactctgtcctct 237  Q
    |||||||| ||||||||||||||||||   ||||||||||  ||||||||||  ||||||||    
T  37807228 actttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaagtaaacattgtcctct 37807289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 221
Target Start/End: Original strand, 52185060 - 52185207
Alignment:
Q  73 gtttacttttcgtttttaaattacggactatatgacatgtttt-tctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatat 171  Q
    ||||||||||||||||||||||||  | ||||| ||||||||| ||||||||| ||||| | | |||||||||||||||| | ||||||| |||||||||    
T  52185060 gtttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgttaatat 52185159  T
Q  172 gttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
    ||||||||||||||||| ||||  |||||||   ||||||||||||||||    
T  52185160 gttaactttttataaaatattt--tagtgtccataatttaaaaataaaaa 52185207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 227
Target Start/End: Original strand, 651737 - 651929
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    |||||||||| |||||||||||||||||| |||||        ||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||     
T  651737 ctaagggtgtgtttggattgagggtttaggagggg--------gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataa 651828  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    ||||||||||||| || ||||||| | || ||| || ||||| ||| |||| |||||  ||||||||||||||| ||   |||||||||| || ||||||    
T  651829 attaagtgtgattaaaatattatacgatcctttgtcatgttattattttaa-tttttcaaaaacatttcatagtttccataatttaaaaacaataagtaa 651927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 46204894 - 46205033
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    ||||||| |||||||||| ||| |||| || | ||| ||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||||||||||    
T  46204894 tttggatcgagggtttagcaggagaagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagtgtg 46204993  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgtta 175  Q
    |||||||||||||||| || |||| | | |||||||||||    
T  46204994 attgaagtattatatgatcatttaacatattaatatgtta 46205033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 46556182 - 46556344
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtat--tatatggtcgtttatcttg 164  Q
    ||||| ||||| ||||| |||||||||||| |||||||| | ||||||||| |||||| ||| ||||||||||||||||  ||||||  ||||| || ||    
T  46556182 gggagagtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattatatatgaccgtttgtcatg 46556281  T
Q  165 ttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||| ||||||||||| |||| || |||||||||| | |||| |||||| ||||||||||    
T  46556282 ttaatatcttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaac 46556344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 36569067 - 36568946
Alignment:
Q  108 catgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaa 207  Q
    ||||||||||||||||| |||||||||||||||| ||||||| | | ||||||| ||||||||||||||||||||  |||||||||||||||||  | ||    
T  36569067 catgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgttcgaaa 36568968  T
Q  208 tttaaaaataaaaagtaaactct 230  Q
    ||||||||| |||| ||||||||    
T  36568967 tttaaaaatgaaaa-taaactct 36568946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 43005981 - 43005814
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| ||||||||||||||||| ||||| |||| | | |||| |||| ||||| |||||||||| |  ||||||| |||| ||||||||||||| |||     
T  43005981 ggtgtgtttggattgagggtttataagggaaaggaaagagaggatttaattttcttttttaaattccaaactatataacatatttttctaaaataaattt 43005882  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcata 197  Q
    | | |||||||||||||||||| |  |||||| | ||||||||||||||||||| |||| ||||||||    
T  43005881 aatttgattgaagtattatatgatattttatcatattaatatgttaactttttaaaaaatatttcata 43005814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 55327422 - 55327579
Alignment:
Q  80 tttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactt 179  Q
    |||| |||||||||||||||||| || ||||| |||||| ||||| || || ||||||||||| |||||||| ||||||||  |||||||| | ||||||    
T  55327422 tttcttttttaaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattatatgttcgtttattatgttaatacgctaactt 55327521  T
Q  180 tttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactctgtcctct 237  Q
    |||| ||||||||||||| |||| |  |||||||||  ||||  ||||||| ||||||    
T  55327522 tttaaaaaacatttcataatgtccgtgatttaaaaacgaaaaccaaactctctcctct 55327579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 10748484 - 10748346
Alignment:
Q  85 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatg-------gtcgtttatcttgttaatatgttaac 177  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||  ||||||||||||        || |||||| |||||||||||||||    
T  10748484 tttttaaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattatatgaccttttatcatttatcatgttaatatgttaac 10748385  T
Q  178 tttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    |||||| ||||||||| ||| || | | |||||||||||    
T  10748384 tttttaaaaaacattttataatgcccgtaatttaaaaat 10748346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 40464115 - 40463919
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||||| | |||||||||||||  || ||||  ||||| || ||||||||||| ||| ||||| | || ||| || |||| ||||||||||||| ||    
T  40464115 agggtgtatctcgattgagggtttatgagaggaatagaggggagagtttacttttcttttctaaatcaagggctacataacatatttttctaaaataaat 40464016  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagta 224  Q
    |||||| ||||||| | ||||||| | ||||||| ||||| | | ||||  ||||| |||||| || |||||||| | ||||||||||| |||||||    
T  40464015 taagtgagattgaatttttatatgattgtttatcatgttattgttttaatattttaaaaaacaatttatagtgtccgtaatttaaaaatgaaaagta 40463919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 54574605 - 54574483
Alignment:
Q  24 atctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    |||| ||||||| |||||||||||||||||| | |||||||||  |    |||  ||||| ||||| |||||| |||||||| ||| |||||||||||||    
T  54574605 atcttagggtgtgtttggattgagggtttaggaagggaagggatag----tttgtttttctttttttaattacagactatataacacgtttttctaaaat 54574510  T
Q  124 atattaagtgtgattgaagtattatat 150  Q
    | |||||| ||||||||||||||||||    
T  54574509 aaattaagcgtgattgaagtattatat 54574483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 24253966 - 24253894
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  24253966 agggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggac 24253894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 227
Target Start/End: Original strand, 12790381 - 12790572
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 136  Q
    |||||||||||||||||| || ||||| ||| |  |||||||||||| |||||| |||   | |||||| ||||||||||||| |||| ||||||||| |    
T  12790381 tttggattgagggtttaggagaggaagagagaggaggtttacttttcttttttatattgtaggctatataacatgtttttctataataaattaagtgtaa 12790480  T
Q  137 ttgaagtattatatggtcgtttatcttgttaatatgttaa-ctttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    | |||||| |||||| || || ||| ||||| ||| ||||  |||||| |||| |||||||| |||    |||||||||  |||||||||||    
T  12790481 tcgaagtaatatatgatctttcatcatgttattattttaatttttttaaaaaatatttcataatgttcataatttaaaatcaaaaagtaaac 12790572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 34641237 - 34641162
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  34641237 ctaagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggac 34641162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 6803456 - 6803323
Alignment:
Q  18 aataaaatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    |||||| | |||| |||| |||||||||| ||||||| |||||||| |||| ||| ||||| ||||| |||||||||||| ||||||   | | ||||||    
T  6803456 aataaactttaagtgtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattacagactatgcaataagttttt 6803357  T
Q  117 ctaaaatatattaagtgtgattgaagtattatat 150  Q
     ||||||| |||| ||||||||||| ||||||||    
T  6803356 ataaaataaattatgtgtgattgaactattatat 6803323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 24560461 - 24560373
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||| ||||||| |||||||||| ||||||| ||| ||||| ||||||||||| |||||||||||| |||  ||||| ||||||||    
T  24560461 agggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttt 24560373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 26136025 - 26135969
Alignment:
Q  45 gagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 100  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  26136025 gagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggac 26135969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 28581183 - 28581254
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 96  Q
    ||||| |||| ||||||| ||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||    
T  28581183 ctaagagtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattac 28581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 150
Target Start/End: Complemental strand, 10943850 - 10943736
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||  ||||||||||||| || ||   | |||||||| ||||||| |||||||||     
T  10943850 tttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtgtt 10943751  T
Q  136 attgaagtattatat 150  Q
     ||||||||||||||    
T  10943750 tttgaagtattatat 10943736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 41110323 - 41110393
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 100  Q
    ||||| ||||||| |||| ||||| ||||||||||||| || |||||||||||| ||||||||||||||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggac 41110393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 13083005 - 13082899
Alignment:
Q  129 aagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttt--------tataaaacatttcatagtgtctgcaatttaaaaataaaa 220  Q
    |||||| |||||||||||||||| ||||||||  |||||||||||||||||||         | |||||||||||||||||| | | |||||||||||||    
T  13083005 aagtgtaattgaagtattatatgatcgtttattatgttaatatgttaacttttaaaaaataaaaaaaacatttcatagtgtccgtattttaaaaataaaa 13082906  T
Q  221 agtaaac 227  Q
    | |||||    
T  13082905 attaaac 13082899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 55428615 - 55428551
Alignment:
Q  37 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    |||||||||||||||||| ||||||||||| |||| | |||||||||| | ||||||||||||||    
T  55428615 tttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggac 55428551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 44412357 - 44412484
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    ||||||||||| |||| ||||||||||||| |||||||| ||||| |||  | | ||||  ||||||||||||| || || | | |  ||||| ||||||    
T  44412357 tctaagggtgtgtttgaattgagggtttaggaggggaagagaggggaggactcattttttatttttaaattacgaacaatgtaaaacatttttttaaaat 44412456  T
Q  124 atattaagtgtgattgaagtattatatg 151  Q
    | |||||||||  |||||||||||||||    
T  44412457 aaattaagtgtttttgaagtattatatg 44412484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 17474452 - 17474330
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||| ||| ||||||||||||||| || ||||||||||| ||||| ||| ||||||  ||||||||||||| |  || | | || |||||  ||||||     
T  17474452 taaggatgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaataa 17474353  T
Q  126 attaagtgtgattgaagtattat 148  Q
    |||||||||  ||||||||||||    
T  17474352 attaagtgtttttgaagtattat 17474330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 24253717 - 24253789
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaaggga--gggagggtttacttttcgtttttaaatta 95  Q
    ||||||||||| |||||||||||||||||| |||| ||||||  ||||| ||| ||||||  |||||||||||    
T  24253717 tctaagggtgtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaatta 24253789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 37236961 - 37237061
Alignment:
Q  66 agggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgt 165  Q
    |||||||| ||||||||| |||||||||||| |||  ||  | ||||||||  |||||| ||||||||||||||||||| || ||| || |||||| |||    
T  37236961 agggagggcttacttttcatttttaaattacagacgctacaaaatgtttttg-aaaataaattaagtgtgattgaagtactaaatgatcatttatcatgt 37237059  T
Q  166 ta 167  Q
    ||    
T  37237060 ta 37237061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 51819285 - 51819228
Alignment:
Q  112 tttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaat 169  Q
    ||||| ||||||| ||| |||||||||||||||||||| | ||||||||| |||||||    
T  51819285 tttttttaaaataaatttagtgtgattgaagtattatacgatcgtttatcatgttaat 51819228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 52474141 - 52474088
Alignment:
Q  47 gggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacgga 99  Q
    |||||||| |||||||||||| |||||||||||||||  |||||||||||||||    
T  52474141 gggtttaggaggggaagggagaggagggtttactttttatttttaaattacgga 52474088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 18654600 - 18654672
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| |||| ||| || |||||||||||  |||| ||||||||||||||||    
T  18654600 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggac 18654672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 21090312 - 21090192
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| |||||||||| ||||||| || |||||||||| ||||  | ||||||  ||||||||||| | || || | | || ||||| ||||||| |||||    
T  21090312 gtgtgtttggattgatggtttaggagaggaagggaggagaggactcacttttattttttaaattatgaacaatgtaaaatatttttttaaaataaattaa 21090213  T
Q  131 gtgtgattgaagtattatatg 151  Q
    ||||  |||||||||||||||    
T  21090212 gtgtttttgaagtattatatg 21090192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 41414076 - 41414216
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||| | ||| |||||||||||||| |||| |||||| ||||||| | ||||||  ||||||||||| | || |  | | |||||||| |||||||     
T  41414076 taagggtatgtttagattgagggtttaggagggaaagggaggggagggctcacttttattttttaaattatgaacaaggtaaaatgtttttttaaaataa 41414175  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    || ||| ||  ||||||||||||||| || |||||| ||||    
T  41414176 atcaagcgtttttgaagtattatatgatcatttatcatgtt 41414216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 42699807 - 42699723
Alignment:
Q  77 acttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatc 161  Q
    |||||| |||||||||||||| || |||| | || |||||  |||||| |||||||||  ||||||||||||||| || ||||||    
T  42699807 actttttgtttttaaattacgaacaatataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatc 42699723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 27541939 - 27541998
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaatta 95  Q
    |||||||||||||||||| ||||||||||||| || |||| || |||| |||||||||||    
T  27541939 tttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaatta 27541998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 40858604 - 40858703
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||| | ||||||  ||||||||||||| || || | | |||||||| ||||||| ||| |||||  ||||||||||||||| || |||||| ||||    
T  40858604 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgtt 40858703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 154
Target Start/End: Original strand, 44302942 - 44302977
Alignment:
Q  119 aaaatatattaagtgtgattgaagtattatatggtc 154  Q
    ||||||||| ||||||||||||||||||||||||||    
T  44302942 aaaatatatgaagtgtgattgaagtattatatggtc 44302977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 51819147 - 51819206
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattac 96  Q
    ||||||| || |||||||||||||||| ||||| || |||| ||||| ||||||||||||    
T  51819147 tttggatggaaggtttagaaggggaagagaggggggatttatttttcatttttaaattac 51819206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 54996881 - 54996786
Alignment:
Q  68 ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    |||||| ||||||||| |||||||||||| || ||||  | |||||| | ||||||  || ||||||||||||||||||||||| || |||||| ||||    
T  54996881 ggaggggttacttttcttttttaaattacagattata--aaatgtttat-taaaatgaatgaagtgtgattgaagtattatatgatcatttatcatgtt 54996786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 5903546 - 5903604
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttc 83  Q
    |||||||||| |||||||||||| ||||  ||||||||| | |||||||||||||||||    
T  5903546 ctaagggtgtgtttggattgaggatttaagaggggaaggcaggggagggtttacttttc 5903604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 31684365 - 31684399
Alignment:
Q  107 acatgtttttctaaaatatattaagtgtgattgaa 141  Q
    |||||||||||||||||| ||||||||||||||||    
T  31684365 acatgtttttctaaaataaattaagtgtgattgaa 31684399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 25654971 - 25655039
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacg 97  Q
    ||||||||||| ||| |||  ||||| |||||||||||||| |||||||||||||| |||||| ||||||    
T  25654971 agggtgtatttagatggaga-tttaggaggggaagggaggggagggtttacttttcatttttatattacg 25655039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 30200127 - 30200176
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  30200127 gggagggtttagttttcatttttaaattacggacactatgaaatgttttt 30200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 37102188 - 37102237
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  37102188 gggagggtttagttttcatttttaaattacggacactatgaaatgttttt 37102237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 28581291 - 28581231
Alignment:
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||| |||| |||||| | | |||| ||||||||||| |||| |||||    
T  28581291 aatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaac 28581231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 39436 - 39232
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||     
T  39436 taagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataa 39337  T
Q  126 attaagtgtgattgaag---tattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaag 222  Q
    |||||||||||||||||   ||||||||| || |||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||||    
T  39336 attaagtgtgattgaagaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaag 39237  T
Q  223 taaac 227  Q
    |||||    
T  39236 taaac 39232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 39186 - 39275
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg--agggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||| ||||||| |||||||||| |||||||  |||||  |||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  39186 agggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttt 39275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 32 - 227
Target Start/End: Complemental strand, 33655349 - 33655153
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| |||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || |||||| |||||||||||||||||| |||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataaattaa 33655250  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||||||||    
T  33655249 gtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 33655153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 58 - 226
Target Start/End: Complemental strand, 41497172 - 41497003
Alignment:
Q  58 gggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgt 156  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| || |    
T  41497172 gggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcat 41497073  T
Q  157 ttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    ||||| |||||||||||||| |||||| |||||||||| || |||| | |||||||||||||||||||||    
T  41497072 ttatcatgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaa 41497003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 1051749 - 1051556
Alignment:
Q  22 aaatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaa 120  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||| ||||| ||||||||||||| ||||||| || |||||||||||    
T  1051749 aaatctaagggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaa 1051650  T
Q  121 aatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    |||| ||||||||||||||||| |||||||| | ||||||| || |||||||||||||||||| |||||||||||| ||||| | |||||||||||    
T  1051649 aataaattaagtgtgattgaagcattatatgattgtttatcatg-taatatgttaactttttaaaaaacatttcat-gtgtccgtaatttaaaaat 1051556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 13771192 - 13770994
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| ||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||     
T  13771192 taagggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataa 13771093  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    |||||||||||||  ||| ||||||  | ||||||| ||||||||||||||||||||||  || |||| |||||||| | ||||||||||||| ||||||    
T  13771092 attaagtgtgattcgagtgttatatcattgtttatcatgttaatatgttaactttttat--aatattttatagtgtccgtaatttaaaaataataagtaa 13770995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 37 - 226
Target Start/End: Complemental strand, 34235239 - 34235053
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatattaagtgtg 135  Q
    |||||||||||||||||| ||| ||  |||||  | ||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||    
T  34235239 tttggattgagggtttaggaggaga--ggagg--gtgtttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgtg 34235144  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    |||||||||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  34235143 attgaagtattatatgattgtttatcatattaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaa 34235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 40196769 - 40196577
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||||||||||||||||||||||||| | ||||||          ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  40196769 tctaagggtgtatttggattgagggtttgggagggga----------ggtttactttttgtttttaaattacggaatatataacatgtttttctaaaata 40196680  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagta 224  Q
     |||||||||||||||||||||||||| | |||||||  ||| |||||||||||||||||||||||||| |||||||| | |||| |||||| |||||||    
T  40196679 aattaagtgtgattgaagtattatatgattgtttatcaggttgatatgttaactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagta 40196580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 47390855 - 47391058
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||    
T  47390855 agggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacat 47390954  T
Q  128 taagtgtgattgaagtattatatg-gtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    ||| ||||||||||||||||||||  | ||||||| ||||||||||||||| ||||| ||||  ||| |||||||| | ||||||||||| ||||  |||    
T  47390955 taattgtgattgaagtattatatgacttgtttatcatgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaaccaaa 47391054  T
Q  227 ctct 230  Q
    ||||    
T  47391055 ctct 47391058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 226
Target Start/End: Complemental strand, 24970407 - 24970211
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| |||||||||||||||||| ||||    ||||||| | ||||  ||||| ||||||||||| ||| ||||| |||||||||||||||||| ||||    
T  24970407 ggtgtgtttggattgagggtttaggagggtttaggagggaagagtttgtttttcttttttaaattatggattatataacatgtttttctaaaataaatta 24970308  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||| |||||||||| || | ||||||||||| |||||||||    
T  24970307 agtgtgattgaagtattatatgatcgtttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 24970211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 67 - 230
Target Start/End: Original strand, 43230275 - 43230437
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||||| |||||||| |||||| | ||||||||| ||||    
T  43230275 gggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagtgcgattgaagaattatacgatcgtttatcatgtt 43230374  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    ||||||||||||||| | |||| | |||| |||||| | |||||||||||||||||||||||||    
T  43230375 aatatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaaactct 43230437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 39856111 - 39855976
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||     
T  39856111 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataa 39856012  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatc 161  Q
    ||||||||||| | |||||||||||| || ||||||    
T  39856011 attaagtgtgacttaagtattatatgatcatttatc 39855976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 37417871 - 37417705
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    ||||||||||| |||||||||||||||||| |||||| ||         |||||||||| ||||||||| ||||||||||| ||||||||||| ||| ||    
T  37417871 tctaagggtgtgtttggattgagggtttaggaggggatgg---------tttacttttcatttttaaataacggactatataacatgtttttcaaaatta 37417781  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtg 200  Q
      ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  37417780 agttaagtgtgattgaagtattatatgatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 37417705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 202
Target Start/End: Complemental strand, 34228563 - 34228388
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga-ctatatgacatgtttttctaaaatata 126  Q
    ||||||| |||| ||||| ||||||| ||| |||||||||| ||| |||||||||| |||| |||||||||| |||||| |||||||||||||||||| |    
T  34228563 agggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaa 34228464  T
Q  127 ttaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaact-ttttataaaacatttcatagtgtc 202  Q
    ||||||||||||||||||||||||| | | ||||| | |||||||||||||| |||||||||||| |||||||||||    
T  34228463 ttaagtgtgattgaagtattatatgattgcttatcatattaatatgttaacttttttataaaaca-ttcatagtgtc 34228388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 25887192 - 25887395
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||  |||||||||||||| ||| |||  ||||| ||| ||||| ||||||||||| |||||||||||||||||| ||    
T  25887192 agggtgtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaataaat 25887291  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttt-tataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    |||||||||||| ||||||||||| | ||||||| | |||||||||||||||||  | ||||||||||||  | |  | ||||||||||| ||| |||||    
T  25887292 taagtgtgattggagtattatatgattgtttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgtaaa 25887391  T
Q  227 ctct 230  Q
    ||||    
T  25887392 ctct 25887395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 4833703 - 4833576
Alignment:
Q  100 ctatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagt 199  Q
    |||||| ||||||  || ||||||| ||||| ||||||| |||||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||    
T  4833703 ctatataacatgtaattttaaaataaattaaatgtgatttaagtattatatgattgtttatcatgttaataggttaactttttataaaacatttcatagt 4833604  T
Q  200 gtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||| ||||||||||| ||||||||||    
T  4833603 gtctgtaatttaaaaatgaaaagtaaac 4833576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 225
Target Start/End: Original strand, 17852910 - 17853067
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||| ||||||||| ||||||||||||||| || || |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||||    
T  17852910 gggagggattacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattatatgatcgtttatcatgtt 17853009  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
      ||| ||| ||||||| ||||| ||||||||||   | ||||||||||| ||||||||    
T  17853010 gttattttatcttttta-aaaacttttcatagtgctcgtaatttaaaaatgaaaagtaa 17853067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 22163272 - 22163167
Alignment:
Q  109 atgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaat 208  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| || |||||||||||||||||| | |||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaat 22163174  T
Q  209 ttaaaaa 215  Q
    |||||||    
T  22163173 ttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 22221980 - 22221875
Alignment:
Q  109 atgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaat 208  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| || |||||||||||||||||| | |||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaat 22221882  T
Q  209 ttaaaaa 215  Q
    |||||||    
T  22221881 ttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 31571713 - 31571569
Alignment:
Q  30 gggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttct--aaaatata 126  Q
    |||||| |||||||||||||||||| |||||||| ||||| || ||||||||||| |||||||||||||||| |||| ||||| |||| |  |||| |||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaaaaata 31571614  T
Q  127 ttaagtgtgattgaagtattatatggtcgtttatcttgttaatat 171  Q
    ||||||||||||||||||||||||  | ||||||| |||||||||    
T  31571613 ttaagtgtgattgaagtattatataattgtttatcatgttaatat 31571569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 42306376 - 42306529
Alignment:
Q  70 agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaat 169  Q
    |||||||  ||||| |||||||||||| |||||||| |||||| ||||||||||| |||||| ||||||| ||||||||||    ||||||   ||||||    
T  42306376 agggtttgattttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattatat----gtttatgaggttaat 42306471  T
Q  170 atgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||| |||||||||| |||||||||||||||||| | ||||||||||| |||| |||||    
T  42306472 atgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaac 42306529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 18231693 - 18231784
Alignment:
Q  135 gattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||    
T  18231693 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaa 18231784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 181
Target Start/End: Original strand, 41008190 - 41008334
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatattaagtgt 134  Q
    ||||||||||||||||   |||||||||||||| ||  |||  ||||| ||||||||||||||||||||| ||||| ||||| ||||||| |||||||||    
T  41008190 tttggattgagggtttgagaggggaagggaggggagaatttgtttttcttttttaaattacggactatataacatgttttttttaaaataaattaagtgt 41008289  T
Q  135 gattgaagtattatatggtcgtttatcttgttaatatgttaactttt 181  Q
    ||||||||  ||||||| | ||||||| |||||||||||||||||||    
T  41008290 gattgaag--ttatatgattgtttatcatgttaatatgttaactttt 41008334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 10315719 - 10315831
Alignment:
Q  114 tttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaa 213  Q
    ||||||||||| |   |||||||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||| | | ||||||    
T  10315719 tttctaaaataaacccagtgtgattgaagtattatataatcgtttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaa 10315818  T
Q  214 aataaaaagtaaa 226  Q
    ||| |||| ||||    
T  10315819 aatgaaaaataaa 10315831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 228
Target Start/End: Complemental strand, 45940835 - 45940700
Alignment:
Q  93 ttacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatt 192  Q
    |||| |||||||| |||| ||||||||||||| ||||| ||| |||||||||||||||  ||| ||||  |||||||||  || |||| || ||||||||    
T  45940835 ttacagactatataacatatttttctaaaataaattaaatgtaattgaagtattatattatcgcttattatgttaatatactatctttgtaaaaaacatt 45940736  T
Q  193 tcatagtgtctgcaatttaaaaataaaaagtaaact 228  Q
    |||||||||| | ||| |||||||||||||||||||    
T  45940735 tcatagtgtccgtaatataaaaataaaaagtaaact 45940700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 37925837 - 37925963
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||||  ||||||||||||| || || | | |||||||| | ||||    
T  37925837 tctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaat 37925936  T
Q  124 atattaagtgtgattgaagtattatat 150  Q
    | |||||||||  ||||||||||||||    
T  37925937 agattaagtgtttttgaagtattatat 37925963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 40572475 - 40572277
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    ||||| |||||||||||||||||  ||||||| | | | |  ||||  ||||  |||| |||||||||||||||| | |||||| ||||||||| |||||    
T  40572475 ggtgtgtttggattgagggtttaagaggggaaagaaagaaaagtttgtttttatttttaaaattacggactatataatatgtttctctaaaataaattaa 40572376  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    | |||||| ||||||||||||  | |||||| ||||||||||||||| ||||| |||| |||| ||||  || | ||||||||||| |||  ||||||||    
T  40572375 gcgtgattaaagtattatatgaccttttatcatgttaatatgttaac-ttttaaaaaatattttatagcatccgtaatttaaaaatgaaatctaaactct 40572277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 176
Target Start/End: Original strand, 26365770 - 26365916
Alignment:
Q  32 gtgtatttggattgagggtttagaagggg-aagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    |||| |||||||||||||||||| ||||| |||||||  ||| ||||||||||| |||||| |||||  ||||||| |||| ||||||||||||| | ||    
T  26365770 gtgtgtttggattgagggtttaggagggggaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaaaataaacta 26365869  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaa 176  Q
     ||||||||||||||||||||| | |||| || ||||| ||| ||||    
T  26365870 ggtgtgattgaagtattatatgattgtttctcatgttattattttaa 26365916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 13425273 - 13425165
Alignment:
Q  119 aaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataa 218  Q
    |||||| ||||||||||| |||||||| ||||| | ||||||| |||||||||||| |||||| | |||| ||||  ||||||||| |||||||||||||    
T  13425273 aaaataaattaagtgtgaatgaagtataatatgattgtttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaatttaaaaataa 13425174  T
Q  219 aaagtaaac 227  Q
    ||| |||||    
T  13425173 aaaataaac 13425165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 33519045 - 33519186
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    ||||||| || ||||||| |||| ||||| |||||||||||||| |||| | ||||||  ||||||||||||| || |||| | |||||||| | |||||    
T  33519045 ctaagggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaata 33519144  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
     |||||||||  ||||||||||||||| || |||||| ||||    
T  33519145 aattaagtgtttttgaagtattatatgatcatttatcatgtt 33519186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 4833529 - 4833618
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttt 115  Q
    ||||||| | ||||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||  ||||| |||||||    
T  4833529 taagggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgtttt 4833618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 36267797 - 36267664
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||| | | ||||  ||||||||||||   | || | | ||||||||  ||||||||     
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattacaaccaatgtaaaatgttttttcaaaatatag 36267698  T
Q  128 taagtgtgattgaagtattatatggtcgtttatc 161  Q
    |||||||  ||||||||||||||| || ||||||    
T  36267697 taagtgtttttgaagtattatatgatcatttatc 36267664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 18231834 - 18231762
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 96  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||| |||||| |||||||||| ||||||||||||    
T  18231834 tctaagggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattac 18231762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 40196532 - 40196604
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||| | |||||||||||| |||||||||||||||| ||||| ||||||||||    
T  40196532 agggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggac 40196604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 41496957 - 41497045
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||| | |||||||||  |||||||||||||||| ||| || ||||||||    
T  41496957 agggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttt 41497045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 48881558 - 48881630
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||| || ||||||||| ||||||||||||||||    
T  48881558 agggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggac 48881630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 23029537 - 23029482
Alignment:
Q  69 gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    ||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  23029537 gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaata 23029482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 36267553 - 36267624
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacgga 99  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||| ||| ||||| |||||||||||||||    
T  36267553 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacgga 36267624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 18795835 - 18795721
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaag 131  Q
    |||| ||||||||||| ||||||||||||||||  |||| || ||  ||||| ||||||||||||| || |||| | |||||||| ||||| | || |||    
T  18795835 gtgtgtttggattgagagtttagaaggggaaggaggggaaggcttgattttcttttttaaattacgaacaatataaaatgtttttttaaaacaaatcaag 18795736  T
Q  132 tgtgattgaagtatt 146  Q
    ||| |||||| ||||    
T  18795735 tgttattgaattatt 18795721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 30592251 - 30592321
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattac 96  Q
    ||||||||||||||||| |||| ||||| |||| ||||| |||||||| ||||||||| ||||||||||||    
T  30592251 taagggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattac 30592321  T

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Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 147
Target Start/End: Original strand, 48151996 - 48152099
Alignment:
Q  41 gattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattg 139  Q
    ||||||||||||||||| ||||  || | ||  |||||| |||| ||||||||||||||    ||| |||||||||||||||||| ||| ||||||||||    
T  48151996 gattgagggtttagaagaggaaatgaagagaatgtttacctttcttttttaaattacgg----tataacatgtttttctaaaataaatttagtgtgattg 48152091  T
Q  140 aagtatta 147  Q
    ||||||||    
T  48152092 aagtatta 48152099  T

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Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 42306571 - 42306486
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    |||| |||||||||||||||||| |||||||  ||||| | |||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttt 42306486  T

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Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 13770948 - 13771020
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| |||||||||||| ||||| ||||||||||| |||||| ||||||| |  ||||||||||||||||    
T  13770948 agggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggac 13771020  T

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Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 33519292 - 33519224
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 96  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||| | ||||||||||    
T  33519292 agggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

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Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 28074100 - 28074175
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    |||||||||| |||||||||| ||||||| |||||||||||||| ||   | ||||||| ||||||||||||||||    
T  28074100 ctaagggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggac 28074175  T

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Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 18063721 - 18063667
Alignment:
Q  112 tttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||| ||||||| |||||||||||||||||||||||||| || |||||| ||||    
T  18063721 tttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 18063667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 225
Target Start/End: Complemental strand, 23116420 - 23116306
Alignment:
Q  112 tttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaaca-tttcatagtgtctgcaattt 210  Q
    ||||| ||||| | |||||||||||||||||||||||||  || |||||| ||||  ||| | || ||||||  ||||| ||| |||||||||| |||||    
T  23116420 tttttttaaaaaaaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaattt 23116321  T
Q  211 aaaaataaaaagtaa 225  Q
    |||||  ||||||||    
T  23116320 aaaaaagaaaagtaa 23116306  T

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Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 40282205 - 40282263
Alignment:
Q  37 tttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaatt 94  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||| ||||||||||    
T  40282205 tttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

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Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 45940658 - 45940744
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||| ||||||| || |||||||||||||||||||||| |  ||||||||||  |||||| |||||||||  ||||| ||||||||    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttt 45940744  T

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Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 47391102 - 47391028
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| ||||||| |||||||||  ||||||||||| ||||| ||||  ||||| ||||||||||||||||    
T  47391102 taagggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggac 47391028  T

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Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 10315652 - 10315709
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||| |||||||||| |||||||||| | |||||||| |||| |||||||||||||    
T  10315652 gggaggatttacttttcttttttaaatttcagactatataacatatttttctaaaata 10315709  T

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Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 31364285 - 31364237
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggagggagggtttacttt 81  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  31364285 gtgtgtttggattgagggtttaggaggggaaggga-ggagggtttacttt 31364237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 32872939 - 32872823
Alignment:
Q  114 tttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaa 213  Q
    ||||||||||| ||||||| | ||||||  || |||||   ||||||| ||||||||||||||||||||| |||  |||| ||| | |  | ||||||||    
T  32872939 tttctaaaataaattaagtttaattgaaagatgatatgagtgtttatcatgttaatatgttaactttttaaaaagtattttataatattcgtaatttaaa 32872840  T
Q  214 aataaaaagtaaactct 230  Q
    ||  |||||||||||||    
T  32872839 aaagaaaagtaaactct 32872823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 33655148 - 33655196
Alignment:
Q  68 ggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    |||||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  33655148 ggagggtttacttttcatttttaaattacggacactatgaaatgttttt 33655196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 37620776 - 37620896
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| |||||||||||||||| | ||||||||||| ||||| ||| ||||||  |||| |||||| | || || | | ||| |||| ||||||| ||||    
T  37620776 ggtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgattttttaaaataaatta 37620875  T
Q  130 agtgtgattgaagtattatat 150  Q
    | |||  ||||||||||||||    
T  37620876 aatgtttttgaagtattatat 37620896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 48015453 - 48015378
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggact 101  Q
    ||||||| | ||||||| ||||| |||| ||||||||||||  ||| | |||||||||||||||||||||| ||||    
T  48015453 taagggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattacagact 48015378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 20393693 - 20393763
Alignment:
Q  120 aaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaaca 190  Q
    ||||| |||||||||||||||||||||||||| || |||||  ||||| ||| | || |||| ||||||||    
T  20393693 aaataaattaagtgtgattgaagtattatatgatcatttataatgttactatttcaagttttcataaaaca 20393763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 35422198 - 35422136
Alignment:
Q  39 tggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 100  Q
    |||||||||||||||| |||| ||  ||| |||||||||||||||| |||| |||||||||||    
T  35422198 tggattgagggtttaggagggaaatagagtggagggtttacttttctttttaaaattacggac 35422136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 4835477 - 4835550
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacgga 99  Q
    ||||||||| ||| |||||||||||||| || | |||||| ||| | | ||||||||| |||||||||||||||    
T  4835477 taagggtgtgtttagattgagggtttaggagagaaagggaggggtgtgcttacttttcttttttaaattacgga 4835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 18127388 - 18127347
Alignment:
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgtta 167  Q
    |||||||||||||||||||||||||| || |||||| |||||    
T  18127388 attaagtgtgattgaagtattatatgatcatttatcatgtta 18127347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 25887444 - 25887368
Alignment:
Q  21 aaaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 97  Q
    |||| |||||||||| ||||| |  ||||||||| ||||||||||| ||||| |||||| |||| |||||||||||||    
T  25887444 aaaaactaagggtgtgtttgg-tgaagggtttaggaggggaagggaggggagagtttacatttcatttttaaattacg 25887368  T

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Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 31553287 - 31553234
Alignment:
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaa 220  Q
    ||||||||||||||||| ||||||||||||| |||| |  |||||||| |||||    
T  31553287 aatatgttaactttttaaaaaacatttcataatgtccgttatttaaaattaaaa 31553234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 48881795 - 48881758
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagg 64  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  48881795 taagggtgtgtttggattgagggtttaggaggggaagg 48881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 26 - 227
Target Start/End: Complemental strand, 31348568 - 31348366
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||||||| ||||||||||| |||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  31348568 ctaagggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaata 31348469  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagta 224  Q
     |||| ||||||||||| ||||||||| | ||||||| ||||||||||||| ||||||| |||||||||||||||||| | ||||||||||| |||||||    
T  31348468 aattatgtgtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagta 31348369  T
Q  225 aac 227  Q
    |||    
T  31348368 aac 31348366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 45741890 - 45742092
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| ||||||| | | | |||| |||||||||  ||||||||||||||||||||| || ||||||||||||||| ||    
T  45741890 agggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacggactatataacttgtttttctaaaataaat 45741989  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||||||||    
T  45741990 taaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 45742089  T
Q  228 tct 230  Q
    |||    
T  45742090 tct 45742092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 27 - 227
Target Start/End: Original strand, 54935065 - 54935268
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg--agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    ||||||||| |||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  54935065 taagggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaata 54935164  T
Q  125 tattaagtgtgattgaagta-ttatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
     ||||||||||||||||||| ||||||| ||||||||| | |||||||| |||||||||| || ||||||||||||||| | ||||||||||| |||| |    
T  54935165 aattaagtgtgattgaagtatttatatgatcgtttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaat 54935264  T
Q  224 aaac 227  Q
    ||||    
T  54935265 aaac 54935268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 27 - 221
Target Start/End: Original strand, 54320433 - 54320627
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 126  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||||||||  ||||| |||||||||||| ||||||||  ||||||||||||||||| |    
T  54320433 taagggtgtgtttggattgagggtttaggagggaaagggagggagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaa 54320532  T
Q  127 ttaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
    ||||||||||||| ||||||||||| | ||||||| |||||||||| |||||||||| ||||| |||||||||||| | ||||||||||| ||||    
T  54320533 ttaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaa 54320627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 37 - 221
Target Start/End: Original strand, 27735753 - 27735938
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    ||||||| |||||||||| ||||||||||| | ||||||||| ||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  27735753 tttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaagtgtg 27735852  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
    |||||||||||||||| || |||||| |||||||||| ||||| |||| ||||||||| |||||||| | ||||||||||| ||||    
T  27735853 attgaagtattatatgatcatttatcatgttaatatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaa 27735938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 1968605 - 1968450
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | ||||||||||||||||     
T  1968605 taagggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaataa 1968506  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttt 181  Q
    || | ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  1968505 atcaggtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttt 1968450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 26166937 - 26167111
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| ||||||| |||||| || ||||  ||||| |||||||||||| |||||||| |||||||| ||||||||| ||    
T  26166937 agggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattacagactatataacatgtttctctaaaataaat 26167036  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtc 202  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||| || | ||||||||||| ||||||    
T  26167037 taagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgtc 26167111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 32 - 227
Target Start/End: Complemental strand, 46007942 - 46007744
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| | |||||||| || ||||||| ||||||| |||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataaattaa 46007843  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttt-ataaaaca-tttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||| ||||||||||||||||| || |||||| |||||||||||||||||||| | |||||| ||||||  |||| | ||||||||||| ||||||||||    
T  46007842 gtgagattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaagtaaac 46007744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 49735695 - 49735517
Alignment:
Q  45 gagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagta 144  Q
    |||||||||| ||||||||||||||  |||||| ||||| |||||||| |||||||||||| |||||||||||||||||| || ||||||||| ||| ||    
T  49735695 gagggtttaggaggggaagggaggggaggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaata 49735596  T
Q  145 ttatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    ||||||  ||||||||| |||||||| |||||||||||| || |||||||||  |||| | ||||||||||| ||||||    
T  49735595 ttatattatcgtttatcatgttaataggttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagt 49735517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 47433953 - 47433766
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactata-tgacatgtttttctaaaatata 126  Q
    ||||||| ||||| |||| ||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||||| | |||||||||| ||||||| |    
T  47433953 agggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaataaa 47433854  T
Q  127 ttaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaa 215  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||| |||| |||||| |||||||| |||| ||||   ||||||||||    
T  47433853 ttaagtgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaa 47433766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 37711136 - 37711286
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga------gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaa 120  Q
    ||||||||| |||||||||||||||||| |||||||||||      ||||||||||  ||||| ||||||||||||||||||||| |||||||| |||||    
T  37711136 taagggtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaa 37711235  T
Q  121 aatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatat 171  Q
    |||| |||||||||||||||||||||||||| || |||||| |||||||||    
T  37711236 aataaattaagtgtgattgaagtattatatgatcatttatcatgttaatat 37711286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 226
Target Start/End: Original strand, 36151577 - 36151773
Alignment:
Q  30 gggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 128  Q
    ||||||||||| ||||||||||| | |||||||| || | |||||||||  | |  ||| |||||||| |||||||| |||||||||||||||||| |||    
T  36151577 gggtgtatttgaattgagggttttggaggggaagagatgagagggtttatgtatattttataaattacagactatataacatgtttttctaaaataaatt 36151676  T
Q  129 aagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | ||| |||||  ||||||    ||||||||||| |||||||||    
T  36151677 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaacttttaa-aaatcattttctagtgttcataatttaaaaatgaaaagtaaa 36151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 216
Target Start/End: Complemental strand, 5731077 - 5730886
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttc-gtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||| |||| |||| ||||||||||||| ||||||||||| ||||| ||||  ||| |  ||||||||||||||||||||| |||||||| |||||||||    
T  5731077 taagagtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaata 5730978  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
     ||||||||| |||||||||||||||| || |||||| |||||||||||||||| || | |||| |||| |||| ||| | |||||||||||    
T  5730977 aattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaat 5730886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 221
Target Start/End: Original strand, 29798286 - 29798478
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| |||||||||| ||||||| |||||||| ||| |||  ||||||||||  |||||||||||| |||||||| |||||||||||| ||||      
T  29798286 taagggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttcttaaatc- 29798384  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgtt-aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
       ||||||||||||||||||||||| ||||||||  |||| || ||||||| |||||| |||||||||||||||||| | ||||||||||| ||||    
T  29798385 ---aagtgtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 29798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 38 - 215
Target Start/End: Original strand, 16400809 - 16400987
Alignment:
Q  38 ttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 136  Q
    ||||||||||||||||| ||| |||||||||| ||| || ||||||  |||||| | |||  ||||||  |||||||||||||||||| ||||| | |||    
T  16400809 ttggattgagggtttaggaggagaagggaggggaggattcacttttattttttatactacaaactatacaacatgtttttctaaaataaattaattatga 16400908  T
Q  137 ttgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaa 215  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| |||  |||||||||||||   ||||||||||    
T  16400909 ttgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcatagtgtccctaatttaaaaa 16400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 45132739 - 45132573
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||| |||||| |||||| |||||||| |||| || |||||||||||| ||||||||||||||||||||| | ||||      |||||| ||    
T  45132739 agggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatgt------aaaataaat 45132646  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgt 201  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||| ||||||    
T  45132645 taagtgtgattgaagtattatatgatcgtttatcattttaatatgttaacttttta-aaaacatttcgtagtgt 45132573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 215
Target Start/End: Original strand, 6891373 - 6891547
Alignment:
Q  42 attgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattga 140  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||| |||||||| |||  | ||||| |||||||||||||||||| |||||||||||||||    
T  6891373 attgagggtttagaaggggaagagaggggatagtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattga 6891472  T
Q  141 agtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaa 215  Q
    ||||||||||| ||||||||  ||||| ||| |||| |||||  |||||| |||||||||||   ||||||||||    
T  6891473 agtattatatgatcgtttataatgttattattttaatttttttaaaaacaattcatagtgtccataatttaaaaa 6891547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 230
Target Start/End: Complemental strand, 17938355 - 17938149
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttcta-aaat 123  Q
    |||||||| | |||||||||||  ||||| ||||||||||||  ||| ||||||||||| ||||||||||||  ||||||| |||| ||||| |  ||||    
T  17938355 ctaagggtatgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaat 17938256  T
Q  124 atattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    | |||||||||||||||||||||||||| ||||||||| ||||| ||| |||| |||||| |||||||| |||| ||||   ||||||||||  |||| |    
T  17938255 aaattaagtgtgattgaagtattatatgatcgtttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaatt 17938156  T
Q  224 aaactct 230  Q
    |||||||    
T  17938155 aaactct 17938149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 35248738 - 35248839
Alignment:
Q  80 tttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactt 179  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |  |||||| |||||||| ||||||||    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaactt 35248837  T
Q  180 tt 181  Q
    ||    
T  35248838 tt 35248839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 227
Target Start/End: Complemental strand, 24565572 - 24565391
Alignment:
Q  45 gagggtttagaaggggaagggagggaggg-tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagt 143  Q
    |||||||||| ||||||||||||||| |  ||||| |||| |||||||||||||| |||||| ||||||||||||| ||||   | || |||||||||||    
T  24565572 gagggtttaggaggggaagggagggaagaatttacatttcttttttaaattacgggctatataacatgtttttctataataa--tgagcgtgattgaagt 24565475  T
Q  144 attatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||| | |||||||  ||||||| |||||||||||| ||| |||||| || | || | ||||||||||| ||||||||||    
T  24565474 attatatgtttgtttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaac 24565391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 230
Target Start/End: Original strand, 28332850 - 28333006
Alignment:
Q  74 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgt 173  Q
    |||||||||| ||||||||||||  ||||||| ||| ||||||||||| || ||||||| |||||||||||||||||| ||||||| |  |||||||||     
T  28332850 tttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgtttaccaggttaatatgc 28332949  T
Q  174 taactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    |||  ||||| |||| ||||| ||||||  | |||||||||| ||||||||||||||    
T  28332950 taatgttttagaaaatatttcgtagtgttggtaatttaaaaacaaaaagtaaactct 28333006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 230
Target Start/End: Original strand, 44784038 - 44784193
Alignment:
Q  74 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgt 173  Q
    |||||||||| ||||||||||||  || |||| ||| ||||||||||| || |||||||||||||||||||||||||| ||||||||   ||||||||||    
T  44784038 tttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatatgt 44784137  T
Q  174 taactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    ||||  |||| |||| ||||| ||||||  | ||||||||||  |||||||||||||    
T  44784138 taac-gtttagaaaatatttcgtagtgttcgtaatttaaaaacgaaaagtaaactct 44784193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 169
Target Start/End: Original strand, 56135746 - 56135890
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||||| | ||||  ||||||||||||| || || | | |||||||| |||||||    
T  56135746 ctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaata 56135845  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaat 169  Q
     |||||||||  ||||||||||||||| || |||||| |||||||    
T  56135846 aattaagtgtttttgaagtattatatgatcatttatcatgttaat 56135890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 221
Target Start/End: Complemental strand, 2248043 - 2247854
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| |||||||||||||||||| ||| |||| || ||||| ||||||||||| |||||||||||| || ||||| |||||||||||||||| | || |    
T  2248043 ggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacaga-tatataacatgtttttctaaaaaaaat-a 2247946  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
     ||||||||||||||||||||  | ||||||| | |||||| |||||  |||||  |||||||| ||| |||| | ||||||||||| ||||    
T  2247945 tgtgtgattgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaa 2247854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 227
Target Start/End: Original strand, 41174397 - 41174544
Alignment:
Q  80 tttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactt 179  Q
    |||| ||||||||||| |||||||||  ||||||||||||||||| || || ||||||||| |||||||||| || |||||  |||||||||| ||||||    
T  41174397 tttcttttttaaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattatatgatcatttattatgttaatatgctaactt 41174496  T
Q  180 tttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||| ||| ||||||||||||||   || |||||||| |||| |||||    
T  41174497 tttaaaaaccatttcatagtgtccctaaattaaaaatgaaaactaaac 41174544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 2917151 - 2917061
Alignment:
Q  84 gtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgtt 174  Q
    ||||||||||| |||||||||| ||||| |||||||||||| ||| | |||||||||||||||||||| ||||||||| ||||||||||||    
T  2917151 gtttttaaattccggactatataacatgattttctaaaataaatttattgtgattgaagtattatatgatcgtttatcatgttaatatgtt 2917061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 227
Target Start/End: Original strand, 34110806 - 34111003
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatg--------tttttctaaaatatatt 128  Q
    |||||||||||||||||| |||||||| |||||   ||| | || || ||||||||||||  ||||||| ||||         ||||| | ||||| | |    
T  34110806 tttggattgagggtttaggaggggaagagaggggatgttaatttctcatttttaaattacaaactatataacataacatgtttttttttttaaataaagt 34110905  T
Q  129 aagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||| || || ||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||| || | ||||||||||||||||||||||    
T  34110906 aagtgtgcttaaaatattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcacagtatc-gtaatttaaaaataaaaagtaaac 34111003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 49735465 - 49735540
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  49735465 ctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggac 49735540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 22920981 - 22921115
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||| ||||||| |||| ||  ||| ||||  ||||| |||| ||||||||||||  |||| || ||||||||||||| |||| ||    
T  22920981 agggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaataaat 22921080  T
Q  128 taa-gtgtgattgaagtattatatggtcgtttatc 161  Q
     || ||||||||||||||||||||| |||||||||    
T  22921081 caaagtgtgattgaagtattatatgatcgtttatc 22921115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 22970818 - 22970684
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||| ||||||| |||| ||  ||| ||||  ||||| |||| ||||||||||||  |||| || ||||||||||||| |||| ||    
T  22970818 agggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaataaat 22970719  T
Q  128 taa-gtgtgattgaagtattatatggtcgtttatc 161  Q
     || ||||||||||||||||||||| |||||||||    
T  22970718 caaagtgtgattgaagtattatatgatcgtttatc 22970684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 21695134 - 21695010
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| ||||||||| |||||||  ||||||||| || ||||||||||||||||  |||||||||| |||| |||| |  | ||||| |  ||||     
T  21695134 taagggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatataatttattttt-tttaataa 21695036  T
Q  126 attaagtgtgattgaagtattatatg 151  Q
    ||||||||||||||||||||||||||    
T  21695035 attaagtgtgattgaagtattatatg 21695010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 54935313 - 54935241
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  54935313 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 54935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 54576324 - 54576399
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    |||| ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||    
T  54576324 ctaaaggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggac 54576399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 22186719 - 22186841
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    |||||||||||||||||||||||||| | |||||||||||| || ||| ||||||  ||||||||||||  || |  | | |||||||| ||||||| ||    
T  22186719 agggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaataaat 22186818  T
Q  128 taagtgtgattgaagtattatat 150  Q
     ||||||  ||||||||||||||    
T  22186819 aaagtgtttttgaagtattatat 22186841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 17182729 - 17182596
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||  ||||||| ||| ||||||  ||||||||  ||||||||||||| || |  | | || ||||| ||||||| ||    
T  17182729 agggtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaaaataaat 17182630  T
Q  128 taagtgtgattgaagtattatatggtcgtttatc 161  Q
    |||||||  ||||||||||||||| || ||||||    
T  17182629 taagtgtttttgaagtattatatgatcatttatc 17182596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 37711367 - 37711295
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  37711367 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggac 37711295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 45742138 - 45742046
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||||||| |||||||  |||||||||  ||| ||||||||| || ||||||||||| ||||||||||||||||  ||||| ||||||||    
T  45742138 tctaagggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttt 45742046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 54320678 - 54320606
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||  ||||  ||||||||||||||||    
T  54320678 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggac 54320606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 47846298 - 47846176
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatatt 128  Q
    ||||| |||||||||||||||||  ||| ||||||| ||||||||||||||||  ||||||||||| | || || | |  || ||||| ||||||| |||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaataaatt 47846199  T
Q  129 aagtgtgattgaagtattatatg 151  Q
    ||||||  |||||||||||||||    
T  47846198 aagtgtttttgaagtattatatg 47846176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 220
Target Start/End: Original strand, 55510177 - 55510361
Alignment:
Q  37 tttggattgagggtttagaaggggaaggga--gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 134  Q
    ||||||||||||| ||||   ||||||||   ||||||  ||||||||| ||||||| |||  ||| || | | |||||||| ||||||| |||||||||    
T  55510177 tttggattgaggggttagggagggaaggggaggggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaagtgt 55510276  T
Q  135 gattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaa 220  Q
    || |||||||||||||| || || ||| ||||  ||| || | ||||| ||||| |||| |||||||  | |||||||||||||||    
T  55510277 gactgaagtattatatgatcattcatcatgttgttat-ttcaatttttttaaaatattttatagtgttcgtaatttaaaaataaaa 55510361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 6938289 - 6938358
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatat 105  Q
    |||||||||| | ||||| ||||||||||||| |||| |||| ||||| |||||||||||||||||||||    
T  6938289 tttggattgatgatttaggaggggaagggaggagaggatttatttttcctttttaaattacggactatat 6938358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 31348348 - 31348409
Alignment:
Q  56 aggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  31348348 aggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttt 31348409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 21694906 - 21694962
Alignment:
Q  45 gagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  21694906 gagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggac 21694962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 34995108 - 34995172
Alignment:
Q  85 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattata 149  Q
    ||||||||||||| || || ||| |||||||||||||||| |||||||||  |||||||||||||    
T  34995108 tttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgtttttgaagtattata 34995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 27735987 - 27735917
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 100  Q
    ||||| ||||||| |||||||||| |||||||||||||  |||||| | ||||| ||||||||||||||||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggac 27735917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 41174591 - 41174517
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||| |||||| ||||| ||||||| ||| ||||    
T  41174591 taagggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggac 41174517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 6938493 - 6938420
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 99  Q
    ||||||||| ||||||| || ||||||  ||||||| |||||| |||||| ||||||| |||||||||||||||    
T  6938493 taagggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacgga 6938420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 7977743 - 7977602
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaata 124  Q
    ||||||||| |||||||||||||||||  ||||||| ||| ||||||||| | ||||  ||||||||||||| |  || | | ||| ||||| |||| ||    
T  7977743 taagggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacgaagaatgtaaaatgttttttttaaagta 7977644  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
     ||||| |||  ||||||||||||||| || |||||| ||||    
T  7977643 aattaattgtttttgaagtattatatgatcatttatcatgtt 7977602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 17938114 - 17938179
Alignment:
Q  36 atttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggac 100  Q
    |||||||| |||||||||| ||||||| ||||||| | ||||| ||||||||||||||||| ||||    
T  17938114 atttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggac 17938179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 49735736 - 49735687
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggttta 77  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  49735736 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttta 49735687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 5730830 - 5730902
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| |||| ||| || |||||||||||  |||| ||||||||||||||||    
T  5730830 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggac 5730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 37761708 - 37761636
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||| |||| |||||||||||| ||||||| || |||||| ||||||||||| ||||    
T  37761708 agggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaattatggac 37761636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 43961448 - 43961548
Alignment:
Q  66 agggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgt 165  Q
    |||||||| | ||||||  ||||||||||| | || || | | |||||||| ||||||| |||||||||  ||||||||||||||| || |||||| |||    
T  43961448 agggagggctcacttttattttttaaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgt 43961547  T
Q  166 t 166  Q
    |    
T  43961548 t 43961548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 53260716 - 53260771
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttc 83  Q
    ||||||||| ||||||| |||||||||| |||||||||||||| ||||| |||||||    
T  53260716 taagggtgtgtttggatggagggtttaggaggggaagggaggg-gggttcacttttc 53260771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 11089755 - 11089687
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggact 101  Q
    ||||||||| |||||||||||| |||||||||||||      || ||||||| |||| |||||||||||||||||    
T  11089755 taagggtgtgtttggattgaggatttagaaggggaa------gatggtttacatttcttttttaaattacggact 11089687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 35565566 - 35565613
Alignment:
Q  37 tttggattgagggtttagaaggggaaggga-gggagggtttacttttc 83  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  35565566 tttggattgagggtttagcaggggaagggaggggagggcttacttttc 35565613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 24565343 - 24565417
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 99  Q
    |||||||||| ||||||| || ||||||| | ||||||   ||| |||||||||||||| |||||||||||||||    
T  24565343 ctaagggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacgga 24565417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 36277781 - 36277819
Alignment:
Q  84 gtttttaaattacggactatatgacatgtttttctaaaa 122  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  36277781 gtttttaaattatggactatatggcatgtttttctaaaa 36277819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 51329793 - 51329917
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||||||| ||||||||||| |||||| ||||||||  || |||| ||| | ||||  ||||||||||||| || | |  | |||||||| |||||||    
T  51329793 ctaagggtgtgtttggattgagagtttaggaggggaagaaagaggagagttcaattttaatttttaaattacgaacaacacaaaatgtttttttaaaata 51329892  T
Q  125 tattaagtgtgattgaagtattatat 150  Q
     ||||||| |  ||||||||||||||    
T  51329893 aattaagt-tttttgaagtattatat 51329917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 23813148 - 23813240
Alignment:
Q  75 ttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtta 167  Q
    ||||||||| || |||||||||||||  ||| | ||||||||  ||| || || |||||| ||||||||| |||||| || |||||| |||||    
T  23813148 ttacttttcattgttaaattacggacactataaaatgtttttgaaaattaaataaagtgttattgaagtactatatgatcatttatcgtgtta 23813240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 29994017 - 29993893
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||  ||| |||| ||| ||||| |||| || |||||| |||||| ||||||  ||||||||||||| || || | | | |||||| |||||||     
T  29994017 taagggtgagtttagattaaggatttaggagggaaatggaggggagggttcacttttactttttaaattacgaacaatgtaaaaagtttttttaaaatag 29993918  T
Q  126 attaagtgtgattgaagtattatat 150  Q
    ||||||| |  ||||||||||||||    
T  29993917 attaagtatttttgaagtattatat 29993893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 35248922 - 35248858
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    ||||||| |||||||||| || || |||||||| ||||||||||||||  |||||||||| ||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggac 35248858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 37761463 - 37761586
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| ||||||||||| |||||| ||| ||| |||||| || ||| ||||||  ||||||||||||| || | || | || ||||| || ||||     
T  37761463 taagggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatattttt-tagaataa 37761561  T
Q  126 attaagtgtgattgaagtattatat 150  Q
    |||||||||  ||||||| ||||||    
T  37761562 attaagtgtttttgaagtgttatat 37761586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 44784206 - 44784166
Alignment:
Q  58 gggaagggagggagg-gtttacttttcgtttttaaattacg 97  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  44784206 gggaagggagggaagagtttacttttcgtttttaaattacg 44784166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 55080581 - 55080717
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| |||||||||||||||||| || ||||| |||| || |||| | ||||  ||| ||||||||| || || | | ||||||||  ||||||  |||    
T  55080581 ggtgtgtttggattgagggtttaggagaggaagagaggagatggttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagtta 55080680  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    |||||  |||||||||| |||| || |||||| ||||    
T  55080681 agtgtttttgaagtattttatgatcatttatcatgtt 55080717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 1027094 - 1026894
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| |||||||| ||||||||| | ||||||||||||| ||||| ||||||| ||||||||||||||||||||| | ||||||||||||||||     
T  1027094 taagggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataa 1026996  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||||||||    
T  1026995 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaa 1026896  T
Q  226 ac 227  Q
    ||    
T  1026895 ac 1026894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 31543316 - 31543117
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||| |||||||||||||||||| ||    
T  31543316 agggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaat 31543217  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||||||||||  ||||||||||||||| || | ||||||||||| ||||||||||    
T  31543216 taagtgtgattgaagtattatatgaccgtttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaac 31543117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 7503198 - 7503010
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||| ||| | |||||| ||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| ||    
T  7503198 agggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaat 7503099  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    ||||||||||| |||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  7503098 taagtgtgattaaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaat 7503010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 37 - 226
Target Start/End: Original strand, 1281151 - 1281341
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||| |||||||||||||||| |||| |||||||||||||| ||| || |||||||    
T  1281151 tttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtg 1281250  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
     ||||||||||||||  ||||||||  ||||||||||||||||||||| |||| ||||||||||||| | ||||||||||| |||| ||||    
T  1281251 gttgaagtattatattatcgtttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaa 1281341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 67 - 236
Target Start/End: Original strand, 16652988 - 16653157
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||||||||| |||||||| |||||    
T  16652988 gggagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatatgatcgtttattttgtt 16653087  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactctgtcctc 236  Q
    ||||||||||||||||  ||||||||||||| |||| | ||||||||||| |||| ||||| || |||||    
T  16653088 aatatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctc 16653157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 11575642 - 11575451
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    |||||||| ||||||||| | | |||||||||| |||||||||||||| ||||||||||||  | ||||| |||||||||||||||||| ||||||||||    
T  11575642 tttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagtgtg 11575543  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||   ||||||| ||| ||||||||||    
T  11575542 attaaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaac 11575451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 30479959 - 30479759
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| |||||||||||||||||  || |||| |||| |||||||||| ||||| |||||||| ||| ||||||||| ||||||||||||||||| || |    
T  30479959 ggtgtgtttggattgagggtttatgagaggaatggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataaatca 30479860  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactc 229  Q
    |||||||||||||||||||||  || ||||||   ||||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| |||||    
T  30479859 agtgtgattgaagtattatattatcatttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaagtgaactc 30479760  T
Q  230 t 230  Q
    |    
T  30479759 t 30479759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 221
Target Start/End: Complemental strand, 9718723 - 9718530
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| ||| |||||||||| |  ||||||||||| ||||||||||| | ||||||| |||| ||||||||||||  ||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaaattcat 9718624  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
    ||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||| ||| |||||||||||||| | ||||||||||| ||||    
T  9718623 taattgtgattgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaa 9718530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 197
Target Start/End: Original strand, 11033419 - 11033587
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 128  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||||  ||||||||||||||||| |||    
T  11033419 agggtgtgtttggattgagggtttagaagaggaagggaggg-gggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaatt 11033517  T
Q  129 aagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttt-ataaaacatttcata 197  Q
    | |||||||||||  |||||||| ||||||||| |||||||||||||| ||||| | |||||||||||||    
T  11033518 atgtgtgattgaataattatatgatcgtttatcatgttaatatgttaattttttaaaaaaacatttcata 11033587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 37 - 227
Target Start/End: Original strand, 7979148 - 7979339
Alignment:
Q  37 tttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| || |||||      
T  7979148 tttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgca 7979247  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||||||||||| |  |||||| |||||||| |||||  |||||  ||||||||||  ||||| | ||||||||||| ||||||||||    
T  7979248 attgaagtattatatgattatttatcatgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaagtaaac 7979339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 6315063 - 6315255
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 124  Q
    |||||||||| |||||||||||||||||| ||| ||| |||||||||  ||||| ||   ||||| ||||||||||||||| ||||||||||||||||||    
T  6315063 ctaagggtgtgtttggattgagggtttaggaggcgaa-ggagggaggaatttacatt---ttttttaattacggactatataacatgtttttctaaaata 6315158  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
     |||||||||||||||||||||||| | |||||||||  ||||||||||||| |||||  |||||||||||||||||| | | ||||||||| ||||    
T  6315159 aattaagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaatttttttaaaaacatttcatagtgtccgtattttaaaaatgaaaa 6315255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 42650542 - 42650408
Alignment:
Q  66 agggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgt 165  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| | ||||||| |||    
T  42650542 agggagagtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgt 42650443  T
Q  166 -ta--atatgttaactttttataaaacatttcata 197  Q
     ||  ||||||||||||||||||||||||||||||    
T  42650442 ataacatatgttaactttttataaaacatttcata 42650408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 2248452 - 2248647
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| ||||||||||| |||||| |||||||||||||| || ||| | ||| | ||||||||||||||  ||||| |||||||||||||||||| ||    
T  2248452 agggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacggtttatataacatgtttttctaaaataaat 2248551  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
     ||||||||||| | |||||||||  ||||||   |||||||| |||||||||| | |||| ||||||||||||| | ||||||||||||||||||    
T  2248552 caagtgtgattggaatattatatgaccgtttacgatgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagt 2248647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 67 - 221
Target Start/End: Original strand, 11785565 - 11785719
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||| ||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||||| || ||||||||||||||||| | ||||||| ||||    
T  11785565 gggagagtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgtttatcatgtt 11785664  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
    |||||| |||||||||| |||| |||||||| |||| | ||||||||||| ||||    
T  11785665 aatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaa 11785719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 37923320 - 37923122
Alignment:
Q  32 gtgtatttggattgagggtttagaag-gggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    |||| |||||||| ||||||||| || ||||||||| ||| ||||||| | ||  |||||||||||| |||||||| |||||||||||||||||| ||||    
T  37923320 gtgtgtttggattaagggtttaggagagggaagggatggaagggtttaatatttatttttaaattacagactatataacatgtttttctaaaataaatta 37923221  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaact 228  Q
    |||| |||| || ||||||||| || |||||| ||||||||| |||||| |||| |||||||||||||||||    ||||||||||| |||||||||||    
T  37923220 agtgcgattaaaatattatatgatcatttatcatgttaatattttaactctttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaact 37923122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 203
Target Start/End: Complemental strand, 40990427 - 40990251
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| ||||||||||||||| || || |||||||||| ||| ||||  ||||| ||||||||||||||||||||| |||||||| | ||||||| ||    
T  40990427 agggtgtgtttggattgagggtt-aggagaggaagggaggagagagtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaat 40990329  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttt--ataaaacatttcatagtgtct 203  Q
    ||||| |||||||||||||||||| ||| ||||| |||||||||||||||| |||  | |||||||||||||||||||    
T  40990328 taagtctgattgaagtattatatgatcgcttatcatgttaatatgttaactctttaaaaaaaacatttcatagtgtct 40990251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 29358587 - 29358385
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagg--gagggtttactttt-cgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    ||||| ||| ||||||||||| |||||  ||||||| ||| |  ||| |||||||||| | |||||||| |||||| ||||| |||| |||||||| |||    
T  29358587 taaggatgtgtttggattgagagtttacgaggggaaaggaagaggagtgtttactttttcatttttaaactacggattatataacatatttttctagaat 29358488  T
Q  124 atattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    | |||||||||||||||||||||||| | ||||||||  |||||||||||||| |||||| |||| |||| |||||||| | ||||||||||||||||||    
T  29358487 aaattaagtgtgattgaagtattataggatcgtttataatgttaatatgttaa-tttttaaaaaatattttatagtgtccgtaatttaaaaataaaaagt 29358389  T
Q  224 aaac 227  Q
    ||||    
T  29358388 aaac 29358385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 37032415 - 37032553
Alignment:
Q  64 ggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatctt 163  Q
    |||||||| ||||| ||||| |||||||||||| |||||||| |||||||||| ||||||| ||||||||||||| |||||||||||| | ||||||| |    
T  37032415 ggagggagagtttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattatatgatagtttatcat 37032514  T
Q  164 gttaatatgttaactttttataaaacatttcatagtgtc 202  Q
     ||||||||||||||||||| |||||| ||| |||||||    
T  37032515 cttaatatgttaactttttaaaaaacacttcctagtgtc 37032553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 215
Target Start/End: Original strand, 28083744 - 28083929
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| || ||||||||||||||| ||||||||||||| |||  |||  ||||| |||||||||||| ||| |||| |||||||| ||||||||| ||||    
T  28083744 ggtgtgttcggattgagggtttaggaggggaagggaggagagattttgtttttcttttttaaattacagacaatataacatgtttctctaaaataaatta 28083843  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaa 215  Q
    |||||||||| ||||||||||| | ||||||| |||| | ||||||||| |||| ||||||| ||||||| || | ||||||||||    
T  28083844 agtgtgattggagtattatatgattgtttatcatgttgacatgttaactctttaaaaaacatatcatagtatccgtaatttaaaaa 28083929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 69 - 202
Target Start/End: Complemental strand, 41103709 - 41103576
Alignment:
Q  69 gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaa 168  Q
    ||||||||||||||| ||||||||||||   |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||     
T  41103709 gagggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttat 41103610  T
Q  169 tatgttaactttttataaaacatttcatagtgtc 202  Q
    | | |||| |||||  ||||| ||||||||||||    
T  41103609 tgttttaatttttttaaaaacgtttcatagtgtc 41103576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 31738440 - 31738611
Alignment:
Q  46 agggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagta 144  Q
    ||||||||| |||||||| || ||||| ||||  ||||  |||||||||||| |||||||| |||||||| |||| |||| ||||||||| |||||||||    
T  31738440 agggtttaggaggggaagagaagggagagttttttttttttttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaagta 31738539  T
Q  145 ttatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaat 216  Q
    ||||||| || |||||| |||||||||||||||| || | |||| |||| |||||||| | |||||||||||    
T  31738540 ttatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagtgtccgtaatttaaaaat 31738611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 33922533 - 33922680
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 136  Q
    |||||||||||||||||| | |||||||||| |    |||||||||| |||||||||| |||||||||| |||| ||||| ||||||| ||| ||| |||    
T  33922533 tttggattgagggtttaggaagggaagggagag----tttacttttcttttttaaattccggactatataacatatttttttaaaataaatttagtatga 33922628  T
Q  137 ttgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaa 188  Q
    ||||||||| ||||| | ||||||| || |||||||||||||||||| ||||    
T  33922629 ttgaagtatgatatgattgtttatcatgataatatgttaactttttaaaaaa 33922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 4247764 - 4247563
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-----gagggtttacttttcgttttt-aaattacggactatatgacatgtttttctaaaa 122  Q
    ||||||| |||||||||| ||||||| |||||||||||||     ||||||||||||||| ||||| |||||| | | |||   | |||||||| |||||    
T  4247764 agggtgtgtttggattgaaggtttaggaggggaagggaggtagaggagggtttacttttctttttttaaattatgaattatt--atatgtttttttaaaa 4247667  T
Q  123 tatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaag 222  Q
    || ||||||| ||||| |||||||||||| ||||||||| || |||||||||||||| ||| |||| |||| | |||| | | |||||||||||||||||    
T  4247666 taaattaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaaatattttaaagtg-ccgtaatttaaaaataaaaag 4247568  T
Q  223 taaac 227  Q
    |||||    
T  4247567 taaac 4247563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 13404976 - 13405178
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    |||||||  ||||||||||||||||| ||||||||||| |||||   ||||||||| ||||||||| || |||||||| |||||||||||||||||| ||    
T  13404976 agggtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaataacagactatataacatgtttttctaaaataaat 13405075  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaa----ctttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    ||  | | |||||| ||||||||| ||||||||| |||||||| |||||    ||||| | |||| ||||  || |||| | ||||||||||| ||||||    
T  13405076 tatatataattgaattattatatgatcgtttatcatgttaatacgttaattcacttttaaaaaaatattttttaatgtccgtaatttaaaaatgaaaagt 13405175  T
Q  224 aaa 226  Q
    |||    
T  13405176 aaa 13405178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 12022391 - 12022249
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||| |||| | ||||||  |||||||||||||||| || | | |||||||| ||||||    
T  12022391 tctaagggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaat 12022292  T
Q  124 atattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    | |||||||||  ||||||||||||||| || |||||| ||||    
T  12022291 aaattaagtgtttttgaagtattatatgatcatttatcatgtt 12022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 3727086 - 3726908
Alignment:
Q  42 attgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattga 140  Q
    ||||||| ||||| |||| |||||||| ||| ||||||||||| |||||| ||||| |||||||| |||||||||||||||||| ||||||  |||||||    
T  3727086 attgaggatttaggagggaaagggaggtgagagtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattga 3726987  T
Q  141 agtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    | |||||||||  ||||||||        ||||||||| |||| |||||||| ||| ||||| | ||||||||||| |||| |||||    
T  3726986 aatattatatgaccgtttatc--------atgttaactatttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaac 3726908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 74 - 227
Target Start/End: Original strand, 30664407 - 30664560
Alignment:
Q  74 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgt 173  Q
    |||| ||||| |||||||||| | |||| ||| ||||||||||| |||||| |||||||||||||||||||||||||   |||||||| | |||||||||    
T  30664407 tttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatatgt 30664506  T
Q  174 taactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||||| |||| ||||  || |||| | ||||||||| | |||| |||||    
T  30664507 taactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaataaac 30664560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 10028106 - 10028241
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    ||||||| ||| ||||||| |||||||||| ||||||  ||||| |||  |||||||||| |||||||||||||||| |||| |||| ||||| ||||||    
T  10028106 tctaaggatgtgtttggatcgagggtttaggaggggataggaggtgagattttacttttcttttttaaattacggaccatataacatatttttttaaaat 10028205  T
Q  124 atattaagtgtgattgaagtattatatggtcgttta 159  Q
    | |||||||||| ||||||| ||||||| |||||||    
T  10028206 aaattaagtgtggttgaagtcttatatgatcgttta 10028241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 225
Target Start/End: Complemental strand, 24243287 - 24243096
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| ||||||| ||||||||| | |||||| |||||| |||| ||||||| | ||| |||||||| ||| |||||| || ||||| | ||||  |||||    
T  24243287 gtgtgtttggatcgagggttta-agggggaatggaggggagggcttactttccttttctaaattacagacaatatgagatctttttttcaaattaattaa 24243189  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    ||||||||||||||||||||| || |||||| ||||| ||| || | |||||| || |||||| |||||||| | ||||| ||||| ||||||||    
T  24243188 gtgtgattgaagtattatatgatcatttatcatgttattat-ttcaatttttaaaagacattttatagtgtc-gtaatttcaaaatgaaaagtaa 24243096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 36308881 - 36309042
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttc-taaaatatattaagtgtgattgaagtattatatggtcgtttatcttgt 165  Q
    ||||||||| | ||||| || ||||| ||  |||||||| ||||||||||  ||||||| | |||||||||||||||||||||||| | ||||||| |||    
T  36308881 gggagggttcatttttctttgttaaactagagactatataacatgttttttataaaataaactaagtgtgattgaagtattatatgattgtttatcatgt 36308980  T
Q  166 taatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||| |||||| | || | |||||| | |||  | |||||||| || ||||||||||    
T  36308981 taatatgtttacttttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaac 36309042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 230
Target Start/End: Complemental strand, 29691118 - 29690964
Alignment:
Q  79 ttttcgtttttaaattacggactatatgacatgtttttcta---aaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgtta 175  Q
    ||||| || |||||||||||||||| | |||||||||| |    ||||   ||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  29691118 ttttctttattaaattacggactatttaacatgtttttttttttaaatgacttaagtgtgattgaagtatcatatgatcgtttatcatgttaatatgtta 29691019  T
Q  176 actttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    |||||||  |||| ||||| |||| || | |  ||| |||| |||||||||||||    
T  29691018 acttttttaaaaatatttcctagtatcagtatgttataaatgaaaagtaaactct 29690964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 43732931 - 43732859
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  43732931 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 43732859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 35694915 - 35694828
Alignment:
Q  112 tttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagt 199  Q
    ||||| ||||||| || ||||||||||||||||||||||| |||||  | |  ||||||||||||||||||| |||| ||||||||||    
T  35694915 tttttttaaaataaatcaagtgtgattgaagtattatatgatcgttattatatttaatatgttaactttttaaaaaatatttcatagt 35694828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 31543070 - 31543160
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||| | ||||||| |||||||||  |||||||||||||| |||||||||||||| |||||||||||||||   ||||| ||||||||    
T  31543070 taagggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgttttt 31543160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 16024155 - 16024292
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatatt 128  Q
    ||||| |||||||||||||||||| | ||||||||| ||||| | | | |||| |||||||||||||| || |||| | ||| ||||| | ||||| |||    
T  16024155 ggtgtgtttggattgagggtttaggaagggaagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttttttaaataaatt 16024254  T
Q  129 aagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||  ||||||||||||||| || |||||| ||||    
T  16024255 aagtgtttttgaagtattatatgatcatttatcatgtt 16024292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 8815387 - 8815316
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 97  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| ||||||  |||||||||||||    
T  8815387 taagggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 215
Target Start/End: Original strand, 30365130 - 30365317
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| ||| ||| ||| ||||| ||| ||||||  ||||||||||||| || | || | || ||||| || |||| ||    
T  30365130 agggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaataaat 30365229  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaa 215  Q
    |||||||  ||||||| ||||||  || |||||| ||||  ||  | || ||| || ||| ||||||||| |||||| ||||||||||    
T  30365230 taagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtctgtaatttaaaaa 30365317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 34634278 - 34634336
Alignment:
Q  163 tgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
    ||||||||||||||||||||| || | ||||||||||||| | ||||||||||||||||    
T  34634278 tgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaa 34634336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 36309079 - 36309018
Alignment:
Q  37 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 97  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||    
T  36309079 tttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacg 36309018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 3726863 - 3726935
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| |||||||||| | ||| |||||| ||||| ||||||||||||||||    
T  3726863 agggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggac 3726935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 11575415 - 11575494
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||| |||| ||||| || ||||||||||||||||||||||||| || |||||||| |||   ||||| ||||||||    
T  11575415 tttggatggaggatttaggagaggaagggagggagggtttacttttcattcttaaattaaggatactatgaaatgttttt 11575494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 11785777 - 11785698
Alignment:
Q  22 aaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    |||||| ||||||| ||||||| |||||||||| |||| ||| || ||||||||||  ||||| ||||||||||||||||    
T  11785777 aaatcttagggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggac 11785698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 16024400 - 16024326
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||| |||| ||||||| |||| ||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  16024400 ctaagagtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacggac 16024326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 43732676 - 43732747
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattac 96  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||||  | ||||||  ||||||||||||    
T  43732676 ctaagggtgtgtttggattgagggtttaggaggggaagggagaggaggactcacttttattttttaaattac 43732747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 7394706 - 7394636
Alignment:
Q  28 aagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 97  Q
    |||| ||| |||||||||||||||||| ||||||||||| |||| |||| ||||||  |||||||||||||    
T  7394706 aaggatgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 12022142 - 12022212
Alignment:
Q  29 agggtgtatttggattgagggttt-agaaggggaagggaggg-agggtttacttttcgtttttaaattacg 97  Q
    ||||||| || |||| |||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||    
T  12022142 agggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattacg 12022212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 30365376 - 30365306
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattac 96  Q
    ||||||||| ||||||| |||| |||||||||| ||||||||| |||| || |||||| ||||||||||||    
T  30365376 taagggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattac 30365306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 41103502 - 41103568
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaa 92  Q
    ||||||||| ||||||| |||||||||| |||||||| ||||| |||||||  ||||||||||||||    
T  41103502 taagggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaa 41103568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 16653166 - 16653105
Alignment:
Q  56 aggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  16653166 aggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgttttt 16653105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 8815141 - 8815213
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| |||||||| |||| || |  ||||||||| ||||||||||||||||    
T  8815141 agggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggac 8815213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 30582030 - 30581916
Alignment:
Q  56 aggggaagggaggg-agggtttacttttcgtttttaaattacgg------actatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 148  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||      ||||||| |  |||||   ||||| | |||||||||||||||||||||||    
T  30582030 aggggaagggaggggagggcttacttttcttttttaaattacggacggacactatataatgtgttt---taaaacaaattaagtgtgattgaagtattat 30581934  T
Q  149 atggtcgtttatcttgtt 166  Q
    ||| || |||||| ||||    
T  30581933 atgatcatttatcatgtt 30581916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 31738667 - 31738595
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    ||||||| ||||||| |||||||||| ||||||||  |||| ||||||||  |||| ||||||||||||||||    
T  31738667 agggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggac 31738595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 220
Target Start/End: Original strand, 34196316 - 34196501
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttcta---aaatatattaagtg 133  Q
    ||||||||||||| | || |||||||||||||| ||| | |||||   ||||||||||||| || || |||  ||||||| |    ||||| || |||||    
T  34196316 tttggattgagggatcaggaggggaagggaggggggggtcactttaattttttaaattacgaacaatgtgaagtgtttttttttttaaataaat-aagtg 34196414  T
Q  134 tgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaa 220  Q
    |  ||||||||||||||| ||||||||||||||  ||  | || ||| || ||| ||||| ||| |||||| |||||||||| ||||    
T  34196415 tttttgaagtattatatgatcgtttatcttgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaaaagaaaa 34196501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 34633819 - 34633859
Alignment:
Q  110 tgtttttctaaaatatattaagtgtgattgaagtattatat 150  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  34633819 tgtttttctaaaataaatcaagtgtgattgaagtattatat 34633859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 38198245 - 38198170
Alignment:
Q  75 ttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatg 151  Q
    ||||||||| |||||||||||| |||  ||| |  ||||||| ||||||  ||||||||||||||||||||||||||    
T  38198245 ttacttttcatttttaaattacagacactataaagtgttttt-taaaatgaattaagtgtgattgaagtattatatg 38198170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 10028259 - 10028322
Alignment:
Q  165 ttaatatgttaactttttataaaac-atttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||| | ||||  ||||||||||||| | ||||||||| ||||||||||||    
T  10028259 ttaatatgttaacttttaaaaaaaatatttcatagtgtccgtaatttaaaagtaaaaagtaaac 10028322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 27487053 - 27487128
Alignment:
Q  91 aattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||||||  ||| | ||||||||||||||   ||||||||| |||||||||||||||| || |||||| ||||    
T  27487053 aattacggacgttataaaatgtttttctaaaaccaattaagtgttattgaagtattatatgatcatttatcatgtt 27487128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 1227928 - 1227886
Alignment:
Q  109 atgtttttctaaaatatattaagtgtgattgaagtattatatg 151  Q
    |||||| |||||||||| |||| ||||||||||||||||||||    
T  1227928 atgtttgtctaaaatatgttaaatgtgattgaagtattatatg 1227886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 34634389 - 34634315
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| ||||||| ||| |||||| ||||||||||| | ||||||| | ||||  ||||||||||||||||    
T  34634389 taagggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggac 34634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 8672038 - 8671998
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg 69  Q
    ||||||| |||||||||||| ||||||||||||||| ||||    
T  8672038 agggtgtgtttggattgaggatttagaaggggaaggtaggg 8671998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 20472933 - 20472813
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| |||||||||| |||||||||||| ||||| ||| |||  | ||||||  ||||||||||||| || || | |  |||||||  |||||| || ||    
T  20472933 gtgtgtttggattgaaggtttagaagggaaagggaaggaaggactcacttttattttttaaattacgaacaatgtaagttgttttttaaaaataaatcaa 20472834  T
Q  131 gtgtgattgaagtattatatg 151  Q
    ||||  |||||||||||||||    
T  20472833 gtgtttttgaagtattatatg 20472813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 24 - 227
Target Start/End: Complemental strand, 15224943 - 15224739
Alignment:
Q  24 atctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 122  Q
    |||||||||||| |||||||  ||||||||| |||||||||||||| | |||||||||||| |||||||||||||| |||||| ||||||||||||| ||    
T  15224943 atctaagggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaa 15224844  T
Q  123 tatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaag 222  Q
    || |||||||||||||||||||||||||| || |||||| ||||||||||||| ||||||| |||||||||||||||||| | ||||||||||| |||||    
T  15224843 taaattaagtgtgattgaagtattatatgatcatttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaag 15224744  T
Q  223 taaac 227  Q
    |||||    
T  15224743 taaac 15224739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 39732972 - 39732774
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||| |||||   ||||||||| | |||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  39732972 agggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaat 39732874  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||  | ||||||||||| ||||||||||    
T  39732873 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 39732774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 29 - 230
Target Start/End: Complemental strand, 36347785 - 36347583
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  36347785 agggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaat 36347686  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||||||||||||||||||  | ||||||| |||||||||||||||| |||| |||| || ||||||| || | ||| ||||||| |||||| |||    
T  36347685 taagtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtgaac 36347586  T
Q  228 tct 230  Q
    |||    
T  36347585 tct 36347583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 23748134 - 23748290
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||||||| ||||| |||||||| |||||||||||| ||||||||||| |||||| || ||||||||||||||||||||||  ||||||||| ||||    
T  23748134 gggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattatattatcgtttatcatgtt 23748233  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    ||||||||||||||||| || ||||||||||||||| | | ||||||||| ||||||    
T  23748234 aatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagt 23748290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 32 - 226
Target Start/End: Complemental strand, 36567093 - 36566896
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttactttt-cgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    |||| |||||||||||||||||| |||||||  |||| || | ||||||||| ||||||||||||| | | ||||| ||||||||||||| |||| ||||    
T  36567093 gtgtgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaattatgaattatataacatgtttttctataataaatta 36566994  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaaca-tttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    | |||||||||||||||||||| || |||||| |||||||||||||||||||||||||| | ||||||| |||| | ||||||||||| |||||||||    
T  36566993 attgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaaagtaaa 36566896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 19567062 - 19566865
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 126  Q
    |||| |||| |||||||||||||||||| || ||| |||||||    |||| |||   ||||||||||||||||||||| |||||||||||||||||| |    
T  19567062 taagagtgtgtttggattgagggtttaggagaggaggggaggg----tttaatttcattttttaaattacggactatataacatgtttttctaaaataaa 19566967  T
Q  127 ttaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttt-ataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    ||||||||||||||||||||||| |  |||||||| | |||||||| ||||||||| | |||||||||||||||||||| ||||||||| | | ||||||    
T  19566966 ttaagtgtgattgaagtattatacgaccgtttatcattttaatatgctaactttttaaaaaaacatttcatagtgtctgtaatttaaaactgagaagtaa 19566867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 36046443 - 36046246
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    ||||| |||||||||||||||||  ||||||||||||||  |||||||||||  |||||||||||||||| |||| ||||| |||| ||||||| |||      
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggaggggaggtttacttttgttttttaaattacggacgatataacatgcttttataaaataaatt-- 36046346  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    | |||||||||||||||| || || |||| | ||||||||||||||||||||| |||||||||  ||||||| | ||||||||||| |||| ||||||||    
T  36046345 gagtgattgaagtattatgtgatcatttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactct 36046246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 8427107 - 8426924
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 135  Q
    |||||||||||||||||| |||| ||||||||| || ||||||||||| |||||||| ||| ||| |||| |||||||||||||||||| |||||||| |    
T  8427107 tttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaagtgcg 8427008  T
Q  136 attgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||||||||||| || ||||||        |||||||||||||| ||||||||||||||||||   ||||||||||| ||||||||||    
T  8427007 attgaagtattatatgatcatttatc--------atgttaactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaac 8426924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 16565832 - 16565976
Alignment:
Q  85 tttttaaattacggactatatg--acatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttt 182  Q
    ||||||||||||| |||||||   |||||||||||||||||| |||||||||||||||||||||||||| ||||||||| | || |||||||||||||||    
T  16565832 tttttaaattacgaactatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaacttttt 16565931  T
Q  183 ataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    | ||||| ||||||||| || | ||||||||||||||||||||||    
T  16565932 aaaaaacgtttcatagtatccgtaatttaaaaataaaaagtaaac 16565976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 12541767 - 12541949
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttt-tctaaaata 124  Q
    ||||| |||| |||||||||||||||||| |||||| ||||| |    | |||||||| ||||||||||||||||||||| | || |||| |||||||||    
T  12541767 ctaagagtgtgtttggattgagggtttaggaggggaggggagag----tctacttttcttttttaaattacggactatataaaatattttttctaaaata 12541862  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaattta 211  Q
     |||||||| |||||||||| |||||| ||||||||| ||||||| ||||||||||||| ||||||||| ||||| |||| ||||||    
T  12541863 aattaagtgcgattgaagtactatatgatcgtttatcatgttaatgtgttaactttttaaaaaacattttatagtatctgtaattta 12541949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 42316909 - 42316807
Alignment:
Q  127 ttaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  42316909 ttaagtgtgattgaagtattatatgatcgtttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaa 42316810  T
Q  227 ctc 229  Q
    |||    
T  42316809 ctc 42316807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 215
Target Start/End: Original strand, 39821708 - 39821856
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||||||||||||| ||||||||||| ||| | ||| |||||||||||||||||| |||||||| |||| |||||||||| | || |||||| ||||    
T  39821708 gggagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtattataagatcatttatcatgtt 39821807  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaa 215  Q
    |||||||||||| |||| | |  ||||||||||||| | ||||||||||    
T  39821808 aatatgttaactctttaaatattatttcatagtgtccgtaatttaaaaa 39821856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 9426976 - 9427179
Alignment:
Q  20 taaaatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttct 118  Q
    |||| ||||| ||||| ||||||||||  |||||| ||||||||||||| ||||||||  ||||| ||||||||||||  ||||||| |||||||||||     
T  9426976 taaactctaatggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattaccaactatataacatgtttttca 9427075  T
Q  119 aaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttt-ttataaaacatttcatagtgtctgcaatttaaaaata 217  Q
    ||| || |||| | ||||||||||||||||||| | ||||||| || ||||||| |||||||   | ||||||||| |||||||| | |||||||||||     
T  9427076 aaactaaattatgcgtgattgaagtattatatgtttgtttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatg 9427175  T
Q  218 aaaa 221  Q
    ||||    
T  9427176 aaaa 9427179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 37 - 225
Target Start/End: Complemental strand, 31796000 - 31795816
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 136  Q
    |||||||||| ||||||| |||||||||||||||    ||| ||||| ||| ||||| ||||| || || |||||||||| ||||||| |||||||||||    
T  31796000 tttggattgaaggtttaggaggggaagggaggga----ttaattttcttttctaaatcacggagtaaataacatgtttttttaaaataaattaagtgtga 31795905  T
Q  137 ttgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    ||||||||||||||| ||||||||| ||||  ||| |||  |||| | ||||| |||||||||||| | ||||||||||  ||||||||    
T  31795904 ttgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaa 31795816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 35736175 - 35736298
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||||| |||||||| || |||||||||||||||||| ||    
T  35736175 agggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaataaat 35736274  T
Q  128 taagtgtgattgaagtattatatg 151  Q
     |||||||| ||||||||||||||    
T  35736275 gaagtgtgactgaagtattatatg 35736298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 41778767 - 41778906
Alignment:
Q  23 aatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 121  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    ||||||||| ||||  ||| | |||||||| ||||    
T  41778767 aatctaagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaa 41778866  T
Q  122 atatattaagtgtgattgaagtattatatggtcgtttatc 161  Q
    ||| |||||||||||||||||||||||||| || ||||||    
T  41778867 ataaattaagtgtgattgaagtattatatgatcatttatc 41778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 40022363 - 40022572
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttt--------taaattacggactatatgacatgtttttctaa 120  Q
    ||||||| |||||||||||||||||| |||| ||||| ||||||||||  ||||  ||||        ||||||| | ||||||| |||||||||| |||    
T  40022363 agggtgtgtttggattgagggtttaggagggtaagggggggagggtttgttttttttttttttttttttaaattatgaactatataacatgtttttgtaa 40022462  T
Q  121 aatatattaagtgtgattgaagtattatatggtcgtttatcttgt--taatatgttaacttttt-ataaaacatttcatagtgtctgcaatttaaaaata 217  Q
    |||| |||||||||||||||||||||||||| | ||||| | | |  ||||||||| ||||||| | |||||||||||||||||||| |||||||||||     
T  40022463 aataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttaaaaaaacatttcatagtgtctgtaatttaaaaatg 40022562  T
Q  218 aaaagtaaac 227  Q
    ||| ||||||    
T  40022563 aaatgtaaac 40022572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 28262642 - 28262514
Alignment:
Q  73 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatg 172  Q
    ||||||||||| |||||||||||  |||||||| |||||||||||||||||| ||||  |||||||||| ||||| ||| ||||||||| ||||| |||     
T  28262642 gtttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattata 28262543  T
Q  173 ttaactttttataaaacatttcatagtgt 201  Q
    ||||||||||| |||| ||||||||||||    
T  28262542 ttaactttttaaaaaatatttcatagtgt 28262514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 2241413 - 2241563
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| ||| ||||||||||| || |||||||||||||| || ||||||||||   || ||||||||||||||||| | | |||||||||||||| ||||    
T  2241413 ggtgtgtttagattgagggtt-aggaggggaagggaggggagagtttacttttttattataaattacggactatataatacgtttttctaaaataaatta 2241511  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttt 181  Q
    ||||| |||||||||||||||| | ||||||| |||||||||||||| ||||    
T  2241512 agtgtaattgaagtattatatgattgtttatcatgttaatatgttaaatttt 2241563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 34209562 - 34209666
Alignment:
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    |||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||| |||| |||||||||||| || ||||||||||| ||||||||    
T  34209562 attaagtgtgattgaagtgttatatgattgtttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaagtaa 34209661  T
Q  226 actct 230  Q
     ||||    
T  34209662 tctct 34209666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 37740085 - 37739946
Alignment:
Q  79 ttttcgtttttaaattacggactatatgacatgttttt-ctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaac 177  Q
    ||||| |||||||||| | || ||||| |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  37740085 ttttcttttttaaattccagattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaac 37739986  T
Q  178 tttttataaaacatttcatagtgtctgcaatttaaaaataaa 219  Q
    |||||  |||||  ||||||||||  | ||||| ||||||||    
T  37739985 tttttgaaaaac--ttcatagtgttcgtaattttaaaataaa 37739946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 17379897 - 17379986
Alignment:
Q  113 ttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtc 202  Q
    |||||||||||| |||||||||||||| ||||||||||| | ||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtgtc 17379986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 215
Target Start/End: Original strand, 9631566 - 9631747
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttcta---aaatatattaagtg 133  Q
    |||||||||| |||||||||| | ||||||     |||||||||||| |||||||| ||  |||||||| |||||||||| |    ||||| || |||||    
T  9631566 tttggattgaaggtttagaagagaaagggaaaagaggtttacttttcttttttaaactatcgactatataacatgtttttttttttaaataaatcaagtg 9631665  T
Q  134 tgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaa 215  Q
    ||| |||||||||||||  ||||||||| ||||||||||||||||||||| |  ||||||||| ||||| | ||||||||||    
T  9631666 tgaatgaagtattatattatcgtttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaa 9631747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 41841684 - 41841805
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| |||||||||||| ||||| |||| |||||| ||||||||||  ||||| ||||||||||||  ||||||| |||| |||| |||||||| ||||    
T  41841684 ggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattaccaactatataacatattttcctaaaataaatta 41841783  T
Q  130 agtgtgattgaagtattatatg 151  Q
    || ||||||| |||||||||||    
T  41841784 agggtgattggagtattatatg 41841805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 7681299 - 7681443
Alignment:
Q  79 ttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaact 178  Q
    ||||| ||||| ||||||||| ||||| | |  ||||| ||||||| |||||||||||||||||||||||||| |||||| |     ||  |||||||||    
T  7681299 ttttcattttttaattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattatatgatcgtttgt----atatcatgttaact 7681394  T
Q  179 ttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||| | |||| |||||||| | || ||||||||||||||||||||||||    
T  7681395 tttaaaaaaatatttcataatatccgcaatttaaaaataaaaagtaaac 7681443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 161
Target Start/End: Original strand, 886927 - 887049
Alignment:
Q  38 ttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 136  Q
    |||| |||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||  || |||| | ||| |||| ||||||| |||| ||||||    
T  886927 ttgggttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattac--acaatataaaatgcttttttaaaataaattatgtgtga 887024  T
Q  137 ttgaagtattatatggtcgtttatc 161  Q
    ||||||||||||||| || ||||||    
T  887025 ttgaagtattatatgatcatttatc 887049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 32503153 - 32503324
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgttttta---aattacggactatatgacatgtttttctaaa 121  Q
    |||||||||||||||||||||| |||||| || | | || |||| || ||||||||||| |||||    || ||| || ||||| |||| ||||||||||    
T  32503153 ctaagggtgtatttggattgagagtttaggagagaatggaaggggagtgtttacttttcttttttttttaaatactgattatataacatatttttctaaa 32503252  T
Q  122 atatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacattt 193  Q
    ||| ||||||| ||||| || ||||||||| |  |||||| | || |||| ||||||||||| |||||||||    
T  32503253 ataaattaagtatgattaaaatattatatgattatttatcatctttatatattaactttttacaaaacattt 32503324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 2381233 - 2381109
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||||||||||||| |||||||  |||| | ||||||| || ||| ||||||  ||||||||||||| || || | | |||||||| |||||||     
T  2381233 taagggtgtatttggattgtgggtttatgagggaatgggaggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataa 2381134  T
Q  126 attaagtgtgattgaagtattatat 150  Q
    |||||||||  ||||||||||||||    
T  2381133 attaagtgtttttgaagtattatat 2381109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 31061357 - 31061497
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| |||||||||| ||||||| ||||||| ||| ||||||| | ||||||  ||||||||||||| || || | | |||| ||| |||||||     
T  31061357 taagggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataa 31061456  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    |||||||||  ||||| ||||||||| || |||||| ||||    
T  31061457 attaagtgtttttgaaatattatatgatcatttatcatgtt 31061497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 9592032 - 9591973
Alignment:
Q  75 ttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 134  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  9592032 ttactttttttttttaaattacgcactatataacatgtttttctaaaatatattaagtgt 9591973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 9631806 - 9631732
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| ||||||| |||||||||| |||| |||||||  ||||||| ||||||||||||||||||||||||    
T  9631806 taagggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggac 9631732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 12751899 - 12751989
Alignment:
Q  112 tttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtc 202  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||  | ||| ||| |||| |||| | |||| |||||||||||||    
T  12751899 tttttctaaaataatttaagtgtgattgaagtattatatgatcgtttattatattattatattaatttttaaaaaaatatttcatagtgtc 12751989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 23748341 - 23748267
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  23748341 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggac 23748267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 29525940 - 29525823
Alignment:
Q  65 gagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggt--cgtttatct 162  Q
    |||||||  |||| ||||| ||||||||| ||||| ||||| | |||||||| ||||||| ||||| |||||||||||||||||||  |    ||||||     
T  29525940 gagggagattttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattatataatactttttatca 29525841  T
Q  163 tgttaatatgttaacttt 180  Q
    ||||||||||||||||||    
T  29525840 tgttaatatgttaacttt 29525823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 45257294 - 45257440
Alignment:
Q  16 aaaataaaatctaagggtgtatttggattgagggtttagaagggg-aagggagggagggtttacttttcgtttttaaattacggactatatgacatgttt 114  Q
    |||||||||  ||||||||| ||||||||||| |||||| ||||| |||| |||||||  | ||||||  ||| ||||||||| || || | | ||||||    
T  45257294 aaaataaaaattaagggtgtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaacaatgtaaaatgttt 45257393  T
Q  115 ttctaaaatatattaagtgtgattgaagtattatatggtcgtttatc 161  Q
    |  ||||||| |||||||||  ||||||||||||||| || ||||||    
T  45257394 tcttaaaataaattaagtgtttttgaagtattatatgatcatttatc 45257440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 3094607 - 3094474
Alignment:
Q  19 ataaaatctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttc 117  Q
    ||||||||||| ||||| |||||||||||||||||| | || ||||||||| | |  | ||||||  ||||||||||||  ||||| | | |||||||||    
T  3094607 ataaaatctaacggtgtgtttggattgagggtttaggaaggaaagggaggggaagactcacttttattttttaaattacaaactatgtaaaatgtttttc 3094508  T
Q  118 taaaatatattaagtgtgattgaagtattatatg 151  Q
    ||||||| |||  ||||  |||||||||||||||    
T  3094507 taaaataaatttcgtgtttttgaagtattatatg 3094474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 215
Target Start/End: Complemental strand, 39354380 - 39354231
Alignment:
Q  66 agggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgt 165  Q
    |||||| ||||||||||  ||||||||||||    ||||| |||||||| ||||||||| | | |||||||||||||||||| ||| ||| ||||  |||    
T  39354380 agggagagtttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtattacatgatcgattattatgt 39354281  T
Q  166 taatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaa 215  Q
    || ||| |||| |||||  |||| |||||||| |||  | ||||||||||    
T  39354280 tattattttaatttttttaaaaatatttcataatgtgcgtaatttaaaaa 39354231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 22356248 - 22356176
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| |||||||||||| ||||| ||||||||||| ||||||||| | ||||| ||||||||||||||||    
T  22356248 agggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggac 22356176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 35736435 - 35736359
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||||| ||||||| |||||||||| ||| ||||||| ||||||| | |||||||||||||||||| |||||    
T  35736435 tctaagggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggac 35736359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 42296547 - 42296415
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| ||||||||||||| |||| ||||||||||||| ||||||| ||||||  ||||||||||||| || || | | || ||||| ||||||  ||    
T  42296547 agggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatgaat 42296448  T
Q  128 taagtgtgattgaagtattatatggtcgtttat 160  Q
    |||||||  || || ||||||||| || |||||    
T  42296447 taagtgtttttaaattattatatgatcatttat 42296415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 6721820 - 6721717
Alignment:
Q  74 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgt 173  Q
    |||| ||||| ||||||||  ||||| |||||  ||||||||||||||||| || ||||||||||||| ||||||||  || |||||| |||||| || |    
T  6721820 tttagttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattgaaatattatattatcatttatcatgttaagatat 6721721  T
Q  174 taac 177  Q
    ||||    
T  6721720 taac 6721717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 8426881 - 8426967
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    |||||||||| || ||| |||||| ||||||||||| ||||||||||||||||  ||||||||||| ||||  ||||| ||||||||    
T  8426881 ggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttt 8426967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 17380087 - 17380013
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| |||||||||||||||||| |||||||| || |||| |||||  ||||| ||||||||||||||||    
T  17380087 taagggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggac 17380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 27926668 - 27926753
Alignment:
Q  143 tattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaact 228  Q
    ||||||||| ||||||||| |||||||||||||||||||||   || |||| ||||| || | ||||||||||| |||| ||||||    
T  27926668 tattatatgatcgtttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaaataaact 27926753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 31795766 - 31795863
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 122  Q
    ||||| |||| ||||||| |||||||||  ||| |||||||||| |||  ||||||||||||||||||||||||||  ||||| | |||||| |||||    
T  31795766 ctaagagtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaa 31795863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 34187573 - 34187697
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| ||||||||||| |||||| || |||||| | |||| |||| ||||||  ||||||||||||| || |  | | |||||||  |||||||     
T  34187573 taagggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataa 34187672  T
Q  126 attaagtgtgattgaagtattatat 150  Q
    |||||||||  ||||||||||||||    
T  34187673 attaagtgtttttgaagtattatat 34187697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 17379839 - 17379886
Alignment:
Q  22 aaatctaagggtgtatttggattgagggtttagaaggggaagggaggg 69  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  17379839 aaatcttagggtgtgtttggattgagggtttaggaggggaagggaggg 17379886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 45257551 - 45257480
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 99  Q
    ||||||| ||||||| |||| ||||| | ||||||||||| || |||||||||||| |||||||||||||||    
T  45257551 agggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacgga 45257480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 1583222 - 1583272
Alignment:
Q  173 ttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    ||||||||||| |||||||||||||||||| | ||||||||||| ||||||    
T  1583222 ttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 1583272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 161
Target Start/End: Original strand, 33265611 - 33265739
Alignment:
Q  33 tgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaag 131  Q
    |||||||||||||||||||||| ||||||||||||| || |  | | ||||  ||||||||||||| || || | | |  ||||| ||||||| ||||||    
T  33265611 tgtatttggattgagggtttaggaggggaagggaggcgatgactcatttttattttttaaattacgaacaatgtaaaacattttt-taaaataaattaag 33265709  T
Q  132 tgtgattgaagtattatatggtcgtttatc 161  Q
    |||  ||||||||||||||| || ||||||    
T  33265710 tgtttttgaagtattatatgatcatttatc 33265739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 40022608 - 40022523
Alignment:
Q  38 ttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 122  Q
    |||||| |||||||||  ||| |||||||||| ||||||||| |||| |||||||||||| |||  ||||| |||||||| |||||    
T  40022608 ttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaa 40022523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 36046205 - 36046276
Alignment:
Q  30 gggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    |||||| ||||||| |||||||||| |||||||  ||||| || ||||| ||||| ||||||||||||||||    
T  36046205 gggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggac 36046276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 18811413 - 18811467
Alignment:
Q  113 ttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtta 167  Q
    |||| ||||||| |||||||||||||||| ||||||||| | ||||||| |||||    
T  18811413 ttttttaaaataaattaagtgtgattgaaatattatatgattgtttatcatgtta 18811467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 36347539 - 36347629
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||||| |||||||  ||||||||| |||||||||| || ||| ||| ||||||| |||||| ||||||||   |||||||| |||||    
T  36347539 taagggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttt 36347629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 1583282 - 1583233
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||||||| ||||||| ||||||||||||||||  ||||| ||||||||    
T  1583282 gggagggttcacttttcatttttaaattacggacactatgaaatgttttt 1583233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 15224733 - 15224782
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    ||||| ||||||||||| ||||||||||||||||  ||||| ||||||||    
T  15224733 gggagtgtttacttttcatttttaaattacggacactatgaaatgttttt 15224782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 22356022 - 22356087
Alignment:
Q  85 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatat 150  Q
    ||||||||||||| || || | | |||||||| ||||||| |||||||||  ||||||||||||||    
T  22356022 tttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatat 22356087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 31061596 - 31061543
Alignment:
Q  37 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgttttt 89  Q
    |||||||||||||||||| ||||||| ||| |||||| |||||||||| |||||    
T  31061596 tttggattgagggtttaggaggggaatggaggggaggatttacttttctttttt 31061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 887335 - 887283
Alignment:
Q  48 ggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 99  Q
    ||||||| |||||||||||||| || | ||||||||| |||||||||||||||    
T  887335 ggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacgga 887283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 7681488 - 7681417
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacgga 99  Q
    ||||||| | ||||||| |||||||||   ||||||||| ||||||||||||||||  |||||||||| ||||    
T  7681488 taagggtttgtttggatcgagggtttaagcggggaaggg-gggagggtttactttttatttttaaattgcgga 7681417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 16713494 - 16713614
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| ||| |||||||||||||  ||||||||||| ||||  ||| | ||||  ||||||||||||| || |||| | || ||||| ||||| | ||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaagaaatta 16713593  T
Q  130 agtgtgattgaagtattatat 150  Q
     ||||  ||||||||||||||    
T  16713594 tgtgtttttgaagtattatat 16713614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 31928285 - 31928225
Alignment:
Q  37 tttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattac 96  Q
    ||||||| |||||||||| |||||||||| |||||||| | ||||||  ||||||||||||    
T  31928285 tttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaattac 31928225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 39732768 - 39732816
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttt 115  Q
    ||||||||||||||||| ||||||||||||| ||  ||||| |||||||    
T  39732768 gggagggtttacttttcatttttaaattacgaacattatgaaatgtttt 39732816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 225
Target Start/End: Complemental strand, 4097754 - 4097559
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgttttt-ctaaaatatatta 129  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||| ||||||| |||||||||||||||| |||| |||| ||||| | |||||| ||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaataaatta 4097655  T
Q  130 agtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| |||||| | ||||||||||| ||||||||    
T  4097654 agtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaagtaa 4097559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 33235951 - 33236152
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    |||||||||||||||||||| |||||  || |||||||| |||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  33235951 agggtgtatttggattgaggatttaggtggagaagggagtggaaagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaat 33236050  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||  ||||||||| |||||||| | ||||||| ||||||||||||||||||||| |||| ||||||||||||| | ||||||||||| |||||||| |    
T  33236051 taagactgattgaagaattatatgattgtttatcatgttaatatgttaacttttta-aaaaaatttcatagtgtccgtaatttaaaaatgaaaagtaatc 33236149  T
Q  228 tct 230  Q
    |||    
T  33236150 tct 33236152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 32 - 227
Target Start/End: Complemental strand, 21607085 - 21606889
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| |||||||||||||||||| |||||||| |||  ||  |||||| |||||||||||||||||  ||||||| | |||||||||||||||| || ||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattacaaactatattatatgtttttctaaaataaataaa 21606986  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||||    
T  21606985 gtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaagtaaac 21606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 19278278 - 19278071
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| ||||||||||| |||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||| |    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaattta 19278180  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgtta----atatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    || |||||||||||| ||||| ||||||||| |||||    |||||| ||||||||| |||| |||| |||||||| | ||||||||||| |||||||||    
T  19278179 gtctgattgaagtatcatatgatcgtttatcatgttaatatatatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaagtaaa 19278080  T
Q  227 ctctgtcct 235  Q
    |||| ||||    
T  19278079 ctctctcct 19278071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 40 - 223
Target Start/End: Original strand, 31849121 - 31849305
Alignment:
Q  40 ggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgatt 138  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||| |||||||| ||| |||||||| |||| ||||||||||||| || ||||||||||    
T  31849121 ggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaataaatcaagtgtgatt 31849220  T
Q  139 gaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagt 223  Q
    ||||||||||||  | |||||||  ||||||||||||| |||||| || |||||| |||||||| | ||||||||||| ||||||    
T  31849221 gaagtattatattattgtttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagt 31849305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 30487546 - 30487375
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| ||| |||||||||||||| |||||||||||| |||||||||| ||||  |||||||| |||||||||||| |||||||||| ||||||| || ||    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaa 30487447  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtc 202  Q
    ||||||||||||||||||||  | ||||||| |||||||||||| |||||||| || |||||||||| ||||    
T  30487446 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtc 30487375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 1300658 - 1300819
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa-atatattaagtgtgattgaagtattatatggtcgtttatcttgt 165  Q
    |||||||||||||||  |||||||||||||||| ||||| |||| ||||| | || ||| |||||||||||||||||||||||||| | |||||||  ||    
T  1300658 gggagggtttactttatgtttttaaattacggattatataacatatttttttcaagataaattaagtgtgattgaagtattatatgattgtttatcaggt 1300757  T
Q  166 taatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||||||||||||||| |||||||| |||| | ||||||||||| ||||||||||    
T  1300758 taatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaagtaaac 1300819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 226
Target Start/End: Complemental strand, 9719273 - 9719077
Alignment:
Q  30 gggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 128  Q
    |||||| |||||||||||||||||  |||||||| |||||  ||||||| ||||| |||||||||| |||||||||| ||||| |||| |||| || |||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatgctttt-taaattaaatt 9719175  T
Q  129 aagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
     |||||||||||||||||||||| | |||||||   ||||||||||||||||||| |||||||| ||||||||| | ||||||||||| |||| ||||    
T  9719174 tagtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaa 9719077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 1390317 - 1390517
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggactatatgacatgttt-ttctaaaata 124  Q
    ||||||||| ||||||| |||||||||  |||||||| | || |||  |||| ||||| |||| |||||||||||||| | |||||||| ||||||||||    
T  1390317 taagggtgtgtttggatggagggtttatgaggggaagagcagagagaatttaattttctttttaaaattacggactatgtaacatgtttattctaaaata 1390416  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagta 224  Q
     ||||||| |||||||| |||||| || || |||||| ||||||||||||||||||||| |||| ||||||||||||| | ||||||||||| |||||||    
T  1390417 aattaagtttgattgaaatattat-tgatcatttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagta 1390515  T
Q  225 aa 226  Q
    ||    
T  1390516 aa 1390517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 230
Target Start/End: Complemental strand, 5585486 - 5585343
Alignment:
Q  88 ttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaa 187  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||| |||  ||||||||  ||||||||||||| ||||||| |||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaa 5585387  T
Q  188 acatttcatagtgtctgcaattt-aaaaataaaaagtaaactct 230  Q
    ||||||||||||||  | ||||| ||||| ||||||||||||||    
T  5585386 acatttcatagtgttcgtaatttaaaaaagaaaaagtaaactct 5585343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 201
Target Start/End: Original strand, 14515469 - 14515644
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| |||||||  ||||| |||||||||||||||||| || |  ||||| ||||||||    
T  14515469 tctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactagataa--tgtttctctaaaat 14515566  T
Q  124 atattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgt 201  Q
    | ||||||||||| |||||||||||||  || |||||| |||| ||||||||||| || | |||| |||| |||||||    
T  14515567 aaattaagtgtgaatgaagtattatattatcatttatcatgttcatatgttaactcttcaaaaaatattttatagtgt 14515644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 227
Target Start/End: Original strand, 10818227 - 10818415
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |  ||||| ||||| |||||||||||||||| |||| |||||||||              
T  10818227 taagggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatgtttt---------- 10818316  T
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
       || |||||||||||||||||||| || |||||| ||||||||||||||  ||||| |||||||||||||||||| | ||||||||||| ||||||||    
T  10818317 ---aaatgtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaa 10818413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 16738241 - 16738042
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 126  Q
    ||||||| | |||||||||||||||||| | |||||||  ||||| ||||||||||| |||||||||||| || ||||| | |||||||||||||||| |    
T  16738241 taagggtttgtttggattgagggtttaggatgggaaggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaa 16738142  T
Q  127 ttaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
     ||||||| ||| |||||||||||| |||| |||| ||||| ||| |||| || | | ||||||||||||||| ||   ||||||||||  |||||||||    
T  16738141 gtaagtgttatttaagtattatatgatcgtatatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaa 16738042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 230
Target Start/End: Original strand, 34176397 - 34176537
Alignment:
Q  90 aaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaac 189  Q
    |||||||||| ||||| |||||||||||||||||| || ||||||||||| ||||||||| | ||||||||  ||||||||||||||||||  | ||||     
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaat 34176496  T
Q  190 atttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    ||||||||||||| | ||||||||||| |||| ||||||||    
T  34176497 atttcatagtgtccgtaatttaaaaatgaaaactaaactct 34176537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 226
Target Start/End: Complemental strand, 2892844 - 2892650
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| |||| || |||||||| ||||| |||||||||| ||  |||||||||| |||||||| |||||||||||| ||| |||||||||||||| ||| |    
T  2892844 gtgtgtttgaatggagggtttggaaggcgaagggaggggagaatttacttttcttttttaaactacggactatataacacgtttttctaaaataaattta 2892745  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    ||||||||||| ||||||||| | ||||||| ||||| ||| |||| |||||| |||| || |||||||||  | ||||||| || ||||||||||    
T  2892744 gtgtgattgaaatattatatgattgtttatcatgttattattttaa-tttttaaaaaatatctcatagtgtgcgtaatttaacaacaaaaagtaaa 2892650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 9721381 - 9721183
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||| ||||||||||||  | || ||| |||||  ||||||| ||||| |||||||||| ||||| |||| |||||||||| |||| || |     
T  9721381 agggtgtgtttgaattgagggtttatgaaggtaagagaggggtgggtttaattttcttttttaaattccggaccatataacatgttttt-taaattaaag 9721283  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    | |||||||||||||||||||||| | |||||||   ||||||||||||||||||| |||||||| ||||||||| | ||||||||||| |||| |||||    
T  9721282 ttagtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaac 9721183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 13583777 - 13583895
Alignment:
Q  86 ttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttata 185  Q
    ||||||||||| || ||||| |||||||||||||||||| |||||||||||||||| ||||||||| || |||||  |||||| ||||||| |||||| |    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaa 13583876  T
Q  186 aaacatttcatagtgtctg 204  Q
    |||||||||||||||||||    
T  13583877 aaacatttcatagtgtctg 13583895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 226
Target Start/End: Original strand, 33041473 - 33041660
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| ||||||||| |||||||| || |||| |||||| ||  |||| ||||| |||||||||||  |||||||| |  ||||||| ||||||| |||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaattatagactatataatgtgtttttttaaaataaattaa 33041572  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    ||||||||||||| ||||        ||||| ||||||||||||||||||||| ||||||||||||||| || | |||||||||||||||| ||||    
T  33041573 gtgtgattgaagtgttat--------ttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaa 33041660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 2893632 - 2893752
Alignment:
Q  31 ggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 129  Q
    ||||| |||||||||||||||| | | |||||  ||| |||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||    
T  2893632 ggtgtgtttggattgagggtttgggaagggaaatgagcggagagtttacttttcgtttttaaactacagactatataacatgtttttctaaaataaatta 2893731  T
Q  130 agtgtgattgaagtattatat 150  Q
    ||||||||||| |||||||||    
T  2893732 agtgtgattgatgtattatat 2893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 2900017 - 2900109
Alignment:
Q  135 gattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||| |||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  2900017 gattgatgtattatatgattgtttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaac 2900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 12811224 - 12811108
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| | |||||| ||||| |||| ||||||||| | |||||||||  |||||||| | |||||||||||||||| ||    
T  12811224 agggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataaat 12811125  T
Q  128 taagtgtgattgaagta 144  Q
    |||||||||||||||||    
T  12811124 taagtgtgattgaagta 12811108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 235
Target Start/End: Complemental strand, 2893050 - 2892880
Alignment:
Q  68 ggagggtttacttttcgtttttaaattacggactatatgacatgt-ttttctaaaatatattaa--gtgtgattgaagtattatatggtcgtttatcttg 164  Q
    |||||||||||||||| ||||||||||||| ||||||| | || | |||| | ||||| ||| |  ||||||||||||||||||||| ||||||||| ||    
T  2893050 ggagggtttacttttcttttttaaattacgaactatataaaatatatttttttaaataaatttatagtgtgattgaagtattatatgatcgtttatcatg 2892951  T
Q  165 ttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactctgtcct 235  Q
    ||| ||| |||  || ||| |||| ||||||||||||  | |||||||||| ||||||||| |||||||||    
T  2892950 ttattattttactttcttacaaaatatttcatagtgtgcgtaatttaaaaacaaaaagtaagctctgtcct 2892880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 10348986 - 10348854
Alignment:
Q  85 tttttaaattacggactatatgacatgtttttct-aaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttta 183  Q
    ||||||||||||||||||||| |||||||||| | ||||||  | ||||| ||||||||||||||||  ||||||||| | |||||||||||||||||||    
T  10348986 tttttaaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaacttttta 10348887  T
Q  184 taaaacatttcatagtgtctgcaatttaaaaat 216  Q
     || | |||||||| | || | |||||||||||    
T  10348886 aaagatatttcatattatccgtaatttaaaaat 10348854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 226
Target Start/End: Original strand, 1395692 - 1395834
Alignment:
Q  85 tttttaaattacggactatatgacatgtttttc-taaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttta 183  Q
    ||||| ||||||||||||| | ||||||||||  ||||||| |||||||||||||||| || || ||| || |||||| || ||||||||||| ||||||    
T  1395692 ttttttaattacggactatgtaacatgttttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaatttttta 1395791  T
Q  184 taaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
     ||||||||  | |||||  | ||||||||||| |||||||||    
T  1395792 aaaaacattctacagtgttagtaatttaaaaatgaaaagtaaa 1395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 10818459 - 10818364
Alignment:
Q  30 gggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    |||||| ||||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||  ||||| |||||||| ||||||||    
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttt-taaaatat 10818364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 6034275 - 6034201
Alignment:
Q  69 gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagt 143  Q
    |||| |||||||||| |||||||||| | |||| ||| |||||||||||||||||| ||||||||||||||||||    
T  6034275 gaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattgaagt 6034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 9721136 - 9721210
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||| |||||||||| ||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  9721136 taagggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 9721210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 25741476 - 25741562
Alignment:
Q  97 ggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttta 183  Q
    ||||||||| |||||||||| ||||||| |||||| |||| |||||| ||||||| ||||||||| | ||| |||||||||||||||    
T  25741476 ggactatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattattatgttaacttttta 25741562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 176
Target Start/End: Complemental strand, 30850153 - 30850008
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| |||||||||||||||||| |||| ||| || ||||| ||||||||||   |||||||||| | | ||||| | |||||||| ||||| | ||| |    
T  30850153 gtgtgtttggattgagggtttaggagggaaagagaagggagagtttacttttttattttaaattatgaattatataatatgtttttttaaaacaaattta 30850054  T
Q  131 gtgtgattgaagtattatatggtcgtttatcttgttaatatgttaa 176  Q
    || | |||||||||||||||| ||||||||| ||||| ||| ||||    
T  30850053 gtataattgaagtattatatgatcgtttatcatgttattattttaa 30850008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 9719029 - 9719103
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    |||| |||| |||||||||||||||||| ||||||||||| |||||| |||| ||||| ||||||||||||||||    
T  9719029 taagcgtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggac 9719103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 1300866 - 1300785
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatga 107  Q
    ||||||||| ||||||| |||||||| ||||  ||| |||||| |||||||||||||| |||||||||||||||| ||||||    
T  1300866 taagggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatga 1300785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 23090993 - 23091118
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 125  Q
    ||||||||| |||||||||| ||||||| ||||||||||| ||||||| | ||||||   |||||||||||| || || | | |||| ||| |||| ||     
T  23090993 taagggtgtgtttggattgaaggtttaggaggggaagggaggggagggctcacttttatcttttaaattacgaacaatctaaaatgtatttttaaactaa 23091092  T
Q  126 attaagtgtgattgaagtattatatg 151  Q
    |||||||||  |||||||||||||||    
T  23091093 attaagtgtttttgaagtattatatg 23091118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 29490621 - 29490475
Alignment:
Q  48 ggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat--attaagtgtgattgaagta 144  Q
    ||||||| ||||||| |||| ||||  |||| ||||  ||||||||||||| || || | |||||||||| ||||| ||  |||||| |||||| |||||    
T  29490621 ggtttaggaggggaaaggagaggagaatttatttttattttttaaattacg-acaatctaacatgtttttttaaaaaatcaattaagcgtgatttaagta 29490523  T
Q  145 ttatatggtcgtttatcttgttaatatgttaactttttataaaacatt 192  Q
    ||||||| |  ||||||||||||||| |||||||||||| || |||||    
T  29490522 ttatatgatattttatcttgttaatacgttaactttttaaaatacatt 29490475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 30487304 - 30487373
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 95  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||||||| ||||||| || ||||||||    
T  30487304 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta 30487373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 15353364 - 15353495
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||| | | ||||||  ||||||||||||| || || | | |||||||| | ||||| |     
T  15353364 agggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaata-aa 15353462  T
Q  128 taagtgtgattgaagtattatatggtcgtttat 160  Q
    |||||||  |||| |||||||||| || |||||    
T  15353463 taagtgtttttgatgtattatatgatcatttat 15353495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 14548850 - 14548718
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 123  Q
    ||||||||||| |||||||||||||||||  | || ||| |||  ||| ||||||||||    |||||||||||||| |||| | ||||| || ||||||    
T  14548850 tctaagggtgtgtttggattgagggtttacgatggaaagagagaagagagtttactttt----tttaaattacggacaatataaaatgttattttaaaat 14548755  T
Q  124 atattaagtgtgattgaagtattatatggtcgtttat 160  Q
    | ||||| ||||||||||  |||||||| || |||||    
T  14548754 aaattaactgtgattgaaccattatatgatcatttat 14548718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 15323225 - 15323348
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||| | | ||||||  ||||||||||||| || || | | || | ||| ||||||| ||    
T  15323225 agggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatatatttttaaaataaat 15323324  T
Q  128 taagtgtgattgaagtattatatg 151  Q
    |||||||   ||| ||||||||||    
T  15323325 taagtgtttctgatgtattatatg 15323348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 665987 - 665915
Alignment:
Q  126 attaagtgtgattgaagtattatatggtcgtttatcttgttaatatgtt-aactttttataaaacatttcata 197  Q
    |||||||||| ||||||||||||||  || |||||| |||||||||||| || |||||| || ||||||||||    
T  665987 attaagtgtggttgaagtattatatcatcatttatcatgttaatatgttaaaatttttaaaagacatttcata 665915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 4097231 - 4097307
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||  ||| ||||||||||  ||||| ||| ||||||    
T  4097231 tctaagggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggac 4097307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 9298735 - 9298636
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg------agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 122  Q
    ||||||| |||||||  |||| |||| ||||||||||||||      ||||||||||||||  |||||||||||||||  ||||| |||||||| |||||    
T  9298735 agggtgtgtttggatgaaggggttaggaggggaagggaggggaggggagggtttacttttcaattttaaattacggacattatgaaatgtttttttaaaa 9298636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 19278042 - 19278102
Alignment:
Q  37 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattac 96  Q
    ||||||| |||||||||| ||||||||| ||| ||| ||||||||||| ||||||||||||    
T  19278042 tttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattac 19278102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 23091195 - 23091131
Alignment:
Q  37 tttggattgagggtttagaaggggaaggga-gggagggtttacttttc-gtttttaaattacgga 99  Q
    ||||||| |||||||||| ||||||||||| ||||||| |||||||||  |||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacgga 23091131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 26318336 - 26318428
Alignment:
Q  59 ggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatg 151  Q
    |||||||  |||||||| | ||||  ||||||||||||| |  |||| | |||||||| ||||||| |||||||||  |||||||||||||||    
T  26318336 ggaaggggaggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattatatg 26318428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 14515715 - 14515648
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 95  Q
    ||||||| ||||||| |||||||||| ||||||||| | |||||||||||  |||| |||||||||||    
T  14515715 agggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaatta 14515648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 32926737 - 32926784
Alignment:
Q  120 aaatatattaagtgtgattgaagtattatatggtcgtttatcttgtta 167  Q
    ||||| |||||||||||||||||||||||||| || |||||| |||||    
T  32926737 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 32926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 33236197 - 33236122
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    |||||||||||||||||| ||| |||||  || |||| |||||| || | ||||||||| ||||||||||||||||    
T  33236197 ctaagggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggac 33236122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 9051778 - 9051736
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaagggaggg 69  Q
    ||||||||| |||||||||||||||||  ||||||||||||||    
T  9051778 taagggtgtgtttggattgagggtttaagaggggaagggaggg 9051736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 183
Target Start/End: Original strand, 25747403 - 25747489
Alignment:
Q  98 gactatatgacatgtttttct-aaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaacttttta 183  Q
    |||||||| |||||||||| | |||||  |||||  |||| |||||| ||||||| ||||||||| ||||| ||| |||||||||||    
T  25747403 gactatataacatgttttttttaaaatcaattaaacgtgactgaagttttatatgatcgtttatcatgttattatattaacttttta 25747489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 665839 - 665907
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 95  Q
    ||||||||| ||||||| |||||||||| |||||||| || ||||||||| | ||||| |||||||||||    
T  665839 taagggtgtgtttggat-gagggtttaggaggggaagtgaggggagggttcatttttcatttttaaatta 665907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 14548629 - 14548670
Alignment:
Q  41 gattgagggtttagaaggggaagggagggagggtttactttt 82  Q
    |||||||||||| |||||| |||||| |||||||||||||||    
T  14548629 gattgagggtttcgaagggaaagggatggagggtttactttt 14548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 16509299 - 16509403
Alignment:
Q  47 gggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtat 145  Q
    |||||| |||||||| |||| | ||||| ||||||||| ||||| |||||  |||  ||| | ||||||||  |||||| || |||||||||||||||||    
T  16509299 gggtttcgaaggggaggggacgagagggcttacttttcttttttgaattaaagacactataaaatgttttta-aaaataaatcaagtgtgattgaagtat 16509397  T
Q  146 tatatg 151  Q
    ||||||    
T  16509398 tatatg 16509403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 9051529 - 9051605
Alignment:
Q  24 atctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 99  Q
    |||| ||||||  |||||||||||| ||||| |||| || ||||| || |||||||||||  |||||||||||||||    
T  9051529 atcttagggtgcgtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaattacgga 9051605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 9298625 - 9298685
Alignment:
Q  168 atatgttaactttttataaaa-catttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||||||||||||||| |||| ||||||||| |||| | ||||||||| | ||||||||||    
T  9298625 atatgttaactttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaac 9298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 12811070 - 12811034
Alignment:
Q  185 aaaacatttcatagtgtctgcaatttaaaaataaaaa 221  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  12811070 aaaacatttcatagtgtctgtaatttaaaaatgaaaa 12811034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 21606883 - 21606915
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacgga 99  Q
    ||||||||||||||||| |||||||||||||||    
T  21606883 gggagggtttacttttcatttttaaattacgga 21606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 16501 - 16341
Alignment:
Q  67 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtt 166  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| | ||||||| ||||    
T  16501 gggagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 16402  T
Q  167 aatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    ||||||||||| |||||||||||||||||||||||    ||||||||||| ||||||||||    
T  16401 aatatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaac 16341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 16293 - 16363
Alignment:
Q  26 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaatta 95  Q
    |||||||| | ||||||| |||||||||| |||| || |||||| |||||||||||||| |||||||||||    
T  16293 ctaagggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaatta 16363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 225
Target Start/End: Original strand, 6584 - 6780
Alignment:
Q  29 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 127  Q
    ||||||| |||||||||| | ||||| ||| |||||||||| |||||||||||||| |||||||||||| |||||||| || |||| |||||||||| ||    
T  6584 agggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaat 6683  T
Q  128 taagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaa 225  Q
    | |||||||||||||||||||||| ||||||||  ||||||||| |||| |||||  |||| ||||||||||||  | ||||||||||  ||||||||    
T  6684 ttagtgtgattgaagtattatatgatcgtttat-atgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagtaa 6780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 1175 - 1371
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 130  Q
    |||| |||||||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||||||||||| | ||||||| |||||||    |||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgttattctaaa----attaa 1270  T
Q  131 gtgtgattgaagtat----tatatggtcgtttatcttgttaatatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaa 226  Q
    || ||| ||||||||    |||||| ||||||||| ||  ||||||||||||||||| |||||||||||||||||    ||||||||||| |||||||||    
T  1271 gtatgactgaagtattatatatatgatcgtttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaa 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 1644 - 1508
Alignment:
Q  27 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttc-taaaata 124  Q
    ||||||||| |||| ||||||||||||| || |||| ||| ||||||| | ||||||  ||||||||||||| || || | | ||||||||| | |||||    
T  1644 taagggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttctttaaata 1545  T
Q  125 tattaagtgtgattgaagtattatatggtcgtttatc 161  Q
     ||||||| |  || |||||||||||| || ||||||    
T  1544 aattaagtattttttaagtattatatgatcatttatc 1508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 236
Target Start/End: Original strand, 15995 - 16158
Alignment:
Q  73 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatg 172  Q
    ||||||||||| |||||||||||| |||||||| |||||||||| ||||| | |||| |||||||||||||||| |||  | |||| || | ||||||||    
T  15995 gtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtattttataattgtttttcatattaatatg 16094  T
Q  173 ttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactctgtcctc 236  Q
    ||||||||||| ||||||||||||| | || | ||||||||||| |||| |||||||| |||||    
T  16095 ttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaataaactctttcctc 16158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 224
Target Start/End: Original strand, 15320 - 15458
Alignment:
Q  85 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgttaatatgttaactttttat 184  Q
    |||||||| |||||| || || |||||||||||||||||| |||||||||| ||||||||||||||| | |||||||  ||||||||||| || |||||     
T  15320 tttttaaactacggattacataacatgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgttgaccttttaa 15419  T
Q  185 aaaacatttcatagtgtctgcaatttaaaaataaaaagta 224  Q
    |||||| ||||||||||| | |||||||||||||||||||    
T  15420 aaaaca-ttcatagtgtccgtaatttaaaaataaaaagta 15458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 18811 - 18968
Alignment:
Q  68 ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatcttgtta 167  Q
    |||||||||| ||||| ||||||||| || |||||||| |||||| ||||||||||| |||| |||| |||||| ||||||||| || |||||| |||||    
T  18811 ggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcatgtta 18908  T
Q  168 atatgttaactttttataaaacatttcatagtgtctgcaatttaaaaataaaaagtaaac 227  Q
    |||| ||||||| ||| |||| | |||||||||||  | |||||||||| ||||||||||    
T  18909 atatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 18968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 17786 - 17716
Alignment:
Q  25 tctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattac 96  Q
    ||||||||||| ||||||| |||||||||| || ||||||||||| ||||||||||||| ||||||||||||    
T  17786 tctaagggtgtgtttggatggagggtttaggagtggaagggaggg-gggtttacttttcttttttaaattac 17716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  32 gtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 116  Q
    |||| ||||||||||| |||||| ||||||||||| ||||| ||||||||||| |||||||||||| |||  ||||| ||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 3234 - 3189
Alignment:
Q  185 aaaacatttcatagtgtctgcaatttaaaaataaaaagtaaactct 230  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||    
T  3234 aaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactct 3189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 242452 - 242388
Alignment:
Q  37 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 100  Q
    ||||||| || |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  242452 tttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggac 242388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 184843 - 184779
Alignment:
Q  37 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 100  Q
    ||||||| |||||||||| |||| |||||| ||||||||||||| ||| ||||||||||| ||||    
T  184843 tttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaattatggac 184779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 37375 - 37506
Alignment:
Q  21 aaaatctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttcta 119  Q
    |||| |||||||||  |||| ||||||| ||||| |||| |||| |||| |||| | ||||||  ||||||||||||| || || | | |||||||| ||    
T  37375 aaaacctaagggtgcgtttgaattgaggatttaggagggcaaggaaggggagggctcacttttattttttaaattacgaacaatgtaaaatgttttttta 37474  T
Q  120 aaatatattaagtgtgattgaagtattatatg 151  Q
    ||||| || ||||||  ||||||| |||||||    
T  37475 aaataaatcaagtgtttttgaagtgttatatg 37506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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