View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10391_low_22 (Length: 243)
Name: NF10391_low_22
Description: NF10391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10391_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 42508982 - 42508759
Alignment:
| Q |
1 |
cgatgatggctcttgttttctttgccgccggtgtaggatgaaaaacacagtaactccaatcacagccagtgctacacaaacaaccacaacaaccacacaa |
100 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42508982 |
cgatgatggctcttgttttcttcgccgccggtgtaggatgaaaaacacagtaactccaatcacagccagtgctacacaaacaaccacaacaaccacacaa |
42508883 |
T |
|
| Q |
101 |
gtacttgcaattgatgcatgctttataggacatgcagtcaatggtggtccacataaattttcattacctgctcatcattttgatacatatagactggtta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42508882 |
gtacttgcaattgatgcatgctttataggacatgcagtcaatggtgctccacataaattttcattacctgctcatcattttgatacatatagactggtta |
42508783 |
T |
|
| Q |
201 |
agattgatgctgctatatatactt |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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| T |
42508782 |
agattgatgctgctatatatactt |
42508759 |
T |
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