View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10391_low_29 (Length: 209)

Name: NF10391_low_29
Description: NF10391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10391_low_29
NF10391_low_29
[»] chr7 (35 HSPs)
chr7 (40-202)||(3061561-3061724)
chr7 (40-202)||(29954188-29954363)
chr7 (42-192)||(5090866-5091016)
chr7 (42-202)||(7890695-7890856)
chr7 (42-202)||(13400667-13400828)
chr7 (87-202)||(31097954-31098070)
chr7 (97-195)||(3600132-3600231)
chr7 (42-202)||(22003463-22003624)
chr7 (90-184)||(22004461-22004555)
chr7 (101-202)||(22004563-22004665)
chr7 (78-196)||(20959369-20959487)
chr7 (78-196)||(45112702-45112820)
chr7 (101-202)||(7891340-7891442)
chr7 (90-184)||(22004270-22004364)
chr7 (78-202)||(5091023-5091147)
chr7 (90-184)||(7891238-7891332)
chr7 (105-202)||(13927402-13927500)
chr7 (78-202)||(7884928-7885052)
chr7 (98-184)||(13927128-13927214)
chr7 (97-187)||(32656697-32656787)
chr7 (97-202)||(32656797-32656903)
chr7 (42-165)||(7889201-7889324)
chr7 (42-155)||(32035186-32035299)
chr7 (80-152)||(26161916-26161987)
chr7 (79-156)||(27712689-27712765)
chr7 (87-146)||(3600053-3600112)
chr7 (42-156)||(16718985-16719099)
chr7 (42-156)||(17693195-17693309)
chr7 (121-202)||(13927271-13927353)
chr7 (40-86)||(31095118-31095164)
chr7 (121-155)||(16719122-16719156)
chr7 (121-155)||(17693332-17693366)
chr7 (121-155)||(27712788-27712822)
chr7 (51-119)||(22004135-22004203)
chr7 (51-127)||(7891099-7891175)
[»] chr8 (14 HSPs)
chr8 (42-202)||(22732183-22732344)
chr8 (42-196)||(37985425-37985580)
chr8 (42-202)||(18489883-18490044)
chr8 (42-202)||(24011185-24011345)
chr8 (42-196)||(24014095-24014250)
chr8 (78-196)||(19958058-19958176)
chr8 (78-202)||(21637051-21637175)
chr8 (42-155)||(18278552-18278665)
chr8 (87-202)||(18489734-18489860)
chr8 (114-202)||(41377785-41377874)
chr8 (42-138)||(37985586-37985682)
chr8 (79-156)||(410098-410174)
chr8 (40-83)||(18492665-18492708)
chr8 (121-155)||(410041-410075)
[»] chr5 (29 HSPs)
chr5 (87-202)||(20842299-20842415)
chr5 (87-202)||(20844450-20844566)
chr5 (42-202)||(23178625-23178786)
chr5 (90-184)||(23179487-23179581)
chr5 (42-202)||(32671941-32672102)
chr5 (101-202)||(32672849-32672951)
chr5 (42-196)||(10037141-10037296)
chr5 (40-202)||(23178365-23178528)
chr5 (40-202)||(34757288-34757451)
chr5 (101-202)||(23179589-23179691)
chr5 (94-202)||(20844704-20844813)
chr5 (87-202)||(20844941-20845057)
chr5 (87-196)||(20842448-20842558)
chr5 (90-184)||(23179296-23179390)
chr5 (78-202)||(12651281-12651405)
chr5 (78-202)||(39874161-39874285)
chr5 (97-184)||(32672754-32672841)
chr5 (97-202)||(23180083-23180189)
chr5 (97-202)||(23184351-23184457)
chr5 (87-201)||(20845090-20845205)
chr5 (90-154)||(30094369-30094433)
chr5 (97-156)||(3611844-3611903)
chr5 (97-156)||(20109130-20109189)
chr5 (97-156)||(20109898-20109957)
chr5 (121-155)||(3611787-3611821)
chr5 (121-155)||(30094310-30094344)
chr5 (121-155)||(20109073-20109107)
chr5 (121-155)||(20109708-20109742)
chr5 (121-155)||(20109841-20109875)
[»] chr4 (40 HSPs)
chr4 (42-192)||(53285595-53285745)
chr4 (42-196)||(16905788-16905943)
chr4 (42-202)||(52679693-52679854)
chr4 (42-196)||(21380272-21380427)
chr4 (101-202)||(41861915-41862017)
chr4 (90-184)||(41862207-41862301)
chr4 (44-192)||(42345071-42345220)
chr4 (78-202)||(35756412-35756536)
chr4 (78-202)||(42345227-42345351)
chr4 (90-184)||(22673789-22673883)
chr4 (42-202)||(41863128-41863289)
chr4 (101-202)||(52680317-52680419)
chr4 (78-202)||(29363491-29363615)
chr4 (78-196)||(28380247-28380365)
chr4 (78-192)||(29363829-29363943)
chr4 (101-184)||(41862025-41862108)
chr4 (101-184)||(41862116-41862199)
chr4 (42-202)||(22673246-22673407)
chr4 (90-184)||(52680215-52680309)
chr4 (90-184)||(41946724-41946820)
chr4 (78-192)||(29363708-29363822)
chr4 (101-184)||(41946633-41946716)
chr4 (101-178)||(22673893-22673970)
chr4 (78-202)||(53285752-53285876)
chr4 (97-202)||(30390792-30390898)
chr4 (90-184)||(41862398-41862492)
chr4 (101-180)||(41946546-41946625)
chr4 (121-202)||(41946464-41946546)
chr4 (79-156)||(14148570-14148646)
chr4 (79-156)||(14148424-14148500)
chr4 (79-156)||(19518506-19518582)
chr4 (79-156)||(21585322-21585398)
chr4 (79-156)||(25819673-25819749)
chr4 (47-127)||(22673646-22673726)
chr4 (121-155)||(14148513-14148547)
chr4 (121-155)||(19518449-19518483)
chr4 (121-155)||(21585265-21585299)
chr4 (121-155)||(25819772-25819806)
chr4 (51-127)||(52680076-52680152)
chr4 (78-131)||(29363649-29363701)
[»] chr3 (52 HSPs)
chr3 (42-202)||(35713093-35713254)
chr3 (42-202)||(47724504-47724665)
chr3 (87-202)||(6953267-6953383)
chr3 (87-202)||(36947840-36947956)
chr3 (42-202)||(49565969-49566130)
chr3 (42-196)||(43509682-43509837)
chr3 (97-202)||(6953788-6953894)
chr3 (42-202)||(11823906-11824067)
chr3 (90-184)||(18199299-18199393)
chr3 (90-184)||(36093959-36094053)
chr3 (42-202)||(36094888-36095049)
chr3 (87-196)||(36947707-36947817)
chr3 (101-202)||(36947979-36948081)
chr3 (87-202)||(6953406-6953522)
chr3 (87-202)||(6953649-6953765)
chr3 (101-202)||(36093849-36093951)
chr3 (90-184)||(36094150-36094244)
chr3 (8-202)||(851176-851365)
chr3 (87-202)||(855069-855185)
chr3 (97-192)||(18199127-18199223)
chr3 (97-196)||(31483608-31483708)
chr3 (101-202)||(18199401-18199503)
chr3 (42-202)||(33006031-33006191)
chr3 (42-202)||(35860506-35860667)
chr3 (42-202)||(36095103-36095264)
chr3 (78-202)||(1883317-1883441)
chr3 (78-202)||(26943925-26944049)
chr3 (87-195)||(36947569-36947678)
chr3 (44-202)||(26942979-26943138)
chr3 (97-184)||(26943657-26943744)
chr3 (101-202)||(26949097-26949199)
chr3 (78-202)||(36090982-36091106)
chr3 (87-192)||(18256760-18256866)
chr3 (35-169)||(52419531-52419677)
chr3 (120-202)||(6953545-6953628)
chr3 (40-178)||(38662177-38662314)
chr3 (101-202)||(38662117-38662219)
chr3 (122-184)||(854955-855017)
chr3 (78-151)||(18256681-18256753)
chr3 (79-156)||(17657165-17657241)
chr3 (90-154)||(16647453-16647517)
chr3 (97-156)||(13458625-13458684)
chr3 (122-184)||(26949027-26949089)
chr3 (79-156)||(4585523-4585599)
chr3 (97-156)||(12257890-12257949)
chr3 (121-155)||(4585622-4585656)
chr3 (121-155)||(12257972-12258006)
chr3 (121-155)||(13458568-13458602)
chr3 (121-155)||(16647542-16647576)
chr3 (42-119)||(35860375-35860452)
chr3 (51-119)||(36094309-36094377)
chr3 (87-119)||(851166-851198)
[»] chr2 (51 HSPs)
chr2 (42-202)||(26452847-26453008)
chr2 (42-202)||(36440077-36440238)
chr2 (87-202)||(32287408-32287524)
chr2 (42-195)||(19640858-19641012)
chr2 (42-195)||(19839451-19839605)
chr2 (42-196)||(5001100-5001255)
chr2 (42-196)||(5012770-5012925)
chr2 (90-184)||(13905753-13905847)
chr2 (97-202)||(32287279-32287385)
chr2 (87-196)||(35433121-35433231)
chr2 (42-202)||(40602683-40602844)
chr2 (40-202)||(980450-980613)
chr2 (99-202)||(40603325-40603429)
chr2 (90-184)||(13899855-13899949)
chr2 (101-202)||(13905855-13905957)
chr2 (101-202)||(26453492-26453594)
chr2 (42-202)||(42111642-42111803)
chr2 (78-202)||(19641057-19641181)
chr2 (78-202)||(19839650-19839774)
chr2 (97-202)||(1925619-1925725)
chr2 (42-202)||(21591158-21591319)
chr2 (90-184)||(26453390-26453484)
chr2 (90-184)||(40603226-40603320)
chr2 (78-202)||(180195-180319)
chr2 (78-202)||(979997-980121)
chr2 (78-202)||(1501779-1501903)
chr2 (78-202)||(2444108-2444232)
chr2 (78-202)||(13899085-13899209)
chr2 (78-202)||(14039702-14039826)
chr2 (87-202)||(27999630-27999746)
chr2 (87-202)||(28090364-28090480)
chr2 (87-202)||(28096687-28096803)
chr2 (97-202)||(32287015-32287121)
chr2 (87-159)||(35433010-35433082)
chr2 (97-178)||(204367-204448)
chr2 (87-159)||(1925514-1925586)
chr2 (120-202)||(32287142-32287225)
chr2 (121-202)||(980245-980327)
chr2 (79-156)||(2296966-2297042)
chr2 (79-156)||(25643727-25643803)
chr2 (79-156)||(6120827-6120903)
chr2 (121-155)||(2297065-2297099)
chr2 (121-155)||(6120926-6120960)
chr2 (121-155)||(25643826-25643860)
chr2 (51-127)||(26453251-26453327)
chr2 (44-88)||(1271945-1271989)
chr2 (97-156)||(13900059-13900121)
chr2 (40-88)||(30915407-30915455)
chr2 (121-155)||(13900144-13900178)
chr2 (51-119)||(13899720-13899788)
chr2 (51-127)||(40603087-40603163)
[»] chr1 (38 HSPs)
chr1 (87-202)||(45507230-45507346)
chr1 (42-195)||(22194827-22194981)
chr1 (42-195)||(49791595-49791749)
chr1 (42-202)||(48958517-48958678)
chr1 (42-193)||(22194997-22195149)
chr1 (87-202)||(45507379-45507495)
chr1 (42-196)||(50704538-50704693)
chr1 (42-195)||(49791871-49792025)
chr1 (42-202)||(2052536-2052697)
chr1 (90-184)||(39514202-39514296)
chr1 (78-196)||(36455211-36455329)
chr1 (101-202)||(2051950-2052052)
chr1 (42-202)||(2585368-2585528)
chr1 (90-184)||(35598151-35598245)
chr1 (42-202)||(45507049-45507210)
chr1 (97-196)||(48647758-48647858)
chr1 (90-184)||(2052060-2052154)
chr1 (97-202)||(15689394-15689500)
chr1 (78-202)||(7476013-7476137)
chr1 (78-202)||(7476574-7476698)
chr1 (78-202)||(9530040-9530164)
chr1 (78-202)||(15689214-15689338)
chr1 (78-202)||(42492459-42492583)
chr1 (78-202)||(13929107-13929231)
chr1 (101-202)||(35598041-35598143)
chr1 (42-156)||(2051777-2051891)
chr1 (42-156)||(36871037-36871151)
chr1 (101-202)||(35597664-35597765)
chr1 (90-178)||(35597724-35597810)
chr1 (101-159)||(39514136-39514194)
chr1 (40-88)||(26209153-26209201)
chr1 (79-156)||(49791079-49791155)
chr1 (79-156)||(49791456-49791532)
chr1 (121-155)||(49791022-49791056)
chr1 (121-155)||(49791399-49791433)
chr1 (51-127)||(2052217-2052293)
chr1 (123-155)||(2051720-2051752)
chr1 (123-155)||(36870980-36871012)
[»] chr6 (8 HSPs)
chr6 (42-202)||(29374212-29374373)
chr6 (90-196)||(3589246-3589353)
chr6 (42-202)||(29371660-29371821)
chr6 (40-202)||(33049694-33049857)
chr6 (78-196)||(2271841-2271959)
chr6 (78-202)||(24456418-24456542)
chr6 (42-196)||(33007265-33007419)
chr6 (79-156)||(29921016-29921092)
[»] scaffold0160 (3 HSPs)
scaffold0160 (87-204)||(36076-36194)
scaffold0160 (87-196)||(36225-36334)
scaffold0160 (87-159)||(36373-36445)
[»] scaffold0121 (5 HSPs)
scaffold0121 (90-184)||(41187-41281)
scaffold0121 (42-202)||(40777-40938)
scaffold0121 (101-202)||(41380-41482)
scaffold0121 (101-184)||(41289-41372)
scaffold0121 (51-119)||(41047-41115)
[»] scaffold0097 (3 HSPs)
scaffold0097 (78-202)||(44607-44731)
scaffold0097 (42-131)||(48739-48828)
scaffold0097 (51-119)||(51517-51585)
[»] scaffold1113 (1 HSPs)
scaffold1113 (97-202)||(2451-2557)
[»] scaffold0642 (2 HSPs)
scaffold0642 (79-156)||(293-369)
scaffold0642 (121-155)||(392-426)
[»] scaffold0374 (2 HSPs)
scaffold0374 (79-156)||(107-183)
scaffold0374 (121-155)||(50-84)
[»] scaffold0345 (2 HSPs)
scaffold0345 (79-156)||(10204-10280)
scaffold0345 (121-155)||(10303-10337)
[»] scaffold0105 (2 HSPs)
scaffold0105 (79-156)||(28700-28776)
scaffold0105 (121-155)||(28643-28677)
[»] scaffold0119 (2 HSPs)
scaffold0119 (44-88)||(29248-29292)
scaffold0119 (44-88)||(35501-35545)


Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 3061724 - 3061561
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctc 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  3061724 tctcttattcttaaacaaagcactgtcgccctaattatacctaatatttgtagccactttttcctccttcaaaacctaaccatatttcctaattcccctc 3061625  T
Q  140 ctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  3061624 ctccaaaccctaaccatgatctcctaatttccctcctcctaaaacctatctaattgatttccat 3061561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 29954188 - 29954363
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatattt------------gtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||            ||||||| ||||||||||||||||||||||| |||||||    
T  29954188 tctcttattcttaaacaaagcattgtcgtcctaattatacctaatattttaacctaaaattgtagccacttttccctccttcaaaacctaaccatatttc 29954287  T
Q  128 ctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  29954288 ataactcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaacctatctaattgatttccat 29954363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 5090866 - 5091016
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  5090866 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tatcaatttttccctccttcaaaacctaaccatatttcctaattcccctcc 5090964  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaactatctaat 192  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  5090965 tccaaaccctaaccatgatttcctaatttcactcctcctaaacctatctaat 5091016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 7890695 - 7890856
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  7890695 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcc 7890793  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  7890794 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 7890856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 13400828 - 13400667
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  13400828 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 13400730  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  13400729 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 13400667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 31097954 - 31098070
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  31097954 ttgtagccattttttcctccttcaaaacctaaccatatttcttaactcccctcctccaaaccctaactatgatctcctaatttccctcctcctaaaacct 31098053  T
Q  186 atctaattgatgtccat 202  Q
    ||||||||||| |||||    
T  31098054 atctaattgatttccat 31098070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 3600231 - 3600132
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  3600231 ttttccctccttcaaaacctaacgatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattga 3600132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 22003463 - 22003624
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  22003463 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcc 22003561  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  22003562 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 22003624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 22004461 - 22004555
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22004461 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 22004555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 22004563 - 22004665
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  22004563 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 22004662  T
Q  200 cat 202  Q
    |||    
T  22004663 cat 22004665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 20959487 - 20959369
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  20959487 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 20959389  T
Q  178 ctaaaa-ctatctaattgat 196  Q
    |||||| |||||||||||||    
T  20959388 ctaaaacctatctaattgat 20959369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 45112702 - 45112820
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  45112702 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 45112800  T
Q  178 ctaaaa-ctatctaattgat 196  Q
    |||||| |||||||||||||    
T  45112801 ctaaaacctatctaattgat 45112820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 7891340 - 7891442
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  7891340 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 7891439  T
Q  200 cat 202  Q
    |||    
T  7891440 cat 7891442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 22004270 - 22004364
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22004270 tagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 22004364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 5091023 - 5091147
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  5091023 acctaatattt-tagcaactttttcctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 5091121  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  5091122 ctaaaacctatctaattgatttccat 5091147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 7891238 - 7891332
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  7891238 tagctatttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 7891332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 13927402 - 13927500
Alignment:
Q  105 ccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-tatctaattgatgtccat 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||| |||||    
T  13927402 ccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacttacctaattgatttccat 13927500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 7884928 - 7885052
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  7884928 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 7885026  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  7885027 ctaaaacctatctaattgatttccat 7885052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 13927128 - 13927214
Alignment:
Q  98 tttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||| |||||||    
T  13927128 tttccctccttcaaaacctaactatatttcctaatttccctcctccaaaccttaaccatgatttcctaatttccctcctgctaaaac 13927214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 32656697 - 32656787
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaactat 187  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  32656697 ttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaactat 32656787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 32656797 - 32656903
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  32656797 ttttccctcattcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 32656896  T
Q  196 tgtccat 202  Q
    | |||||    
T  32656897 tttccat 32656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 165
Target Start/End: Complemental strand, 7889324 - 7889201
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||  ||||||||||  ||| ||||||||| || ||||||||||  ||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  7889324 tcttatttctaaacaaagctttgttgccctaattttaacctaatatttc-agcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 7889226  T
Q  141 tccaaaccctaaccatgatctccta 165  Q
    ||||||||||||||||||| |||||    
T  7889225 tccaaaccctaaccatgatttccta 7889201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 32035186 - 32035299
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||  |||||||||||||    
T  32035186 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattctctaattcccctcc 32035284  T
Q  141 tccaaaccctaacca 155  Q
    |||||||||| ||||    
T  32035285 tccaaaccctcacca 32035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 26161916 - 26161987
Alignment:
Q  80 ctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaa 152  Q
    ||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26161916 ctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaa 26161987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 27712689 - 27712765
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  27712689 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 27712765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 3600112 - 3600053
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaa 146  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  3600112 ttgtagccacttttccttccttcaaaacctaaccatatttcctaattcccctcctccaaa 3600053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 16718985 - 16719099
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| |||||    
T  16718985 tcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcc 16719083  T
Q  141 tccaaaccctaaccat 156  Q
    |||||||| |||||||    
T  16719084 tccaaaccttaaccat 16719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 17693195 - 17693309
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| |||||    
T  17693195 tcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcc 17693293  T
Q  141 tccaaaccctaaccat 156  Q
    |||||||| |||||||    
T  17693294 tccaaaccttaaccat 17693309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 13927271 - 13927353
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||| |||||||||||||| |||||||||| |||||||||||||| | |||||| ||| ||||||||| |||||    
T  13927271 atatttcctaatttccctcctccaaaccttaaccatgatttcctaatttccctcatgctaaaacctacctaattgatttccat 13927353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 31095118 - 31095164
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatat 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31095118 tctcttattcttaaacaaagcactgtcgccctaattatacctaatat 31095164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 16719122 - 16719156
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  16719122 atatttcctaattcccctcctccaaaccctaacca 16719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 17693332 - 17693366
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  17693332 atatttcctaattcccctcctccaaaccctaacca 17693366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 27712788 - 27712822
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  27712788 atatttcctaattcccctcctccaaaccctaacca 27712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 22004135 - 22004203
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| |||||||||||||||||||||||||    
T  22004135 taaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaac 22004203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 7891099 - 7891175
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| | ||||||||||||||||||||||| |||||||    
T  7891099 taaacaaagctttgttgccctaattttaaccttatattt-tagcaacttttccctccttcaaaacctaaccatatttc 7891175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 22732344 - 22732183
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  22732344 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaaccatattccctaattcccctcc 22732246  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||| |||||    
T  22732245 tccaaaccctaaccatgatttcctaatttcactcctcctaaaacctatctaattgatttccat 22732183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 37985580 - 37985425
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacct-aatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || || ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  37985580 tcttattcctaaacaaagctttgttgccctaattttaacttaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcc 37985482  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  37985481 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgat 37985425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 18489883 - 18490044
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  18489883 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 18489981  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  18489982 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 18490044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 24011345 - 24011185
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcct 141  Q
    |||||||| ||||||||||  ||| |||||||||  ||||||||||| |||| ||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  24011345 tcttattcctaaacaaagctttgttgccctaatttaacctaatattt-tagcaatttttccctccttcaaaatctaaccatatttcataattctcctcct 24011247  T
Q  142 ccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  24011246 ccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 24011185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 24014250 - 24014095
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  24014250 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 24014152  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    |||||||||||||||| || |||||| ||| |||||||||||| |||||||||||||    
T  24014151 tccaaaccctaaccatcatttcctaacttcactcctcctaaaacctatctaattgat 24014095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 19958058 - 19958176
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||| ||||||    
T  19958058 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgatttcctaacttcactcctc 19958156  T
Q  178 ctaaaa-ctatctaattgat 196  Q
    |||||| |||||||||||||    
T  19958157 ctaaaacctatctaattgat 19958176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 21637051 - 21637175
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||||| ||| ||||||    
T  21637051 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcctctcctccaaaccctaaccatgatttcctaacttcactcctc 21637149  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  21637150 ctaaaacctatctaattgatttccat 21637175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 18278665 - 18278552
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  18278665 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 18278567  T
Q  141 tccaaaccctaacca 155  Q
    |||||||||||||||    
T  18278566 tccaaaccctaacca 18278552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 18489860 - 18489734
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccc----------taaccatgatctcctaatttccctcct 176  Q
    |||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||||||          |||||||||||||||||||||||||||    
T  18489860 ttgtagtcacttttccctccttcaaaacataaccatatttcctaattcccctcctccaaaccctaacaaaccctaaccatgatctcctaatttccctcct 18489761  T
Q  177 cctaaaac-tatctaattgatgtccat 202  Q
    |||||||| |||||||||||| |||||    
T  18489760 cctaaaacgtatctaattgatttccat 18489734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 41377874 - 41377785
Alignment:
Q  114 cctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  41377874 cctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 41377785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 37985682 - 37985586
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||    
T  37985682 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccct 37985586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 410174 - 410098
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||    
T  410174 cctaatattt-tagcaacttttccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 410098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 18492708 - 18492665
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaa 83  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  18492708 tctcttattcttaaacaaagcattatcgccctaattatacctaa 18492665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 410075 - 410041
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  410075 atatttcctaattcccctcctccaaaccctaacca 410041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 20842299 - 20842415
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||    
T  20842299 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttcccttctcctaaaacct 20842398  T
Q  186 atctaattgatgtccat 202  Q
    | ||||||||| |||||    
T  20842399 acctaattgatttccat 20842415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 20844450 - 20844566
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  20844450 ttgtagccatttttccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 20844549  T
Q  186 atctaattgatgtccat 202  Q
    | ||||||||| |||||    
T  20844550 acctaattgatttccat 20844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 23178625 - 23178786
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  23178625 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcc 23178723  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  23178724 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 23178786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 23179487 - 23179581
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23179487 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 23179581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 32671941 - 32672102
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| |||||||||||| |||||||||||| ||||||||||||| ||||||    
T  32671941 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccatcaaaacctaaccatatttcctaatttccctcc 32672039  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||| ||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  32672040 tccaaaccctaactatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 32672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 32672849 - 32672951
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  32672849 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 32672948  T
Q  200 cat 202  Q
    |||    
T  32672949 cat 32672951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 10037141 - 10037296
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  10037141 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 10037239  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    |||||||||||||||| || |||||| ||| |||||||||||| | |||||||||||    
T  10037240 tccaaaccctaaccatcatttcctaacttcactcctcctaaaatcaatctaattgat 10037296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 23178365 - 23178528
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  23178365 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 23178463  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||| |||||    
T  23178464 cctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccat 23178528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 34757288 - 34757451
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  34757288 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 34757386  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||| |||||    
T  34757387 cctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccat 34757451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 23179589 - 23179691
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  23179589 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 23179688  T
Q  200 cat 202  Q
    |||    
T  23179689 cat 23179691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 20844704 - 20844813
Alignment:
Q  94 catttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaat 192  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| |||||    
T  20844704 catttttccctcattcaaaacctaacgatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaacctacctaat 20844803  T
Q  193 tgatgtccat 202  Q
    |||| |||||    
T  20844804 tgatttccat 20844813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 20844941 - 20845057
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||| ||    
T  20844941 ttgtagccactttttcctccttcaaaacctaacaatatttcctaattcccttcctccaaaccctaactatgatttcctaatttacctcctcctaaaacct 20845040  T
Q  186 atctaattgatgtccat 202  Q
    | ||||||||| |||||    
T  20845041 acctaattgatttccat 20845057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 20842448 - 20842558
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  20842448 ttgtagccatttttccctcattcaaaacataaccatatttcataattcccctcctccaaaccctaaccatgattttctaatttccctcctcctaaaacct 20842547  T
Q  186 atctaattgat 196  Q
    | |||||||||    
T  20842548 acctaattgat 20842558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 23179296 - 23179390
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  23179296 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcccaaccctaaccatgatttcctaatttccctcttcctaaaac 23179390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 12651281 - 12651405
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  12651281 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 12651379  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  12651380 ctaaaacctatctaattgatttccat 12651405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 39874161 - 39874285
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  39874161 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 39874259  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  39874260 ctaaaacctatctaattgatttccat 39874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 32672754 - 32672841
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  32672754 ttttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaatttccctcctcctaaaac 32672841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 23180083 - 23180189
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||    
T  23180083 ttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattga 23180182  T
Q  196 tgtccat 202  Q
    | |||||    
T  23180183 tttccat 23180189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 23184351 - 23184457
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||    
T  23184351 ttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattga 23184450  T
Q  196 tgtccat 202  Q
    | |||||    
T  23184451 tttccat 23184457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 20845090 - 20845205
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| || |||||||||||||| ||||| ||    
T  20845090 ttgtggccacttttccctccttcaaaacctaactatatttcctaattctcctccttcaaaccctaaccatgatttcgtaatttccctcctcataaaacct 20845189  T
Q  186 atctaattgatgtcca 201  Q
    | ||||||||| ||||    
T  20845190 acctaattgatttcca 20845205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 30094433 - 30094369
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaacc 154  Q
    |||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  30094433 tagcaatttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 30094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 3611903 - 3611844
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  3611903 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 3611844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 20109189 - 20109130
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  20109189 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 20109957 - 20109898
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  20109957 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 3611821 - 3611787
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  3611821 atatttcctaattcccctcctccaaaccctaacca 3611787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 30094344 - 30094310
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  30094344 atatttcctaattcccctcctccaaaccctaacca 30094310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 20109107 - 20109073
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  20109107 atattttctaattcccctcctccaaaccctaacca 20109073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 20109742 - 20109708
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  20109742 atattttctaattcccctcctccaaaccctaacca 20109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 20109875 - 20109841
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  20109875 atattttctaattcccctcctccaaaccctaacca 20109841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 7e-45; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 53285595 - 53285745
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  53285595 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tatcaatttttccctccttcaaaacctaaccatatttcctaattcccctcc 53285693  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaactatctaat 192  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  53285694 tccaaaccctaaccatgatttcctaatttcactcctcctaaacctatctaat 53285745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 16905788 - 16905943
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  16905788 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 16905886  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  16905887 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgat 16905943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 52679693 - 52679854
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||| ||||||||||||||||| ||||||||||||| ||||||    
T  52679693 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttctctccttcaaaacctaaccatatttcctaatttccctcc 52679791  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  52679792 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 52679854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 21380272 - 21380427
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||  | ||||||||||||||||||||||| ||||||||||||||||||||    
T  21380272 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagaaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 21380370  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  21380371 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgat 21380427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 41862017 - 41861915
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  41862017 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 41861918  T
Q  200 cat 202  Q
    |||    
T  41861917 cat 41861915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 41862301 - 41862207
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41862301 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41862207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 44 - 192
Target Start/End: Original strand, 42345071 - 42345220
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctc 142  Q
    |||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42345071 ttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctc 42345169  T
Q  143 caaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaat 192  Q
    ||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  42345170 caaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaat 42345220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 35756412 - 35756536
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  35756412 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 35756510  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  35756511 ctaaaacctatctaattgatttccat 35756536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 42345227 - 42345351
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  42345227 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 42345325  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  42345326 ctaaaacctatctaattgatttccat 42345351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 22673789 - 22673883
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  22673789 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccataatttcctaatttccctcctcctaaaac 22673883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 41863289 - 41863128
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacct-aatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || || ||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  41863289 tcttattcctaaacaaagctttgttgccctaattttaacttaatattt-tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcc 41863191  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  41863190 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 41863128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 52680317 - 52680419
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  52680317 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 52680416  T
Q  200 cat 202  Q
    |||    
T  52680417 cat 52680419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 29363615 - 29363491
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  29363615 acctaatattt-tagcaacttttccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 29363517  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  29363516 ctaaaacctatctaattgatttccat 29363491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 28380247 - 28380365
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  28380247 acctaatattt-tagcaacttttccccccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 28380345  T
Q  178 ctaaaa-ctatctaattgat 196  Q
    |||||| |||||||||||||    
T  28380346 ctaaaacctatctaattgat 28380365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 29363943 - 29363829
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  29363943 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 29363845  T
Q  178 ctaaaa-ctatctaat 192  Q
    |||||| |||||||||    
T  29363844 ctaaaacctatctaat 29363829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 41862108 - 41862025
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41862108 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41862025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 41862199 - 41862116
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41862199 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41862116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 22673246 - 22673407
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||  ||| ||||||||||||| ||||||||||||| ||||||    
T  22673246 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttatctctttcaaaacctaaccatatttcctaatttccctcc 22673344  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||||||| |||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  22673345 tccaaaccttaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 22673407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 52680215 - 52680309
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  52680215 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 52680309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 41946820 - 41946724
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatat--ttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41946820 tagccacttttccctccttcaaaacctaaccatatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41946724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 29363822 - 29363708
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  29363822 acctaatattt-tagcaacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 29363724  T
Q  178 ctaaaa-ctatctaat 192  Q
    |||||| |||||||||    
T  29363723 ctaaaacctatctaat 29363708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 41946716 - 41946633
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41946716 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41946633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 22673893 - 22673970
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22673893 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 22673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 53285752 - 53285876
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  53285752 acctaatattt-tagcaactttttcctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 53285850  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||| ||||||| |||||    
T  53285851 ctaaaacctatccaattgatttccat 53285876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 30390898 - 30390792
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||| |||||| ||| |||||||||||| ||||||||||||    
T  30390898 ttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaactatgatttcctaacttcactcctcctaaaacctatctaattga 30390799  T
Q  196 tgtccat 202  Q
    | |||||    
T  30390798 tttccat 30390792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 41862492 - 41862398
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||| ||||| ||||||||||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41862492 tagccactttaccctctttcaaaacctaaccatattttctatttcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41862398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 41946625 - 41946546
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctccta 180  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  41946625 ccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctccta 41946546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 41946546 - 41946464
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||||| |||||    
T  41946546 atatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcctaaaatctatctaattgatttccat 41946464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 14148646 - 14148570
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  14148646 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 14148500 - 14148424
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | ||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  14148500 cctaatattt-tagcaacttttctctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 19518582 - 19518506
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  19518582 cctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 19518506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 21585398 - 21585322
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  21585398 cctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 21585322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 25819673 - 25819749
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  25819673 cctaatattt-tagcaacttttccctcctttaaaacataaccatatttcctaattctcctcctccaaaccttaaccat 25819749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 22673646 - 22673726
Alignment:
Q  47 ttcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  22673646 ttcttaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttc 22673726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 14148547 - 14148513
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  14148547 atatttcctaattcccctcctccaaaccctaacca 14148513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 19518483 - 19518449
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  19518483 atatttcctaattcccctcctccaaaccctaacca 19518449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 21585299 - 21585265
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  21585299 atatttcctaattcccctcctccaaaccctaacca 21585265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 25819772 - 25819806
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  25819772 atatttcctaattcccctcctccaaaccctaacca 25819806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 52680076 - 52680152
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| ||||||||||||||||||||||||| |||||||    
T  52680076 taaacaaagctttgttgccctaattttaaccttatattt-tagcaatttttccctccttcaaaacctaaccatatttc 52680152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 29363701 - 29363649
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaa 131  Q
    ||||||||||| |||| | ||||||||||||||||| ||||| |||||||||||    
T  29363701 acctaatattt-tagcaacttttccctccttcaaaatctaaccatatttcctaa 29363649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 35713093 - 35713254
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  35713093 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 35713191  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  35713192 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 35713254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 47724504 - 47724665
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  47724504 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 47724602  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  47724603 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 47724665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 6953383 - 6953267
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  6953383 ttgtaaccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 6953284  T
Q  186 atctaattgatgtccat 202  Q
    ||||||||||| |||||    
T  6953283 atctaattgatttccat 6953267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 36947956 - 36947840
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-t 185  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  36947956 ttgtagccacttttccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacat 36947857  T
Q  186 atctaattgatgtccat 202  Q
    ||||||||||| |||||    
T  36947856 atctaattgatttccat 36947840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 49566130 - 49565969
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  49566130 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcc 49566032  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  49566031 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 49565969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 43509837 - 43509682
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  43509837 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaaccatatttcctaatttccctcc 43509739  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    ||||||||| ||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  43509738 tccaaaccccaaccatgatttcctaacttcactcctcctaaaacctatctaattgat 43509682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 6953894 - 6953788
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  6953894 ttttccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaatctatctaattga 6953795  T
Q  196 tgtccat 202  Q
    | |||||    
T  6953794 tttccat 6953788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 11823906 - 11824067
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||| |    
T  11823906 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattccccttc 11824004  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||| ||||| ||||||||||||| |||||    
T  11824005 tccaaaccctaaccatgatttcctaacttcactcctcataaaacctatctaattgatttccat 11824067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 18199299 - 18199393
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18199299 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 18199393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 36094053 - 36093959
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36094053 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 36093959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 36095049 - 36094888
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  36095049 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcc 36094951  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  36094950 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 36094888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 36947817 - 36947707
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |    
T  36947817 ttgtagccacttttccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaatat 36947718  T
Q  186 atctaattgat 196  Q
    |||||||||||    
T  36947717 atctaattgat 36947707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 36948081 - 36947979
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-tatctaattgatgtc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||    
T  36948081 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacatatctaattgatttc 36947982  T
Q  200 cat 202  Q
    |||    
T  36947981 cat 36947979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 6953522 - 6953406
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  6953522 ttgtaaccacttttccctcccttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 6953423  T
Q  186 atctaattgatgtccat 202  Q
    ||||||||||| |||||    
T  6953422 atctaattgatttccat 6953406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 6953765 - 6953649
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| ||    
T  6953765 ttgtaaccacttttccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctgttaaaacct 6953666  T
Q  186 atctaattgatgtccat 202  Q
    ||||||||||| |||||    
T  6953665 atctaattgatttccat 6953649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 36093951 - 36093849
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  36093951 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 36093852  T
Q  200 cat 202  Q
    |||    
T  36093851 cat 36093849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 36094244 - 36094150
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  36094244 tagccacttttccctccttcaaaacctaacaatatttcctaattcccctcctcccaaccctaaccatgatttcctaatttccctcttcctaaaac 36094150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 8 - 202
Target Start/End: Original strand, 851176 - 851365
Alignment:
Q  8 ttttccctctttcaaaacctaaccatatctcttctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctcc 106  Q
    ||||||||| |||||||||||||  |||||    |||||||||||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||    
T  851176 ttttccctccttcaaaacctaac--tatct----tcttattcttaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcc 851268  T
Q  107 ttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||| |||||  |||||||||||||||||||| |||||||| || | |||| ||| |||||||||||| ||||||||||||| |||||    
T  851269 ttcaaaacctaaccatattctctaattcccctcctccaaactctaaccataatttgctaacttcactcctcctaaaacctatctaattgatttccat 851365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 855069 - 855185
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||    
T  855069 ttgtagacacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaactatgatttcctaatttccctcctcctaaaacct 855168  T
Q  186 atctaattgatgtccat 202  Q
    | ||||||||| |||||    
T  855169 acctaattgatttccat 855185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 18199223 - 18199127
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaat 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  18199223 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaat 18199127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 31483608 - 31483708
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  31483608 ttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 31483707  T
Q  196 t 196  Q
    |    
T  31483708 t 31483708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 18199401 - 18199503
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||||| ||    
T  18199401 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcctaaaatctatctaattgatttc 18199500  T
Q  200 cat 202  Q
    |||    
T  18199501 cat 18199503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 33006191 - 33006031
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  33006191 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacc-tatttcctaattcccctcc 33006094  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||||||||||||||| || |||||| ||| ||||||| |||| ||||||||||||| |||||    
T  33006093 tccaaaccctaaccatcatttcctaacttcactcctccgaaaacctatctaattgatttccat 33006031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 35860667 - 35860506
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| ||||||||||||| || |||    
T  35860667 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaatttccttcc 35860569  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||| ||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  35860568 tccaaacgctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 35860506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 36095264 - 36095103
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| ||||||||||||| || |||    
T  36095264 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaatttccttcc 36095166  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||| ||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  36095165 tccaaacgctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 36095103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 1883441 - 1883317
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| |||||| ||| ||||||    
T  1883441 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaactatgatttcctaacttcactcctc 1883343  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  1883342 ctaaaacctatctaattgatttccat 1883317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 26943925 - 26944049
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  26943925 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 26944023  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  26944024 ctaaaacctatctaattgatttccat 26944049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 36947678 - 36947569
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-t 185  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| |  ||||||||||||||||||||| |    
T  36947678 ttgtagccacttttccctccttcaaaacctaaccatatttccaaattcccctcctccaaaccctaactatgattttttaatttccctcctcctaaaacat 36947579  T
Q  186 atctaattga 195  Q
    ||||||||||    
T  36947578 atctaattga 36947569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 202
Target Start/End: Original strand, 26942979 - 26943138
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctc 142  Q
    |||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||||    
T  26942979 ttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctc 26943077  T
Q  143 caaaccctaaccatgatctcctaatttccctcctcctaaa-actatctaattgatgtccat 202  Q
    ||||||||||||||||| | |||| ||| |||||||||||  ||||||||||||| |||||    
T  26943078 caaaccctaaccatgattttctaacttcactcctcctaaagcctatctaattgatttccat 26943138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 26943657 - 26943744
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  26943657 ttttccctccttcaaaacctaaccatatttactaattcccctcctccaaaccctaaccatgatttcttaatttccctcctcctaaaac 26943744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 26949097 - 26949199
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||| ||    
T  26949097 ccctccttcaaaacctaaccatatttcctaactcccctcctccaaactctaaccatgatttcctaatttccctcttcctaaaacctatctaattgatttc 26949196  T
Q  200 cat 202  Q
    |||    
T  26949197 cat 26949199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 36091106 - 36090982
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||| |||||| ||| ||||||    
T  36091106 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctagttcctctcctccaaaccctaaccatgatttcctaacttcactcctc 36091008  T
Q  178 ctaaaac-tatctaattgatgtccat 202  Q
    ||||||| |||||||||||| |||||    
T  36091007 ctaaaacatatctaattgatttccat 36090982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 18256866 - 18256760
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | |||| ||| |||||||||||| ||    
T  18256866 ttgtagtcacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaactatgattttctaacttcactcctcctaaaacct 18256767  T
Q  186 atctaat 192  Q
    |||||||    
T  18256766 atctaat 18256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 52419677 - 52419531
Alignment:
Q  35 tctcttctcttattcttaaacaaagcactgtcgccctaattatacctaatattt------------gtagccatttttccctccttcaaaacctaacaat 122  Q
    |||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||            ||||||| ||||||||||||||||||||||| ||    
T  52419677 tctcatctcttattcataaacaaagcactgttgccttaattatacctaatatttaacctaaaaatcgtagccacttttccctccttcaaaacctaaccat 52419578  T
Q  123 atttcctaattcccctcctccaaaccctaaccatgatctcctaattt 169  Q
    |||| ||||||||||| ||||||| |||||||||||| |||||||||    
T  52419577 attttctaattccccttctccaaatcctaaccatgatttcctaattt 52419531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 6953628 - 6953545
Alignment:
Q  120 aatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||||    
T  6953628 aatatttcctaattcccctcctccaaaccctaaccatgattttctaatttccctcctcctaaaacctatctaattgatttccat 6953545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 38662314 - 38662177
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| |||||||||   ||| ||||||||| || |||||||||| |||| | ||||| ||||||||||||||||| ||||||||||||||||||    
T  38662314 tctcttattcctaaacaaagttttgttgccctaattttaacctaatattt-tagcaacttttctctccttcaaaacctaaccatatttcctaattcccct 38662216  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcc 178  Q
    |||||||| ||||||||| || |||||||| |||||||||    
T  38662215 cctccaaaacctaaccat-atttcctaattcccctcctcc 38662177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 38662219 - 38662117
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||| |||| ||||| | |||| ||| |||||||||||| ||||||||||||| ||    
T  38662219 ccctcctccaaaacctaaccatatttcctaattcccctcctccaaaccataacaatgattttctaacttcactcctcctaaaacctatctaattgatttc 38662120  T
Q  200 cat 202  Q
    |||    
T  38662119 cat 38662117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 854955 - 855017
Alignment:
Q  122 tatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  854955 tattttctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 855017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 18256753 - 18256681
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaacccta 151  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18256753 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaacccta 18256681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 17657165 - 17657241
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  17657165 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 17657241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 16647453 - 16647517
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaacc 154  Q
    |||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  16647453 tagcaatttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 16647517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 13458684 - 13458625
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  13458684 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 13458625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 26949027 - 26949089
Alignment:
Q  122 tatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  26949027 tatttcataattcccatcctccaaaccctaaccatgattttctaatttccctcctcctaaaac 26949089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 4585523 - 4585599
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  4585523 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 4585599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 12257890 - 12257949
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  12257890 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 12257949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 4585622 - 4585656
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  4585622 atatttcctaattcccctcctccaaaccctaacca 4585656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 12257972 - 12258006
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  12257972 atatttcctaattcccctcctccaaaccctaacca 12258006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 13458602 - 13458568
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  13458602 atatttcctaattcccctcctccaaaccctaacca 13458568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 16647542 - 16647576
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  16647542 atatttcctaattcccctcctccaaaccctaacca 16647576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 35860452 - 35860375
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| ||||||||||||    
T  35860452 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaac 35860375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 36094377 - 36094309
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  36094377 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 36094309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 851166 - 851198
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||| |||||||||||||||||||||||    
T  851166 ttgtagccacttttccctccttcaaaacctaac 851198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 26452847 - 26453008
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  26452847 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcc 26452945  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  26452946 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 26453008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 36440238 - 36440077
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  36440238 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaactatatttcctaattcccctcc 36440140  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  36440139 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 36440077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 32287408 - 32287524
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-t 185  Q
    ||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32287408 ttgtaaccacttttccctccttcaaaacctaatcatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaactt 32287507  T
Q  186 atctaattgatgtccat 202  Q
    ||||||||||| |||||    
T  32287508 atctaattgatttccat 32287524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 19640858 - 19641012
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  19640858 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 19640956  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  19640957 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 19641012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 19839451 - 19839605
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  19839451 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 19839549  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  19839550 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 19839605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 5001255 - 5001100
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  5001255 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccttatttcctaattcccctcc 5001157  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  5001156 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgat 5001100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 5012925 - 5012770
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  5012925 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccttatttcctaattcccctcc 5012827  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  5012826 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgat 5012770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 13905753 - 13905847
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13905753 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 13905847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 32287279 - 32287385
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  32287279 ttttccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccatcctcctaaaacctatctaattga 32287378  T
Q  196 tgtccat 202  Q
    | |||||    
T  32287379 tttccat 32287385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 35433231 - 35433121
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  35433231 ttgtagccacttttccctccttcaaaacctaaccatatttcttaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 35433132  T
Q  186 atctaattgat 196  Q
    | |||||||||    
T  35433131 acctaattgat 35433121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 40602683 - 40602844
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||| ||||| |||||| |||||| ||||||    
T  40602683 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaatctaaccatattttctaatttccctcc 40602781  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  40602782 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 40602844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 980613 - 980450
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  980613 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 980515  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||| |||||    
T  980514 cctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccat 980450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 40603325 - 40603429
Alignment:
Q  99 ttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatg 197  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||     
T  40603325 ttccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatt 40603424  T
Q  198 tccat 202  Q
    |||||    
T  40603425 tccat 40603429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 13899855 - 13899949
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13899855 tagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 13899949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 13905855 - 13905957
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| ||    
T  13905855 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcatttcctaatttccctcctcctaaaacctatctaattgatttc 13905954  T
Q  200 cat 202  Q
    |||    
T  13905955 cat 13905957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 26453492 - 26453594
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  26453492 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 26453591  T
Q  200 cat 202  Q
    |||    
T  26453592 cat 26453594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 42111803 - 42111642
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | | ||||||||||||||||||||||| |||||| |||||||||||||    
T  42111803 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-taacaacttttccctccttcaaaacctaaccatattttctaattcccctcc 42111705  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||||||||||||||| || |||||| ||| |||||||||||| ||||||||||||| |||||    
T  42111704 tccaaaccctaaccatcatttcctaacttcactcctcctaaaacctatctaattgatttccat 42111642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 19641057 - 19641181
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||    
T  19641057 acctaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaacttcactcctc 19641155  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
     ||||| ||||||||||||| |||||    
T  19641156 ataaaacctatctaattgatttccat 19641181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 19839650 - 19839774
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||    
T  19839650 acctaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaacttcactcctc 19839748  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
     ||||| ||||||||||||| |||||    
T  19839749 ataaaacctatctaattgatttccat 19839774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 1925725 - 1925619
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||    
T  1925725 ttttccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccattatttcctaatttccctcctcctaaaacctacctaattga 1925626  T
Q  196 tgtccat 202  Q
    | |||||    
T  1925625 tttccat 1925619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 21591319 - 21591158
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||  |||||||||||||    
T  21591319 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattctctaattcccctcc 21591221  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    | |||| |||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  21591220 ttcaaagcctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 21591158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 26453390 - 26453484
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  26453390 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 26453484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 40603226 - 40603320
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  40603226 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 40603320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 180195 - 180319
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  180195 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 180293  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  180294 ctaaaacctatctaattgatttccat 180319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 980121 - 979997
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  980121 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 980023  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  980022 ctaaaacctatctaattgatttccat 979997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 1501779 - 1501903
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | |||| ||| ||||||    
T  1501779 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacaatgattttctaacttcactcctc 1501877  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  1501878 ctaaaacctatctaattgatttccat 1501903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 2444108 - 2444232
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  2444108 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 2444206  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  2444207 ctaaaacctatctaattgatttccat 2444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 13899085 - 13899209
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||    
T  13899085 acctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctc 13899183  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  13899184 ctaaaacctatctaattgatttccat 13899209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 14039702 - 14039826
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||| ||| ||||||    
T  14039702 acctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaacaatgatttcctaacttcactcctc 14039800  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  14039801 ctaaaacctatctaattgatttccat 14039826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 27999746 - 27999630
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||    
T  27999746 ttgtagccacttttccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctcatcctaaaacct 27999647  T
Q  186 atctaattgatgtccat 202  Q
    | ||||||||| |||||    
T  27999646 acctaattgatttccat 27999630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 28090480 - 28090364
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||    
T  28090480 ttgtagccacttttccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctcatcctaaaacct 28090381  T
Q  186 atctaattgatgtccat 202  Q
    | ||||||||| |||||    
T  28090380 acctaattgatttccat 28090364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 28096803 - 28096687
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||    
T  28096803 ttgtagccacttttccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctcatcctaaaacct 28096704  T
Q  186 atctaattgatgtccat 202  Q
    | ||||||||| |||||    
T  28096703 acctaattgatttccat 28096687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 32287015 - 32287121
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    |||||||||||| |||||||||| | ||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  32287015 ttttccctcctttaaaacctaactacatttcctgattcctctcctccaaaccctaaccatgattttctaatttccctcctcctaaaacctatctaattga 32287114  T
Q  196 tgtccat 202  Q
    | |||||    
T  32287115 tttccat 32287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 35433082 - 35433010
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  35433082 ttgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgat 35433010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 204367 - 204448
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcc 178  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||||| ||| |||||||    
T  204367 ttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcc 204448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 1925586 - 1925514
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  1925586 ttgtagccacttttctctccttcaaaacctaaccatatttcctaattccccttctccaaaccctaaccatgat 1925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 32287142 - 32287225
Alignment:
Q  120 aatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-tatctaattgatgtccat 202  Q
    ||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| |||||||| |||||    
T  32287142 aatattttctaattcccctcctccaaaccttaaccatgatttcctaatttccctcctcctaaaacttatgtaattgatttccat 32287225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 980327 - 980245
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||| |||||    
T  980327 atatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccat 980245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 2296966 - 2297042
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  2296966 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 2297042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 25643727 - 25643803
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  25643727 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 25643803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 6120827 - 6120903
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||| ||||||| ||||||||||||| |||||||    
T  6120827 cctaatattt-tagcaacttttccctcctttaaaacctaaccatattttctaattctcctcctccaaaccttaaccat 6120903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 2297065 - 2297099
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  2297065 atatttcctaattcccctcctccaaaccctaacca 2297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 6120926 - 6120960
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  6120926 atatttcctaattcccctcctccaaaccctaacca 6120960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 25643826 - 25643860
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  25643826 atatttcctaattcccctcctccaaaccctaacca 25643860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 26453251 - 26453327
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  26453251 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttc 26453327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 1271945 - 1271989
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| |||||||||  |||||||||||    
T  1271945 ttattcttaaacaaagcactgttgccctaattccacctaatattt 1271989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 13900059 - 13900121
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaatt---cccctcctccaaaccctaaccat 156  Q
    |||||| ||||| |||||||||| |||||||||||||   | |||||||||||||||||||||    
T  13900059 ttttccatcctttaaaacctaaccatatttcctaattctcctcctcctccaaaccctaaccat 13900121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 30915407 - 30915455
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||||||    
T  30915407 tctcttattcttaaacaaagaactgttgccctaattccacctaatattt 30915455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 13900144 - 13900178
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  13900144 atattttctaattcccctcctccaaaccctaacca 13900178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 13899720 - 13899788
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  13899720 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 13899788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 40603087 - 40603163
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| | ||||||||||||||||||||||| |||||||    
T  40603087 taaacaaagctttgttgccctaattttaaccttatattt-tagcaacttttccctccttcaaaacctaaccatatttc 40603163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 4e-43; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 45507346 - 45507230
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  45507346 ttgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 45507247  T
Q  186 atctaattgatgtccat 202  Q
    | ||||||||| |||||    
T  45507246 acctaattgatttccat 45507230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 22194827 - 22194981
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  22194827 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 22194925  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  22194926 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 22194981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 49791749 - 49791595
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||| |||     
T  49791749 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacgatatttcctaattcctctct 49791651  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  49791650 tccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattga 49791595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 48958517 - 48958678
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  48958517 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 48958615  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  48958616 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 48958678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 22194997 - 22195149
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  22194997 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 22195095  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaatt 193  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||    
T  22195096 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaatt 22195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 45507495 - 45507379
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  45507495 ttgtagccatttttcctttcttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 45507396  T
Q  186 atctaattgatgtccat 202  Q
    | ||||||||| |||||    
T  45507395 acctaattgatttccat 45507379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 50704538 - 50704693
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  50704538 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 50704636  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    ||||||| ||||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  50704637 tccaaactctaaccatgatttcctaacttcactcctcctaaaacctatctaattgat 50704693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 49792025 - 49791871
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||| |||     
T  49792025 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacgatatttcctaattcctctct 49791927  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaac-tatctaattga 195  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||||||||||    
T  49791926 tccaaaccctaaccatgattttctaatttccctcctcctaaaacatatctaattga 49791871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 2052697 - 2052536
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||| |||||| ||||||    
T  2052697 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattttctaatttccctcc 2052599  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||||||||||||||| || |||||| ||| |||||||||||| ||||||||||||| |||||    
T  2052598 tccaaaccctaaccataatttcctaacttcactcctcctaaaacctatctaattgatttccat 2052536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 39514296 - 39514202
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39514296 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 39514202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 36455211 - 36455329
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  36455211 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 36455309  T
Q  178 ctaaaa-ctatctaattgat 196  Q
    |||||| |||||||||||||    
T  36455310 ctaaaacctatctaattgat 36455329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 2052052 - 2051950
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  2052052 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 2051953  T
Q  200 cat 202  Q
    |||    
T  2051952 cat 2051950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 2585368 - 2585528
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    ||||||||| |||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  2585368 tcttattct-aaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 2585465  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    || |||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  2585466 tctaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 2585528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 35598245 - 35598151
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  35598245 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctactaaaac 35598151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 45507210 - 45507049
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||| | ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| |||||||||| |||    
T  45507210 tcttatacctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccttcc 45507112  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  45507111 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 45507049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 48647758 - 48647858
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  48647758 ttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 48647857  T
Q  196 t 196  Q
    |    
T  48647858 t 48647858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 2052154 - 2052060
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  2052154 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 2052060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 15689394 - 15689500
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  15689394 ttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 15689493  T
Q  196 tgtccat 202  Q
    | |||||    
T  15689494 tttccat 15689500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 7476013 - 7476137
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  7476013 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 7476111  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  7476112 ctaaaacctatctaattgatttccat 7476137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 7476574 - 7476698
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  7476574 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 7476672  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  7476673 ctaaaacctatctaattgatttccat 7476698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 9530040 - 9530164
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  9530040 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 9530138  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  9530139 ctaaaacctatctaattgatttccat 9530164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 15689214 - 15689338
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||| ||| ||||||    
T  15689214 acctaatattt-tagcaaattttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaacttcactcctc 15689312  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  15689313 ctaaaacctatctaattgatttccat 15689338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 42492459 - 42492583
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  42492459 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 42492557  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  42492558 ctaaaacctatctaattgatttccat 42492583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 13929231 - 13929107
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| |||||| ||| ||| ||    
T  13929231 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattaccaaattcccctcctccaaaccctaaccatgatttcctaacttcactcatc 13929133  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  13929132 ctaaaacctatctaattgatttccat 13929107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 35598143 - 35598041
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||    
T  35598143 ccctccttcaaaacctaagcatgtttcctaatttccctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaacctatctaattgatttc 35598044  T
Q  200 cat 202  Q
    |||    
T  35598043 cat 35598041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 2051891 - 2051777
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||    
T  2051891 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcc 2051793  T
Q  141 tccaaaccctaaccat 156  Q
    ||||||||||||||||    
T  2051792 tccaaaccctaaccat 2051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 36871151 - 36871037
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||    
T  36871151 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcc 36871053  T
Q  141 tccaaaccctaaccat 156  Q
    ||||||||||||||||    
T  36871052 tccaaaccctaaccat 36871037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 35597765 - 35597664
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||| |||| |||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||    
T  35597765 ccctcctccaaaccctaaccatatttcctaattccc-tcctccaaatcctaaccatgatttcctaattttcctcctcctaaaacctatctaattgatttc 35597667  T
Q  200 cat 202  Q
    |||    
T  35597666 cat 35597664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 35597810 - 35597724
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcc 178  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||| |||||||||||    
T  35597810 tagccacttttccctccttcaaaacctaatcatatttcctaattcccctcctccaaaccctaaccat-atttcctaa-ttccctcctcc 35597724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 39514194 - 39514136
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39514194 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgat 39514136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 26209153 - 26209201
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26209153 tctcttattcttaaacaaagcattgtcgccctaattatacctaatattt 26209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 49791155 - 49791079
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  49791155 cctaatattt-tagcaacttttccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 49791532 - 49791456
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  49791532 cctaatattt-tagcaacttttccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 49791056 - 49791022
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  49791056 atatttcctaattcccctcctccaaaccctaacca 49791022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 49791433 - 49791399
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  49791433 atatttcctaattcccctcctccaaaccctaacca 49791399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 2052293 - 2052217
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| | ||||||||||||||||||||||| |||||||    
T  2052293 taaacaaagctttgttgccctaattttaaccttatattt-tagcaacttttccctccttcaaaacctaaccatatttc 2052217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 2051752 - 2051720
Alignment:
Q  123 atttcctaattcccctcctccaaaccctaacca 155  Q
    ||||| |||||||||||||||||||||||||||    
T  2051752 atttcataattcccctcctccaaaccctaacca 2051720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 36871012 - 36870980
Alignment:
Q  123 atttcctaattcccctcctccaaaccctaacca 155  Q
    ||||| |||||||||||||||||||||||||||    
T  36871012 atttcataattcccctcctccaaaccctaacca 36870980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 7e-42; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 29374373 - 29374212
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  29374373 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaaccatatttcctaattcccctcc 29374275  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||  | |||||| ||| |||||||||||| ||||||||||||| |||||    
T  29374274 tccaaaccctaaccatcgtttcctaacttcactcctcctaaaacctatctaattgatttccat 29374212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 3589246 - 3589353
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatc 188  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  3589246 tagccatttttccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaatctatc 3589345  T
Q  189 taattgat 196  Q
    ||||||||    
T  3589346 taattgat 3589353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 29371821 - 29371660
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | | ||||||||||||||||| ||||| ||||||||||||||||||||    
T  29371821 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-taacaacttttccctccttcaaaatctaaccatatttcctaattcccctcc 29371723  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||    
T  29371722 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 29371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 33049857 - 33049694
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  33049857 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 33049759  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    |||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||| |||||    
T  33049758 cctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccat 33049694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 2271841 - 2271959
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  2271841 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 2271939  T
Q  178 ctaaaa-ctatctaattgat 196  Q
    |||||| |||||||||||||    
T  2271940 ctaaaacctatctaattgat 2271959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 24456418 - 24456542
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||| ||| ||||||    
T  24456418 acctaatattt-tagcaaattttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaacttcactcctc 24456516  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  24456517 ctaaaacctatctaattgatttccat 24456542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 33007419 - 33007265
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacct-aatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| |||||||||   ||| ||||||||| || || ||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  33007419 tcttattcctaaacaaagttttgttgccctaattttaacttaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 33007321  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    | ||||||||| ||||||| |||||| ||  |||||||||||| |||||||||||||    
T  33007320 t-caaaccctagccatgatttcctaacttaactcctcctaaaacctatctaattgat 33007265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 29921016 - 29921092
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||| |||||||  ||||||||| |||||||||||||| |||||||||||||||||||||    
T  29921016 cctaatattt-tagcaactttttcctcctttgaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 29921092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 36076 - 36194
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  36076 ttgtagccacttttccctccttcaaaacctaaccatatttcctaattcccatcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 36175  T
Q  186 atctaattgatgtccatct 204  Q
    |  |||||||| |||||||    
T  36176 acttaattgatttccatct 36194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 36225 - 36334
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||| ||| |||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||    
T  36225 ttgtacccacttttccctcctttaaaacctaaccatatttcctaattcccctcctccaaa-cctaaccatgatttcctaatttccctcctcctaaaacct 36323  T
Q  186 atctaattgat 196  Q
    | |||||||||    
T  36324 acctaattgat 36334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 36373 - 36445
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  36373 ttgtagccacttttccctccttcaaaacctaaccatatatcctaattcccctcctccaaaccctaaccatgat 36445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 83; Significance: 2e-39; HSPs: 5)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 41187 - 41281
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41187 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 40777 - 40938
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  40777 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcc 40875  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtccat 202  Q
    ||||||||||||||||||| |||||| | | |||||||||||| ||||||||||||| |||||    
T  40876 tccaaaccctaaccatgatttcctaactccactcctcctaaaacctatctaattgatttccat 40938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 41380 - 41482
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatgtc 199  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||    
T  41380 ccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatgatttcctaatttccatcctcctaaaacctatctaattgatttc 41479  T
Q  200 cat 202  Q
    |||    
T  41480 cat 41482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 41289 - 41372
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41289 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 41047 - 41115
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  41047 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 41115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 74; Significance: 4e-34; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 44731 - 44607
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  44731 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 44633  T
Q  178 ctaaaa-ctatctaattgatgtccat 202  Q
    |||||| ||||||||||||| |||||    
T  44632 ctaaaacctatctaattgatttccat 44607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 48739 - 48828
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaa 131  Q
    |||||||| |||||||||   ||| ||||||||| || |||||||||| |||| |||||||||| |||||||||||||| |||||||||||    
T  48739 tcttattcctaaacaaagttttgttgccctaattttaacctaatattt-tagcaatttttcccttcttcaaaacctaaccatatttcctaa 48828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 51585 - 51517
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  51585 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 51517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1113 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 2557 - 2451
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| || ||||||||| ||||||||||||    
T  2557 ttttccctccttcaaaacctaaccatatttcctaattcccctcctctaaaccctaaccatgatttcctaacttcacttctcctaaaacctatctaattga 2458  T
Q  196 tgtccat 202  Q
    | |||||    
T  2457 tttccat 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 293 - 369
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  293 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 392 - 426
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  392 atatttcctaattcccctcctccaaaccctaacca 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 183 - 107
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||    
T  183 cctaatattt-tagcaacttttccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 84 - 50
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  84 atatttcctaattcccctcctccaaaccctaacca 50  T

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Target: scaffold0345 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 10204 - 10280
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  10204 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 10280  T

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Target: scaffold0345; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 10303 - 10337
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  10303 atatttcctaattcccctcctccaaaccctaacca 10337  T

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Target: scaffold0105 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 28776 - 28700
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  28776 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 28700  T

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Target: scaffold0105; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 28677 - 28643
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  28677 atatttcctaattcccctcctccaaaccctaacca 28643  T

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Target: scaffold0119 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 29292 - 29248
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| |||||||||  |||||||||||    
T  29292 ttattcttaaacaaagcactgttgccctaattccacctaatattt 29248  T

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Target: scaffold0119; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 35545 - 35501
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| |||||||||  |||||||||||    
T  35545 ttattcttaaacaaagcactgttgccctaattccacctaatattt 35501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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