View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10392_high_17 (Length: 243)
Name: NF10392_high_17
Description: NF10392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10392_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 37800507 - 37800737
Alignment:
| Q |
1 |
tttcctttcgattttccaaccggtcaagtcaactaaacaaacaacatccattcggctttccattgccatatacgcttata-------catttatcttaag |
93 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
37800507 |
tttcctttcgattttccaaccggtcaagtcaactaaacaaacaacatccattcggctttccattgccatatacgcttatatattatacatttatcttaat |
37800606 |
T |
|
| Q |
94 |
aaatgcggggaaaaatttgttctaaaaaataatctgtagaaatgtctatttctcatttatctttggtgtgtctagcatccaaaaacaattaacatttaag |
193 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37800607 |
aaatgcgggaaaaaatttgttctaaaaaataatctgtagaaatgtc-atttcttatttatctttggtgtgtctagcatccaaaaacaattaatatttaag |
37800705 |
T |
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| Q |
194 |
atatttaatcatttaaatttattactataatc |
225 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
37800706 |
atatttaatcatttaaatttattactataatc |
37800737 |
T |
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