View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10392_low_2 (Length: 711)

Name: NF10392_low_2
Description: NF10392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10392_low_2
NF10392_low_2
[»] chr7 (26 HSPs)
chr7 (247-711)||(5835268-5835730)
chr7 (60-255)||(5835961-5836155)
chr7 (658-711)||(27093398-27093451)
chr7 (658-711)||(27184850-27184903)
chr7 (669-711)||(18213029-18213071)
chr7 (658-711)||(15680830-15680883)
chr7 (671-711)||(640134-640174)
chr7 (675-711)||(15902843-15902879)
chr7 (644-711)||(32287434-32287501)
chr7 (669-711)||(3721114-3721156)
chr7 (669-711)||(38143244-38143286)
chr7 (626-711)||(598229-598314)
chr7 (674-711)||(7328692-7328729)
chr7 (664-705)||(22484052-22484093)
chr7 (674-711)||(22602711-22602748)
chr7 (675-711)||(41020517-41020553)
chr7 (676-711)||(2948704-2948739)
chr7 (669-711)||(11061072-11061114)
chr7 (669-711)||(20549812-20549854)
chr7 (669-711)||(39138465-39138507)
chr7 (674-711)||(1433475-1433512)
chr7 (674-711)||(2334271-2334308)
chr7 (674-711)||(9408335-9408372)
chr7 (674-711)||(9482955-9482992)
chr7 (674-711)||(16341517-16341554)
chr7 (674-711)||(27229312-27229349)
[»] chr5 (18 HSPs)
chr5 (626-711)||(43564902-43564987)
chr5 (659-711)||(12927675-12927727)
chr5 (664-711)||(16203786-16203833)
chr5 (673-707)||(14873542-14873576)
chr5 (674-711)||(36838564-36838601)
chr5 (635-711)||(28588636-28588712)
chr5 (674-705)||(11685966-11685997)
chr5 (680-711)||(27144484-27144515)
chr5 (664-711)||(30502379-30502426)
chr5 (664-711)||(30542722-30542769)
chr5 (645-711)||(23012380-23012446)
chr5 (669-711)||(33178046-33178088)
chr5 (677-711)||(39758293-39758327)
chr5 (674-711)||(3966524-3966561)
chr5 (674-711)||(6471890-6471927)
chr5 (626-711)||(21576698-21576783)
chr5 (625-710)||(30098990-30099075)
chr5 (674-711)||(41091258-41091295)
[»] chr6 (25 HSPs)
chr6 (658-709)||(32298592-32298643)
chr6 (626-711)||(7378000-7378085)
chr6 (675-711)||(7086816-7086852)
chr6 (655-711)||(9658900-9658956)
chr6 (655-711)||(33001271-33001327)
chr6 (644-711)||(34595155-34595222)
chr6 (669-711)||(5732506-5732548)
chr6 (669-711)||(7265589-7265631)
chr6 (669-711)||(13360368-13360410)
chr6 (674-711)||(7027263-7027300)
chr6 (674-711)||(9025495-9025532)
chr6 (674-711)||(9195755-9195792)
chr6 (658-711)||(17841574-17841627)
chr6 (675-711)||(26178683-26178719)
chr6 (664-711)||(19040373-19040420)
chr6 (612-711)||(28152119-28152218)
chr6 (613-711)||(853799-853897)
chr6 (669-711)||(7938137-7938179)
chr6 (649-711)||(32511642-32511704)
chr6 (674-711)||(7151433-7151470)
chr6 (674-711)||(9617455-9617492)
chr6 (674-711)||(9629404-9629441)
chr6 (674-711)||(17327656-17327693)
chr6 (674-711)||(26562710-26562747)
chr6 (626-707)||(32978852-32978933)
[»] chr8 (25 HSPs)
chr8 (633-707)||(33405344-33405418)
chr8 (659-711)||(4786324-4786376)
chr8 (669-711)||(13844592-13844634)
chr8 (626-711)||(3025572-3025657)
chr8 (664-709)||(8293848-8293893)
chr8 (674-711)||(8847277-8847314)
chr8 (674-711)||(11927087-11927124)
chr8 (658-711)||(14134720-14134773)
chr8 (674-711)||(15816130-15816167)
chr8 (674-711)||(26902176-26902213)
chr8 (655-711)||(3951518-3951574)
chr8 (655-711)||(43737793-43737849)
chr8 (644-711)||(20873090-20873157)
chr8 (676-711)||(39954282-39954317)
chr8 (669-711)||(12606825-12606867)
chr8 (681-711)||(14731733-14731763)
chr8 (673-711)||(28384994-28385032)
chr8 (677-711)||(34222968-34223002)
chr8 (669-711)||(34897106-34897148)
chr8 (626-695)||(126300-126369)
chr8 (674-711)||(2572057-2572094)
chr8 (674-711)||(7472516-7472553)
chr8 (674-711)||(8342993-8343030)
chr8 (674-711)||(11944686-11944723)
chr8 (670-711)||(20679392-20679433)
[»] chr4 (24 HSPs)
chr4 (625-711)||(12895226-12895312)
chr4 (628-711)||(36509047-36509130)
chr4 (626-711)||(35157938-35158023)
chr4 (644-711)||(30103328-30103394)
chr4 (673-711)||(5775358-5775396)
chr4 (669-711)||(33950157-33950199)
chr4 (658-711)||(9996861-9996914)
chr4 (674-711)||(10499271-10499308)
chr4 (674-711)||(13134471-13134508)
chr4 (674-711)||(46083992-46084029)
chr4 (658-711)||(54580008-54580061)
chr4 (664-711)||(40179627-40179674)
chr4 (673-711)||(7214522-7214560)
chr4 (673-711)||(11931301-11931339)
chr4 (677-711)||(17344521-17344555)
chr4 (674-708)||(36409513-36409547)
chr4 (674-708)||(36423679-36423713)
chr4 (626-711)||(8423671-8423756)
chr4 (663-704)||(16066555-16066596)
chr4 (669-702)||(20950423-20950456)
chr4 (674-711)||(22234891-22234928)
chr4 (626-711)||(23292939-23293024)
chr4 (678-711)||(40613471-40613504)
chr4 (658-711)||(49431047-49431100)
[»] chr3 (20 HSPs)
chr3 (626-711)||(35222959-35223044)
chr3 (626-711)||(40993288-40993373)
chr3 (664-711)||(8842350-8842397)
chr3 (669-711)||(7928471-7928513)
chr3 (669-711)||(49505150-49505192)
chr3 (674-711)||(11665965-11666002)
chr3 (674-711)||(15314877-15314914)
chr3 (658-711)||(55401096-55401149)
chr3 (655-711)||(2941579-2941635)
chr3 (664-711)||(8789541-8789588)
chr3 (680-711)||(32804547-32804578)
chr3 (669-711)||(10268482-10268524)
chr3 (681-711)||(11313808-11313838)
chr3 (669-711)||(20691340-20691382)
chr3 (669-711)||(25093523-25093565)
chr3 (673-711)||(48202269-48202307)
chr3 (674-711)||(1509560-1509597)
chr3 (612-709)||(23657762-23657859)
chr3 (674-711)||(28678324-28678361)
chr3 (674-711)||(38731239-38731276)
[»] chr1 (34 HSPs)
chr1 (626-711)||(2896074-2896159)
chr1 (625-711)||(29163333-29163419)
chr1 (658-711)||(5898251-5898304)
chr1 (659-711)||(30749861-30749913)
chr1 (659-711)||(30771312-30771364)
chr1 (669-711)||(2784577-2784619)
chr1 (669-711)||(14332638-14332680)
chr1 (669-711)||(39953142-39953184)
chr1 (674-711)||(25272503-25272540)
chr1 (674-711)||(34371734-34371771)
chr1 (674-711)||(44482251-44482288)
chr1 (675-711)||(1864882-1864918)
chr1 (675-711)||(13997904-13997940)
chr1 (664-711)||(7353484-7353531)
chr1 (664-711)||(22515878-22515925)
chr1 (664-711)||(22881607-22881654)
chr1 (669-704)||(39130763-39130798)
chr1 (664-711)||(40258924-40258971)
chr1 (669-711)||(13436479-13436521)
chr1 (669-711)||(23636045-23636087)
chr1 (677-711)||(34257914-34257948)
chr1 (669-711)||(36878482-36878524)
chr1 (669-711)||(40181892-40181934)
chr1 (669-711)||(52903270-52903312)
chr1 (674-711)||(1486710-1486747)
chr1 (674-711)||(5944304-5944341)
chr1 (674-711)||(7918212-7918249)
chr1 (674-711)||(9828065-9828102)
chr1 (625-710)||(12918967-12919052)
chr1 (674-711)||(20157351-20157388)
chr1 (674-711)||(25361907-25361944)
chr1 (674-711)||(34712384-34712421)
chr1 (626-711)||(42359402-42359487)
chr1 (658-711)||(46348368-46348421)
[»] chr2 (16 HSPs)
chr2 (674-711)||(34784983-34785020)
chr2 (655-711)||(20242709-20242765)
chr2 (664-711)||(5367213-5367260)
chr2 (669-711)||(20922924-20922966)
chr2 (657-711)||(40361738-40361792)
chr2 (677-711)||(30527599-30527633)
chr2 (669-711)||(31018611-31018653)
chr2 (669-711)||(34691801-34691843)
chr2 (669-711)||(34714213-34714255)
chr2 (673-711)||(38355887-38355925)
chr2 (626-711)||(2438672-2438757)
chr2 (682-711)||(2665897-2665926)
chr2 (658-711)||(5040755-5040808)
chr2 (674-711)||(18889592-18889629)
chr2 (626-711)||(37558998-37559083)
chr2 (674-711)||(44860341-44860378)
[»] scaffold0044 (1 HSPs)
scaffold0044 (626-684)||(53239-53297)
[»] scaffold0236 (1 HSPs)
scaffold0236 (674-711)||(25769-25806)
[»] scaffold0279 (1 HSPs)
scaffold0279 (658-696)||(17806-17844)
[»] scaffold0123 (1 HSPs)
scaffold0123 (677-711)||(44529-44563)
[»] scaffold0171 (1 HSPs)
scaffold0171 (674-711)||(23441-23478)
[»] scaffold0050 (1 HSPs)
scaffold0050 (658-711)||(70299-70352)
[»] scaffold0036 (1 HSPs)
scaffold0036 (674-711)||(9748-9785)
[»] scaffold0020 (1 HSPs)
scaffold0020 (674-711)||(135313-135350)
[»] scaffold0011 (1 HSPs)
scaffold0011 (674-711)||(17750-17787)
[»] scaffold0003 (1 HSPs)
scaffold0003 (674-711)||(241615-241652)


Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 247 - 711
Target Start/End: Complemental strand, 5835730 - 5835268
Alignment:
Q  247 tactttataatatcaaactcttactactaaactggacaaatctgnnnnnnnnnnnnaacggcaaaatttattaataatcaaatcagtgcacaattgacaa 346  Q
    |||||||||||||||||||||||||||||||||| |||||||||            | ||||||||||||||||||| ||| |||||||| |||| ||||    
T  5835730 tactttataatatcaaactcttactactaaactgaacaaatctgtttttttttt--atcggcaaaatttattaataaccaagtcagtgcataatttacaa 5835633  T
Q  347 atctgtatttgatgttgatacttttgtgaatttgaatttgatatactttgtggtatatatcttttgaaatagcaatttctt-ggtcttccacatgactga 445  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  5835632 atctgtatttgatgttcatacttttgtgaatttgaatttgatatgctttgtggtatatatcttttgaaatagcaatttctttggccttccacatgactga 5835533  T
Q  446 catactatttttgccatagttggactcaaaagttgttaatttgcattaggactgatttatctctacataatctgtttcctagactagattgtttgccatt 545  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5835532 catactattttcgccatagttggactcaaaagttgttaatttgcatttggactgatttatctctacataatctgtttcatagactagattgtttgccatt 5835433  T
Q  546 ttcaacaatttaataaaaacatggtgnnnnnnnnnaattctttttgcaaattgtaaactccgtttaactatgaagtaaaaacacttcttggattaaccgt 645  Q
    |||||||||||||||||||||||||          |||||||||||||| || |||||||||||||||||| ||| |||||||||||| ||||||| |||    
T  5835432 ttcaacaatttaataaaaacatggt-atttcttttaattctttttgcaacttttaaactccgtttaactataaagcaaaaacacttctcggattaagcgt 5835334  T
Q  646 gtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  5835333 gtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattt 5835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 60 - 255
Target Start/End: Complemental strand, 5836155 - 5835961
Alignment:
Q  60 gaaagggttgaaattggtggcactagttgaaaattcatttatgtaaatctcaaattaatccaattcaagatattgagcctcttgaattggtaccgaggaa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  5836155 gaaagggttgaaattggtggcactagttgaaaattcatttatgtaaatctcaaattaatccaattcaagatcttgagcctcatgaattggtactgaggaa 5836056  T
Q  160 gggagaaattattattacttaaaagtgaaaataatggtcattttacaactgtctccgacgatatttaaaatttgtccttttacattatactttata 255  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  5836055 gggagaaattattattactt-aaagtgaaagtaattgtcattttacaactgtctccgacaatatttaaaatttgtccttttagattatactttata 5835961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 711
Target Start/End: Original strand, 27093398 - 27093451
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  27093398 gacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattt 27093451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 711
Target Start/End: Complemental strand, 27184903 - 27184850
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  27184903 gacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattt 27184850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 18213029 - 18213071
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  18213029 tgtccgacaccgacacatataattacactaaattatgtgattt 18213071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 711
Target Start/End: Complemental strand, 15680883 - 15680830
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  15680883 gacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattt 15680830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 671 - 711
Target Start/End: Complemental strand, 640174 - 640134
Alignment:
Q  671 tctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  640174 tctgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 711
Target Start/End: Complemental strand, 15902879 - 15902843
Alignment:
Q  675 acaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||||||||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattt 15902843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 711
Target Start/End: Original strand, 32287434 - 32287501
Alignment:
Q  644 gtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| | || ||||| ||||||||| |||||||||||||||| || |||| |||||||||||||    
T  32287434 gtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattt 32287501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 3721156 - 3721114
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  3721156 tgtccgacaccgacacatataattatactaaattatgtgattt 3721114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 38143286 - 38143244
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  38143286 tgtctgacaccaacacatataattacattaaattatgtgattt 38143244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 711
Target Start/End: Complemental strand, 598314 - 598229
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| ||||||  ||||||||| | || ||||| |||| |||||||||||||||| || ||||||| | ||||| |||||||    
T  598314 acacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattt 598229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 7328692 - 7328729
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7328692 gacaccgacacatataattacactaaattatgttattt 7328729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 705
Target Start/End: Complemental strand, 22484093 - 22484052
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatg 705  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  22484093 tgtcatgtctgacaccgacacatataattatactgaattatg 22484052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 22602711 - 22602748
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||||||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattt 22602748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 711
Target Start/End: Complemental strand, 41020553 - 41020517
Alignment:
Q  675 acaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| ||||||||||||||||||||||||||||    
T  41020553 acaccgacgcatataattacactaaattatgtgattt 41020517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 711
Target Start/End: Complemental strand, 2948739 - 2948704
Alignment:
Q  676 caccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||||||| |||||||    
T  2948739 caccgacacatataattacactaaattacgtgattt 2948704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 11061072 - 11061114
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||| | |||||| |||||||||||||||||    
T  11061072 tgtctgacaccgacacttgtaattatactaaattatgtgattt 11061114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 20549854 - 20549812
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||||||| ||||| |||||||    
T  20549854 tgtccgacaccgacacatataattacactgaattacgtgattt 20549812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 39138507 - 39138465
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||| ||||||||||||| |||||||||||||    
T  39138507 tgtccgacaccgacatatataattacactgaattatgtgattt 39138465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 1433512 - 1433475
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  1433512 gacaccgacacatataattacaccaaatgatgtgattt 1433475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 2334308 - 2334271
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  2334308 gacaccgacacttgtaattacactaaattatgtgattt 2334271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 9408335 - 9408372
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  9408335 gacaccgacacttgtaattacactaaattatgtgattt 9408372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 9482992 - 9482955
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattt 9482955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 16341554 - 16341517
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  16341554 gacaccggcacatataattacacttaattatgtgattt 16341517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 27229312 - 27229349
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| || ||||||||||||||||||||||||||    
T  27229312 gacaccgatacttataattacactaaattatgtgattt 27229349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 626 - 711
Target Start/End: Complemental strand, 43564987 - 43564902
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| ||||||  |||||||||   || |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  43564987 acacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgattt 43564902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 711
Target Start/End: Complemental strand, 12927727 - 12927675
Alignment:
Q  659 acacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||| ||||||    
T  12927727 acacgtgtcatgtctgacactgacatatataattacactaaattatatgattt 12927675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 664 - 711
Target Start/End: Original strand, 16203786 - 16203833
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| |||||||||||||||||||||||||||||||| |||||    
T  16203786 tgtcttgtccgacaccgacacatataattacactaaattatgagattt 16203833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 707
Target Start/End: Complemental strand, 14873576 - 14873542
Alignment:
Q  673 tgacaccgacacatataattacactaaattatgtg 707  Q
    |||||||||||||||||||||||||||||||||||    
T  14873576 tgacaccgacacatataattacactaaattatgtg 14873542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 36838601 - 36838564
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattt 36838564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 635 - 711
Target Start/End: Original strand, 28588636 - 28588712
Alignment:
Q  635 ggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||| ||||||| | | ||||| |  |||| |||| ||||||||||| |||||||||||| |||||||||||||    
T  28588636 ggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattt 28588712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 674 - 705
Target Start/End: Complemental strand, 11685997 - 11685966
Alignment:
Q  674 gacaccgacacatataattacactaaattatg 705  Q
    ||||||||||||||||||||||||||||||||    
T  11685997 gacaccgacacatataattacactaaattatg 11685966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 711
Target Start/End: Complemental strand, 27144515 - 27144484
Alignment:
Q  680 gacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||||||||    
T  27144515 gacacatataattacactaaattatgtgattt 27144484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 711
Target Start/End: Original strand, 30502379 - 30502426
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| |||||||||||||||||||||||| ||||| |||||||    
T  30502379 tgtcgtgtccgacaccgacacatataattacactgaattaagtgattt 30502426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 711
Target Start/End: Original strand, 30542722 - 30542769
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| |||||||||||||||||||||||| ||||| |||||||    
T  30542722 tgtcgtgtccgacaccgacacatataattacactgaattaagtgattt 30542769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 645 - 711
Target Start/End: Original strand, 23012380 - 23012446
Alignment:
Q  645 tgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||| | |||||||  |||| ||||  ||||||||||||||||||||| |||||||| ||||||    
T  23012380 tgtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattt 23012446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 33178088 - 33178046
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  33178088 tgtccgacaccgacacttgtaattacactaaattatgtgattt 33178046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 677 - 711
Target Start/End: Complemental strand, 39758327 - 39758293
Alignment:
Q  677 accgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||| |||||||||||||    
T  39758327 accgacacatataattacactgaattatgtgattt 39758293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 3966561 - 3966524
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattt 3966524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 6471890 - 6471927
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  6471890 gacacccacacatataattacactgaattatgtgattt 6471927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 711
Target Start/End: Original strand, 21576698 - 21576783
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| || ||||||  ||||||||  | |||||||| |||| |||| |||| |||||| | |||||||||| |||||||||||||    
T  21576698 acactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattt 21576783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 710
Target Start/End: Original strand, 30098990 - 30099075
Alignment:
Q  625 aacacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgatt 710  Q
    |||||| ||||||| |  ||||||||  | |||||||| |||| | || |||||||||||||||||||||||  ||||||| ||||    
T  30098990 aacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatgcgatt 30099075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 41091258 - 41091295
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  41091258 gacatcgacacatataattacactgaattatgtgattt 41091295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 658 - 709
Target Start/End: Original strand, 32298592 - 32298643
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgat 709  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  32298592 gacatatgtcatgtctgacaccaacacatataattacactaaattatgtgat 32298643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 626 - 711
Target Start/End: Complemental strand, 7378085 - 7378000
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||  ||||| |||||||||| | || ||  |||||| |||| |||||||||||||||||||||| | |||||||||||||    
T  7378085 acacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgattt 7378000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 711
Target Start/End: Complemental strand, 7086852 - 7086816
Alignment:
Q  675 acaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattt 7086816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 711
Target Start/End: Complemental strand, 9658956 - 9658900
Alignment:
Q  655 tcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| |||| ||||| ||||||||| ||||||||||||| |||||||||||||    
T  9658956 tcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattt 9658900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 711
Target Start/End: Original strand, 33001271 - 33001327
Alignment:
Q  655 tcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| |||| |||| |||||||||||||||||||||| | |||||||||||||    
T  33001271 tcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattt 33001327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 711
Target Start/End: Complemental strand, 34595222 - 34595155
Alignment:
Q  644 gtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| | |||||||| |||| |||| ||||||||||| | |||||||||| |||||||||||||    
T  34595222 gtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 34595155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 5732506 - 5732548
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  5732506 tgtccgacaccgacacatataattacactaaaatatgtgattt 5732548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 7265589 - 7265631
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  7265589 tgtccgacaccgacacatataattacactgaattatgtgattt 7265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 13360368 - 13360410
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  13360368 tgtctgacaccgaaacatataattacactgaattatgtgattt 13360410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 7027300 - 7027263
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7027300 gacaccgacacatataattacactgaattatgtgattt 7027263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 9025495 - 9025532
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattt 9025532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 9195755 - 9195792
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattt 9195792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 711
Target Start/End: Original strand, 17841574 - 17841627
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||| |||| ||||||| ||| | ||||||||||||||||||||||||    
T  17841574 gacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattt 17841627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 711
Target Start/End: Original strand, 26178683 - 26178719
Alignment:
Q  675 acaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattt 26178719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 711
Target Start/End: Complemental strand, 19040420 - 19040373
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  19040420 tgtcgtgtccgacacagacacatataattacactgaattatgtgattt 19040373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 711
Target Start/End: Complemental strand, 28152218 - 28152119
Alignment:
Q  612 actatgaagtaaaaacacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||| |  |||||| || ||||||  | ||||||| | || ||||| |||| |||| ||||||||||| | |||||||||| |||||||||||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 28152119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 613 - 711
Target Start/End: Original strand, 853799 - 853897
Alignment:
Q  613 ctatgaagtaaaaacacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||| |||||  ||||||||  |||||| | || || |||||||||| | || ||||||||||| | ||||| |||| |||||||||||||    
T  853799 ctataaagtaaagacactcattggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattt 853897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 7938179 - 7938137
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||    
T  7938179 tgtcggacaccgacacttataattacactaaattatatgattt 7938137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 649 - 711
Target Start/End: Original strand, 32511642 - 32511704
Alignment:
Q  649 ccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| ||||||| ||||| | || |||||| |||| |||||||||||| |||||||||||||    
T  32511642 ccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattt 32511704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 7151470 - 7151433
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  7151470 gacaccaacacatataattacacttaattatgtgattt 7151433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 9617492 - 9617455
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||| | |||||||||||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattt 9617455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 9629441 - 9629404
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||| | |||||||||||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattt 9629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 17327656 - 17327693
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  17327656 gacactgacacatatagttacactaaattatgtgattt 17327693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 26562747 - 26562710
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  26562747 gacatcgacacatataattacactgaattatgtgattt 26562710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 707
Target Start/End: Original strand, 32978852 - 32978933
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtg 707  Q
    ||||| |||||||||  ||||||||| | || ||||  |||| |||| ||||||||||| | |||||||||| |||||||||    
T  32978852 acactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtg 32978933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 633 - 707
Target Start/End: Original strand, 33405344 - 33405418
Alignment:
Q  633 ttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtg 707  Q
    |||||||| |||||||| | | |||||||  |||| |||| ||||||||||||||||||||||||||||||||||    
T  33405344 ttggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtg 33405418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 711
Target Start/End: Original strand, 4786324 - 4786376
Alignment:
Q  659 acacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||| | || |||||||||||||||||||||||| |||||||||||||    
T  4786324 acacatgtcgtatccgacaccgacacatataattacactgaattatgtgattt 4786376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 13844592 - 13844634
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  13844592 tgtccgacaccgacacatataattacactcaattatgtgattt 13844634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 711
Target Start/End: Complemental strand, 3025657 - 3025572
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| || |||||| ||||||| |  | |||||||| |||| |||| ||||| ||||| |||||||||||| |||||||||||||    
T  3025657 acactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattt 3025572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 709
Target Start/End: Complemental strand, 8293893 - 8293848
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgat 709  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||    
T  8293893 tgtcatgtttgacaccgacacatataattacactgaattacgtgat 8293848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 8847314 - 8847277
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||||||||||||    
T  8847314 gacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 11927087 - 11927124
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11927087 gacaccgacacatataattacactgaattatgtgattt 11927124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 711
Target Start/End: Complemental strand, 14134773 - 14134720
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||| ||| ||||||||||| ||||||||||||| |||||||||||||    
T  14134773 gacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattt 14134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 15816130 - 15816167
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  15816130 gacaccgacacttataattacactaaattatgtgattt 15816167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 26902176 - 26902213
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||||||||||||    
T  26902176 gacaccgacacatataattacactgaattatgtgattt 26902213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 711
Target Start/End: Original strand, 3951518 - 3951574
Alignment:
Q  655 tcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| |||| |||||||||||||||||||||| ||||||  ||| ||||||||    
T  3951518 tcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtgattt 3951574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 711
Target Start/End: Original strand, 43737793 - 43737849
Alignment:
Q  655 tcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| |||| |||| ||||||||||||||||||||||||  ||| ||||||||    
T  43737793 tcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgattt 43737849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 711
Target Start/End: Complemental strand, 20873157 - 20873090
Alignment:
Q  644 gtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| || |||| ||||| | || |||| ||||||||||| | ||||||||||||||||||||||||    
T  20873157 gtgtctcggtatcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 20873090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 711
Target Start/End: Original strand, 39954282 - 39954317
Alignment:
Q  676 caccgacacatataattacactaaattatgtgattt 711  Q
    ||||| ||||||||||||||||||||||||||||||    
T  39954282 caccgtcacatataattacactaaattatgtgattt 39954317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 12606825 - 12606867
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||| | |||||| ||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattt 12606867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 681 - 711
Target Start/End: Complemental strand, 14731763 - 14731733
Alignment:
Q  681 acacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattt 14731733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 673 - 711
Target Start/End: Original strand, 28384994 - 28385032
Alignment:
Q  673 tgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  28384994 tgacaccgacacatataattacactgaattatgagattt 28385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 677 - 711
Target Start/End: Complemental strand, 34223002 - 34222968
Alignment:
Q  677 accgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||| |||||||||||||    
T  34223002 accgacacatataattacacttaattatgtgattt 34222968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 34897148 - 34897106
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| ||||||||||||||||||| |||||||||||||    
T  34897148 tgtccgacatcgacacatataattacactgaattatgtgattt 34897106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 695
Target Start/End: Original strand, 126300 - 126369
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattaca 695  Q
    ||||| || |||||| |||||||||| |||  ||||| |||| |||| ||||| ||||||||||||||||    
T  126300 acactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 2572057 - 2572094
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  2572057 gacaccgacacttgtaattacactaaattatgtgattt 2572094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 7472516 - 7472553
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  7472516 gacacagacacatataattacactaatttatgtgattt 7472553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 8343030 - 8342993
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  8343030 gacaccgacacttgtaattacactaaattatgtgattt 8342993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 11944723 - 11944686
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| | |||||||||||    
T  11944723 gacaccgacacatataattacactgagttatgtgattt 11944686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 711
Target Start/End: Original strand, 20679392 - 20679433
Alignment:
Q  670 gtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||| |||||||||||| || ||||||||||    
T  20679392 gtctgacaccgacacttataattacactgaactatgtgattt 20679433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 711
Target Start/End: Original strand, 12895226 - 12895312
Alignment:
Q  625 aacacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||| || ||||||  ||||||||||| || || ||||||| |||| ||||||||||| ||||||||||| ||||||||||||||    
T  12895226 aacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattt 12895312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 711
Target Start/End: Original strand, 36509047 - 36509130
Alignment:
Q  628 acttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||| ||||||| ||||||| | |||||||||| ||||  ||| ||| ||||||||||||||||||||  ||||||||||||    
T  36509047 acttctcggattaaacgtgtcctggtatcagacacgtgtcgcgtccgacgccgacacatataattacacttgattatgtgattt 36509130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 626 - 711
Target Start/End: Original strand, 35157938 - 35158023
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| ||||||| ||||| ||| | |  ||||  |||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  35157938 acacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgattt 35158023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 711
Target Start/End: Original strand, 30103328 - 30103394
Alignment:
Q  644 gtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||| ||| ||||||| ||||| ||| |||||||||||||||| |||||||| |||||||||||||    
T  30103328 gtgtcctgatgtcagacatatgtcgtgtttgacaccgacacatatgattacact-aattatgtgattt 30103394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 711
Target Start/End: Original strand, 5775358 - 5775396
Alignment:
Q  673 tgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  5775358 tgacaccgacacatataattacacttaattatgtgattt 5775396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 33950199 - 33950157
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  33950199 tgtctgacaccgacacatatgattacattaaattatgtgattt 33950157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 711
Target Start/End: Complemental strand, 9996914 - 9996861
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| ||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  9996914 gacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattt 9996861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 10499271 - 10499308
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  10499271 gacactgacacatataattacactaaattatgtgattt 10499308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 13134508 - 13134471
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||||||||||||||||    
T  13134508 gacatcgacacatataattacactaaattatgtgattt 13134471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 46083992 - 46084029
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  46083992 gacaccgacacatataattacactagattatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 711
Target Start/End: Original strand, 54580008 - 54580061
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||| |||| ||||||||||| |||||||||||| |||||||||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattt 54580061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 711
Target Start/End: Original strand, 40179627 - 40179674
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| ||||||||| |||||||||||||| |||||||||||||    
T  40179627 tgtcgtgtccgacaccgacgcatataattacactgaattatgtgattt 40179674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 673 - 711
Target Start/End: Original strand, 7214522 - 7214560
Alignment:
Q  673 tgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  7214522 tgacaccgacgcatataattacattaaattatgtgattt 7214560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 673 - 711
Target Start/End: Complemental strand, 11931339 - 11931301
Alignment:
Q  673 tgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  11931339 tgacatcgacacatatatttacactaaattatgtgattt 11931301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 677 - 711
Target Start/End: Complemental strand, 17344555 - 17344521
Alignment:
Q  677 accgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||| |||||||||||||||    
T  17344555 accgacacatataattacattaaattatgtgattt 17344521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 674 - 708
Target Start/End: Original strand, 36409513 - 36409547
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtga 708  Q
    ||||||||||| |||||||||||||||||||||||    
T  36409513 gacaccgacacctataattacactaaattatgtga 36409547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 674 - 708
Target Start/End: Original strand, 36423679 - 36423713
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtga 708  Q
    ||||||||||| |||||||||||||||||||||||    
T  36423679 gacaccgacacctataattacactaaattatgtga 36423713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 711
Target Start/End: Original strand, 8423671 - 8423756
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||  |||||  ||||||||| | || ||||  |||| |||| ||||||||||  |||||||||||| |||||||||||||    
T  8423671 acacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattt 8423756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 663 - 704
Target Start/End: Original strand, 16066555 - 16066596
Alignment:
Q  663 atgtcatgtctgacaccgacacatataattacactaaattat 704  Q
    ||||||||||||||| ||||||||||||||||| | ||||||    
T  16066555 atgtcatgtctgacatcgacacatataattacattgaattat 16066596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 702
Target Start/End: Original strand, 20950423 - 20950456
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaatt 702  Q
    ||||||||||||||||||||||||||||| ||||    
T  20950423 tgtctgacaccgacacatataattacactgaatt 20950456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 22234891 - 22234928
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  22234891 gacaccgacacatagaattacactgaattatgtgattt 22234928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 711
Target Start/End: Original strand, 23292939 - 23293024
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| || ||||||  ||||||||| | || ||||| |||| |||| ||||||||||| | |||||| ||| |||||||||||||    
T  23292939 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattt 23293024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 678 - 711
Target Start/End: Complemental strand, 40613504 - 40613471
Alignment:
Q  678 ccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||| |||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattt 40613471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 711
Target Start/End: Complemental strand, 49431100 - 49431047
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||| |||| ||||||||||| | |||||||||| |||||||||||||    
T  49431100 gacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgattt 49431047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 711
Target Start/End: Complemental strand, 35223044 - 35222959
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| || |||| || ||||||||  | |||||||| ||||||||| |||||||||||||||||||||| | |||||||||||||    
T  35223044 acactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattt 35222959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 626 - 711
Target Start/End: Original strand, 40993288 - 40993373
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| || ||||||  ||||||||| | || ||||  |||| |||| |||||||||||||||||||||||| |||||||||||||    
T  40993288 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattt 40993373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 664 - 711
Target Start/End: Complemental strand, 8842397 - 8842350
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  8842397 tgtcgtgtctgacaccgacatatataattacaccaaattatgtgattt 8842350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 7928513 - 7928471
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  7928513 tgtccgacaccgacacatataattacactgaattatgtgattt 7928471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 49505150 - 49505192
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  49505150 tgtccgacactgacacatataattacactaaattatgtgattt 49505192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 11666002 - 11665965
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  11666002 gacaccgacacatataattacactaaattgtgtgattt 11665965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 15314877 - 15314914
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||| |||||||||||||||||||||||||||||||    
T  15314877 gacaccaacacatataattacactaaattatgtgattt 15314914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 711
Target Start/End: Complemental strand, 55401149 - 55401096
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||| |||| ||||||||||| | ||||||||||||||||||||||||    
T  55401149 gacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 55401096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 711
Target Start/End: Complemental strand, 2941635 - 2941579
Alignment:
Q  655 tcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| |||| |||| ||||||||||||||||||||||||  ||| ||||||||    
T  2941635 tcagacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgattt 2941579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 711
Target Start/End: Original strand, 8789541 - 8789588
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| |||||||||||||||||||||||  |||||||||||||    
T  8789541 tgtcgtgtccgacaccgacacatataattacacggaattatgtgattt 8789588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 711
Target Start/End: Original strand, 32804547 - 32804578
Alignment:
Q  680 gacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattt 32804578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 10268482 - 10268524
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||| ||||| | ||||||||||||||||||||||||    
T  10268482 tgtctgacactgacacttgtaattacactaaattatgtgattt 10268524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 681 - 711
Target Start/End: Original strand, 11313808 - 11313838
Alignment:
Q  681 acacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||||||||||    
T  11313808 acacatataattacactaaattatgtgattt 11313838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 20691382 - 20691340
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||| |||||||| |||||||| ||||    
T  20691382 tgtctgacaccgacacatatgattacactgaattatgtcattt 20691340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 25093565 - 25093523
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  25093565 tgtccgacaccgacacatataattacactgaattgtgtgattt 25093523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 673 - 711
Target Start/End: Original strand, 48202269 - 48202307
Alignment:
Q  673 tgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  48202269 tgacacagacacatataattacattaaattatgtgattt 48202307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 1509597 - 1509560
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  1509597 gacaccgacacttgtaattacactaaattatgtgattt 1509560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 709
Target Start/End: Complemental strand, 23657859 - 23657762
Alignment:
Q  612 actatgaagtaaaaacacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgat 709  Q
    |||||||||||   |||||| | ||||||   |||||||| |||| |||| |||||||||| |||||||| |  |||||||||||| |||||| ||||    
T  23657859 actatgaagtacggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaattatatgat 23657762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 28678361 - 28678324
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  28678361 gacaccgacacatacaattatactaaattatgtgattt 28678324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 38731276 - 38731239
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  38731276 gacaccgacacatataactacactgaattatgtgattt 38731239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 711
Target Start/End: Original strand, 2896074 - 2896159
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||   |||||||| | || |||||||||| ||||||||||||||| |||||  |||||| |||||||||||||    
T  2896074 acacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattt 2896159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 711
Target Start/End: Original strand, 29163333 - 29163419
Alignment:
Q  625 aacacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||  ||||| |||||||||| | |||| ||| |||| |||| |||||||||||||||||||| | | |||||||||||||    
T  29163333 aacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattt 29163419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 711
Target Start/End: Original strand, 5898251 - 5898304
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||| |||||||||||||| |||||||||||||| |||||||||||||    
T  5898251 gacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattt 5898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 711
Target Start/End: Complemental strand, 30749913 - 30749861
Alignment:
Q  659 acacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||  |||| |||||||||||||||||||||||| |||||||||||||    
T  30749913 acacatgtggtgtccgacaccgacacatataattacactgaattatgtgattt 30749861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 711
Target Start/End: Complemental strand, 30771364 - 30771312
Alignment:
Q  659 acacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||  |||| |||||||||||||||||||||||| |||||||||||||    
T  30771364 acacatgtggtgtccgacaccgacacatataattacactgaattatgtgattt 30771312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 2784619 - 2784577
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  2784619 tgtctgacaccgacacatataattatactcaattatgtgattt 2784577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 14332638 - 14332680
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  14332638 tgtccgacaccgagacatataattacactaaattatgtgattt 14332680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 39953142 - 39953184
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  39953142 tgtccgacaccgacacatacaattacactaaattatgtgattt 39953184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 25272540 - 25272503
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  25272540 gacaccgacacttataattacactaaattatgtgattt 25272503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 34371771 - 34371734
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||||||||||||    
T  34371771 gacaccgacacatataattacactgaattatgtgattt 34371734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 44482288 - 44482251
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| |||||||||||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattt 44482251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 711
Target Start/End: Original strand, 1864882 - 1864918
Alignment:
Q  675 acaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||| |||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattt 1864918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 711
Target Start/End: Complemental strand, 13997940 - 13997904
Alignment:
Q  675 acaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||| |||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgattt 13997904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 711
Target Start/End: Original strand, 7353484 - 7353531
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||  |||||||||| |||||||||||||||||||||| ||||    
T  7353484 tgtcatgttcgacaccgacatatataattacactaaattatgtaattt 7353531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 711
Target Start/End: Original strand, 22515878 - 22515925
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| ||||||||||| | ||||||||||||||||||||||||    
T  22515878 tgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 22515925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 711
Target Start/End: Original strand, 22881607 - 22881654
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| ||||||||||| | ||||||||||||||||||||||||    
T  22881607 tgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 22881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 704
Target Start/End: Original strand, 39130763 - 39130798
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattat 704  Q
    |||| |||||||||||||||||||||||||||||||    
T  39130763 tgtccgacaccgacacatataattacactaaattat 39130798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 711
Target Start/End: Original strand, 40258924 - 40258971
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||| | |||||||||| |||||||||||||    
T  40258924 tgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattt 40258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 13436521 - 13436479
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||| ||||||||||||||||| |||||||||||||    
T  13436521 tgtccgacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 23636045 - 23636087
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||    
T  23636045 tgtctgacaccgacacatacaattacactgaattatgtaattt 23636087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 677 - 711
Target Start/End: Original strand, 34257914 - 34257948
Alignment:
Q  677 accgacacatataattacactaaattatgtgattt 711  Q
    ||||||| |||||||||||||||||||||||||||    
T  34257914 accgacatatataattacactaaattatgtgattt 34257948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 36878524 - 36878482
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||| |||||||||||| |||||||||||||    
T  36878524 tgtcagacaccgacacctataattacactgaattatgtgattt 36878482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 40181934 - 40181892
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||| ||||||||||||||| |||||||||||||    
T  40181934 tgtccgacaccgatacatataattacactgaattatgtgattt 40181892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 52903312 - 52903270
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||||||| |||||| ||||||    
T  52903312 tgtccgacaccgacacatataattacactgaattatatgattt 52903270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 1486710 - 1486747
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  1486710 gacaccgacacttataattacactgaattatgtgattt 1486747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 5944341 - 5944304
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  5944341 gacaccgacacttataattacactgaattatgtgattt 5944304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 7918212 - 7918249
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  7918212 gacactgacacatataattacactgaattatgtgattt 7918249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 9828102 - 9828065
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  9828102 gacaccgacacataaaattacactgaattatgtgattt 9828065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 710
Target Start/End: Complemental strand, 12919052 - 12918967
Alignment:
Q  625 aacacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgatt 710  Q
    ||||||||| |||| | |||||||||  | |||||||| |||| |||| || ||| ||||||||||| ||| | ||||||||||||    
T  12919052 aacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgatt 12918967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 20157351 - 20157388
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  20157351 gacaccgacacatatgattacactgaattatgtgattt 20157388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 25361944 - 25361907
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattt 25361907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 34712384 - 34712421
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  34712384 gacactgacacatataattacactaaattatgttattt 34712421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 711
Target Start/End: Original strand, 42359402 - 42359487
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| || ||||||  ||||||||| | || |||||| ||| |||| ||||||||||| | |||||||||| |||| ||||||||    
T  42359402 acactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattt 42359487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 711
Target Start/End: Original strand, 46348368 - 46348421
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||| |||| ||||||||||| | ||||||||||||||||| ||||||    
T  46348368 gacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattt 46348421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 34784983 - 34785020
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34784983 gacaccgacacatataattacactaaattatgtgattt 34785020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 711
Target Start/End: Original strand, 20242709 - 20242765
Alignment:
Q  655 tcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||| |||  |||| |||||||||||||||||||||||| |||||||||||||    
T  20242709 tcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattt 20242765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 664 - 711
Target Start/End: Complemental strand, 5367260 - 5367213
Alignment:
Q  664 tgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||    
T  5367260 tgtcgtgtccgacaccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 20922924 - 20922966
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  20922924 tgtccgacacagacacatataattacactaaattatgtgattt 20922966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 711
Target Start/End: Original strand, 40361738 - 40361792
Alignment:
Q  657 agacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||| |||| ||||||||||| ||| |||||||||||||||||||||| ||||    
T  40361738 agacacgtgtcgtgtctgacaccaacagatataattacactaaattatgtaattt 40361792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 677 - 711
Target Start/End: Original strand, 30527599 - 30527633
Alignment:
Q  677 accgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||||||| ||||||    
T  30527599 accgacacatataattacactaaattatatgattt 30527633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Complemental strand, 31018653 - 31018611
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| ||||||||||| |||||||||||||||| |||||||||    
T  31018653 tgtccgacaccgacacctataattacactaaatcatgtgattt 31018611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 34691801 - 34691843
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||||||| |||||| ||||||    
T  34691801 tgtccgacaccgacacatataattacactgaattatatgattt 34691843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 669 - 711
Target Start/End: Original strand, 34714213 - 34714255
Alignment:
Q  669 tgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||| |||||||||||||||||||||||| |||||| ||||||    
T  34714213 tgtccgacaccgacacatataattacactgaattatatgattt 34714255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 673 - 711
Target Start/End: Original strand, 38355887 - 38355925
Alignment:
Q  673 tgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  38355887 tgacaccgacacatataatcacactgaattatgtgattt 38355925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 711
Target Start/End: Original strand, 2438672 - 2438757
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| || ||||||  ||||||||| | || ||||  |||| |||| ||||||||||| | |||||||||| |||||||||||||    
T  2438672 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 2438757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 711
Target Start/End: Original strand, 2665897 - 2665926
Alignment:
Q  682 cacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||||||||||||    
T  2665897 cacatataattacactaaattatgtgattt 2665926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 711
Target Start/End: Complemental strand, 5040808 - 5040755
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||| |||| ||||||||||| | |||||||| | |||||||||||||    
T  5040808 gacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattt 5040755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 18889592 - 18889629
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattt 18889629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 711
Target Start/End: Complemental strand, 37559083 - 37558998
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| || ||||||| ||||| ||| | || ||||| ||||| ||| ||||||||||| | |||||||| | |||||||||||||    
T  37559083 acactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgattt 37558998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 44860378 - 44860341
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  44860378 gacaccgacacatataattacactgaattatgcgattt 44860341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 626 - 684
Target Start/End: Complemental strand, 53297 - 53239
Alignment:
Q  626 acacttcttggattaaccgtgtcccgatatcagacacatgtcatgtctgacaccgacac 684  Q
    |||||||||||||||| ||||||||| | || ||||| ||||||||| |||||||||||    
T  53297 acacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

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Target: scaffold0236 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 25769 - 25806
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  25769 gacaccgacacttataattacactaaattatgtgattt 25806  T

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Target: scaffold0279 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 696
Target Start/End: Complemental strand, 17844 - 17806
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacac 696  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  17844 gacacatgtcgtgtctgacaccgacacatacaattacac 17806  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 677 - 711
Target Start/End: Original strand, 44529 - 44563
Alignment:
Q  677 accgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||||||||||||| |||||||||||||    
T  44529 accgacacatataattacactgaattatgtgattt 44563  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 23478 - 23441
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  23478 gacaccgacacttataattacactgaattatgtgattt 23441  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 711
Target Start/End: Complemental strand, 70352 - 70299
Alignment:
Q  658 gacacatgtcatgtctgacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||| |||| |||| ||||||||||| |||||||||||| |||||||| ||||    
T  70352 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattt 70299  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 9748 - 9785
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  9748 gacaccgacacatataattacactgaattaagtgattt 9785  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 135313 - 135350
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||||||||||||||  |||||||||||||    
T  135313 gacaccgacacatataattacacagaattatgtgattt 135350  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Original strand, 17750 - 17787
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattt 17787  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 241652 - 241615
Alignment:
Q  674 gacaccgacacatataattacactaaattatgtgattt 711  Q
    |||||||||||  |||||||||||||||||||||||||    
T  241652 gacaccgacactcataattacactaaattatgtgattt 241615  T

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