View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10392_low_20 (Length: 319)

Name: NF10392_low_20
Description: NF10392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10392_low_20
NF10392_low_20
[»] chr6 (32 HSPs)
chr6 (1-178)||(15004746-15004923)
chr6 (1-178)||(22585384-22585562)
chr6 (1-178)||(22590215-22590393)
chr6 (1-178)||(15889544-15889722)
chr6 (26-177)||(23223015-23223167)
chr6 (26-177)||(23222180-23222332)
chr6 (26-177)||(21931468-21931619)
chr6 (26-177)||(19175415-19175566)
chr6 (1-93)||(25640480-25640572)
chr6 (34-176)||(22461930-22462072)
chr6 (26-177)||(16136527-16136678)
chr6 (41-177)||(17856290-17856426)
chr6 (26-178)||(34967131-34967283)
chr6 (79-176)||(17013470-17013569)
chr6 (251-308)||(15004615-15004673)
chr6 (26-177)||(29158216-29158367)
chr6 (106-176)||(19854499-19854570)
chr6 (41-177)||(18733183-18733320)
chr6 (251-308)||(34967363-34967421)
chr6 (87-166)||(17374772-17374851)
chr6 (1-93)||(35015081-35015173)
chr6 (251-308)||(15889411-15889469)
chr6 (251-308)||(22585251-22585309)
chr6 (251-308)||(22590082-22590140)
chr6 (1-93)||(19983216-19983308)
chr6 (1-62)||(26089974-26090035)
chr6 (1-93)||(18583556-18583648)
chr6 (1-59)||(4991311-4991369)
chr6 (1-58)||(15742178-15742235)
chr6 (1-62)||(18002451-18002512)
chr6 (79-135)||(31467470-31467527)
chr6 (79-146)||(32352363-32352431)
[»] chr8 (36 HSPs)
chr8 (5-178)||(17502404-17502578)
chr8 (1-166)||(23218116-23218283)
chr8 (26-175)||(16002262-16002411)
chr8 (1-93)||(21259415-21259507)
chr8 (5-80)||(4234098-4234173)
chr8 (26-178)||(18041363-18041515)
chr8 (26-177)||(22497040-22497192)
chr8 (35-177)||(22723451-22723594)
chr8 (2-166)||(20175615-20175781)
chr8 (2-166)||(20220342-20220508)
chr8 (26-177)||(22888025-22888177)
chr8 (77-176)||(4234395-4234495)
chr8 (79-178)||(33172542-33172642)
chr8 (83-178)||(24552401-24552497)
chr8 (79-176)||(45464960-45465059)
chr8 (20-177)||(22314329-22314487)
chr8 (21-177)||(24239873-24240030)
chr8 (79-175)||(18261308-18261404)
chr8 (1-93)||(24385676-24385768)
chr8 (1-176)||(18118121-18118297)
chr8 (79-176)||(31590318-31590417)
chr8 (79-178)||(45558768-45558868)
chr8 (79-163)||(27232938-27233022)
chr8 (255-299)||(18041239-18041284)
chr8 (251-299)||(33172717-33172766)
chr8 (1-93)||(24716786-24716878)
chr8 (1-93)||(39115514-39115606)
chr8 (1-93)||(41506733-41506825)
chr8 (251-308)||(23218370-23218428)
chr8 (264-308)||(4234587-4234631)
chr8 (264-299)||(24240122-24240157)
chr8 (251-299)||(22888252-22888302)
chr8 (1-69)||(274682-274750)
chr8 (1-69)||(641099-641167)
chr8 (1-69)||(826905-826973)
chr8 (79-162)||(19331164-19331248)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-178)||(3675-3853)
[»] scaffold0063 (2 HSPs)
scaffold0063 (1-176)||(43954-44130)
scaffold0063 (251-308)||(43819-43877)
[»] chr7 (38 HSPs)
chr7 (1-178)||(13352191-13352369)
chr7 (26-178)||(8267559-8267711)
chr7 (20-177)||(8563178-8563336)
chr7 (1-177)||(9723637-9723815)
chr7 (79-177)||(18079328-18079427)
chr7 (29-177)||(45149851-45150000)
chr7 (2-166)||(44304854-44305020)
chr7 (26-178)||(46474266-46474419)
chr7 (79-178)||(33559963-33560063)
chr7 (79-175)||(9250755-9250852)
chr7 (79-175)||(9319397-9319494)
chr7 (1-76)||(39291450-39291525)
chr7 (79-176)||(4439100-4439198)
chr7 (70-157)||(21675393-21675481)
chr7 (106-176)||(19070208-19070278)
chr7 (78-177)||(39286009-39286109)
chr7 (87-177)||(21537628-21537719)
chr7 (79-176)||(4446529-4446627)
chr7 (1-109)||(18151213-18151320)
chr7 (79-175)||(38424534-38424631)
chr7 (1-93)||(2029160-2029252)
chr7 (86-176)||(13448659-13448751)
chr7 (4-177)||(15977679-15977854)
chr7 (108-176)||(28390646-28390715)
chr7 (1-93)||(1936941-1937033)
chr7 (1-93)||(3049821-3049913)
chr7 (1-93)||(32493970-32494062)
chr7 (79-175)||(16384001-16384098)
chr7 (1-93)||(126654-126746)
chr7 (106-162)||(14935705-14935761)
chr7 (106-162)||(15363298-15363354)
chr7 (1-62)||(15516817-15516878)
chr7 (1-62)||(42056244-42056305)
chr7 (1-93)||(111193-111285)
chr7 (79-162)||(14942318-14942402)
chr7 (79-162)||(15369911-15369995)
chr7 (1-62)||(2190141-2190202)
chr7 (79-175)||(28722425-28722522)
[»] chr4 (26 HSPs)
chr4 (4-176)||(19559601-19559775)
chr4 (1-177)||(49071926-49072099)
chr4 (26-178)||(54398647-54398799)
chr4 (79-178)||(41916574-41916673)
chr4 (22-177)||(12133440-12133597)
chr4 (1-177)||(13589904-13590082)
chr4 (79-176)||(10237101-10237199)
chr4 (26-175)||(50219777-50219926)
chr4 (79-178)||(47468179-47468279)
chr4 (88-178)||(18236031-18236122)
chr4 (106-177)||(54363124-54363195)
chr4 (79-178)||(28428066-28428167)
chr4 (106-174)||(15213460-15213527)
chr4 (79-176)||(13442509-13442608)
chr4 (79-176)||(40904766-40904865)
chr4 (251-308)||(10375022-10375080)
chr4 (1-93)||(5682452-5682543)
chr4 (1-93)||(14952001-14952093)
chr4 (251-308)||(19559852-19559910)
chr4 (251-299)||(47468056-47468105)
chr4 (1-59)||(34177598-34177656)
chr4 (1-62)||(15272267-15272328)
chr4 (79-175)||(38765023-38765120)
chr4 (251-299)||(41916450-41916499)
chr4 (251-308)||(50219642-50219699)
chr4 (1-69)||(25119155-25119223)
[»] chr2 (20 HSPs)
chr2 (35-178)||(29114642-29114786)
chr2 (26-177)||(18537020-18537171)
chr2 (26-178)||(9637009-9637161)
chr2 (26-178)||(9637238-9637390)
chr2 (26-178)||(9637467-9637619)
chr2 (26-177)||(6094950-6095101)
chr2 (26-177)||(25595284-25595436)
chr2 (26-178)||(9637696-9637848)
chr2 (79-178)||(24278076-24278176)
chr2 (1-92)||(7321756-7321847)
chr2 (79-176)||(16292633-16292732)
chr2 (106-177)||(20279757-20279828)
chr2 (1-93)||(22274961-22275053)
chr2 (251-308)||(9637922-9637980)
chr2 (1-67)||(9652846-9652912)
chr2 (1-62)||(21274004-21274065)
chr2 (1-62)||(25213287-25213348)
chr2 (256-295)||(6095177-6095217)
chr2 (1-93)||(15633453-15633545)
chr2 (1-93)||(22284194-22284286)
[»] chr3 (43 HSPs)
chr3 (1-175)||(18970160-18970335)
chr3 (26-178)||(43427345-43427496)
chr3 (38-175)||(40038764-40038901)
chr3 (1-177)||(38375528-38375704)
chr3 (26-177)||(10913150-10913301)
chr3 (21-178)||(17758438-17758597)
chr3 (21-178)||(19059758-19059917)
chr3 (35-177)||(25103823-25103966)
chr3 (79-177)||(31411470-31411569)
chr3 (1-93)||(15550837-15550929)
chr3 (79-176)||(11638614-11638713)
chr3 (86-176)||(41661887-41661979)
chr3 (39-176)||(37915125-37915263)
chr3 (112-176)||(50313564-50313629)
chr3 (4-59)||(48421819-48421874)
chr3 (79-176)||(8605141-8605239)
chr3 (22-170)||(12538906-12539056)
chr3 (79-176)||(21166914-21167012)
chr3 (79-175)||(4162040-4162137)
chr3 (1-93)||(7854221-7854313)
chr3 (1-93)||(45581870-45581962)
chr3 (79-175)||(6224920-6225017)
chr3 (1-62)||(11402829-11402890)
chr3 (4-93)||(23492615-23492704)
chr3 (1-69)||(2844430-2844498)
chr3 (1-93)||(17955908-17956000)
chr3 (1-69)||(30153181-30153249)
chr3 (1-69)||(33342120-33342188)
chr3 (1-69)||(54685249-54685317)
chr3 (1-93)||(55513109-55513201)
chr3 (2-69)||(38168154-38168221)
chr3 (251-299)||(31411345-31411394)
chr3 (79-175)||(33368763-33368860)
chr3 (1-62)||(53771280-53771341)
chr3 (26-62)||(11515438-11515474)
chr3 (1-93)||(28558410-28558502)
chr3 (79-175)||(14814600-14814697)
chr3 (1-62)||(16261692-16261753)
chr3 (87-135)||(17393759-17393808)
chr3 (264-308)||(17758305-17758348)
chr3 (264-308)||(19059625-19059668)
chr3 (259-299)||(50313716-50313756)
chr3 (1-93)||(54038048-54038140)
[»] scaffold0601 (1 HSPs)
scaffold0601 (26-177)||(711-863)
[»] scaffold0057 (2 HSPs)
scaffold0057 (42-177)||(6147-6283)
scaffold0057 (251-299)||(6360-6410)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-177)||(19766-19943)
[»] scaffold0022 (2 HSPs)
scaffold0022 (26-177)||(67788-67940)
scaffold0022 (79-176)||(132129-132228)
[»] chr5 (20 HSPs)
chr5 (26-177)||(19874025-19874177)
chr5 (1-177)||(23417481-23417657)
chr5 (26-177)||(11763335-11763487)
chr5 (26-177)||(23234313-23234468)
chr5 (79-178)||(26559647-26559746)
chr5 (26-174)||(16835133-16835282)
chr5 (79-178)||(21110066-21110166)
chr5 (79-176)||(5621627-5621725)
chr5 (1-59)||(25005055-25005113)
chr5 (1-93)||(11342924-11343016)
chr5 (79-157)||(22885946-22886025)
chr5 (1-69)||(2032049-2032117)
chr5 (1-69)||(21205165-21205233)
chr5 (1-59)||(22662632-22662691)
chr5 (79-175)||(6456936-6457033)
chr5 (1-62)||(16105882-16105943)
chr5 (251-299)||(26559522-26559571)
chr5 (268-308)||(23234209-23234249)
chr5 (253-299)||(21110244-21110291)
chr5 (1-69)||(21650934-21651002)
[»] chr1 (15 HSPs)
chr1 (26-177)||(33397609-33397761)
chr1 (26-177)||(25094123-25094272)
chr1 (26-173)||(20194290-20194438)
chr1 (79-175)||(20836744-20836841)
chr1 (35-177)||(20822896-20823039)
chr1 (26-177)||(76250-76401)
chr1 (1-177)||(18852550-18852726)
chr1 (26-177)||(40436100-40436252)
chr1 (79-178)||(5768000-5768100)
chr1 (4-93)||(44034895-44034984)
chr1 (79-175)||(49997116-49997213)
chr1 (79-175)||(52400946-52401043)
chr1 (1-69)||(15861374-15861442)
chr1 (2-69)||(21860251-21860318)
chr1 (79-175)||(21195329-21195426)
[»] scaffold0561 (1 HSPs)
scaffold0561 (26-177)||(2603-2755)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-177)||(33245-33421)
[»] scaffold0670 (2 HSPs)
scaffold0670 (26-178)||(7506-7658)
scaffold0670 (251-308)||(7372-7430)
[»] scaffold0014 (1 HSPs)
scaffold0014 (26-164)||(113978-114116)
[»] scaffold0013 (2 HSPs)
scaffold0013 (27-177)||(6910-7061)
scaffold0013 (251-299)||(6784-6833)
[»] scaffold0153 (2 HSPs)
scaffold0153 (79-175)||(8806-8903)
scaffold0153 (251-308)||(8986-9042)
[»] scaffold0317 (1 HSPs)
scaffold0317 (20-177)||(12433-12592)
[»] scaffold0004 (5 HSPs)
scaffold0004 (79-178)||(27813-27913)
scaffold0004 (79-177)||(86672-86771)
scaffold0004 (251-308)||(27988-28046)
scaffold0004 (1-69)||(193445-193513)
scaffold0004 (251-308)||(86848-86906)
[»] scaffold0452 (1 HSPs)
scaffold0452 (79-177)||(2617-2716)
[»] scaffold0183 (1 HSPs)
scaffold0183 (106-177)||(11322-11393)
[»] scaffold0148 (1 HSPs)
scaffold0148 (79-176)||(37873-37972)
[»] scaffold0133 (1 HSPs)
scaffold0133 (79-176)||(25663-25762)
[»] scaffold0112 (1 HSPs)
scaffold0112 (109-176)||(13494-13561)
[»] scaffold0065 (1 HSPs)
scaffold0065 (79-176)||(67730-67828)
[»] scaffold0231 (1 HSPs)
scaffold0231 (22-177)||(12563-12720)
[»] scaffold0009 (1 HSPs)
scaffold0009 (79-175)||(244597-244694)
[»] scaffold0406 (1 HSPs)
scaffold0406 (78-176)||(14350-14450)
[»] scaffold0017 (2 HSPs)
scaffold0017 (79-177)||(13084-13183)
scaffold0017 (256-295)||(13259-13299)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-160)||(34306-34466)
[»] scaffold0084 (2 HSPs)
scaffold0084 (1-177)||(55215-55392)
scaffold0084 (1-164)||(2922-3086)
[»] scaffold0165 (2 HSPs)
scaffold0165 (86-176)||(30288-30380)
scaffold0165 (79-176)||(22314-22413)
[»] scaffold1295 (1 HSPs)
scaffold1295 (4-59)||(348-403)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-59)||(1459-1517)
[»] scaffold0597 (1 HSPs)
scaffold0597 (1-93)||(902-994)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-93)||(42593-42685)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-93)||(55820-55912)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-90)||(31207-31296)
[»] scaffold0130 (1 HSPs)
scaffold0130 (79-175)||(26826-26923)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-90)||(41548-41637)
[»] scaffold0686 (2 HSPs)
scaffold0686 (1-69)||(5825-5893)
scaffold0686 (1-69)||(6031-6099)
[»] scaffold0034 (1 HSPs)
scaffold0034 (5-93)||(80107-80195)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-69)||(162126-162194)
scaffold0016 (1-69)||(166212-166280)
[»] scaffold0634 (1 HSPs)
scaffold0634 (79-175)||(5726-5823)
[»] scaffold0387 (1 HSPs)
scaffold0387 (79-175)||(797-894)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-62)||(13341-13402)
[»] scaffold0174 (1 HSPs)
scaffold0174 (79-175)||(2340-2437)
[»] scaffold0116 (1 HSPs)
scaffold0116 (4-93)||(30336-30425)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-62)||(130795-130856)
[»] scaffold0012 (1 HSPs)
scaffold0012 (141-178)||(180712-180749)
[»] scaffold0342 (1 HSPs)
scaffold0342 (5-75)||(393-463)
[»] scaffold0205 (1 HSPs)
scaffold0205 (251-299)||(8421-8471)
[»] scaffold0303 (1 HSPs)
scaffold0303 (5-62)||(4402-4459)
[»] scaffold1518 (1 HSPs)
scaffold1518 (267-299)||(620-652)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-93)||(6467-6559)
[»] scaffold0234 (1 HSPs)
scaffold0234 (5-69)||(17352-17416)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-53)||(15188-15240)
[»] scaffold0039 (1 HSPs)
scaffold0039 (5-93)||(12442-12530)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 15004923 - 15004746
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15004923 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 15004824  T
Q  101 tttaaccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15004823 tttaaccccttacctcaattagcaattatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 15004746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 22585562 - 22585384
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22585562 cacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 22585463  T
Q  101 tttaa-ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22585462 tctaacccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctagaatctctatcacctcttggg 22585384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 22590393 - 22590215
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22590393 cacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 22590294  T
Q  101 tttaa-ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22590293 tctaacccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctagaatctctatcacctcttggg 22590215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 15889722 - 15889544
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  15889722 cacgaatttcaaaggttgggttcacaataatcacgtattcaaataaacacttatgcatagaaaaagagagaagaaattaactaagtgattatgattgaaa 15889623  T
Q  101 tttaa-ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    | ||| |||||||||||||||||||||||| || |||||| |||||||||||||| || |||||||||||| |||||||    
T  15889622 tctaacccccttacctcaattagcaataattcttgcaaaagcttcaatttagctcatagaatctctatcacatcttggg 15889544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 23223015 - 23223167
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaac-cccttacctcaattagca 124  Q
    ||||||| ||||||||||||||||||||||||||  |  || || ||||    ||||||||||||||| ||||||| |||| ||||||||||||| ||||    
T  23223015 aataatcacttattcaaataagcacttatgcatatgattagggaaaagattacaactaagtgattatgattgaaatctaacacccttacctcaataagca 23223114  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  23223115 ataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 23223167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 23222180 - 23222332
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaac-cccttacctcaattagca 124  Q
    ||||||| ||||||||| ||| |||||||||||| ||  || || ||||    ||||||||||||||| |||||||||||| ||||||||||||| | ||    
T  23222180 aataatcacttattcaattaatcacttatgcatataattagggaaaagattacaactaagtgattatgattgaaatttaacacccttacctcaataaaca 23222279  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  23222280 ataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 23222332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 21931468 - 21931619
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc-ttacctcaattagc 123  Q
    ||||||| |||||||||||||||||||||||||||||  || ||  ||||||||| ||| | ||||||| ||||||| ||||||| |||||||| | |||    
T  21931468 aataatcacttattcaaataagcacttatgcatagaattaggga--agaaactaaactaggagattatgattgaaatctaacccccttacctcagtaagc 21931565  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  21931566 aataatcctagcaaaagcttcaatttagctcctagaatatctatcacctcttgg 21931619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 19175415 - 19175566
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaa-ccccttacctcaattagc 123  Q
    ||||||| ||| ||||||||||||| |||||||||||  || ||  ||||||||| || || |||||||  |||||| ||| |||||||||||||| |||    
T  19175415 aataatcactttttcaaataagcacatatgcatagaattaggga--agaaactaaactgagagattatgaatgaaatctaatccccttacctcaataagc 19175512  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  19175513 aataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 19175566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 25640572 - 25640480
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  25640572 cacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagtagaaattacctaagtgattatg 25640480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 176
Target Start/End: Complemental strand, 22462072 - 22461930
Alignment:
Q  34 cttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcct 132  Q
    |||||||||||||||||||||||||| ||  || || ||   || ||||||||||||||  ||||||| ||||||| |||||||||| ||||||||||||    
T  22462072 cttattcaaataagcacttatgcatacaattagggaaaaattac-aactaagtgattattattgaaatctaacccccttacctcaataagcaataatcct 22461974  T
Q  133 agcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||    
T  22461973 agcaaaagcttcaattttgctcctagaatctctatcacctcttg 22461930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 16136527 - 16136678
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaac-cccttacctcaattagc 123  Q
    ||||||| |||||||||||||||||||||||||||||  || ||   |||||||| ||||| ||||||  ||||||| |||| ||||||||||||| |||    
T  16136527 aataatcacttattcaaataagcacttatgcatagaattagggat--gaaactaaactaagagattatcattgaaatctaactcccttacctcaataagc 16136624  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||| |||||||| |||||||| |||||||| | ||||||||    
T  16136625 aataatcctagcaaaagcttcaattaagctcctagaatctctagctcctcttgg 16136678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 17856426 - 17856290
Alignment:
Q  41 aaataagcacttatgcatagaaaaagaga-gaagaaactaactaagtgattatgcttgaaatttaaccccttacctcaattagcaataatcctagcaaaa 139  Q
    |||||||||| |||||||||||  ||||| ||||  || ||||||| ||||||| ||||||| ||||||| ||||||||| | ||||||||||| |||||    
T  17856426 aaataagcacgtatgcatagaattagagaagaagctac-aactaagagattatgattgaaatctaaccccctacctcaataaacaataatcctaacaaaa 17856328  T
Q  140 acttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  17856327 acttcaattaagctcctagaatctctatcacctcttgg 17856290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 34967131 - 34967283
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| ||||||||| |||||||||| ||||| ||  || || ||   || ||||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  34967131 aataatcacttattcaattaagcacttaagcatacaattagggaaaaattac-aactaagtgattatgattgaaatctaacccccttacctcaataagca 34967229  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||||| |||||||| |||||||||||||| || ||||||||||||||||||||    
T  34967230 ataatcttagcaaaagcttcaatttagctcatagaatctctatcacctcttggg 34967283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 17013569 - 17013470
Alignment:
Q  79 aactaagtgattatgcttgaaatttaac-cccttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||| | |||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  17013569 aactaattgattatggttgaactctaactcccttacctcaattagcaactaatcctagccaaagcttcaatttagctcctagaatctctatcacctcttg 17013470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 15004673 - 15004615
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15004673 atgaaatgaaatgaaaacctattttctctaaagacaagagtttatataggttcatctca 15004615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 29158367 - 29158216
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaaccc-cttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||| ||||| ||  || || ||   |  |||||| |||||||| ||||||| |||||| ||||| ||||| | ||    
T  29158367 aataatcacttattcaaataagcacttaagcatacaattagggaaaaattag-aactaaatgattatgattgaaatctaaccctcttacttcaataaaca 29158269  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||| | ||||||||||||||||||| |||||| |||||||| ||||||||||    
T  29158268 ataaccatagcaaaaacttcaatttatctcctagaatctctaccacctcttgg 29158216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 19854499 - 19854570
Alignment:
Q  106 ccccttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  19854499 ccccttaccttaattagcaaataatcctagccaaagcttcaatttagctcctagaatctctatcacctcttg 19854570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 18733183 - 18733320
Alignment:
Q  41 aaataagcacttatgcatagaaaaagaga-gaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaa 138  Q
    ||||||||||||||||| ||||  ||||| ||||  || || |||| ||||||| ||||||| ||||||| |||||||||| || |||||||||||||||    
T  18733183 aaataagcacttatgcaaagaattagagaagaagctac-aagtaagagattatgattgaaatctaacccccttacctcaataaggaataatcctagcaaa 18733281  T
Q  139 aacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
      |||||||| |||||||| |||||||| | ||||||||    
T  18733282 ggcttcaattaagctcctagaatctctagctcctcttgg 18733320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 34967363 - 34967421
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  34967363 atgaaatgaaatgaaaacctattttctctaaagacaagagtttatataggctcatctca 34967421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 17374851 - 17374772
Alignment:
Q  87 gattatgcttgaaatttaaccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctcta 166  Q
    ||||||| ||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||| ||||| || ||||||||    
T  17374851 gattatgattgaaatctaaccccttacctcaataaacaataatcctagccaaagcttcaattaagctcatagaatctcta 17374772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 35015173 - 35015081
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  35015173 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 35015081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 15889469 - 15889411
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||| || |||||    
T  15889469 atgaaatgaaatgaaaacccattttctctaaagacaagagtttatataggatcctctca 15889411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 22585309 - 22585251
Alignment:
Q  251 atgaaatgaaatgaaac-ctattttctctaaagacaagagtttatataggttcatctca 308  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| || |||||    
T  22585309 atgaaatgaaatgaaaatctattttctctaaagacaagagtttatataggctcttctca 22585251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 22590140 - 22590082
Alignment:
Q  251 atgaaatgaaatgaaac-ctattttctctaaagacaagagtttatataggttcatctca 308  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| || |||||    
T  22590140 atgaaatgaaatgaaaatctattttctctaaagacaagagtttatataggctcttctca 22590082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19983308 - 19983216
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||| ||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  19983308 cacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 19983216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26089974 - 26090035
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  26089974 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 26090035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18583556 - 18583648
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || | |||||||||| | |||| ||  || ||||||| ||||||||    
T  18583556 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaatgatgcatagaacaggagaaaaagaattaactaaatgattatg 18583648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4991311 - 4991369
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcata 59  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||    
T  4991311 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 4991369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15742235 - 15742178
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcat 58  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||    
T  15742235 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcat 15742178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18002512 - 18002451
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| ||||| |  |||| || ||||||||||||    
T  18002512 cacgaatttcaaagattgggttcatgataatcacttatgcccataatcaattatgcatagaa 18002451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 31467527 - 31467470
Alignment:
Q  79 aactaagtgattatgcttgaaatttaa-ccccttacctcaattagcaataatcctagc 135  Q
    ||||||||||||||| ||||||| ||| |||||||||| | ||||||| |||||||||    
T  31467527 aactaagtgattatgattgaaatctaacccccttaccttagttagcaaaaatcctagc 31467470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 32352363 - 32352431
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacc-ccttacctcaattagcaataatcctagcaaaaacttcaa 146  Q
    |||||| |||||||| ||||||| ||||| |||  |||||||||||||||||| |||| ||| ||||||    
T  32352363 aactaattgattatgattgaaatctaacctcctcgcctcaattagcaataatcatagccaaagcttcaa 32352431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 4e-75; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 17502404 - 17502578
Alignment:
Q  5 aatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaattta 104  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17502404 aatttcaaagattgggttcataataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatcta 17502503  T
Q  105 a-ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    | ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  17502504 acccccttatctcaattagcaataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttggg 17502578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 23218116 - 23218283
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23218116 cacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 23218215  T
Q  101 tttaacccc--ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctcta 166  Q
    | |||||||  |||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  23218216 tctaaccccttttacctcaattagcaataatcctagcaaaagcttcaatttagcgcctagaatctcta 23218283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 16002262 - 16002411
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc-ttacctcaattagc 123  Q
    ||||||| |||||||||||||||||||||||||||||   | ||  ||||| ||| ||||| ||||||| ||||||| ||||||| |||||||||| |||    
T  16002262 aataatcacttattcaaataagcacttatgcatagaatttggga--agaaattaagctaagagattatgattgaaatctaacccccttacctcaataagc 16002359  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  16002360 aataatcctagcaaaagcttcaatttagctcctagaatctctatcacctctt 16002411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21259507 - 21259415
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  21259507 cacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagtagaaattaactaagtgattatg 21259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 4234098 - 4234173
Alignment:
Q  5 aatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa 80  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4234098 aatttcaaagattgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaactaa 4234173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 18041515 - 18041363
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaa-ccccttacctcaattagca 124  Q
    ||||||| ||||||||| |||||||||| ||||| ||  || || ||||    ||||||||||||||| ||||||| ||| |||||||||||||| ||||    
T  18041515 aataatcacttattcaattaagcacttaagcatacaattaggga-aagattacaactaagtgattatgattgaaatctaaaccccttacctcaataagca 18041417  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  18041416 ataatcctagcaaaagcttcaatttaactcctagaatctctatcacctcttggg 18041363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 22497192 - 22497040
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||||||||| ||  || || ||||    ||||||||||||||| ||||||| | ||||| |||||||||| ||||    
T  22497192 aataatcacttattcaaataagcacttatgcatataattagggaaaagattacaactaagtgattatgattgaaatctgacccccttacctcaataagca 22497093  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||  ||||||||||||| || |||||||||||| ||||||    
T  22497092 ataatcctagcaaaagtttcaatttagctcatagaatctctatcacatcttgg 22497040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 22723451 - 22723594
Alignment:
Q  35 ttattcaaataagcacttatgcatagaaaaagag-agaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcct 132  Q
    |||| |||||||||||||||||||| ||  || | |||||| || |||||| |||||||| ||||||| ||||||| |||||||||| ||||||||||||    
T  22723451 ttatacaaataagcacttatgcatataattagggtagaagatac-aactaaatgattatgattgaaatctaacccccttacctcaataagcaataatcct 22723549  T
Q  133 agcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||    
T  22723550 agcaaaagcttcaatttagcttctagaatctctatcacctcttgg 22723594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 20175781 - 20175615
Alignment:
Q  2 acgaatttcaaagattgggttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||  |||  ||||||||||||| ||||| ||||||||||||||||||||||||  || || ||||    |||||| |||||||| ||||||    
T  20175781 acgaatttcaacaattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagggaaaagattacaactaaatgattatgattgaaa 20175682  T
Q  101 tttaacccctt-acctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctcta 166  Q
    | ||||||||| || ||||| ||||||||||||||||||| |||||| | |||||||||||||||||    
T  20175681 tctaacccctttacttcaataagcaataatcctagcaaaagcttcaagtaagctcctaaaatctcta 20175615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 20220508 - 20220342
Alignment:
Q  2 acgaatttcaaagattgggttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||  |||  ||||||||||||| ||||| ||||||||||||||||||||||||  || || ||||    |||||| |||||||| ||||||    
T  20220508 acgaatttcaacaattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagggaaaagattacaactaaatgattatgattgaaa 20220409  T
Q  101 tttaacccctt-acctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctcta 166  Q
    | ||||||||| || ||||| ||||||||||||||||||| |||||| | |||||||||||||||||    
T  20220408 tctaacccctttacttcaataagcaataatcctagcaaaagcttcaagtaagctcctaaaatctcta 20220342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 22888025 - 22888177
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc-ttacctcaattagc 123  Q
    ||||||| |||||||||||||||||||||||||| ||  || | ||||||| ||| ||||  |||||||  | |||| ||||||| |||||||||| |||    
T  22888025 aataatcacttattcaaataagcacttatgcataaaattaggg-gaagaaattaaactaaaggattatgaataaaatctaacccccttacctcaataagc 22888123  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  22888124 aataattctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 22888177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 4234395 - 4234495
Alignment:
Q  77 ctaactaagtgattatgcttgaaatttaac-cccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||| || ||||||| |||    
T  4234395 ctaactaagtgattatgcttgaaatctaacgcccttacctcaattagcaataaccctagcaaaagcttcaatttagttcctaaaacctttatcaccgctt 4234494  T
Q  176 g 176  Q
    |    
T  4234495 g 4234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 33172542 - 33172642
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||  || |||||||||||||||||||    
T  33172542 aactaattgattatgattgaaatctaacccccttacctcaattagcaataatcctagcaaaagcttcaatttagcttttagaatctctatcacctcttgg 33172641  T
Q  178 g 178  Q
    |    
T  33172642 g 33172642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 24552497 - 24552401
Alignment:
Q  83 aagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||| ||||||| ||||||| |||||| ||||| |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||    
T  24552497 aagtgattatgattgaaatctaacccccttaccttaattaacaataatccttgcaaaaacttcaatttagctcctagaatctttatcacctcttggg 24552401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 45465059 - 45464960
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||| | ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  45465059 aactaattgattatggttgaactctaacccccttacctcaattagcaaataatcctagccaaaacttcaatttagctcctagaatctctatcacctcttg 45464960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 22314329 - 22314487
Alignment:
Q  20 gttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagagagaa-gaaactaactaagtgattatgcttgaaatttaac-cccttacctc 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||  || || || |  || ||||||  ||||||| ||||||| |||| ||||||||||    
T  22314329 gttcacaataatcacttatctcaaataagcacttatgcatagaattagggaaaaagctac-aactaaa-gattatgattgaaatctaacgcccttacctc 22314426  T
Q  117 aattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||| ||||||||||||||| ||| ||||||||||||||||| |||||||| | ||||||||    
T  22314427 aataagcaataatcctagccaaagcttcaatttagctcctagaatctctagctcctcttgg 22314487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 24239873 - 24240030
Alignment:
Q  21 ttcacaataatctcttatt-caaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc-ttacctca 117  Q
    |||| ||||||| |||||| ||| |||||||||||||||||||  || ||  ||||| ||| ||||  |||||||  |||||| ||||||| ||||||||    
T  24239873 ttcaaaataatcacttatttcaattaagcacttatgcatagaattaggga--agaaattaaactaaaggattatgaatgaaatctaacccccttacctca 24239970  T
Q  118 attagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    || ||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||||    
T  24239971 ataagcaataatcccagcaaaagcttcaatttagctccttgaatctctatcacctcttgg 24240030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 18261404 - 18261308
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||||| ||||||||||||| | ||||||| |||||||||  || ||||||||||||||||| |||||| | ||||||||    
T  18261404 aactaattgattatggttgaaatctaaccccttaccttagttagcaaaaatcctagctcaagcttcaatttagctcctagaatctccaccacctctt 18261308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24385768 - 24385676
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||||||||||||||||||||||| ||||||| |||||||  |||| || |||||||||||| |||||| ||| || ||||||| ||||||||    
T  24385768 cacgaatttcaaagattgggttcataataatcacttattctcataatcaattatgcatagaacaagagaaaaggaattaactaaatgattatg 24385676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18118297 - 18118121
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttatt-caaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttga 98  Q
    |||||||||||| ||||  ||||||||||||| |||||| |||||||||| || | ||||  |||  || ||||| | ||| ||||| |||||||  |||    
T  18118297 cacgaatttcaacgattaagttcacaataatcacttatttcaaataagcatttttacata--aaattagggaagagattaaactaagagattatgaatga 18118200  T
Q  99 aatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    ||  || |||| ||||||||| ||| |||||||||||||||| |||||||| ||||| || ||||||||||||||||||    
T  18118199 aaactagcccccttacctcaactagaaataatcctagcaaaagcttcaattaagctcatagaatctctatcacctcttg 18118121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 31590318 - 31590417
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||| | ||||||| ||| |||||||||||| ||||||| || ||| ||||||||||||||||| ||||||||||||||||||    
T  31590318 aactaattgattatgattgaactctaacccccttatctcaattagcaaataatccttgccaaagcttcaatttagctcctagaatctctatcacctcttg 31590417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 45558868 - 45558768
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| |||||||| ||||| | ||||||| |||||| |||||||||||||| |||| ||| |||||||||  |||||| ||||| |||||||||||||    
T  45558868 aactaattgattatgattgaattctaacccccttaccttaattagcaataatcatagccaaagcttcaatttttctcctagaatctttatcacctcttgg 45558769  T
Q  178 g 178  Q
    |    
T  45558768 g 45558768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 27233022 - 27232938
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatct 163  Q
    |||||| |||||||| ||||| | ||||||||||||| | ||||||| |||||||||  ||||||||||||| |||||| |||||    
T  27233022 aactaattgattatggttgaattctaaccccttaccttagttagcaaaaatcctagcccaaacttcaatttatctcctagaatct 27232938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 18041284 - 18041239
Alignment:
Q  255 aatgaaatgaaa-cctattttctctaaagacaagagtttatatagg 299  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  18041284 aatgaaatgaaaacctattttctctaaagacaagagtttatatagg 18041239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 33172717 - 33172766
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatatagg 299  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  33172717 atgaaatgaaatgaaaacctattttctctaaagacaaaagtttatatagg 33172766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24716878 - 24716786
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||||||||||||||| |||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  24716878 cacgaatttcaaagatcgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 24716786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 39115514 - 39115606
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||| ||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  39115514 cacgaatgtcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 39115606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41506825 - 41506733
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||| |||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  41506825 cacggatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 41506733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 23218370 - 23218428
Alignment:
Q  251 atgaaatgaaatgaaac-ctattttctctaaagacaagagtttatataggttcatctca 308  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||||| || |||||    
T  23218370 atgaaatgaaatgaaaaactattttctctaaagacaagagttaatataggctcctctca 23218428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 4234587 - 4234631
Alignment:
Q  264 aaacctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||||||||| ||||||||||||| || |||||    
T  4234587 aaacctattttctctaaagacatgagtttatataggctcctctca 4234631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 24240122 - 24240157
Alignment:
Q  264 aaacctattttctctaaagacaagagtttatatagg 299  Q
    ||||||||||| ||||||||||||||||||||||||    
T  24240122 aaacctattttttctaaagacaagagtttatatagg 24240157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 22888252 - 22888302
Alignment:
Q  251 atgaaatgaaatgaaa-cctatttt-ctctaaagacaagagtttatatagg 299  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  22888252 atgaaatgaaatgaaaacctatttttctctaaagactagagtttatatagg 22888302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 274682 - 274750
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||  |||||||  |||| || |||||||||| | ||||||    
T  274682 cacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcataggacaagaga 274750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 641167 - 641099
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||  |||||||  |||| || |||||||||| | ||||||    
T  641167 cacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcataggacaagaga 641099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 826973 - 826905
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||  |||||||  |||| || |||||||||| | ||||||    
T  826973 cacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcataggacaagaga 826905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 19331248 - 19331164
Alignment:
Q  79 aactaagtgattatgcttgaaatttaa-ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatc 162  Q
    ||||||||||||||| ||||||| ||| |||||||| | | |||| || |||||||||  || |||||||||| |||||| ||||    
T  19331248 aactaagtgattatgattgaaatctaacccccttacattagttagaaaaaatcctagctcaagcttcaatttacctcctagaatc 19331164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 3853 - 3675
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3853 cacgaatttcaaaagttggtttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 3754  T
Q  101 tttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    | ||||||| |||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||||    
T  3753 tctaacccctttacctcaattagcaataatcctaacaaaagcttcaatttagctcatagaatctctatcacctcttggg 3675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 133; Significance: 4e-69; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 44130 - 43954
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  44130 cacgaatttcaaagattaggttcacaataatcacttattcaaataatcacttatgcatagcaaaagagagaagaaattaactaagtgattatgattgaaa 44031  T
Q  101 tttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    | ||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  44030 tctaaccccgttacctcaattagcaataatcctagcaaaaacctcaatttaactcctaaaatctctatcacctcttg 43954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 43877 - 43819
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| || |||||    
T  43877 atgaaatgaaatgaaaacctattttctctaaagacaagggtttatataggctcctctca 43819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 13352191 - 13352369
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13352191 cacgaatttcaagggttgggttcacaataatcacttattcaaataaacacttatgcatagaaaaagagagaagaaactaattaagtgattatgcttgaaa 13352290  T
Q  101 tttaa-ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    | ||| |||||||||||||| |||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||    
T  13352291 tctaacccccttacctcaataagcaataatcctagaaaaagctacaatttagctcctagaatctctatcacctcttggg 13352369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 8267711 - 8267559
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccctt-acctcaattagca 124  Q
    ||||||| |||||||||||||||||||||||||| ||  || || ||   || ||||||||| ||||| ||||||| ||||| ||| |||||||| ||||    
T  8267711 aataatcacttattcaaataagcacttatgcatacaattagggaaaaattac-aactaagtggttatgattgaaatctaacctctttacctcaataagca 8267613  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  8267612 ataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttggg 8267559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 8563336 - 8563178
Alignment:
Q  20 gttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc-ttacctc 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||  || ||  ||||| ||| ||||| |||||||  |||||| ||||||| |||||||    
T  8563336 gttcacaataatcacttatatcaaataagcacttatgcatagaattaggga--agaaaataaactaagagattatgaatgaaatataacccccttacctc 8563239  T
Q  117 aattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  8563238 aataagcaataatcctagcaaaagcttcaatttagctcctagaatctctatcacgtcttgg 8563178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 9723815 - 9723637
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    ||||||||||||  |||  || || ||||||| |||||||||||||||||||||||||| ||  || || || |    ||||||||||||||| ||||||    
T  9723815 cacgaatttcaacaattaagtgcaaaataatcacttattcaaataagcacttatgcatataattagggaaaatattacaactaagtgattatgattgaaa 9723716  T
Q  101 tttaacccc--ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    | |||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||    
T  9723715 tctaaccccccttacctcaataagcaataatcctagcaaaagcttcaatttagctcctcgaatctttatcacctcttgg 9723637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 18079427 - 18079328
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  18079427 aactaagtgattatgattgaaatctaacccccttacctcaataagcaataatcctagcaaaaccttcaatttagctcctagaatctctatcacctcttgg 18079328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 45149851 - 45150000
Alignment:
Q  29 aatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaata 127  Q
    |||| ||||||||||||||||||| |||||| ||  || || ||||    |||||||||||||||  |||||| ||||||| |||||||||| |||||||    
T  45149851 aatcacttattcaaataagcacttgtgcatataattagggaaaagattacaactaagtgattatgaatgaaatctaacccccttacctcaataagcaata 45149950  T
Q  128 atcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  45149951 atcctagcaaaaacttcaatttagctcgtagaatctctatcacttcttgg 45150000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 44305020 - 44304854
Alignment:
Q  2 acgaatttcaaagattgggttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||  |||  ||||||||||||| ||||| ||||||||||||||||||||||||  || || ||||    |||||| |||||||| ||||||    
T  44305020 acgaatttcaacaattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagggaaaagattacaactaaatgattatgattgaaa 44304921  T
Q  101 tttaacccctt-acctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctcta 166  Q
    | ||||||||| || ||||| ||||||||||||||||||| |||||| | |||||||||||||||||    
T  44304920 tctaacccctttacttcaataagcaataatcctagcaaaagcttcaagtaagctcctaaaatctcta 44304854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 46474266 - 46474419
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| |||| |||| ||| |||||||||||| ||  || || ||||    ||||||||||||||| ||||||| ||||||| ||| |||||| ||||    
T  46474266 aataatcacttactcaattaaacacttatgcatataattagggaaaagattacaactaagtgattatgattgaaatctaaccccattatctcaataagca 46474365  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||||||| || |||||||||||||| ||||||||||||||||||||    
T  46474366 ataatcctagcaaaagctacaatttagctcctagaatctctatcacctcttggg 46474419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 33559963 - 33560063
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| | |||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  33559963 aactaattaattatgattgaaatctaacccccttacctcaattagcaataaccctagccaaagcttcaatttagctcctagaatctctatcacctcttgg 33560062  T
Q  178 g 178  Q
    |    
T  33560063 g 33560063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 9250755 - 9250852
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacc-ccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||||| ||||| |||||||||||||| |||||||| |||||||| ||||||||||||| ||| |||||||||||||||||    
T  9250755 aactaattgattatgattgaaatctaacctccttacctcaattaacaataatcgtagcaaaatcttcaatttagcttctagaatctctatcacctctt 9250852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 9319494 - 9319397
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacc-ccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||||| ||||| |||||||||||||| |||||||| |||||||| ||||||||||||| ||| |||||||||||||||||    
T  9319494 aactaattgattatgattgaaatctaacctccttacctcaattaacaataatcgtagcaaaatcttcaatttagcttctagaatctctatcacctctt 9319397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 39291525 - 39291450
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaa 76  Q
    |||||||||||||  || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  39291525 cacgaatttcaaaagttaggttcacaataatcacttattcaaataagtacttatgcatagaaaaagagagaagaaa 39291450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 4439100 - 4439198
Alignment:
Q  79 aactaagtgattatgcttgaaatttaac-cccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||||| |||| ||||| ||||||||||||| ||||||||| ||| ||||||||||||||||| |||||||| |||||||||    
T  4439100 aactaattgattatggttgaaatctaactcccttgcctcaattagcaacaatcctagccaaagcttcaatttagctcctagaatctctagcacctcttg 4439198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 157
Target Start/End: Complemental strand, 21675481 - 21675393
Alignment:
Q  70 gaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctccta 157  Q
    ||||||| |||||||||||||||| ||||| | ||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  21675481 gaagaaattaactaagtgattatgattgaattctaacccccttacatcaataagcaataatcctagcaaaagcttcaatttagctccta 21675393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 19070208 - 19070278
Alignment:
Q  106 ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  19070208 ccccttacctcaattggtaataatcctagcaaaaacttcaatttaactcctagaatttctatcacctcttg 19070278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 177
Target Start/End: Complemental strand, 39286109 - 39286009
Alignment:
Q  78 taactaagtgattatgcttgaaat-ttaaccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||| ||| |||||||| |||||||| ||||| || | |||||||    
T  39286109 taactaagtgattatgcttgaaatcttacccccttacctcaaaaagcaataattctagccaaagcttcaattaagctcctagaatctgtagctcctcttg 39286010  T
Q  177 g 177  Q
    |    
T  39286009 g 39286009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 21537719 - 21537628
Alignment:
Q  87 gattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||| ||||||||||||||| |||||||||| |||||||| |||||| ||| |||||||| |||||||| |||||||| | ||||||||    
T  21537719 gattatgattgaaatttaacccccttacctcaataagcaataaccctagccaaagcttcaattaagctcctagaatctctagctcctcttgg 21537628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 4446529 - 4446627
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||||| ||||||| ||||||| |||||||| ||||||||| ||| ||| |||||||||| || |||||||| |||||||||    
T  4446529 aactaattgattatggttgaaatctaacccccttacctccattagcaacaatcctagccaaagctttaatttagctcatagaatctctaccacctcttg 4446627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18151320 - 18151213
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaact-aactaagtgattatgcttgaa 99  Q
    |||||||||||| | ||  ||||||||||||| |||||||||||||| | ||||||||||  |||  ||||||||||| ||||||| ||||||| |||||    
T  18151320 cacgaatttcaacggttaagttcacaataatcacttattcaaataagaatttatgcatag--aaatggagaagaaactaaactaagagattatgattgaa 18151223  T
Q  100 atttaacccc 109  Q
    ||||||||||    
T  18151222 atttaacccc 18151213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 38424534 - 38424631
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacc-ccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| || ||||| ||||||| ||||| |||||||| | ||||||| |||||||||  |||||||||||||||||||| |||||| ||||||||||    
T  38424534 aactaattgtttatggttgaaatctaacctccttaccttagttagcaaaaatcctagcccaaacttcaatttagctcctagaatctccatcacctctt 38424631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2029160 - 2029252
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| || ||| ||||||| ||||||||    
T  2029160 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaaaattaactaaatgattatg 2029252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 13448751 - 13448659
Alignment:
Q  86 tgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||||| ||||| | ||||||| ||||||||||||| || |||||||||| ||| |||||||||| |||||| ||||||||||||||||||    
T  13448751 tgattatggttgaactctaacccccttacctcaattagtaaataatcctagccaaagcttcaatttaactcctagaatctctatcacctcttg 13448659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 15977854 - 15977679
Alignment:
Q  4 gaatttcaaagattgggttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagaga-gaagaaactaactaagtgattatgcttgaaat 101  Q
    |||||||||| |||  ||||| ||||||| ||||| |||| |||||||||||| ||||||  ||||| ||||  || ||||||   |||||| |||||||    
T  15977854 gaatttcaaacatttagttcataataatcacttatctcaattaagcacttatgtatagaattagagaagaagctac-aactaaaatattatgattgaaat 15977756  T
Q  102 ttaac-cccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
     || | ||||||| ||||| ||||||||||||||| ||| |||||||| |||||||| |||||||| | ||||||||    
T  15977755 ctatctcccttacttcaataagcaataatcctagccaaagcttcaattaagctcctagaatctctaactcctcttgg 15977679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 28390646 - 28390715
Alignment:
Q  108 ccttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||||||||||||||| |||||||| | ||| ||||||||||||||||| ||||||||||| ||||||    
T  28390646 ccttacctcaattagcaaataatcctaccgaaagcttcaatttagctcctagaatctctatcatctcttg 28390715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1937033 - 1936941
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  1937033 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 1936941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3049821 - 3049913
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  3049821 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 3049913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32494062 - 32493970
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  32494062 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 32493970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 16384001 - 16384098
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    ||||||| ||||||| ||||||| ||||||| ||||||   ||||||| |||||||||  || ||||||||||||||||| |||||| | ||||||||    
T  16384001 aactaagagattatgattgaaatctaacccccttaccttggttagcaaaaatcctagcccaagcttcaatttagctcctagaatctccaccacctctt 16384098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 126654 - 126746
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| || ||| ||  || ||||||| ||||||||    
T  126654 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaatagaaaaagaattaactaaatgattatg 126746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 14935705 - 14935761
Alignment:
Q  106 ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatc 162  Q
    |||||||||| ||||||||| |||||||||  |||||||||||||||||||| ||||    
T  14935705 ccccttaccttaattagcaaaaatcctagcccaaacttcaatttagctcctagaatc 14935761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 15363298 - 15363354
Alignment:
Q  106 ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatc 162  Q
    |||||||||| ||||||||| |||||||||  |||||||||||||||||||| ||||    
T  15363298 ccccttaccttaattagcaaaaatcctagcccaaacttcaatttagctcctagaatc 15363354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15516878 - 15516817
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  15516878 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 15516817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42056305 - 42056244
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  42056305 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 42056244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 111285 - 111193
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||| ||||||||||  |||||| ||||||   |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  111285 cacgaatttcaaatattgggttcatgataatcacttattttcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 111193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 14942318 - 14942402
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatc 162  Q
    |||||| |||||||| ||||| | ||||||| |||||| ||||||||| |||||||||  || || |||||||||||||| ||||    
T  14942318 aactaattgattatggttgaattctaacccccttaccttaattagcaaaaatcctagcccaagctacaatttagctcctagaatc 14942402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 15369911 - 15369995
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatc 162  Q
    |||||| |||||||| ||||| | ||||||| |||||| ||||||||| |||||||||  || || |||||||||||||| ||||    
T  15369911 aactaattgattatggttgaattctaacccccttaccttaattagcaaaaatcctagcccaagctacaatttagctcctagaatc 15369995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2190202 - 2190141
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||| ||  |||||| |||||||  |||| || ||||||||||||    
T  2190202 cacgaatttcaaagattgggtacatgataatcacttattctcataatcaattatgcatagaa 2190141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 28722425 - 28722522
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | ||||||| |||||| | ||| ||||||||| |||  |||||||| ||||||||||| |||| | | ||||||||    
T  28722425 aactaattgattatggttgaattctaacccccttaccttagttaacaataatccaagcccaaacttcactttagctcctagaatcaccaccacctctt 28722522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 19559601 - 19559775
Alignment:
Q  4 gaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaattt 103  Q
    ||||||||||  |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |    
T  19559601 gaatttcaaaagttgggtacataataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaattaactaattgattatgcttgaaatct 19559700  T
Q  104 aa-ccccttacctcaattagcaataatcctagcaaaaa-cttcaatttagctcctaaaatctctatcacctcttg 176  Q
    || ||||||||||||||||||||||||||||| ||||| |||||||||| ||| || ||||||||||| ||||||    
T  19559701 aacccccttacctcaattagcaataatcctagaaaaaagcttcaatttacctcttagaatctctatcatctcttg 19559775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 49071926 - 49072099
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||    ||||||| ||||||||||||||    
T  49071926 cacgaatttcaacggttgggttcacaatgatcacttattcaaataagcacttatgcatagaaaaagagagatga----aactaagagattatgcttgaaa 49072021  T
Q  101 tttaa-ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    | ||| |||| ||||||||| |||||||||| |||||||| |||||||| |||||||| |||||||| ||||||||||    
T  49072022 tctaacccccctacctcaataagcaataatcgtagcaaaagcttcaattaagctcctagaatctctaacacctcttgg 49072099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 54398647 - 54398799
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| ||||||||| |||||||||| ||||| ||  ||||| ||   || ||||||||||||||| |||| || ||||||| |||||||||||||||    
T  54398647 aataatcccttattcaattaagcacttaagcatacaattagagaaaaattac-aactaagtgattatgattgagatctaacccccttacctcaattagca 54398745  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  54398746 ataatcctagcaaaaacttcaatttagctcatagaatctctatcacctcttggg 54398799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 41916673 - 41916574
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  41916673 aactaattgattatgattgaaatctaaccccttacctcaattagcaataatcctaacaaaaatttcaatttagctcctagaatctctatcacctcttggg 41916574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 12133597 - 12133440
Alignment:
Q  22 tcacaataatctcttat-tcaaataagcacttatgcatagaaaaagaga-gaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaa 118  Q
    ||||||||||| ||||| |||||||||||||||||||| |||| || || ||||  || |||| || ||||||| ||||||| ||||||| |||||||||    
T  12133597 tcacaataatcacttatctcaaataagcacttatgcattgaaatagggaagaagctac-aacttagagattatgattgaaatctaacccccttacctcaa 12133499  T
Q  119 ttagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    | ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  12133498 taagcaataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 12133440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 13590082 - 13589904
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    ||||||||||||  |||  || || ||||||| |||||||||||||||||||||||||| ||  || || || |    ||||||||||||||| ||||||    
T  13590082 cacgaatttcaacaattaagtgcaaaataatcacttattcaaataagcacttatgcatataattagggaaaatattacaactaagtgattatgattgaaa 13589983  T
Q  101 tttaacccc--ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    | |||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||    
T  13589982 tctaaccccccttacctcaataagcaataatcctagcaaaagcttcaatttagctcctcgaatctttatcacctcttgg 13589904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 10237199 - 10237101
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||||| |||||| ||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  10237199 aactaagttattatgattgaaatctaacccccttacctcaattagcaaaaatcctagcaaaagcttcaatttaggtcctagaatctctatcacctcttg 10237101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 50219926 - 50219777
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| ||||||||| |||||||||| ||||| ||  || || ||   || |||||| |||||||| | ||||| ||||||| |||||||||||| ||    
T  50219926 aataatcacttattcaattaagcacttaagcatacaattagggaaaaattac-aactaattgattatgatcgaaatctaacccccttacctcaattaaca 50219828  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  50219827 ataatcctagcaaaaacttcaatttaactcctagaatctatatcacctctt 50219777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 47468279 - 47468179
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccc-cttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| |||||||| ||||||| |||||  ||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| |||||||||    
T  47468279 aactaattgattatggttgaaatctaaccatcttacctcaataagcaataatcctagcaaaagtttcaatttagctcctacaatctctattacctcttgg 47468180  T
Q  178 g 178  Q
    |    
T  47468179 g 47468179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 18236122 - 18236031
Alignment:
Q  88 attatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||||| ||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||| |||||||    
T  18236122 attatgattgaaatctaacccccttacctcaattagcaaaaatcctagcaaaagcttcaatttagcttctagaatctctatcacgtcttggg 18236031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 54363195 - 54363124
Alignment:
Q  106 ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  54363195 ccccttacctcaacaaacaataatcctagcaaaagcttcaatttagctcctaaaatctctatcacctcttgg 54363124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 28428066 - 28428167
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||| | ||||||| |||||||||||||||| |||||||||| |||||||||||||| |||||| |||||| |||||||||||    
T  28428066 aactaattgattatgattgaactctaacccccttacctcaattagcaaataatcctagctaaaacttcaatttaactcctagaatctccatcacctcttg 28428165  T
Q  177 gg 178  Q
    ||    
T  28428166 gg 28428167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 15213527 - 15213460
Alignment:
Q  106 ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctct 174  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  15213527 ccccttacctcaataagcaataatcctag-aaaagcttcaatttagctcctagaatctctatcacctct 15213460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 13442608 - 13442509
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||| | ||||||| ||||||||||||| || |||||||||| ||| ||||||||||||||||| ||||| ||||| ||||||    
T  13442608 aactaattgattatgattgaactctaacccccttacctcaattagtaaataatcctagccaaagcttcaatttagctcctagaatctttatcatctcttg 13442509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 40904865 - 40904766
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||||| ||||||| |||||| || |||||| |||||||||  ||| ||||||||||||||||| | ||||||||||||||||    
T  40904865 aactaattgattatggttgaaatctaacccccttacctgaagtagcaaataatcctagtcaaagcttcaatttagctcctagattctctatcacctcttg 40904766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 10375022 - 10375080
Alignment:
Q  251 atgaaatgaaatgaa-acctattttctctaaagacaagagtttatataggttcatctca 308  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||    
T  10375022 atgaaatgaaatgaagacctattttctctaaagacaagagtttatataggctcttctca 10375080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 5682543 - 5682452
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||| ||| ||| ||||||| ||||||||    
T  5682543 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-gaaaaaattaactaaatgattatg 5682452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14952001 - 14952093
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  14952001 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 14952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 19559852 - 19559910
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| || |||||    
T  19559852 atgaaatgaaatgaaaacctattttctctaaagacaagggtttatataggctcctctca 19559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 47468105 - 47468056
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatatagg 299  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  47468105 atgaaatgaaatgaaaacctattttctctaaagacaagggtttatatagg 47468056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34177656 - 34177598
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcata 59  Q
    |||||||||  |||||||| |||||||||||| ||||||||| ||||||||||| ||||    
T  34177656 cacgaattttcaagattggattcacaataatcacttattcaattaagcacttattcata 34177598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15272328 - 15272267
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  15272328 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 15272267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 38765023 - 38765120
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccc-cttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | |||||| ||||||| ||||||||  |||| ||||  |||||||||||||||||||| |||| | | ||||||||    
T  38765023 aactaattgattatggttgaattctaaccctcttaccttaattagcacaaatcatagcccaaacttcaatttagctcctagaatcaccaccacctctt 38765120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 41916499 - 41916450
Alignment:
Q  251 atgaaatgaaatgaaacct-attttctctaaagacaagagtttatatagg 299  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||||    
T  41916499 atgaaatgaaatgaaaacttattttctctaaagagaagagtttatatagg 41916450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 50219699 - 50219642
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||| |||||||||||||||||||| |||||| ||||| || |||||    
T  50219699 atgaaatgaaatgaaaacctattttctctaaagacaa-agtttacataggctcttctca 50219642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25119223 - 25119155
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    |||||||||  |||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  25119223 cacgaattttcaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 25119155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 5e-50; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 35 - 178
Target Start/End: Original strand, 29114642 - 29114786
Alignment:
Q  35 ttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatccta 133  Q
    |||| |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  29114642 ttatacaaataagcacttatgcatataattagagaaaagaaactaactaagtgattatgcttgaaatctaacccccttacctcaataagcaataatccta 29114741  T
Q  134 gcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  29114742 gcaaaagcttcaatttagctcctagaatctctatcacctcttggg 29114786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 18537020 - 18537171
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc-ttacctcaattagc 123  Q
    ||||||| || ||||||||||||||||||||||||||  || ||  ||||| ||| ||||| ||||||| ||||||| ||||||| |||||||||| |||    
T  18537020 aataatcactcattcaaataagcacttatgcatagaattaggga--agaaattaaactaagagattatgattgaaatctaacccccttacctcaataagc 18537117  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18537118 aataatcctagcaaaaacttcaatttagctcctagaatctctatcacctcttgg 18537171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 9637009 - 9637161
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaacta--actaagtgattatgcttgaaat-ttaaccccttacctcaattag 122  Q
    ||||||| |||||||||||||||||||| ||||| ||  ||   ||| ||| ||  ||||| |||||||| ||||||| ||| |||||||||||||||||    
T  9637009 aataatcacttattcaaataagcacttaagcatacaattag---gaaaaaattacaactaattgattatgattgaaatcttatccccttacctcaattag 9637105  T
Q  123 caataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9637106 caataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttggg 9637161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 9637238 - 9637390
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaacta--actaagtgattatgcttgaaat-ttaaccccttacctcaattag 122  Q
    ||||||| |||||||||||||||||||| ||||| ||  ||   ||| ||| ||  ||||| |||||||| ||||||| ||| |||||||||||||||||    
T  9637238 aataatcacttattcaaataagcacttaagcatacaattag---gaaaaaattacaactaattgattatgattgaaatcttatccccttacctcaattag 9637334  T
Q  123 caataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9637335 caataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttggg 9637390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 9637467 - 9637619
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaacta--actaagtgattatgcttgaaat-ttaaccccttacctcaattag 122  Q
    ||||||| |||||||||||||||||||| ||||| ||  ||   ||| ||| ||  ||||| |||||||| ||||||| ||| |||||||||||||||||    
T  9637467 aataatcacttattcaaataagcacttaagcatacaattag---gaaaaaattacaactaattgattatgattgaaatcttatccccttacctcaattag 9637563  T
Q  123 caataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9637564 caataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttggg 9637619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 6094950 - 6095101
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||| ||||| ||  || || ||   || ||||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  6094950 aataatcacttattcaaataagcacttaagcatacaattagggaaaaattac-aactaagtgattatgattgaaatctaacccccttacctcaataagca 6095048  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  6095049 ataatcctagcaaaaatttcaatttagctcgtagaatctctatcacctcttgg 6095101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 25595284 - 25595436
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc--ttacctcaattag 122  Q
    ||||||| |||| ||| ||||||||||||||||||||  || ||  ||||| ||| ||||| ||||||| ||||||| |||||||  |||||||||| ||    
T  25595284 aataatcacttagtcacataagcacttatgcatagaattaggga--agaaattaaactaagagattatgattgaaatctaaccccccttacctcaataag 25595381  T
Q  123 caataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  25595382 caataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 25595436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 9637696 - 9637848
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaacta--actaagtgattatgcttgaaat-ttaaccccttacctcaattag 122  Q
    ||||||| |||||||||||||||||||| ||||| ||  ||   ||| ||| ||  ||||| |||||||| ||||||| ||| |||||||||||||||||    
T  9637696 aataatcacttattcaaataagcacttaagcatacaattag---gaaaaaattacaactaattgattatgattgaaatcttatccccttacctcaattag 9637792  T
Q  123 caataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||| ||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  9637793 caattatcctagcaaaagtttcaatttagctcctagaatctctatcacctcttggg 9637848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 24278076 - 24278176
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| |||||||| ||||||| ||||||| |||||| |||||| |||||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  24278076 aactaattgattatgattgaaatctaacccccttaccttaattagaaataatcctagccaaagcttcaatttagctcctagaatctctatcacctcttgg 24278175  T
Q  178 g 178  Q
    |    
T  24278176 g 24278176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7321756 - 7321847
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattat 92  Q
    |||||||||||||  |||||||||||||| || ||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||    
T  7321756 cacgaatttcaaaagttgggttcacaatagtcacttattcaaataagcacgtatgcataggaaaagagagtagaaattaactaagtgattat 7321847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 16292732 - 16292633
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||| | ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  16292732 aactaattgattatggttgaactctaacccccttacctcaattagcaaataatcctagccaaaacttcaatttagctcctagaatctctaacacctcttg 16292633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 20279757 - 20279828
Alignment:
Q  106 ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||| ||||||||||||||||||| |||||||| |||||| | |||||||||| || |||||    
T  20279757 ccccttacctcaataagcaataatcctagcaaaagcttcaattaagctccgagaatctctatctccccttgg 20279828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22274961 - 22275053
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  22274961 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 22275053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 9637922 - 9637980
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| || |||||    
T  9637922 atgaaatgaaatgaaaacctattttcgctaaagacaagagtttatataggctcctctca 9637980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9652912 - 9652846
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaaga 67  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||    
T  9652912 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaaga 9652846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21274065 - 21274004
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  21274065 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 21274004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25213287 - 25213348
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  25213287 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 25213348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 295
Target Start/End: Original strand, 6095177 - 6095217
Alignment:
Q  256 atgaaatgaaa-cctattttctctaaagacaagagtttata 295  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  6095177 atgaaatgaaaacctattttctctaaagacaagagtttata 6095217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15633453 - 15633545
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||||| |||||  ||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||||||||||||    
T  15633453 cacgaaattcaagaattgggttcattataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaagtgattatg 15633545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22284194 - 22284286
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||||||||||||||||| |||||  |||||| |||||||  |||| ||  ||||||||||| |||||| ||  || ||||||| ||||||||    
T  22284194 cacgaatttcaaagattgagttcatgataatcacttattctcataatcaaatatgcatagaacaagagaaaaagaattaactaaatgattatg 22284286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 5e-47; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 18970160 - 18970335
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaa 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  18970160 cacgaatttcaaagattgggttcataataatcacttattcaaataatcacttatgcatagaaaaagagaaaagaaactaactaagtggttatgattgaaa 18970259  T
Q  101 tttaa-ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    | ||| |||||||||| | ||||||  |||||||||  |||| ||||||||||||||| |||| | | ||||||||    
T  18970260 tctaacccccttaccttagttagcacaaatcctagcccaaacatcaatttagctcctagaatcaccaccacctctt 18970335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 43427496 - 43427345
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| ||||||||| |||||||||||||||| ||  || || ||   || ||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  43427496 aataatcacttattcaattaagcacttatgcatacaattag-gaaaaattac-aactaagtgattatgattgaaatctaacccccttacctcaattagca 43427399  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43427398 ataatcctagcaaaaacttcaatttagctcctagaatctctatcacctcttggg 43427345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 40038901 - 40038764
Alignment:
Q  38 ttcaaataagcacttatgcatagaaaaagag-agaagaaactaactaagtgattatgcttgaaatttaaccccttacctcaattagcaataatcctagca 136  Q
    ||||| |||||||||||||||||||  || | |||||  || ||||||| ||||||| ||||||| ||||||| ||||||||| ||||||||||||||||    
T  40038901 ttcaattaagcacttatgcatagaattagggtagaagctac-aactaagagattatgattgaaatctaaccccctacctcaataagcaataatcctagca 40038803  T
Q  137 aaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  40038802 aaaacttcaatttagctcctagaatctctatcacctctt 40038764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 38375704 - 38375528
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaa 99  Q
    ||||||||||||  |||  || || ||||||| || ||||||||||||||||||||||||||  || ||  ||||| ||| |||||  |||||| |||||    
T  38375704 cacgaatttcaacaattaagtgcaaaataatcactcattcaaataagcacttatgcatagaattaggga--agaaattaaactaagatattatgattgaa 38375607  T
Q  100 atttaaccc-cttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    || |||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38375606 atctaactctcttacctcaataagcaataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 38375528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 10913150 - 10913301
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc-ttacctcaattagc 123  Q
    ||||||| |||||||| |||||||||||||||||||   || ||  ||||| ||| ||||| ||||||| ||||||| ||||||| ||| |||||| |||    
T  10913150 aataatcacttattcacataagcacttatgcatagatttaggga--agaaattaaactaagagattatgattgaaatctaacccccttatctcaataagc 10913247  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  10913248 aataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 10913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 17758597 - 17758438
Alignment:
Q  21 ttcacaataatctcttatt-caaataagcacttatgcatagaaaaagag-agaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctca 117  Q
    |||| ||||||| |||||| ||| |||||||||||||||||||  || | |||||  || |||||||  |||||| ||||||| ||||||| ||||||||    
T  17758597 ttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctac-aactaagatattatgattgaaatctaacccccttacctca 17758499  T
Q  118 attagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  17758498 attagcaataatcctagcaaaagcttcaatttggctcctagaatctctatcacctcttggg 17758438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 19059917 - 19059758
Alignment:
Q  21 ttcacaataatctcttatt-caaataagcacttatgcatagaaaaagag-agaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctca 117  Q
    |||| ||||||| |||||| ||| |||||||||||||||||||  || | |||||  || |||||||  |||||| ||||||| ||||||| ||||||||    
T  19059917 ttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctac-aactaagatattatgattgaaatctaacccccttacctca 19059819  T
Q  118 attagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  19059818 attagcaataatcctagcaaaagcttcaatttggctcctagaatctctatcacctcttggg 19059758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 25103966 - 25103823
Alignment:
Q  35 ttattcaaataagcacttatgcatagaaaaag-agagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcct 132  Q
    |||| |||||||||||||||||||||||  || | |||||  || |||||| |||||||| ||||||| ||||||| |||||||||| ||||||||||||    
T  25103966 ttatacaaataagcacttatgcatagaattaggatagaagctac-aactaaatgattatgattgaaatctaacccccttacctcaataagcaataatcct 25103868  T
Q  133 agcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    || |||| |||||||||||||| || |||||||||||||||||||    
T  25103867 agtaaaagcttcaatttagctcatagaatctctatcacctcttgg 25103823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 31411569 - 31411470
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||||||||||    
T  31411569 aactaattgattatgattgaaatctaacccccttacctcaattagcaataatcctagcaaaagcttcaatttaactcttagaatctctatcacctcttgg 31411470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15550837 - 15550929
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||| ||| |||||| ||||| ||||||||||||||||    
T  15550837 cacgaatttcaaaagttgggttcacaataatcacttattcaaattagcacttatgcataaaaagagagagtagaaattaactaagtgattatg 15550929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 11638614 - 11638713
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||| | ||||||| |||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  11638614 aactaattgattatggttgaactctaacccccttacctcaattagcaaataatcctagccaaagcttcaatttagctcctagaatctctatcacctcttg 11638713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 41661887 - 41661979
Alignment:
Q  86 tgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||||| || || ||||||||| |||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  41661887 tgattatgattaaactttaacccccttacctcaattagcaaataatcctagccaaagcttcaatttagctcctagaatctctatcacctcttg 41661979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 176
Target Start/End: Complemental strand, 37915263 - 37915125
Alignment:
Q  39 tcaaataagcacttatgcatagaaaaagaga-gaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagca 136  Q
    |||||||| ||| |||||||||||| || || ||||  || |||| || ||||||| |||| || ||||||| |||||||||| | |||||||| |||||    
T  37915263 tcaaataaacacctatgcatagaaatagggaagaaggtac-aacttagagattatgattgacatctaacccccttacctcaataaacaataatcatagca 37915165  T
Q  137 aaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    ||||||||||||||||||||| |||  |||||||||||||    
T  37915164 aaaacttcaatttagctcctagaataactatcacctcttg 37915125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 50313564 - 50313629
Alignment:
Q  112 acctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  50313564 acctcaattagcaaataatcctagccaaaacttcaatttagctcctggaatctctatcacctcttg 50313629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 48421819 - 48421874
Alignment:
Q  4 gaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcata 59  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  48421819 gaatttcaaagattgggttcacaataatcacttattcaattaagcacttattcata 48421874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 8605141 - 8605239
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccccttacctcaattagcaat-aatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    ||||| ||||||||| ||||| | |||| | |||||| |||||||||| ||||||||| ||| ||||||||||||||||| | |||||| |||||||||    
T  8605141 aactatgtgattatgattgaactctaactctttaccttaattagcaattaatcctagccaaagcttcaatttagctcctagattctctaacacctcttg 8605239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 12539056 - 12538906
Alignment:
Q  22 tcacaataatctcttat-tcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaat 119  Q
    ||||||||||| ||||| |||||| |||||||||||| ||||  ||| |  |||    ||||||| |||||||  |||||| ||||||| ||||  ||||    
T  12539056 tcacaataatcacttatctcaaatgagcacttatgcaaagaattagataagagattacaactaagagattatgaatgaaatctaacccccttactgcaat 12538957  T
Q  120 tagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcac 170  Q
     | ||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  12538956 aaacaataatcctagcaaaagcttcaatttagttcctaaaatatctatcac 12538906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 21167012 - 21166914
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| | |||||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| |||||||| | ||| || |||||||||||| |||||    
T  21167012 aactaattaattatgattgaactttaacccccttacctcaattagcaataatcatagccaaagcttcaattcatctcttagaatctctatcacatcttg 21166914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 4162137 - 4162040
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | ||||||| |||||| | ||||||| |||||||||  |||||||||||||||||||| |||||| | ||||||||    
T  4162137 aactaattgattatggttgaactctaacccccttaccttagttagcaaaaatcctagcccaaacttcaatttagctcctagaatctccaccacctctt 4162040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7854221 - 7854313
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  7854221 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 7854313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 45581870 - 45581962
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  45581870 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 45581962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 6225017 - 6224920
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccc-cttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | |||||| ||||||| | ||||||| ||||||| || || ||||||||||||||||| |||||| | ||||||||    
T  6225017 aactaattgattatggttgaattctaaccctcttaccttagttagcaaaaatcctaacacaagcttcaatttagctcctagaatctccaccacctctt 6224920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11402829 - 11402890
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||  |||  ||||||||||||| ||||||||||||||||||| |||||||||    
T  11402829 cacgaatttcaacaattaagttcacaataatcacttattcaaataagcacttgtgcatagaa 11402890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 23492615 - 23492704
Alignment:
Q  4 gaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  23492615 gaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 23492704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2844430 - 2844498
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  2844430 cacgaatttcaaagattgggttcatgataatcgcttattcccataatcaattatgcatagaataagaga 2844498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17956000 - 17955908
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| |  |||||||||||| |||||| ||  || ||||||| ||||||||    
T  17956000 cacgaatttcaaagattgggttcatgataatcacttattctcataatcgattatgcatagaacaagagaaaaagaattaactaaatgattatg 17955908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30153181 - 30153249
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  30153181 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 30153249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33342120 - 33342188
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  33342120 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 33342188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 54685317 - 54685249
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  54685317 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 54685249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 55513109 - 55513201
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| ||||||   |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  55513109 cacgaatttcaaagattgggttcatgataatcacttatttccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 55513201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 38168154 - 38168221
Alignment:
Q  2 acgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    |||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  38168154 acgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 38168221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 31411394 - 31411345
Alignment:
Q  251 atgaaatgaaatgaa-acctattttctctaaagacaagagtttatatagg 299  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  31411394 atgaaatgaaatgaagatctattttatctaaagacaagagtttatatagg 31411345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 33368860 - 33368763
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | ||||||| ||||||   ||||||  ||||||||| ||||||||||||||||||||| |||| | | ||||||||    
T  33368860 aactaattgattatggttgaattctaacccccttacctttgttagcacaaatcctagccaaaacttcaatttagctcctagaatcaccaccacctctt 33368763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53771280 - 53771341
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  53771280 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 53771341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 11515474 - 11515438
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||| |||||||||||||||||||||||||||||    
T  11515474 aataatcacttattcaaataagcacttatgcatagaa 11515438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28558410 - 28558502
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||| ||||||  |||||| |||||||  |||| || |||||||| ||| |||||| ||  || ||||||| ||||||||    
T  28558410 cacgaatttcaaagattaggttcatgataatcacttattctcataatcaattatgcatggaacaagagaaaaagaattaactaaatgattatg 28558502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 14814697 - 14814600
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | ||||||| |||||| | ||||||| |||||||||  || ||| ||||||||||||| |||| | | ||||||||    
T  14814697 aactaattgattatggttgaattctaacccccttaccttagttagcaaaaatcctagccgaagcttaaatttagctcctagaatcaccaccacctctt 14814600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16261692 - 16261753
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||| ||||||||    
T  16261692 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattacgcatagaa 16261753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 17393759 - 17393808
Alignment:
Q  87 gattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagc 135  Q
    ||||||| ||||||| ||||||| |||||||||| |||||||||||||||    
T  17393759 gattatgattgaaatctaacccccttacctcaataagcaataatcctagc 17393808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 17758348 - 17758305
Alignment:
Q  264 aaacctattttctctaaagacaagagtttatataggttcatctca 308  Q
    ||||||||||||||||| |||||||||||||||||| || |||||    
T  17758348 aaacctattttctctaa-gacaagagtttatataggctcttctca 17758305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 19059668 - 19059625
Alignment:
Q  264 aaacctattttctctaaagacaagagtttatataggttcatctca 308  Q
    ||||||||||||||||| |||||||||||||||||| || |||||    
T  19059668 aaacctattttctctaa-gacaagagtttatataggctcttctca 19059625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 50313716 - 50313756
Alignment:
Q  259 aaatgaaacctattttctctaaagacaagagtttatatagg 299  Q
    ||||||||| |||||||||| |||||||| |||||||||||    
T  50313716 aaatgaaacatattttctcttaagacaagggtttatatagg 50313756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 54038140 - 54038048
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||| ||||| |||| |||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  54038140 cacgaatgtcaaacattgagttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 54038048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 863 - 711
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||||| ||||||   | || ||||    ||||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  863 aataatcacttattcaaataagcacttatgtatagaattggggaaaagattacaactaagtgattatgattgaaatctaacccccttacctcaataagca 764  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  763 ataatcctagcaaaagcttcaatttagctcctagaatctctatctcctcttgg 711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 6147 - 6283
Alignment:
Q  42 aataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaa 140  Q
    ||||| ||||||||||||||||| ||||||||||||||||| || ||||| ||||||||| ||||||  |||||||||| |||||||||||||||||||     
T  6147 aataatcacttatgcatagaaaaggagagaagaaactaacttagagattacgcttgaaatctaaccctgttacctcaataagcaataatcctagcaaaag 6246  T
Q  141 cttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||| |||||||| |||||||| | ||||||||    
T  6247 cttcaattaagctcctagaatctctagctcctcttgg 6283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 6360 - 6410
Alignment:
Q  251 atgaaatgaaatgaaa-cctatttt-ctctaaagacaagagtttatatagg 299  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  6360 atgaaatgaaatgaaaacctatttttctctaaagacaagagtttatatagg 6410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 19943 - 19766
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagagagaagaaacta-actaagtgattatgcttga 98  Q
    ||||||||||||  |||  ||||||||||||| ||||| |||||||| |||||||||||||||  || ||  ||||| || |||||| ||||||| ||||    
T  19943 cacgaatttcaacaattaagttcacaataatcacttatctcaaataaacacttatgcatagaattaggga--agaaattagactaagagattatgattga 19846  T
Q  99 aatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  19845 aatctaacccccttacctcaataagcaaaaatcctagcaaaaacttcaatttagctcctagaatctctattacctcttgg 19766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 67940 - 67788
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc--ttacctcaattag 122  Q
    ||||||| || ||||||||||||||||||||||||||  || ||  ||||| ||| ||||| ||||||| ||||||| |||||||  |||||||||| ||    
T  67940 aataatcactcattcaaataagcacttatgcatagaattaggga--agaaattaaactaagagattatgattgaaatctaaccccccttacctcaataag 67843  T
Q  123 caataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  67842 caataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 67788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 132129 - 132228
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||||| ||||||| |||||||||||||||| ||||| |||| ||  ||||||||||||||||| ||||||||||||||||||    
T  132129 aactaattgattatgattgaaatctaacccccttacctcaattagcaaataatcatagccaacgcttcaatttagctcctagaatctctatcacctcttg 132228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 19874025 - 19874177
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||||||||| ||  || || ||||    ||||||||||||||| | ||||| ||||||| |||||||||| | ||    
T  19874025 aataatcacttattcaaataagcacttatgcatataattagggaaaagattacaactaagtgattatgatggaaatctaacccccttacctcaataaaca 19874124  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  19874125 ataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 19874177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 23417481 - 23417657
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaa 99  Q
    ||||||||||||  |||  || || ||||||| |||||||||||||||||||||||||||||  || ||  ||||| ||| ||||| ||||||| |||||    
T  23417481 cacgaatttcaacaattaagtgcaaaataatcacttattcaaataagcacttatgcatagaattaggga--agaaattaaactaagagattatgattgaa 23417578  T
Q  100 atttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    || ||||||| |||||||||| || |||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  23417579 atataacccccttacctcaataagaaataatcctagcaaaaacttcaatttagctcctcgaatctttatcacctcttgg 23417657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 11763487 - 11763335
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc-ttacctcaattagc 123  Q
    ||||||| |||||||||||||||||||||||||| ||  || ||||||||| ||| ||||  |||||||  |||||| ||||||| |||||||||| |||    
T  11763487 aataatcacttattcaaataagcacttatgcatataattag-gagaagaaattaaactaaaggattatgaatgaaatctaacccccttacctcaataagc 11763389  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    || ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  11763388 aacaatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 11763335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 23234468 - 23234313
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaact---aactaagtgattatgcttgaaatttaa-ccccttacctcaatta 121  Q
    ||||||| |||||||||||||||||||| ||||| ||  ||| | || ||| |   ||||||||||||||| |||||||  || |||||||||||||| |    
T  23234468 aataatcacttattcaaataagcacttaagcatacaattagaaaaaaaaaaattacaactaagtgattatgattgaaatcaaatccccttacctcaataa 23234369  T
Q  122 gcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  23234368 gcaataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 23234313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 26559746 - 26559647
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    |||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  26559746 aactaattgattataattgaaatctaaccccttacctcaattagcaataatcctagctaaaacatcaatttagctcctagaatctctatcacctcttggg 26559647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 174
Target Start/End: Complemental strand, 16835282 - 16835133
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||||||||| ||  || || ||||    ||||||||||||||| ||||||| ||||||| |||||||| | || |    
T  16835282 aataatcacttattcaaataagcacttatgcatataattagggaaaagattacaactaagtgattatgattgaaatctaacccccttacctcagtaagaa 16835183  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctct 174  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  16835182 ataatcctaacaaaagcttcaatttagctcctagaatctctatcacctct 16835133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 21110066 - 21110166
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacc-ccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||    
T  21110066 aactaagtgattatgattgaaatctaacctccttacctcaattagcaataatcctagccaaagcttcaatttagctcctagaatctctgtcacctcttgg 21110165  T
Q  178 g 178  Q
    |    
T  21110166 g 21110166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 5621725 - 5621627
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| | |||||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| |||||||| | ||| || |||||||||||| |||||    
T  5621725 aactaattaattatgattgaactttaacccccttacctcaattagcaataatcatagccaaagcttcaattcatctcttagaatctctatcacatcttg 5621627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25005055 - 25005113
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcata 59  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||||||| ||||    
T  25005055 cacgaatttcaaagattgggttcacaataatcacttattcaattgagcacttattcata 25005113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 11342924 - 11343016
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  11342924 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 11343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 22885946 - 22886025
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctccta 157  Q
    |||||| |||||||| ||||||| ||||||| |||||||||||||||  |||||||||  || |||||||||||||||||    
T  22885946 aactaattgattatggttgaaatctaacccccttacctcaattagcacaaatcctagcctaagcttcaatttagctccta 22886025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2032049 - 2032117
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  2032049 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 2032117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21205165 - 21205233
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  21205165 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 21205233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22662691 - 22662632
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctctta-ttcaaataagcacttatgcata 59  Q
    |||||||||||||||||||||||||||||||| |||| ||||| ||| ||||||| ||||    
T  22662691 cacgaatttcaaagattgggttcacaataatcacttatttcaattaaacacttattcata 22662632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 6456936 - 6457033
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||||| ||||||| ||| || | ||||||| ||||||| |  || ||||||||||||||||| |||||| | ||||||||    
T  6456936 aactaattgattatggttgaaatctaacccccttatcttagttagcaaaaatcctaacccaagcttcaatttagctcctagaatctccaccacctctt 6457033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16105882 - 16105943
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  16105882 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 16105943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 26559571 - 26559522
Alignment:
Q  251 atgaaatgaaatgaa-acctattttctctaaagacaagagtttatatagg 299  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  26559571 atgaaatgaaatgaagacctattttctcttaagacaagggtttatatagg 26559522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 23234249 - 23234209
Alignment:
Q  268 ctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  23234249 ctattttctctaaagacaagagtttatataggctcttctca 23234209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 21110244 - 21110291
Alignment:
Q  253 gaaatgaaatgaa-acctattttctctaaagacaagagtttatatagg 299  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  21110244 gaaatgaaatgaagacctattttctcttaagacaagggtttatatagg 21110291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21650934 - 21651002
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| ||  |||||| |||| ||||||    
T  21650934 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaactatgcacagaacaagaga 21651002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 33397609 - 33397761
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||||||||| ||  |  || ||||   |||||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  33397609 aataatcacttattcaaataagcacttatgcatataattaaggaaaagattataactaagtgattatgattgaaatctaacccccttacctcaataagca 33397708  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||  ||| |||||||||||| |||||||||||||||||||    
T  33397709 ataatcctagcaaaaggttcgatttagctcctagaatctctatcacctcttgg 33397761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 25094123 - 25094272
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||||||||||| |  || |||  | |   |||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  25094123 aataatcacttattcaaataagcacttatgcatagatagggaaagattaca---actaagtgattatgattgaaatctaacccccttacctcaataagca 25094219  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  25094220 ataatcctagcaaaagcttcaatttagctcctagaatctctatcacttcttgg 25094272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 20194290 - 20194438
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacc-ccttacctcaattagca 124  Q
    |||||||  ||||||||||||||||||||||||||||  || || ||||    ||||||||||||||| ||||| | ||||  |||||||||||| ||||    
T  20194290 aataatcatttattcaaataagcacttatgcatagaattagggaaaagattacaactaagtgattatgattgaagtctaacttccttacctcaataagca 20194389  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctc 173  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  20194390 ataatcctagcaaaagcttcaatttagctcctagaatctctatcacctc 20194438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 20836744 - 20836841
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    ||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  20836744 aactaagtgattatgattgaaatctaacccccttacctcaataagcaataatcctagcaaaagcttcaatttagctcctagaatctctatcacctctt 20836841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 20822896 - 20823039
Alignment:
Q  35 ttattcaaataagcacttatgcatagaaaaagagag-aagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcct 132  Q
    |||| |||||||||||||||||||||||  || | | |||  || ||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||    
T  20822896 ttatacaaataagcacttatgcatagaattagggtggaagctac-aactaagtgattatgattgaaatctaacccccttacctcaataagcaataatcct 20822994  T
Q  133 agcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
     |||||| ||||||||||||||||| |||||||||||||||||||    
T  20822995 tgcaaaagcttcaatttagctcctagaatctctatcacctcttgg 20823039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 76401 - 76250
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccc-ttacctcaattagc 123  Q
    ||||||| |||||||||||||||| |||||| |||||  || ||  ||||| ||| ||||| ||||||| ||||||| ||||||| |||||||||| |||    
T  76401 aataatcacttattcaaataagcaattatgcttagaattaggga--agaaattaaactaagagattatgattgaaatctaacccccttacctcaataagc 76304  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||| |||||||| |||||||||| |||||| |||||||||||||||||||    
T  76303 aataatcatagcaaaagcttcaatttaactcctagaatctctatcacctcttgg 76250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 18852726 - 18852550
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga-gaagaaactaactaagtgattatgcttgaa 99  Q
    |||||||||||| ||||  || ||| |||||| |||||||||||||||||||||||||| |   || || ||||  || ||||||  ||||||| |||||    
T  18852726 cacgaatttcaacgattaagtacacgataatcacttattcaaataagcacttatgcatatatttagggaagaagctac-aactaaa-gattatgattgaa 18852629  T
Q  100 atttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    || ||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  18852628 atctaacccccttacctcaataaacaataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 18852550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 40436252 - 40436100
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||||||||| ||  |  || ||||   ||| ||||||||| || ||||||| ||||||| |||||||||| | ||    
T  40436252 aataatcacttattcaaataagcacttatgcatataattaaggaaaagattataattaagtgattgtgattgaaatctaacccccttacctcaataaaca 40436153  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||  ||||||||||||| || |||||||||||||||||||    
T  40436152 ataatcctagcaaaagtttcaatttagctcatagaatctctatcacctcttgg 40436100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 5768100 - 5768000
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| |||||||| ||||||| ||||||| ||||||||||||||||  |||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  5768100 aactaattgattatgattgaaatctaacccccttacctcaattagcaaatatcctagcaaaaactttaatttagctcctagaatctctatcacttcttgg 5768001  T
Q  178 g 178  Q
    |    
T  5768000 g 5768000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 44034984 - 44034895
Alignment:
Q  4 gaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    |||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  44034984 gaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 44034895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 49997213 - 49997116
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | ||||||| |||||| | ||||||| |||||||||  |||||||||||||||||||| |||| | | ||||||||    
T  49997213 aactaattgattatgtttgaattctaacccccttaccttagttagcaaaaatcctagctcaaacttcaatttagctcctagaatcaccaccacctctt 49997116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 52400946 - 52401043
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccc-cttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | |||||| ||||||| | ||||||| |||||||||  || ||||||||||||||||| |||||| | ||||||||    
T  52400946 aactaattgattatggttgaattctaaccctcttaccttagttagcaaaaatcctagcccaagcttcaatttagctcctagaatctccaccacctctt 52401043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15861442 - 15861374
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  15861442 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 15861374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 21860251 - 21860318
Alignment:
Q  2 acgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    |||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  21860251 acgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 21860318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 21195329 - 21195426
Alignment:
Q  79 aactaagtgattatgcttgaaatttaa-ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | ||| |||||||||| | ||||||  |||||||||  || ||||| ||||||||||| |||| | ||||||||||    
T  21195329 aactaaatgattatgattgaattctaaaccccttaccttagttagcacaaatcctagcccaagcttcactttagctcctagaatcaccatcacctctt 21195426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 2755 - 2603
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccct-tacctcaattagca 124  Q
    ||||||| |||||||||||||||| ||||||||| ||  || || ||||    ||||||||||||||| ||||||| |||||||  ||||||||  ||||    
T  2755 aataatcacttattcaaataagcagttatgcatataattagggaaaagattacaactaagtgattatgattgaaatataacccccgtacctcaacaagca 2656  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  2655 ataatcctagcaaaagcttcaatttagctcctataatctctatcacctcttgg 2603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 33421 - 33245
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaa 99  Q
    ||||||||||||| |||  || || ||||||| || ||||||||||||||||||||||||||  || ||  ||||| ||| ||||| ||||||| |||||    
T  33421 cacgaatttcaaaaattaagtacaaaataatcactcattcaaataagcacttatgcatagaattaggga--agaaattaaactaagagattatgattgaa 33324  T
Q  100 atttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    || ||||||| |||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||    
T  33323 atctaacccccttacctcaataagaaataatcctagcaaaagcttcaatttagttcctagaatctatatcacctcttgg 33245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 7658 - 7506
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaa-ccccttacctcaattagca 124  Q
    ||||||| |||||||||||||||||||| ||||| ||  || || ||   || ||||||||||||||| ||||||| ||| |||||| ||||||| ||||    
T  7658 aataatcacttattcaaataagcacttaagcatacaattagggaaaaattac-aactaagtgattatgattgaaatctaaacccctttcctcaataagca 7560  T
Q  125 ataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  7559 ataatcctagcaaaagcttcaatttagctcttagaatctctatcacctcttggg 7506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 7430 - 7372
Alignment:
Q  251 atgaaatgaaatgaaacc-tattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||| | ||||||||||||||| || |||||||||||| || |||||    
T  7430 atgaaatgaaatgaaaacatattttctctaaagaaaatagtttatataggctcctctca 7372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 113978 - 114116
Alignment:
Q  26 aataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaaccccttacctcaattagcaa 125  Q
    ||||||| |||||||||||||||||||||||||| ||  |  || ||||   |||||||||||||||| ||||||| |||||| |||||||||| |||||    
T  113978 aataatcacttattcaaataagcacttatgcatataattaaggaaaagattataactaagtgattatgattgaaatctaacccgttacctcaataagcaa 114077  T
Q  126 taatcctagcaaaaacttcaatttagctcctaaaatctc 164  Q
    || | ||||||||| ||||||||||||||||| ||||||    
T  114078 tatttctagcaaaagcttcaatttagctcctagaatctc 114116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 7061 - 6910
Alignment:
Q  27 ataatctcttat-tcaaataagcacttatgcatagaaaaagagagaagaaactaa-ctaagtgattatgcttgaaatttaacccctt-acctcaattagc 123  Q
    |||||| ||||| ||||||||||||||| ||||||||  || ||  ||||| ||| ||||| ||||||| ||||||| ||||||||| |||||||| |||    
T  7061 ataatcacttatctcaaataagcacttaagcatagaattaggga--agaaattaaactaagagattatgattgaaatataacccctttacctcaataagc 6964  T
Q  124 aataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||| ||||    
T  6963 aataatcctagcaaaagcttcaatttagctcctaggatctctatcaccttttgg 6910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 6833 - 6784
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatatagg 299  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  6833 atgaaatgaaatgaaaacctatttttcctaaagacaagagtttatatagg 6784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 8806 - 8903
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| ||||    
T  8806 aactaattgattatgattgaaatctaacccccttacctcaattagcaataatcctagcaaaagcttcaattgagctcctataatctctatcacttctt 8903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 8986 - 9042
Alignment:
Q  251 atgaaatgaaatgaaacctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| || |||||    
T  8986 atgaaatgaa-tgaaacctattttctctaaagacaagggtttatataggctcctctca 9042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 12592 - 12433
Alignment:
Q  20 gttcacaataatctcttat-tcaaataagcacttatgcatagaaaaag-agagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctc 116  Q
    ||||| ||||||| ||||| ||||||| ||||||||||||||||  || | |||||  || ||||||| ||||||| ||||||| ||||||| |||||||    
T  12592 gttcataataatcacttatctcaaatatgcacttatgcatagaattaggaaagaagctac-aactaagagattatgattgaaatctaaccccattacctc 12494  T
Q  117 aattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||| ||||||||||||||||||| |||||||| |||||||| |||||||| | ||||||||    
T  12493 aataagcaataatcctagcaaaagcttcaattaagctcctagaatctctagctcctcttgg 12433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 8e-24; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 27813 - 27913
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| |||||||| ||||||| ||||||| |||||| ||||||||||||||||||| ||| || |||||||| ||||| |||||||||||||||||||    
T  27813 aactaattgattatgattgaaatctaacccccttaccttaattagcaataatcctagccaaagctgcaatttagatcctagaatctctatcacctcttgg 27912  T
Q  178 g 178  Q
    |    
T  27913 g 27913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 86672 - 86771
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||| |||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||||  |||||||||||||||| | |||||||||| ||||||    
T  86672 aactaattgattatgattgaaatctaacccccttaccttaattagcaataatcctaacaaaagtttcaatttagctcctagattctctatcacatcttgg 86771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 27988 - 28046
Alignment:
Q  251 atgaaatgaaatg-aaacctattttctctaaagacaagagtttatataggttcatctca 308  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||| || |||||    
T  27988 atgaaatgaaatgtaaacctattttctcttaagacaagggtttatataggctcctctca 28046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 193513 - 193445
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    |||||||||||| |||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  193513 cacgaatttcaatgattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 193445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 86848 - 86906
Alignment:
Q  251 atgaaatgaaatgaaa-cctattttctctaaagacaagagtttatataggttcatctca 308  Q
    |||||||||||||||| ||||||||||||||| ||||  ||||||||||| || |||||    
T  86848 atgaaatgaaatgaaaacctattttctctaaaaacaatggtttatataggctcttctca 86906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 2716 - 2617
Alignment:
Q  79 aactaagtgattatgcttgaaatttaaccc-cttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||| ||||||| ||||||| |||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||| | ||||||    
T  2716 aactaagagattatgattgaaatctaacccacttacctcaataagcaataattctagcaaaaactttaatttagctcctagaatctctatcccgtcttgg 2617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 11322 - 11393
Alignment:
Q  106 ccccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  11322 ccccttacctcaataagcaataatcttagcaaaagcttcaatttagctcctagaatctctatcacctcttgg 11393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 37873 - 37972
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacc-ccttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||| | ||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  37873 aactaattgattatgattgaactctaacctccttacctcaattagcaaataatcctagctaaagcttcaatttagctcctagaatctctatcacctcttg 37972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 25663 - 25762
Alignment:
Q  79 aactaagtgattatgcttgaaatttaac-cccttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| |||||||| ||||| | |||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  25663 aactaattgattatggttgaactctaactcccttacctcaattagcaactaatcctagccaaagcttcaatttagctcctagaatctctatcacctcttg 25762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 13494 - 13561
Alignment:
Q  109 cttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  13494 cttacctcaattagcgataatcctagcaaaagcttcaatttagctcctagaatctctatcacctcttg 13561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 67828 - 67730
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| || ||||| ||||||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||| ||| ||||||||||||||    
T  67828 aactaattggttatgtttgaaatctaacccccttacctcaattagcaaaaatcctagcaaaagcttcaatttagcacctagaatatctatcacctcttg 67730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 12720 - 12563
Alignment:
Q  22 tcacaataatctcttattcaaat-aagcacttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatttaacccc-ttacctcaat 119  Q
    ||||||||||| ||||| ||||| ||| ||||||||| ||||  ||||| ||||    ||||||||||||||| ||||||| ||||||| ||||||||||    
T  12720 tcacaataatcacttatccaaattaaggacttatgcaaagaattagagaaaagattacaactaagtgattatgattgaaatctaacccccttacctcaat 12621  T
Q  120 tagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
     ||||||||||||| ||||| |||| ||||||| | || |||||||| | ||||||||    
T  12620 aagcaataatcctaacaaaagcttccatttagcccttagaatctctagctcctcttgg 12563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 244694 - 244597
Alignment:
Q  79 aactaagtgattatgcttgaaatttaac-cccttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    ||||||| ||||||| ||||||| ||   ||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  244694 aactaagagattatgattgaaatctagttcccttacctaaataagcaataatcctagcaaaagcttcaatttagctcctagaatctctatcacctctt 244597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 14350 - 14450
Alignment:
Q  78 taactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    ||||||| |||||||| ||||| | ||||||| |||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||| |||||    
T  14350 taactaattgattatgattgaactctaacccccttacctcaattagcaaataatcctagccaaagcttcaatttagctcctagaatctctatcaactctt 14449  T
Q  176 g 176  Q
    |    
T  14450 g 14450  T

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Target: scaffold0017 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 13084 - 13183
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    ||||||| ||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||| ||||| || |||||||| |||||||| | ||||||||    
T  13084 aactaagagattatgattgaaatctaacccccttacctcaataagcaataatcctagcaaaagcttcacttaagctcctagaatctctagctcctcttgg 13183  T

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Target: scaffold0017; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 295
Target Start/End: Original strand, 13259 - 13299
Alignment:
Q  256 atgaaatgaaa-cctattttctctaaagacaagagtttata 295  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  13259 atgaaatgaaaacctattttctctaaagacaagagtttata 13299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 34466 - 34306
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagaga-gaagaaactaactaagtgattatgcttga 98  Q
    ||||||||||||  |||  ||||||||||||| ||||| ||||||||||||||||||||||||  || || ||||  || ||||||  ||||||| ||||    
T  34466 cacgaatttcaacaattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagggaagaagctac-aactaaa-gattatgattga 34369  T
Q  99 aatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaa 160  Q
    ||| ||||||| |||||||||| ||||||||||||||||||| || ||||  |||||||||||    
T  34368 aatctaacccccttacctcaataagcaataatcctagcaaaagctccaataaagctcctaaaa 34306  T

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Target: scaffold0084 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 55215 - 55392
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagagagaagaaacta--actaagtgattatgcttg 97  Q
    ||||||||||||  |||  ||||| ||||||| ||||| |||||||||||||||||||||  |||  || |||||| |||  |||||  ||||||| |||    
T  55215 cacgaatttcaacaattaagttcaaaataatcacttatctcaaataagcacttatgcata--aaattagggaagaagctacaactaaa-gattatgattg 55311  T
Q  98 aaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttgg 177  Q
    |||| ||||||| |||||||||| |||||||||||||| |||| |||||||| |||||||| |||||| | | ||||||||    
T  55312 aaatctaacccccttacctcaataagcaataatcctagaaaaatcttcaattaagctcctagaatctccagctcctcttgg 55392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 2922 - 3086
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttat-tcaaataagcacttatgcatagaaaaagaga-gaagaaactaactaagtgattatgcttga 98  Q
    ||||||||||||  |||  ||||||||||||| ||||| ||||||||||||||||||||||||  || || || |  || |||||| | |||| | ||||    
T  2922 cacgaatttcaacaattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagcgaagacgctac-aactaaat-attacgtttga 3019  T
Q  99 aatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctc 164  Q
    ||| ||||||| |||||||||| | |||||||||||||| || |||||||| |||||||||||||||    
T  3020 aatctaacccccttacctcaataaacaataatcctagcataagcttcaattaagctcctaaaatctc 3086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 30288 - 30380
Alignment:
Q  86 tgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||||| ||||| | ||||||| |||||||||||||||| |||||||||  ||| ||||||||||||||||| ||||||||||||||||||    
T  30288 tgattatgattgaactctaacccccttacctcaattagcaactaatcctagtcaaagcttcaatttagctcctagaatctctatcacctcttg 30380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 22314 - 22413
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaa-taatcctagcaaaaacttcaatttagctcctaaaatctctatcacctcttg 176  Q
    |||||| ||| |||| ||||||| ||||||| |||||||||||||||| |||||||||| ||| |||||||||| || |||  |||||||||||||||||    
T  22314 aactaattgactatgattgaaatctaacccccttacctcaattagcaaataatcctagccaaagcttcaatttatcttctaggatctctatcacctcttg 22413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 348 - 403
Alignment:
Q  4 gaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcata 59  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  348 gaatttcaaagattgggttcacaataatcacttattcaattaagcacttattcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1517 - 1459
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcata 59  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||||||||| ||||    
T  1517 cacgaatttcaaagattgggttcacaataatcatttattcaattaagcacttattcata 1459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 994 - 902
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  994 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42593 - 42685
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  42593 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 42685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 55820 - 55912
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  55820 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 55912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31296 - 31207
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgatt 90  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| |||||    
T  31296 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgatt 31207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 26923 - 26826
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | ||||||| |||||| | ||||||| |||||||||| || ||||||||||||||||| |||| | | ||||||||    
T  26923 aactaattgattatggttgaattctaacccccttaccttagttagcaaaaatcctagcacaagcttcaatttagctcctagaatcaccaccacctctt 26826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41548 - 41637
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgatt 90  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| |||||    
T  41548 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgatt 41637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5893 - 5825
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  5893 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 5825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6099 - 6031
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  6099 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 6031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 80107 - 80195
Alignment:
Q  5 aatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  80107 aatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 80195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 162194 - 162126
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  162194 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 162126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 166280 - 166212
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  166280 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 166212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 5726 - 5823
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||| | ||||||| |||||| | ||||||| |||||||||  || ||||||||||||||||| |||| | | ||||||||    
T  5726 aactaattgattatggttgaattctaacccccttaccttagttagcaaaaatcctagcccaagcttcaatttagctcctagaatcaccaccacctctt 5823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 894 - 797
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||||| ||||||| |||||| | |||| || |||||||||  || |||||||||||||| || |||||| | ||||||||    
T  894 aactaattgattatgattgaaatctaacccccttaccttagttagaaaaaatcctagcccaagcttcaatttagctcatagaatctccaccacctctt 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13402 - 13341
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  13402 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 13341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 2340 - 2437
Alignment:
Q  79 aactaagtgattatgcttgaaatttaacccc-ttacctcaattagcaataatcctagcaaaaacttcaatttagctcctaaaatctctatcacctctt 175  Q
    |||||| |||||||| ||||||| ||||||| |||||| | ||||||| |||||||||  || ||||||||||| ||||| |||| | | ||||||||    
T  2340 aactaattgattatggttgaaatctaacccccttaccttagttagcaaaaatcctagcccaagcttcaatttagttcctagaatcaccaccacctctt 2437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 30336 - 30425
Alignment:
Q  4 gaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||| |||||||  |||||| |||||||  |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  30336 gaatttcaaagatagggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaataattaactaaatgattatg 30425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 130795 - 130856
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  130795 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 130856  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 180749 - 180712
Alignment:
Q  141 cttcaatttagctcctaaaatctctatcacctcttggg 178  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  180749 cttcaatttagctcctagaatctctatcacctcttggg 180712  T

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Target: scaffold0342 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 463 - 393
Alignment:
Q  5 aatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaa 75  Q
    ||||||||| ||||||||||  |||||| |||||||  |||| || |||||||||||| |||||| |||||    
T  463 aatttcaaatattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaagaa 393  T

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Target: scaffold0205 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 8421 - 8471
Alignment:
Q  251 atgaaatgaa-atgaaacc-tattttctctaaagacaagagtttatatagg 299  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  8421 atgaaatgaatatgaaaccctattttctctaaagactagagtttatatagg 8471  T

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Target: scaffold0303 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 4459 - 4402
Alignment:
Q  5 aatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaa 62  Q
    ||||||||||||||||||||  |||||| |||||||  |||| || ||||||||||||    
T  4459 aatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaa 4402  T

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Target: scaffold1518 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1518
Description:

Target: scaffold1518; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 620 - 652
Alignment:
Q  267 cctattttctctaaagacaagagtttatatagg 299  Q
    |||||||||||||||||| ||||||||||||||    
T  620 cctattttctctaaagactagagtttatatagg 652  T

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Target: scaffold0706 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6559 - 6467
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||||||  |||| | | ||||   |||| || |||||||||||| |||||| ||  || ||||||| ||||||||    
T  6559 cacgaatttcaaagattgggttcatgataagcacctattatcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatg 6467  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 17416 - 17352
Alignment:
Q  5 aatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 69  Q
    ||||||||||||||||||||  ||||||  ||||||  |||| || |||||||||||| ||||||    
T  17416 aatttcaaagattgggttcatgataatcaattattctcataatcaattatgcatagaacaagaga 17352  T

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Target: scaffold0175 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15188 - 15240
Alignment:
Q  1 cacgaatttcaaagattgggttcacaataatctcttattcaaataagcactta 53  Q
    ||||||||||||||||||||||||  |||||| |||||||  |||| ||||||    
T  15188 cacgaatttcaaagattgggttcatgataatcacttattcccataatcactta 15240  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 12530 - 12442
Alignment:
Q  5 aatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagagagaagaaactaactaagtgattatg 93  Q
    ||||||||||||||||||||  |||||  |||||||  |||| || |||||||||||| || ||| ||  || ||||||| ||||||||    
T  12530 aatttcaaagattgggttcatgataataacttattcccataatcaattatgcatagaacaaaagaaaaagaattaactaaatgattatg 12442  T

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