View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10392_low_23 (Length: 269)
Name: NF10392_low_23
Description: NF10392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10392_low_23 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 11 - 269
Target Start/End: Complemental strand, 34638579 - 34638321
Alignment:
| Q |
11 |
caaaggtcctaaagaaggagaaaatactttaaacttttaatattaaacatgatatattagtacattgacgacaaatccacattcttgttgtttatttcac |
110 |
Q |
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| T |
34638579 |
caaaggtcctaaagaaggagaaaatactttaaacttttaatattaaacatgatatattagtacattgacgataaatccacattcttgttgtttatttcac |
34638480 |
T |
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| Q |
111 |
atggtcatgctcttacgaagaattactgaacatttcaaaggattcttcatttcaagggaaagcttaagactttctgaaagatccacaggtacttgtgctg |
210 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34638479 |
atggtcatgctcttacgaagaactactgaacatttcaaaggattcttcatttcaagggaaagcttaagactttctgaaagatccacaggtacttgtgctg |
34638380 |
T |
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| Q |
211 |
gaagccacacaaaattatggagaagttgtgctagccagagatgaaccgtggctaagcct |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34638379 |
gaagccacacaaaattatggagaagttgtgctagccagagatgaaccgtggctaagcct |
34638321 |
T |
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