View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10393_low_8 (Length: 250)
Name: NF10393_low_8
Description: NF10393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10393_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 44951965 - 44952201
Alignment:
| Q |
14 |
agggtgaatggctgagttacatggtttataataaaaaatcaagacaaatactaagaagtatacataaaaataaaggatttatggtagtcgtatgttatag |
113 |
Q |
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| T |
44951965 |
agggtgaatggctgagttacatggtgtataataaaaaatcaagacaaatactaagaagtatacataaaaataaatgatttatggtagtcgtatgttatag |
44952064 |
T |
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| Q |
114 |
gacccatcgtgtatagagaagtaagattcatttaagatatacatattgcacatttatcaaatacacatttacttaggaacacgcatgttcacttgatact |
213 |
Q |
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| T |
44952065 |
gacccatcgtgtatagagaagtaagattcacttaagatatacatattgcacatttatcaaatacacatttacttagaaacacgcatgttcacttgatact |
44952164 |
T |
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| Q |
214 |
tctatttcacattttggtaacatttctaacttcagac |
250 |
Q |
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| T |
44952165 |
tctatttcacattttggtaacatttctaacttcagac |
44952201 |
T |
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